Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010226.1

Orthogroup ID

OG0016684

Physical Location & Seq

Genomic Coordinates Forward (+)

19376 .. 31353

Gene Structure 11978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010226.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

atggcatcactggctgtccaaataaccccaatctctcacccaaaagctcacactcactccccaatctctctcatccctaaatgcacctctctcacagaactccagcaaatccaagccttttccatcaaaacccatctccaatatgacttatctgtcctggccaagctcatcaactcctgcacactcaacccaactagacactccatggactatgcccaccacctgttccaccaaattccccacccggacattgtcgtcttcaacaccatggcacgtggttactcacgctccgataccccatttcgcgctatttcactcttttcccaggttctatcctcaggtctcttcccagatgactacacattcccggctcttctcaaggcttgcgccggctctaaagccttagaagaagggaagcagttgcattgctatgttatcaaatatggaatgcaacttaacatatttgtgtgccctgctcttataaatatgtacactgagtgcggtgatgtggatgcagctcgccgggtttttgataagatactggacccttgtgttgttgtgcataatgctatgatcacagggtatgctagaaacagtcggcccaatgaggcattggcattgtttcgagagttgcaagcgagtggtcttaagccaaccgatgttactatgcttagtgctctttcgtcgtgcgctttgttaggtgcattggacttggggaagtggattcatgagtatgttaagaagaataggtttgatagatatgttaaagtgaacactgcattaatagatatgtattcaaagtgtgggagcctgaaggatgcagtgtctgtgtttgagaacacgagtgtgaaagacacacaggcttggtctgcaatgattgtggcgtatgcaacacatgggaatgtttccaaagctatatcgatgtttgaagagatgaagaaggcacgaattcgacctgatgagatcacatttctgggtctcttatatgcgtgtagtcatgctggattagttgaggagggttgcaagtatttctacagcatgagtgagaactatgggattatacccaggattaagcattatgggtgtgtggtggatttgctaggtcgggctggacgtttaggggaggcttacaagttcatagtggagctaccaattaagcctacgcctataatctggcgaacattgttatctgcttgttgcagtcatggtgatgtagacatggggatgcgggtgcttgagcgaatttttgagttagatgactctcatggtggggattatgtgatcatatctaacttgtgtgcaagaacaggaagatgggaggatgttgattacttgaggaaactgatgaaagacagaggtattgtaaaaattcccgggtgtagcgccatagagatgaacaatgtagtgcatgaattcttctctggagatggcaagcgttctgtttccaaagtactgcgtcgggcagttgatgagttgattgaagaattaaagctggccggatatgttccagatacttcttttgtatttcattctgacatggatgataaagatagagagctttctcttagatatcatagtgagaaattagccattacttatgggctcttaaacacagctgctgggacaacaattcgagttgtgaagaaccttagggtatgtggggattgccactctgctgctaaatacatatcattgatctttaatagacaaatagttcttagagatgttcaacgtggccaggatcctacggtggccctcagcacaatatttgctatccaactacaggaaaacctgcacaaagtttcattatcgggggctttcgatcggccaggttttaacaatggttcaatcccaacctactgcgatcccaacaaccccttcaatgaaacaaagtttgttagtgccgatgatgataatgcaggtgtcagggataatcgacgatttgcaaaaatattggccattggctggcctgcccgagcagcaacgccttcaaatcccagaaacctccgcagctacagtaacgtgctacagtacttccgactgctacagtaccgctgctacagtcttccggcgacttttccgacaactttccggctgacttccggcgacttttctggacaacttttcgaaattcctaatttcttggaagcgattacgctaagaaatttcatatgttttcgtggtagcctatttcgctccgaaactaaccctaatttcttgttctctttcaagatgagtaacctgaacaaattggactttgctccattgggaacaactggctctggatatcacaggtgggttcgtgatatccgccagcatctcaaggctgatagaatcctggatatgattctcgagcctagccaggacgtgctaactgttgagcaagctcaagctttggaagcaaatagagcagccttagaggcaaataaggcgaaagccatcatcctaatgactcgtcatatggatgattcgctccagtacgagtatatgaatgaagaagaccccagaaggctgtgggtctcactcgaagaaagatttggcaacgtccgtgactccttgcttcctgacctagaagtgagatggcatagcctccgcttctgtgatttcaagtcagttcttgactataactcggaagcacttcgcattaaatccttaatggaattctgtgataaagagatcacagatgcgatgttgattgagaagactatctctaccttccccatctctgcattgatggttgctaagaactatcgaatcgatgtaaatgcaagacggatcacaaggtttcatgagctcattggagctataaatgtcgctgaaaagcatgaaaatatccttgtgaagaactataattcgagatccgtggaaacagaacatattccggaatccaattataagctctatgaaacttacactagtgtacatgagacgtgggatagaaactctatcataattgatgatgtagttacgcattttgttgcgtatgagtttgctgagtctgatgatatcgaaccacgctccgttgatgaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

1010

Amino Acids

114.55

Weight (kDa)

6.69

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02980 AT5G66520
fragaria_vesca	FvH4_4g31300
malus_domestica	MD13G1071700.v1.1
prunus_persica	Prupe.1G275200_v2.0.a1
pyrus_communis	pycom13g06430
rosa_chinensis	RchiOBHm_Chr4g0439791
rosa_laevigata	RLG00000006238
rosa_multiflora	Rmu_sc0010226.1_g000006 Rmu_ssc0000029.1_g000006
rosa_roxburghii	Rroxscaffold_5G00380690
rosa_rugosa	Rorug04G0321400
rosa_samantha	Rh4BG384700
rosa_wichuraiana	Rw4G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	482, 2895
AarI	CACCTGC	1 cut(s)	1910
AasI	GACNNNNNNGTC	2 cut(s)	152, 254
Acc36I	ACCTGC	2 cut(s)	1800, 1910
AccB7I	CCANNNNNTGG	1 cut(s)	1965
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	1 cut(s)	306
AccIII	TCCGGA	1 cut(s)	2881
AciI	CCGC	6 cut(s)	501, 1228, 2008, 2053, 2311, 2593
AclWI	GGATC	5 cut(s)	1736, 1749, 1859, 2783, 2853
AcoI	YGGCCR	5 cut(s)	159, 1494, 1735, 1826, 1956
AcsI	RAATTY	8 cut(s)	234, 948, 1242, 1368, 1412, 2130, 2164, 2660
AcuI	CTGAAG	1 cut(s)	833
AcvI	CACGTG	1 cut(s)	275
AdeI	CACNNNGTG	1 cut(s)	498
AfaI	GTAC	6 cut(s)	491, 1452, 2033, 2051, 2480, 2922
AfiI	CCNNNNNNNGG	2 cut(s)	1783, 1965
