Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0016684

Physical Location & Seq

Genomic Coordinates Reverse (-)

58993505 .. 58995286

Gene Structure 1782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G031820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGCATCACTGGCTGTCCAAATAACCCCAATCTCTCACCCAAAAGCTCACACTCACTCCCCAATCTCTCTCATCCCTAAATGCACCTCTCTCACAGAACTCCAGCAAATCCAAGCCTTTTCCATCAAAACCCATCTCCAATATGACTCATCTGTCCTGGCCAAGCTCATCAACTCCTGCACACTCAACCCAACTAGACACTCCATGGACTATGCCCACCACCTGTTCCACCAAATTCCCCACCCGGACATTGTCGTCTTCAACACCATGGCACGTGGTTACTCACGCTCCGATACCCCATTTCGCGCTATTTCACTCTTTTCCCAGGTTCTATCCTCAGGTCTCTTCCCAGATGACTACACATTCCCGGCTCTTCTCAAGGCTTGCGCCGGCTCTAAAGCCTTAGAAGAAGGGAAGCAGTTGCATTGCTATGTTATCAAATATGGAATGCAACTTAACATATTTGTGTGCCCTGCTCTTATAAATATGTACACAGAGTGCGGTGATGTGGATGCAGCTCGCCGGGTTTTTGATAAGATACTGGACCCTTGTGTTGTTGTGCATAATGCTATGATCACAGGGTATGCTAGAAACAGTCGCCCCAATGAGGCATTGGCATTGTTTCGAGAGTTGCAAGCGAGTGGTCTTAAGCCAACCGATGTTACTATGCTTAGTGCTCTTTCGTCGTGCGCTTTGTTAGGTGCATTGGACTTGGGGAAGTGGATTCATGAGTATGTAAAGAAGAATGGGTTTGATAGATATGTTAAAGTGAACACTGCATTAATAGATATGTATTCAAAGTGTGGTAGCCTGATGGATGCAGTGTCTGTGTTTGAGAACATGAGTGTGAAAGACACACAGGCTTGGTCTGCAATGATTGTGGCGTATGCAACACATGGGAATGTTTCCAAAGCTATATCGATGTTTGAAGAGATGAAGAAGGCACGAATTCGACCTGATGAGATCACATTTCTGGGTCTCTTATATGCGTGTAGTCATGCTGGATTAGTTGAGGAGGGTTGCAAGTATTTCTACAGCATGAGTGAGAACTATGGGATTATACCCAGGATTAAGCATTATGGGTGTGTGGTGGATTTGCTAGGTCGGGCTGGACGTTTAGGGGAGGCTTACAAGTTCATAGTTGAGCTACCAATTAAGCCTACGCCTATAATCTGGCGAACATTGTTAGCTGCTTGTTGCAGTCATGGTGATGTAGACATGGGGATGCGGGTGCTTGAGCGAGTTTTTGAGTTAGATGACTCTCATGGTGGGGATTATGTGATCATATCTAACTTGTGTGCAAGAACAGGAAGATGGGAGGATGTTGTTTACTTGAGGAAACTGATGAAAGACAGAGGCATTGTAAAGATTCCCGGGTGTAGCGCCATAGAGATGAACAATGTAGTGCATGAATTCTTCTCTGGGGATGGCGAGCGTTCTGTTTCCAAAGTACTGCATCGGGCAGTTGATGAGTTGATTGAAGAATTAAAGCTGGCCGGATATGTTCCAGATACTTCTTTAGTATTTCATTCTGACATGGATGATAGAGATAGAGAGCTTTCTCTTAGATATCATAGTGAGAAATTAGCCATTACTTATGGGCTCTTAAACACAGCTGCTGGGACAACAATTCGAGTTGTGAAGAACCTTAGGGTATGTGGGGATTGCCACTCTGCTGCTAAATACATATCATTGATCTTTAATAGACAAATAGTTCTTAGAGATGTTCAACGGTTCCATCATTTCAGAGACGGCAAGTGTTCTTGTGGAGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

593

