Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009449

Physical Location & Seq

Genomic Coordinates Forward (+)

8166713 .. 8168481

Gene Structure 1769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g11810.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGCGCGCGTGAGTTCATGGATCTTAGTGCTGATGGTGGTGGCGATGGCCGTGAGGGCGGAGCAAAATATTAACAATACGGGAAAGGTATATTGGTCCAGCGCAGAAGACGAGGCGCAGGCTCAGACTCGGACTCAGCCTCGGGACGAAGATACCGCCGTCGCTGACCTTGACGCCGACGGCGGCTTCTCTTCTCTGGAGGGAATGTTACAGTGGGCTATAGGCCACTCCGATCCCGTCCAATTGAAAGAAAAGGCGCGAGATGTCGAGCGATTGTCTCCCGCAGACCTAAACGACCGCCGGCTAGAGATAAAGCAGCTCATGGACGAGCTGAAGACGCCGTCGGACGCGCAGCTGATGCAGATTGCGATTGACGACTTGAGTAACTCGTCGCTGTCGTTGGAAGATCGGCACCGTGCTCTGGAGGAACTGCTGGTGCTGGTGGAGCCGATTGATAACGCAAATGATTTGAACAAGCTTGGGGGGATTGCTGCGGTTATACGAGAGCTTAATCATGGTGATGCAGATACAAGAAAATTGGCTGCTTGGGTGCTTGGGACGGCCAGTCAGAACAACCCAGTTGTTCAGAAGCAGGTTCTGGAACATGGGGCATTGCCCAAGCTAGTAAAGATGGTGAAATCTAGCTTTGTAGAAGAAGCTACTAAGGCATTGTTTGCCGTTTCGGCGTTGATCCGAAATAATGTAGCTGGGCAAGAGTTGTTCTATGTGGAAGATGGGCATTTAGTCCTTCAGGACATTATGAGTGATGCAAGCATTGATATCAGACTGCGAAGGAAAGCGGTGTTTCTTCTTGGTGATCTTGCTGAGTGTCAATTGGAAAACATGGATAAGGATGAGCTGCCCTTTTTCAGTAATCGGGTTTTCTTGAAGTCTGTGGTTGATCTAACATCATCTGCTGACCTTGATTTGCAGGAGAAGGCCCTTATCGCGCTTAAGAATCTTCTGCAACTGAGGACAACCGAAGCTCTGGTTTTTAAGAACTTTTGTGGGTTGGATGGTGCCTTGGAGAGATTGAGGCAGCGACTGCAGGGTTTATTGGTAGACGAAGACCACAGAGATTATGCGGTGGAAGTGGAAAGCATCCGCAGTGAAGTGCAGCAGATTTTTGATAGAAAGTTGGAAAAGGTAACGCGAGTTCCTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Fes1

Protein Analysis

389

Amino Acids

43.35

Weight (kDa)

4.84

Isoelectric Point (pI)