AflII	CTTAAG	1 cut(s)	647
AhlI	ACTAGT	1 cut(s)	2915
AjiI	CACGTC	2 cut(s)	2368, 2931
AjnI	CCWGG	7 cut(s)	156, 324, 1064, 1737, 1828, 2337, 2361
AjuI	GAANNNNNNNTTGG	4 cut(s)	1862, 1894, 2520, 2552
AleI	CACNNNNGTG	1 cut(s)	845
Alw21I	GWGCWC	2 cut(s)	679, 2796
Alw26I	GTCTC	4 cut(s)	347, 983, 2524, 2921
AlwI	GGATC	5 cut(s)	1736, 1749, 1859, 2783, 2853
AlwNI	CAGNNNCTG	2 cut(s)	827, 1619
Ama87I	CYCGRG	3 cut(s)	1373, 1974, 2351
Aor13HI	TCCGGA	1 cut(s)	2881
AoxI	GGCC	8 cut(s)	159, 599, 1494, 1735, 1752, 1826, 1956, 1967
ApeKI	GCWGC	7 cut(s)	515, 1616, 1676, 1979, 2010, 2055, 2411
ApoI	RAATTY	8 cut(s)	234, 948, 1242, 1368, 1412, 2130, 2164, 2660
AseI	ATTAAT	1 cut(s)	782
Asp700I	GAANNNNTTC	2 cut(s)	2637, 2877
AspLEI	GCGC	4 cut(s)	308, 389, 692, 1385
AspS9I	GGNCC	3 cut(s)	544, 600, 1753
AsuC2I	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
AsuHPI	GGTGA	3 cut(s)	29, 515, 1220
AsuII	TTCGAA	1 cut(s)	2127
AvaI	CYCGRG	3 cut(s)	1373, 1974, 2351
AvaII	GGWCC	1 cut(s)	544
AxyI	CCTNAGG	2 cut(s)	337, 1649
BaeGI	GKGCMC	1 cut(s)	473
BalI	TGGCCA	3 cut(s)	161, 1737, 1958
BamHI	GGATCC	1 cut(s)	1741
BanII	GRGCYC	2 cut(s)	1605, 2796
BauI	CACGAG	1 cut(s)	841
BbrPI	CACGTG	1 cut(s)	275
BbsI	GAAGAC	4 cut(s)	250, 2057, 2505, 2708
Bbv12I	GWGCWC	2 cut(s)	679, 2796
BbvCI	CCTCAGC	1 cut(s)	1757
BbvI	GCAGC	7 cut(s)	527, 1603, 1663, 1991, 2022, 2042, 2423
BccI	CCATC	8 cut(s)	131, 141, 1308, 1421, 2447, 2574, 2728, 2729
BcgI	CGANNNNNNTGC	2 cut(s)	2747, 2781
BciT130I	CCWGG	7 cut(s)	158, 326, 1066, 1739, 1830, 2339, 2363
BclI	TGATCA	2 cut(s)	573, 1281
BcnI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
BcoDI	GTCTC	4 cut(s)	347, 983, 2524, 2921
BcuI	ACTAGT	1 cut(s)	2915
BfaI	CTAG	6 cut(s)	195, 588, 1100, 2358, 2570, 2916
BfmI	CTRYAG	6 cut(s)	1033, 1781, 2014, 2027, 2045, 2059
BfoI	RGCGCY	1 cut(s)	1386
BfrI	CTTAAG	1 cut(s)	647
BfuAI	ACCTGC	2 cut(s)	1800, 1910
BglI	GCCNNNNNGGC	1 cut(s)	2420
BisI	GCNGC	7 cut(s)	516, 1617, 1677, 1980, 2011, 2056, 2412
BlsI	GCNGC	7 cut(s)	517, 1618, 1678, 1981, 2012, 2057, 2413
BmcAI	AGTACT	2 cut(s)	1452, 2033
Bme18I	GGWCC	1 cut(s)	544
BmeT110I	CYCGRG	3 cut(s)	1373, 1974, 2351
BmgBI	CACGTC	2 cut(s)	2368, 2931
BmgT120I	GGNCC	3 cut(s)	544, 600, 1753
BmiI	GGNNCC	3 cut(s)	546, 809, 1743
BmsI	GCATC	6 cut(s)	14, 502, 808, 1215, 2326, 2674
BpiI	GAAGAC	4 cut(s)	250, 2057, 2505, 2708