Amino Acids

66.43

Weight (kDa)

7.79

Isoelectric Point (pI)

31.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	82 - 130	3.7e-07	PPR repeat family
PPR_2	PF13041	183 - 230	9.6e-09	PPR repeat family
PPR	PF01535	186 - 216	7.2e-06	PPR repeat
PPR_2	PF13041	285 - 332	2.1e-10	PPR repeat family
PPR	PF01535	288 - 316	1.9e-06	PPR repeat
E_motif	PF20431	402 - 464	3.9e-16	E motif
DYW_deaminase	PF14432	500 - 593	1.2e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02980 AT5G66520
fragaria_vesca	FvH4_4g31300
malus_domestica	MD13G1071700.v1.1
prunus_persica	Prupe.1G275200_v2.0.a1
pyrus_communis	pycom13g06430
rosa_chinensis	RchiOBHm_Chr4g0439791
rosa_laevigata	RLG00000006238
rosa_multiflora	Rmu_sc0010226.1_g000006 Rmu_ssc0000029.1_g000006
rosa_roxburghii	Rroxscaffold_5G00380690
rosa_rugosa	Rorug04G0321400
rosa_samantha	Rh4BG384700
rosa_wichuraiana	Rw4G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	482
AasI	GACNNNNNNGTC	2 cut(s)	152, 254
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	1 cut(s)	306
AciI	CCGC	2 cut(s)	501, 1228
AcoI	YGGCCR	2 cut(s)	159, 1494
AcsI	RAATTY	3 cut(s)	234, 948, 1412
AcvI	CACGTG	1 cut(s)	275
AdeI	CACNNNGTG	1 cut(s)	498
AfaI	GTAC	2 cut(s)	491, 1452
AfiI	CCNNNNNNNGG	1 cut(s)	607
AflII	CTTAAG	1 cut(s)	647
AgsI	TTSAA	5 cut(s)	262, 798, 929, 1481, 1730
AjnI	CCWGG	3 cut(s)	156, 324, 1064
AluBI	AGCT	9 cut(s)	47, 166, 518, 914, 1147, 1190, 1492, 1558, 1616
AluI	AGCT	9 cut(s)	47, 166, 518, 914, 1147, 1190, 1492, 1558, 1616
Alw21I	GWGCWC	1 cut(s)	679
Alw26I	GTCTC	4 cut(s)	347, 983, 1743, 1764
AlwNI	CAGNNNCTG	2 cut(s)	827, 1619
Ama87I	CYCGRG	1 cut(s)	1373
AoxI	GGCC	2 cut(s)	159, 1494
ApeKI	GCWGC	4 cut(s)	515, 1190, 1616, 1676
ApoI	RAATTY	3 cut(s)	234, 948, 1412
AseI	ATTAAT	1 cut(s)	782
AspLEI	GCGC	4 cut(s)	308, 389, 692, 1385
AspS9I	GGNCC	1 cut(s)	544
AsuC2I	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
AsuHPI	GGTGA	3 cut(s)	29, 515, 1220
AvaI	CYCGRG	1 cut(s)	1373
AvaII	GGWCC	1 cut(s)	544
AxyI	CCTNAGG	2 cut(s)	337, 1649
BaeGI	GKGCMC	1 cut(s)	473
BalI	TGGCCA	1 cut(s)	161
BanII	GRGCYC	1 cut(s)	1605
BbrPI	CACGTG	1 cut(s)	275
BbsI	GAAGAC	1 cut(s)	250