BpmI	CTGGAG	3 cut(s)	86, 1443, 2459
Bpu10I	CCTNAGC	1 cut(s)	1757
Bpu14I	TTCGAA	1 cut(s)	2127
BpuEI	CTTGAG	5 cut(s)	362, 1256, 1354, 2306, 2373
BpuMI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
Bsa29I	ATCGAT	2 cut(s)	920, 2757
BsaAI	YACGTR	1 cut(s)	275
BsaI	GGTCTC	3 cut(s)	347, 983, 2524
BsaJI	CCNNGG	6 cut(s)	204, 267, 324, 1064, 1373, 2862
BsaWI	WCCGGW	1 cut(s)	2881
BsaXI	ACNNNNNCTCC	4 cut(s)	41, 71, 272, 302
Bsc4I	CCNNNNNNNGG	2 cut(s)	1783, 1965
Bse118I	RCCGGY	1 cut(s)	389
Bse1I	ACTGG	4 cut(s)	15, 546, 2281, 2476
Bse21I	CCTNAGG	2 cut(s)	337, 1649
Bse3DI	GCAATG	2 cut(s)	424, 879
BseAI	TCCGGA	1 cut(s)	2881
BseBI	CCWGG	7 cut(s)	158, 326, 1066, 1739, 1830, 2339, 2363
BseCI	ATCGAT	2 cut(s)	920, 2757
BseDI	CCNNGG	6 cut(s)	204, 267, 324, 1064, 1373, 2862
BseGI	GGATG	8 cut(s)	72, 517, 823, 1230, 1327, 1546, 2442, 2470
BseLI	CCNNNNNNNGG	2 cut(s)	1783, 1965
BseMI	GCAATG	2 cut(s)	424, 879
BseMII	CTCAG	4 cut(s)	351, 486, 1771, 2985
BseNI	ACTGG	4 cut(s)	15, 546, 2281, 2476
BseRI	GAGGAG	1 cut(s)	1028
BseSI	GKGCMC	1 cut(s)	473
BseXI	GCAGC	7 cut(s)	527, 1603, 1663, 1991, 2022, 2042, 2423
BseYI	CCCAGC	1 cut(s)	1619
BsgI	GTGCAG	2 cut(s)	163, 1778
Bsh1236I	CGCG	1 cut(s)	306
Bsh1285I	CGRYCG	1 cut(s)	1825
BshFI	GGCC	8 cut(s)	161, 601, 1496, 1737, 1754, 1828, 1958, 1969
BshVI	ATCGAT	2 cut(s)	920, 2757
BsiEI	CGRYCG	1 cut(s)	1825
BsiHKAI	GWGCWC	2 cut(s)	679, 2796
BsiHKCI	CYCGRG	3 cut(s)	1373, 1974, 2351
BslFI	GGGAC	1 cut(s)	1636
BslI	CCNNNNNNNGG	2 cut(s)	1783, 1965
BsmAI	GTCTC	4 cut(s)	347, 983, 2524, 2921
BsmBI	CGTCTC	1 cut(s)	2921
BsmFI	GGGAC	1 cut(s)	1636
BsmI	GAATGC	1 cut(s)	453
BsnI	GGCC	8 cut(s)	161, 601, 1496, 1737, 1754, 1828, 1958, 1969
Bso31I	GGTCTC	3 cut(s)	347, 983, 2524
BsoBI	CYCGRG	3 cut(s)	1373, 1974, 2351
Bsp119I	TTCGAA	1 cut(s)	2127
Bsp1286I	GDGCHC	4 cut(s)	473, 679, 1605, 2796
Bsp13I	TCCGGA	1 cut(s)	2881
Bsp1407I	TGTACA	2 cut(s)	489, 2920
Bsp19I	CCATGG	2 cut(s)	204, 267
BspACI	CCGC	6 cut(s)	501, 1228, 2008, 2053, 2311, 2593
BspANI	GGCC	8 cut(s)	161, 601, 1496, 1737, 1754, 1828, 1958, 1969
BspCNI	CTCAG	4 cut(s)	350, 487, 1770, 2986
BspDI	ATCGAT	2 cut(s)	920, 2757
BspEI	TCCGGA	1 cut(s)	2881
BspFNI	CGCG	1 cut(s)	306
BspHI	TCATGA	2 cut(s)	727, 2788
BspLI	GGNNCC	3 cut(s)	546, 809, 1743
BspMI	ACCTGC	2 cut(s)	1800, 1910
BspPI	GGATC	5 cut(s)	1736, 1749, 1859, 2783, 2853
BspQI	GCTCTTC	1 cut(s)	378
BspT104I	TTCGAA	1 cut(s)	2127
BspTI	CTTAAG	1 cut(s)	647
BspTNI	GGTCTC	3 cut(s)	347, 983, 2524
BsrDI	GCAATG	2 cut(s)	424, 879
BsrFI	RCCGGY	1 cut(s)	389
BsrGI	TGTACA	2 cut(s)	489, 2920
BsrI	ACTGG	4 cut(s)	15, 546, 2281, 2476
BssAI	RCCGGY	1 cut(s)	389
BssECI	CCNNGG	6 cut(s)	204, 267, 324, 1064, 1373, 2862
BssSI	CACGAG	1 cut(s)	841
BssT1I	CCWWGG	2 cut(s)	204, 267
Bst2BI	CACGAG	1 cut(s)	841
Bst2UI	CCWGG	7 cut(s)	158, 326, 1066, 1739, 1830, 2339, 2363
Bst4CI	ACNGT	7 cut(s)	596, 1750, 2018, 2031, 2049, 2063, 2377
Bst6I	CTCTTC	3 cut(s)	350, 378, 924
BstAFI	CTTAAG	1 cut(s)	647
BstAUI	TGTACA	2 cut(s)	489, 2920
BstBAI	YACGTR	1 cut(s)	275
BstBI	TTCGAA	1 cut(s)	2127
BstDSI	CCRYGG	3 cut(s)	204, 267, 2862
BstF5I	GGATG	8 cut(s)	72, 517, 823, 1230, 1327, 1546, 2442, 2470
BstFNI	CGCG	1 cut(s)	306
BstH2I	RGCGCY	1 cut(s)	1386
BstHHI	GCGC	4 cut(s)	308, 389, 692, 1385
BstMAI	GTCTC	4 cut(s)	347, 983, 2524, 2921
BstMCI	CGRYCG	1 cut(s)	1825
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 869, 1979, 2193, 2399, 2408, 2420, 2429
BstNI	CCWGG	7 cut(s)	158, 326, 1066, 1739, 1830, 2339, 2363
BstSFI	CTRYAG	6 cut(s)	1033, 1781, 2014, 2027, 2045, 2059
BstSLI	GKGCMC	1 cut(s)	473
BstUI	CGCG	1 cut(s)	306
BstV1I	GCAGC	7 cut(s)	527, 1603, 1663, 1991, 2022, 2042, 2423
BstV2I	GAAGAC	4 cut(s)	250, 2057, 2505, 2708
BstX2I	RGATCY	2 cut(s)	1741, 2858
BstYI	RGATCY	2 cut(s)	1741, 2858
Bsu15I	ATCGAT	2 cut(s)	920, 2757
Bsu36I	CCTNAGG	2 cut(s)	337, 1649
BsuRI	GGCC	8 cut(s)	161, 601, 1496, 1737, 1754, 1828, 1958, 1969
BsuTUI	ATCGAT	2 cut(s)	920, 2757
BtgI	CCRYGG	3 cut(s)	204, 267, 2862
BtgZI	GCGATG	1 cut(s)	2702
BtrI	CACGTC	2 cut(s)	2368, 2931
BtsCI	GGATG	8 cut(s)	72, 517, 823, 1230, 1327, 1546, 2442, 2470
BtsI	GCAGTG	2 cut(s)	774, 828
BtsIMutI	CAGTG	4 cut(s)	8, 492, 774, 828
BveI	ACCTGC	2 cut(s)	1800, 1910
CaiI	CAGNNNCTG	2 cut(s)	827, 1619
CciI	TCATGA	2 cut(s)	727, 2788
CfoI	GCGC	4 cut(s)	308, 389, 692, 1385
Cfr10I	RCCGGY	1 cut(s)	389
Cfr13I	GGNCC	3 cut(s)	544, 600, 1753
Cfr9I	CCCGGG	1 cut(s)	1373
ClaI	ATCGAT	2 cut(s)	920, 2757
CseI	GACGC	1 cut(s)	1445
Csp6I	GTAC	6 cut(s)	490, 1451, 2032, 2050, 2479, 2921
CspCI	CAANNNNNGTGG	2 cut(s)	861, 896
CviQI	GTAC	6 cut(s)	490, 1451, 2032, 2050, 2479, 2921
DraIII	CACNNNGTG	1 cut(s)	498