Bbv12I	GWGCWC	1 cut(s)	679
BbvI	GCAGC	4 cut(s)	527, 1177, 1603, 1663
BccI	CCATC	6 cut(s)	131, 141, 808, 1308, 1421, 1746
BceAI	ACGGC	1 cut(s)	1768
BciT130I	CCWGG	3 cut(s)	158, 326, 1066
BclI	TGATCA	2 cut(s)	573, 1281
BcnI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
BcoDI	GTCTC	4 cut(s)	347, 983, 1743, 1764
BfaI	CTAG	3 cut(s)	195, 588, 1100
BfmI	CTRYAG	1 cut(s)	1033
BfoI	RGCGCY	1 cut(s)	1386
BfrI	CTTAAG	1 cut(s)	647
BisI	GCNGC	4 cut(s)	516, 1191, 1617, 1677
BlsI	GCNGC	4 cut(s)	517, 1192, 1618, 1678
BmcAI	AGTACT	1 cut(s)	1452
Bme1390I	CCNGG	8 cut(s)	158, 245, 326, 368, 524, 1066, 1374, 1375
Bme18I	GGWCC	1 cut(s)	544
BmeT110I	CYCGRG	1 cut(s)	1373
BmgT120I	GGNCC	1 cut(s)	544
BmiI	GGNNCC	2 cut(s)	546, 1736
BmrFI	CCNGG	8 cut(s)	158, 245, 326, 368, 524, 1066, 1374, 1375
BmsI	GCATC	5 cut(s)	14, 502, 808, 1215, 1465
BpiI	GAAGAC	1 cut(s)	250
BpmI	CTGGAG	1 cut(s)	86
BpuEI	CTTGAG	3 cut(s)	362, 1256, 1354
BpuMI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
Bsa29I	ATCGAT	1 cut(s)	920
BsaAI	YACGTR	1 cut(s)	275
BsaI	GGTCTC	2 cut(s)	347, 983
BsaJI	CCNNGG	5 cut(s)	204, 267, 324, 1064, 1373
BsaXI	ACNNNNNCTCC	4 cut(s)	41, 71, 272, 302
Bsc4I	CCNNNNNNNGG	1 cut(s)	607
Bse118I	RCCGGY	1 cut(s)	389
Bse1I	ACTGG	2 cut(s)	15, 546
Bse21I	CCTNAGG	2 cut(s)	337, 1649
Bse3DI	GCAATG	2 cut(s)	424, 879
BseBI	CCWGG	3 cut(s)	158, 326, 1066
BseCI	ATCGAT	1 cut(s)	920
BseDI	CCNNGG	5 cut(s)	204, 267, 324, 1064, 1373
BseGI	GGATG	7 cut(s)	72, 517, 823, 1230, 1327, 1432, 1546
BseLI	CCNNNNNNNGG	1 cut(s)	607
BseMI	GCAATG	2 cut(s)	424, 879
BseMII	CTCAG	1 cut(s)	351
BseNI	ACTGG	2 cut(s)	15, 546
BseRI	GAGGAG	1 cut(s)	1028
BseSI	GKGCMC	1 cut(s)	473
BseXI	GCAGC	4 cut(s)	527, 1177, 1603, 1663
BseYI	CCCAGC	1 cut(s)	1619
BsgI	GTGCAG	1 cut(s)	163
Bsh1236I	CGCG	1 cut(s)	306
BshFI	GGCC	2 cut(s)	161, 1496
BshVI	ATCGAT	1 cut(s)	920
BsiHKAI	GWGCWC	1 cut(s)	679
BsiHKCI	CYCGRG	1 cut(s)	1373
BsiSI	CCGG	6 cut(s)	245, 368, 390, 523, 1374, 1497
BslFI	GGGAC	1 cut(s)	1636
BslI	CCNNNNNNNGG	1 cut(s)	607
BsmAI	GTCTC	4 cut(s)	347, 983, 1743, 1764
BsmBI	CGTCTC	1 cut(s)	1743
BsmFI	GGGAC	1 cut(s)	1636
BsmI	GAATGC	1 cut(s)	453
BsnI	GGCC	2 cut(s)	161, 1496
Bso31I	GGTCTC	2 cut(s)	347, 983
BsoBI	CYCGRG	1 cut(s)	1373
Bsp1286I	GDGCHC	3 cut(s)	473, 679, 1605
Bsp1407I	TGTACA	1 cut(s)	489
Bsp143I	GATC	4 cut(s)	573, 963, 1281, 1695
Bsp19I	CCATGG	2 cut(s)	204, 267
BspACI	CCGC	2 cut(s)	501, 1228
BspANI	GGCC	2 cut(s)	161, 1496
BspCNI	CTCAG	1 cut(s)	350
BspDI	ATCGAT	1 cut(s)	920
BspFNI	CGCG	1 cut(s)	306
BspHI	TCATGA	1 cut(s)	727
BspLI	GGNNCC	2 cut(s)	546, 1736
BspQI	GCTCTTC	1 cut(s)	378
BspTI	CTTAAG	1 cut(s)	647
BspTNI	GGTCTC	2 cut(s)	347, 983
BsrDI	GCAATG	2 cut(s)	424, 879
BsrFI	RCCGGY	1 cut(s)	389
BsrGI	TGTACA	1 cut(s)	489
BsrI	ACTGG	2 cut(s)	15, 546
BssAI	RCCGGY	1 cut(s)	389
BssECI	CCNNGG	5 cut(s)	204, 267, 324, 1064, 1373
BssMI	GATC	4 cut(s)	573, 963, 1281, 1695
BssT1I	CCWWGG	2 cut(s)	204, 267
Bst2UI	CCWGG	3 cut(s)	158, 326, 1066
Bst4CI	ACNGT	2 cut(s)	596, 1734
Bst6I	CTCTTC	3 cut(s)	350, 378, 924
BstAFI	CTTAAG	1 cut(s)	647
BstAUI	TGTACA	1 cut(s)	489
BstBAI	YACGTR	1 cut(s)	275
BstC8I	GCNNGC	6 cut(s)	385, 391, 520, 636, 1433, 1494
BstDEI	CTNAG	6 cut(s)	337, 403, 671, 1565, 1649, 1718
BstDSI	CCRYGG	2 cut(s)	204, 267
BstF5I	GGATG	7 cut(s)	72, 517, 823, 1230, 1327, 1432, 1546
BstFNI	CGCG	1 cut(s)	306
BstH2I	RGCGCY	1 cut(s)	1386
BstHHI	GCGC	4 cut(s)	308, 389, 692, 1385
BstKTI	GATC	4 cut(s)	576, 966, 1284, 1698
BstMAI	GTCTC	4 cut(s)	347, 983, 1743, 1764
BstMBI	GATC	4 cut(s)	573, 963, 1281, 1695
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 869
BstNI	CCWGG	3 cut(s)	158, 326, 1066
BstSCI	CCNGG	8 cut(s)	156, 243, 324, 366, 522, 1064, 1372, 1373
BstSFI	CTRYAG	1 cut(s)	1033
BstSLI	GKGCMC	1 cut(s)	473
BstUI	CGCG	1 cut(s)	306
BstV1I	GCAGC	4 cut(s)	527, 1177, 1603, 1663
BstV2I	GAAGAC	1 cut(s)	250
Bsu15I	ATCGAT	1 cut(s)	920
Bsu36I	CCTNAGG	2 cut(s)	337, 1649
BsuRI	GGCC	2 cut(s)	161, 1496
BsuTUI	ATCGAT	1 cut(s)	920
BtgI	CCRYGG	2 cut(s)	204, 267
BtsCI	GGATG	7 cut(s)	72, 517, 823, 1230, 1327, 1432, 1546
BtsI	GCAGTG	2 cut(s)	774, 828
BtsIMutI	CAGTG	3 cut(s)	8, 774, 828
Cac8I	GCNNGC	6 cut(s)	385, 391, 520, 636, 1433, 1494
CaiI	CAGNNNCTG	2 cut(s)	827, 1619
CciI	TCATGA	1 cut(s)	727
CfoI	GCGC	4 cut(s)	308, 389, 692, 1385