DrdI	GACNNNNNNGTC	2 cut(s)	152, 254
DseDI	GACNNNNNNGTC	2 cut(s)	152, 254
EaeI	YGGCCR	5 cut(s)	159, 1494, 1735, 1826, 1956
Eam1104I	CTCTTC	3 cut(s)	350, 378, 924
EarI	CTCTTC	3 cut(s)	350, 378, 924
EciI	GGCGGA	1 cut(s)	2300
Ecl136II	GAGCTC	1 cut(s)	2794
Eco130I	CCWWGG	2 cut(s)	204, 267
Eco24I	GRGCYC	2 cut(s)	1605, 2796
Eco31I	GGTCTC	3 cut(s)	347, 983, 2524
Eco32I	GATATC	4 cut(s)	1571, 2288, 2308, 3007
Eco47I	GGWCC	1 cut(s)	544
Eco53kI	GAGCTC	1 cut(s)	2794
Eco57I	CTGAAG	1 cut(s)	833
Eco72I	CACGTG	1 cut(s)	275
Eco81I	CCTNAGG	2 cut(s)	337, 1649
Eco88I	CYCGRG	3 cut(s)	1373, 1974, 2351
EcoICRI	GAGCTC	1 cut(s)	2794
EcoRI	GAATTC	3 cut(s)	948, 1412, 2660
EcoRII	CCWGG	7 cut(s)	156, 324, 1064, 1737, 1828, 2337, 2361
EcoRV	GATATC	4 cut(s)	1571, 2288, 2308, 3007
EcoT14I	CCWWGG	2 cut(s)	204, 267
EcoT38I	GRGCYC	2 cut(s)	1605, 2796
ErhI	CCWWGG	2 cut(s)	204, 267
Esp3I	CGTCTC	1 cut(s)	2921
FaqI	GGGAC	1 cut(s)	1636
FauI	CCCGC	1 cut(s)	1221
FauNDI	CATATG	2 cut(s)	2171, 2460
FbaI	TGATCA	2 cut(s)	573, 1281
FblI	GTMKAC	1 cut(s)	1215
Fnu4HI	GCNGC	7 cut(s)	516, 1617, 1677, 1980, 2011, 2056, 2412
FokI	GGATG	8 cut(s)	59, 524, 830, 1237, 1334, 1553, 2429, 2477
FriOI	GRGCYC	2 cut(s)	1605, 2796
Fsp4HI	GCNGC	7 cut(s)	516, 1617, 1677, 1980, 2011, 2056, 2412
FspBI	CTAG	6 cut(s)	195, 588, 1100, 2358, 2570, 2916
GlaI	GCGC	4 cut(s)	307, 388, 691, 1384
GluI	GCNGC	7 cut(s)	516, 1617, 1677, 1980, 2011, 2056, 2412
GsaI	CCCAGC	1 cut(s)	1623
GsuI	CTGGAG	3 cut(s)	86, 1443, 2459
HaeII	RGCGCY	1 cut(s)	1386
HaeIII	GGCC	8 cut(s)	161, 601, 1496, 1737, 1754, 1828, 1958, 1969
HgaI	GACGC	1 cut(s)	1445
HhaI	GCGC	4 cut(s)	308, 389, 692, 1385
Hin6I	GCGC	4 cut(s)	306, 387, 690, 1383
HinP1I	GCGC	4 cut(s)	306, 387, 690, 1383
HindIII	AAGCTT	1 cut(s)	2391
HphI	GGTGA	3 cut(s)	29, 515, 1220
Hpy166II	GTNNAC	4 cut(s)	492, 772, 1216, 2921
Hpy188I	TCNGA	7 cut(s)	292, 1534, 2039, 2082, 2200, 2632, 3001
Hpy8I	GTNNAC	4 cut(s)	492, 772, 1216, 2921
Hpy99I	CGWCG	3 cut(s)	688, 1461, 1941
HpyAV	CCTTC	7 cut(s)	404, 808, 934, 1888, 1998, 2502, 2725
HpyCH4III	ACNGT	7 cut(s)	596, 1750, 2018, 2031, 2049, 2063, 2377
HpyCH4IV	ACGT	7 cut(s)	274, 1114, 1732, 2022, 2367, 2544, 2930
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 869, 1979, 2193, 2399, 2408, 2420, 2429
HpySE526I	ACGT	7 cut(s)	274, 1114, 1732, 2022, 2367, 2544, 2930