Cfr10I	RCCGGY	1 cut(s)	389
Cfr13I	GGNCC	1 cut(s)	544
Cfr9I	CCCGGG	1 cut(s)	1373
ClaI	ATCGAT	1 cut(s)	920
Csp6I	GTAC	2 cut(s)	490, 1451
CspCI	CAANNNNNGTGG	2 cut(s)	861, 896
CviQI	GTAC	2 cut(s)	490, 1451
DdeI	CTNAG	6 cut(s)	337, 403, 671, 1565, 1649, 1718
DpnI	GATC	4 cut(s)	575, 965, 1283, 1697
DpnII	GATC	4 cut(s)	573, 963, 1281, 1695
DraIII	CACNNNGTG	1 cut(s)	498
DrdI	GACNNNNNNGTC	2 cut(s)	152, 254
DseDI	GACNNNNNNGTC	2 cut(s)	152, 254
EaeI	YGGCCR	2 cut(s)	159, 1494
Eam1104I	CTCTTC	3 cut(s)	350, 378, 924
EarI	CTCTTC	3 cut(s)	350, 378, 924
Eco130I	CCWWGG	2 cut(s)	204, 267
Eco24I	GRGCYC	1 cut(s)	1605
Eco31I	GGTCTC	2 cut(s)	347, 983
Eco32I	GATATC	1 cut(s)	1571
Eco47I	GGWCC	1 cut(s)	544
Eco72I	CACGTG	1 cut(s)	275
Eco81I	CCTNAGG	2 cut(s)	337, 1649
Eco88I	CYCGRG	1 cut(s)	1373
EcoRI	GAATTC	2 cut(s)	948, 1412
EcoRII	CCWGG	3 cut(s)	156, 324, 1064
EcoRV	GATATC	1 cut(s)	1571
EcoT14I	CCWWGG	2 cut(s)	204, 267
EcoT38I	GRGCYC	1 cut(s)	1605
ErhI	CCWWGG	2 cut(s)	204, 267
Esp3I	CGTCTC	1 cut(s)	1743
FaqI	GGGAC	1 cut(s)	1636
FauI	CCCGC	1 cut(s)	1221
FbaI	TGATCA	2 cut(s)	573, 1281
FblI	GTMKAC	1 cut(s)	1215
Fnu4HI	GCNGC	4 cut(s)	516, 1191, 1617, 1677
FokI	GGATG	7 cut(s)	59, 524, 830, 1237, 1334, 1439, 1553
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	4 cut(s)	516, 1191, 1617, 1677
FspBI	CTAG	3 cut(s)	195, 588, 1100
GlaI	GCGC	4 cut(s)	307, 388, 691, 1384
GluI	GCNGC	4 cut(s)	516, 1191, 1617, 1677
GsaI	CCCAGC	1 cut(s)	1623
GsuI	CTGGAG	1 cut(s)	86
HaeII	RGCGCY	1 cut(s)	1386
HaeIII	GGCC	2 cut(s)	161, 1496
HapII	CCGG	6 cut(s)	245, 368, 390, 523, 1374, 1497
HhaI	GCGC	4 cut(s)	308, 389, 692, 1385
Hin6I	GCGC	4 cut(s)	306, 387, 690, 1383
HinP1I	GCGC	4 cut(s)	306, 387, 690, 1383
HinfI	GANTC	4 cut(s)	146, 724, 1259, 1369
HpaII	CCGG	6 cut(s)	245, 368, 390, 523, 1374, 1497
HphI	GGTGA	3 cut(s)	29, 515, 1220
Hpy166II	GTNNAC	4 cut(s)	492, 772, 1216, 1330
Hpy188I	TCNGA	3 cut(s)	292, 1534, 1748
Hpy188III	TCNNGA	3 cut(s)	626, 728, 1508
Hpy8I	GTNNAC	4 cut(s)	492, 772, 1216, 1330
Hpy99I	CGWCG	1 cut(s)	688
HpyAV	CCTTC	2 cut(s)	404, 934
HpyCH4III	ACNGT	2 cut(s)	596, 1734
HpyCH4IV	ACGT	2 cut(s)	274, 1114