HspAI	GCGC	4 cut(s)	306, 387, 690, 1383
Kpn2I	TCCGGA	1 cut(s)	2881
KroI	GCCGGC	1 cut(s)	389
KroNI	GCCGGC	1 cut(s)	391
Ksp22I	TGATCA	2 cut(s)	573, 1281
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	8 cut(s)	293, 807, 1144, 2201, 2266, 2478, 2801, 3023
Lsp1109I	GCAGC	7 cut(s)	527, 1603, 1663, 1991, 2022, 2042, 2423
LweI	GCATC	6 cut(s)	14, 502, 808, 1215, 2326, 2674
MaeI	CTAG	6 cut(s)	195, 588, 1100, 2358, 2570, 2916
MaeII	ACGT	7 cut(s)	274, 1114, 1732, 2022, 2367, 2544, 2930
MaeIII	GTNAC	6 cut(s)	278, 661, 2018, 2237, 2549, 2965
MflI	RGATCY	2 cut(s)	1741, 2858
MhlI	GDGCHC	4 cut(s)	473, 679, 1605, 2796
MlsI	TGGCCA	3 cut(s)	161, 1737, 1958
MluNI	TGGCCA	3 cut(s)	161, 1737, 1958
MlyI	GAGTC	4 cut(s)	1253, 2446, 2546, 3005
MmeI	TCCRAC	3 cut(s)	1801, 2062, 2105
Mox20I	TGGCCA	3 cut(s)	161, 1737, 1958
MroI	TCCGGA	1 cut(s)	2881
MroNI	GCCGGC	1 cut(s)	389
MroXI	GAANNNNTTC	2 cut(s)	2637, 2877
MscI	TGGCCA	3 cut(s)	161, 1737, 1958
Msp20I	TGGCCA	3 cut(s)	161, 1737, 1958
MspA1I	CMGCKG	2 cut(s)	1616, 2055
MspCI	CTTAAG	1 cut(s)	647
Mva1269I	GAATGC	1 cut(s)	453
MvaI	CCWGG	7 cut(s)	158, 326, 1066, 1739, 1830, 2339, 2363
MvnI	CGCG	1 cut(s)	306
MwoI	GCNNNNNNNGC	8 cut(s)	11, 869, 1979, 2193, 2399, 2408, 2420, 2429
NaeI	GCCGGC	1 cut(s)	391
NciI	CCSGG	5 cut(s)	245, 368, 524, 1374, 1375
NcoI	CCATGG	2 cut(s)	204, 267
NdeI	CATATG	2 cut(s)	2171, 2460
NgoMIV	GCCGGC	1 cut(s)	389
NlaIV	GGNNCC	3 cut(s)	546, 809, 1743
NmuCI	GTSAC	1 cut(s)	2549
NspV	TTCGAA	1 cut(s)	2127
OliI	CACNNNNGTG	1 cut(s)	845
PaeR7I	CTCGAG	1 cut(s)	2351
PagI	TCATGA	2 cut(s)	727, 2788
PaqCI	CACCTGC	1 cut(s)	1910
PciSI	GCTCTTC	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	453
PdiI	GCCGGC	1 cut(s)	391
PdmI	GAANNNNTTC	2 cut(s)	2637, 2877
PfeI	GAWTC	6 cut(s)	724, 2334, 2347, 2468, 2754, 2885
PflFI	GACNNNGTC	1 cut(s)	251
PflMI	CCANNNNNTGG	1 cut(s)	1965
PfoI	TCCNGGA	1 cut(s)	2337
PkrI	GCNGC	7 cut(s)	517, 1618, 1678, 1981, 2012, 2057, 2413
Ple19I	CGATCG	1 cut(s)	1825
PleI	GAGTC	4 cut(s)	1253, 2446, 2546, 3004
PmaCI	CACGTG	1 cut(s)	275
PmlI	CACGTG	1 cut(s)	275
PpsI	GAGTC	4 cut(s)	1253, 2446, 2546, 3004
Ppu21I	YACGTR	1 cut(s)	275
PshBI	ATTAAT	1 cut(s)	782
PsiI	TTATAA	2 cut(s)	482, 2895
Psp124BI	GAGCTC	1 cut(s)	2796
Psp6I	CCWGG	7 cut(s)	156, 324, 1064, 1737, 1828, 2337, 2361
PspCI	CACGTG	1 cut(s)	275
PspFI	CCCAGC	1 cut(s)	1619
PspGI	CCWGG	7 cut(s)	156, 324, 1064, 1737, 1828, 2337, 2361
PspN4I	GGNNCC	3 cut(s)	546, 809, 1743
PspPI	GGNCC	3 cut(s)	544, 600, 1753
PstNI	CAGNNNCTG	2 cut(s)	827, 1619
PsuI	RGATCY	2 cut(s)	1741, 2858
PsyI	GACNNNGTC	1 cut(s)	251
PvuI	CGATCG	1 cut(s)	1825
PvuII	CAGCTG	1 cut(s)	1616
RsaI	GTAC	6 cut(s)	491, 1452, 2033, 2051, 2480, 2922
RsaNI	GTAC	6 cut(s)	490, 1451, 2032, 2050, 2479, 2921
SacI	GAGCTC	1 cut(s)	2796
SapI	GCTCTTC	1 cut(s)	378
SatI	GCNGC	7 cut(s)	516, 1617, 1677, 1980, 2011, 2056, 2412
Sau96I	GGNCC	3 cut(s)	544, 600, 1753
ScaI	AGTACT	2 cut(s)	1452, 2033
SchI	GAGTC	4 cut(s)	1253, 2446, 2546, 3005
SduI	GDGCHC	4 cut(s)	473, 679, 1605, 2796
SfaNI	GCATC	6 cut(s)	14, 502, 808, 1215, 2326, 2674
SfcI	CTRYAG	6 cut(s)	1033, 1781, 2014, 2027, 2045, 2059
Sfr274I	CTCGAG	1 cut(s)	2351
SfuI	TTCGAA	1 cut(s)	2127
SinI	GGWCC	1 cut(s)	544
SlaI	CTCGAG	1 cut(s)	2351
SmaI	CCCGGG	1 cut(s)	1375
SmlI	CTYRAG	7 cut(s)	377, 647, 1235, 1333, 2321, 2351, 2388
SmoI	CTYRAG	7 cut(s)	377, 647, 1235, 1333, 2321, 2351, 2388
SpeI	ACTAGT	1 cut(s)	2915
SsiI	CCGC	6 cut(s)	501, 1228, 2008, 2053, 2311, 2593
SspI	AATATT	2 cut(s)	1767, 1953
SspMI	CTAG	6 cut(s)	195, 588, 1100, 2358, 2570, 2916
SstI	GAGCTC	1 cut(s)	2796
StyI	CCWWGG	2 cut(s)	204, 267
TaaI	ACNGT	7 cut(s)	596, 1750, 2018, 2031, 2049, 2063, 2377
TaiI	ACGT	7 cut(s)	277, 1117, 1735, 2025, 2370, 2547, 2933
TatI	WGTACW	4 cut(s)	489, 1450, 2031, 2920
TfiI	GAWTC	6 cut(s)	724, 2334, 2347, 2468, 2754, 2885
TscAI	CASTG	4 cut(s)	15, 499, 781, 828
TseFI	GTSAC	1 cut(s)	2549
TseI	GCWGC	7 cut(s)	515, 1616, 1676, 1979, 2010, 2055, 2411
Tsp45I	GTSAC	1 cut(s)	2549
TspGWI	ACGGA	4 cut(s)	2537, 2788, 2851, 3010
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	4 cut(s)	15, 499, 781, 828
Tth111I	GACNNNGTC	1 cut(s)	251
Van91I	CCANNNNNTGG	1 cut(s)	1965
Vha464I	CTTAAG	1 cut(s)	647
VpaK11BI	GGWCC	1 cut(s)	544
VspI	ATTAAT	1 cut(s)	782
XapI	RAATTY	8 cut(s)	234, 948, 1242, 1368, 1412, 2130, 2164, 2660
XcmI	CCANNNNNNNNNTGG	1 cut(s)	610
XhoI	CTCGAG	1 cut(s)	2351
XmaI	CCCGGG	1 cut(s)	1373
XmiI	GTMKAC	1 cut(s)	1215
XmnI	GAANNNNTTC	2 cut(s)	2637, 2877
XspI	CTAG	6 cut(s)	195, 588, 1100, 2358, 2570, 2916
ZrmI	AGTACT	2 cut(s)	1452, 2033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.