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 869
HpyF3I	CTNAG	6 cut(s)	337, 403, 671, 1565, 1649, 1718
HpySE526I	ACGT	2 cut(s)	274, 1114
HspAI	GCGC	4 cut(s)	306, 387, 690, 1383
KroI	GCCGGC	1 cut(s)	389
KroNI	GCCGGC	1 cut(s)	391
Ksp22I	TGATCA	2 cut(s)	573, 1281
Kzo9I	GATC	4 cut(s)	573, 963, 1281, 1695
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	1 cut(s)	293
Lsp1109I	GCAGC	4 cut(s)	527, 1177, 1603, 1663
LweI	GCATC	5 cut(s)	14, 502, 808, 1215, 1465
MaeI	CTAG	3 cut(s)	195, 588, 1100
MaeII	ACGT	2 cut(s)	274, 1114
MaeIII	GTNAC	2 cut(s)	278, 661
MalI	GATC	4 cut(s)	575, 965, 1283, 1697
MboI	GATC	4 cut(s)	573, 963, 1281, 1695
MhlI	GDGCHC	3 cut(s)	473, 679, 1605
MlsI	TGGCCA	1 cut(s)	161
MluCI	AATT	7 cut(s)	234, 948, 1152, 1412, 1484, 1583, 1629
MluNI	TGGCCA	1 cut(s)	161
MlyI	GAGTC	2 cut(s)	140, 1253
MnlI	CCTC	9 cut(s)	97, 346, 601, 1006, 1009, 1117, 1312, 1329, 1349
Mox20I	TGGCCA	1 cut(s)	161
MroNI	GCCGGC	1 cut(s)	389
MscI	TGGCCA	1 cut(s)	161
MseI	TTAA	9 cut(s)	456, 648, 765, 782, 1071, 1155, 1487, 1607, 1701
MslI	CAYNNNNRTG	8 cut(s)	429, 464, 732, 845, 900, 1209, 1223, 1391
Msp20I	TGGCCA	1 cut(s)	161
MspA1I	CMGCKG	1 cut(s)	1616
MspCI	CTTAAG	1 cut(s)	647
MspI	CCGG	6 cut(s)	245, 368, 390, 523, 1374, 1497
MspR9I	CCNGG	8 cut(s)	158, 245, 326, 368, 524, 1066, 1374, 1375
Mva1269I	GAATGC	1 cut(s)	453
MvaI	CCWGG	3 cut(s)	158, 326, 1066
MvnI	CGCG	1 cut(s)	306
MwoI	GCNNNNNNNGC	2 cut(s)	11, 869
NaeI	GCCGGC	1 cut(s)	391
NciI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
NcoI	CCATGG	2 cut(s)	204, 267
NdeII	GATC	4 cut(s)	573, 963, 1281, 1695
NgoMIV	GCCGGC	1 cut(s)	389
NlaIV	GGNNCC	2 cut(s)	546, 1736
PagI	TCATGA	1 cut(s)	727
PciSI	GCTCTTC	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	453
PdiI	GCCGGC	1 cut(s)	391
PfeI	GAWTC	2 cut(s)	724, 1369
PflFI	GACNNNGTC	1 cut(s)	251
PkrI	GCNGC	4 cut(s)	517, 1192, 1618, 1678
PleI	GAGTC	2 cut(s)	140, 1253
PmaCI	CACGTG	1 cut(s)	275
PmlI	CACGTG	1 cut(s)	275
PpsI	GAGTC	2 cut(s)	140, 1253
Ppu21I	YACGTR	1 cut(s)	275
PshBI	ATTAAT	1 cut(s)	782
PsiI	TTATAA	1 cut(s)	482
Psp6I	CCWGG	3 cut(s)	156, 324, 1064
PspCI	CACGTG	1 cut(s)	275
PspFI	CCCAGC	1 cut(s)	1619
PspGI	CCWGG	3 cut(s)	156, 324, 1064
PspN4I	GGNNCC	2 cut(s)	546, 1736
PspPI	GGNCC	1 cut(s)	544
PstNI	CAGNNNCTG	2 cut(s)	827, 1619
PsyI	GACNNNGTC	1 cut(s)	251
PvuII	CAGCTG	1 cut(s)	1616
RsaI	GTAC	2 cut(s)	491, 1452
RsaNI	GTAC	2 cut(s)	490, 1451
RseI	CAYNNNNRTG	8 cut(s)	429, 464, 732, 845, 900, 1209, 1223, 1391
SapI	GCTCTTC	1 cut(s)	378
SaqAI	TTAA	9 cut(s)	456, 648, 765, 782, 1071, 1155, 1487, 1607, 1701
SatI	GCNGC	4 cut(s)	516, 1191, 1617, 1677
Sau3AI	GATC	4 cut(s)	573, 963, 1281, 1695
Sau96I	GGNCC	1 cut(s)	544
ScaI	AGTACT	1 cut(s)	1452
SchI	GAGTC	2 cut(s)	140, 1253
ScrFI	CCNGG	8 cut(s)	158, 245, 326, 368, 524, 1066, 1374, 1375
SduI	GDGCHC	3 cut(s)	473, 679, 1605
SfaNI	GCATC	5 cut(s)	14, 502, 808, 1215, 1465
SfcI	CTRYAG	1 cut(s)	1033
SinI	GGWCC	1 cut(s)	544
SmaI	CCCGGG	1 cut(s)	1375
SmiMI	CAYNNNNRTG	8 cut(s)	429, 464, 732, 845, 900, 1209, 1223, 1391
SmlI	CTYRAG	4 cut(s)	377, 647, 1235, 1333
SmoI	CTYRAG	4 cut(s)	377, 647, 1235, 1333
Sse9I	AATT	7 cut(s)	234, 948, 1152, 1412, 1484, 1583, 1629
SsiI	CCGC	2 cut(s)	501, 1228
SspMI	CTAG	3 cut(s)	195, 588, 1100
StyD4I	CCNGG	8 cut(s)	156, 243, 324, 366, 522, 1064, 1372, 1373
StyI	CCWWGG	2 cut(s)	204, 267
TaaI	ACNGT	2 cut(s)	596, 1734
TaiI	ACGT	2 cut(s)	277, 1117
TaqI	TCGA	4 cut(s)	625, 920, 952, 1633
TasI	AATT	7 cut(s)	234, 948, 1152, 1412, 1484, 1583, 1629
TatI	WGTACW	2 cut(s)	489, 1450
TfiI	GAWTC	2 cut(s)	724, 1369
Tru1I	TTAA	9 cut(s)	456, 648, 765, 782, 1071, 1155, 1487, 1607, 1701
Tru9I	TTAA	9 cut(s)	456, 648, 765, 782, 1071, 1155, 1487, 1607, 1701
TscAI	CASTG	3 cut(s)	15, 781, 828
TseI	GCWGC	4 cut(s)	515, 1190, 1616, 1676
TspDTI	ATGAA	7 cut(s)	716, 950, 1126, 1361, 1409, 1425, 1517
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	3 cut(s)	15, 781, 828
Tth111I	GACNNNGTC	1 cut(s)	251
Vha464I	CTTAAG	1 cut(s)	647
VpaK11BI	GGWCC	1 cut(s)	544
VspI	ATTAAT	1 cut(s)	782
XapI	RAATTY	3 cut(s)	234, 948, 1412
XcmI	CCANNNNNNNNNTGG	1 cut(s)	610
XmaI	CCCGGG	1 cut(s)	1373
XmiI	GTMKAC	1 cut(s)	1215
XspI	CTAG	3 cut(s)	195, 588, 1100
ZrmI	AGTACT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.