37.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51980
fragaria_vesca	FvH4_4g21990 FvH4_4g21990
malus_domestica	MD13G1135300.v1.1
prunus_persica	Prupe.1G210000_v2.0.a1 Prupe.1G210000_v2.0.a1 Prupe.1G210000_v2.0.a1 Prupe.1G210000_v2.0.a1 Prupe.1G210000_v2.0.a1 Prupe.1G210000_v2.0.a1
pyrus_communis	pycom13g11810
rosa_chinensis	RchiOBHm_Chr4g0428181
rosa_laevigata	RLG00000007172
rosa_multiflora	Rmu_sc0004940.1_g000006 Rmu_sc0009599.1_g000006
rosa_roxburghii	Rroxscaffold_5G00369910
rosa_rugosa	Rorug04G0223300
rosa_samantha	Rh4AG280600 Rh4BG286100 Rh4CG301400 Rh4DG283100
rosa_wichuraiana	Rw4G024370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	583
AccB1I	GGYRCC	2 cut(s)	411, 1019
AccI	GTMKAC	1 cut(s)	1062
AccII	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
AciI	CCGC	9 cut(s)	59, 156, 183, 282, 298, 494, 800, 1085, 1105
AclWI	GGATC	3 cut(s)	29, 227, 685
AcoI	YGGCCR	2 cut(s)	48, 561
AcuI	CTGAAG	2 cut(s)	353, 734
AcyI	GRCGYC	2 cut(s)	174, 338
AfiI	CCNNNNNNNGG	1 cut(s)	421
AflII	CTTAAG	1 cut(s)	953
AgsI	TTSAA	3 cut(s)	247, 472, 889
AhdI	GACNNNNNGTC	1 cut(s)	564
AjuI	GAANNNNNNNTTGG	2 cut(s)	76, 108
Alw21I	GWGCWC	1 cut(s)	421
Alw26I	GTCTC	1 cut(s)	282
AlwI	GGATC	3 cut(s)	29, 227, 685
AlwNI	CAGNNNCTG	2 cut(s)	598, 1045
Ama87I	CYCGRG	1 cut(s)	141
AoxI	GGCC	4 cut(s)	48, 223, 561, 939
ApeKI	GCWGC	7 cut(s)	316, 352, 491, 542, 859, 1039, 1117
AspLEI	GCGC	7 cut(s)	7, 9, 104, 118, 259, 352, 952
AspS9I	GGNCC	2 cut(s)	96, 940
AsuHPI	GGTGA	3 cut(s)	530, 646, 827
AvaI	CYCGRG	1 cut(s)	141
AvaII	GGWCC	1 cut(s)	96
BaeI	ACNNNNGTAYC	2 cut(s)	144, 177
BanI	GGYRCC	2 cut(s)	411, 1019
BbsI	GAAGAC	3 cut(s)	114, 341, 1074
Bbv12I	GWGCWC	1 cut(s)	421
BbvI	GCAGC	7 cut(s)	328, 364, 478, 529, 846, 1051, 1129
BccI	CCATC	5 cut(s)	28, 40, 625, 728, 1010
BceAI	ACGGC	6 cut(s)	35, 143, 196, 325, 576, 662
BcoDI	GTCTC	1 cut(s)	282
BfaI	CTAG	3 cut(s)	305, 623, 642
BfmI	CTRYAG	2 cut(s)	219, 1046
BfrI	CTTAAG	1 cut(s)	953
BfuAI	ACCTGC	1 cut(s)	583
BglI	GCCNNNNNGGC	2 cut(s)	56, 683
BisI	GCNGC	8 cut(s)	184, 317, 353, 492, 543, 860, 1040, 1118
BlsI	GCNGC	8 cut(s)	185, 318, 354, 493, 544, 861, 1041, 1119
Bme18I	GGWCC	1 cut(s)	96
BmeRI	GACNNNNNGTC	1 cut(s)	564
BmeT110I	CYCGRG	1 cut(s)	141
BmgT120I	GGNCC	2 cut(s)	96, 940
BmiI	GGNNCC	3 cut(s)	413, 447, 1021
BmrI	ACTGGG	1 cut(s)	572
BmsI	GCATC	4 cut(s)	348, 511, 757, 1110
BmuI	ACTGGG	1 cut(s)	572
BpiI	GAAGAC	3 cut(s)	114, 341, 1074
BpmI	CTGGAG	2 cut(s)	218, 443
BpuEI	CTTGAG	1 cut(s)	400
BsaHI	GRCGYC	2 cut(s)	174, 338
BsaJI	CCNNGG	2 cut(s)	140, 1023
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	1 cut(s)	421
Bse118I	RCCGGY	1 cut(s)	300
Bse1I	ACTGG	2 cut(s)	564, 578
Bse3DI	GCAATG	1 cut(s)	611
BseDI	CCNNGG	2 cut(s)	140, 1023
BseGI	GGATG	3 cut(s)	859, 1021, 1101
BseLI	CCNNNNNNNGG	1 cut(s)	421
BseMI	GCAATG	1 cut(s)	611
BseMII	CTCAG	4 cut(s)	137, 149, 816, 962
BseNI	ACTGG	2 cut(s)	564, 578
BsePI	GCGCGC	1 cut(s)	5
BseXI	GCAGC	7 cut(s)	328, 364, 478, 529, 846, 1051, 1129
BseYI	CCCAGC	1 cut(s)	707
BsgI	GTGCAG	1 cut(s)	1136
Bsh1236I	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	4 cut(s)	50, 225, 563, 941
BshNI	GGYRCC	2 cut(s)	411, 1019
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	1 cut(s)	421
BsiHKCI	CYCGRG	1 cut(s)	141
BsiSI	CCGG	1 cut(s)	301
BslFI	GGGAC	2 cut(s)	158, 571
BslI	CCNNNNNNNGG	1 cut(s)	421
BsmAI	GTCTC	1 cut(s)	282
BsmFI	GGGAC	2 cut(s)	158, 571
BsnI	GGCC	4 cut(s)	50, 225, 563, 941
BsoBI	CYCGRG	1 cut(s)	141
Bsp1286I	GDGCHC	1 cut(s)	421
Bsp143I	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
BspACI	CCGC	9 cut(s)	59, 156, 183, 282, 298, 494, 800, 1085, 1105
BspANI	GGCC	4 cut(s)	50, 225, 563, 941
BspCNI	CTCAG	4 cut(s)	136, 148, 817, 963
BspFNI	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
BspLI	GGNNCC	3 cut(s)	413, 447, 1021
BspMAI	CTGCAG	1 cut(s)	1050
BspMI	ACCTGC	1 cut(s)	583
BspPI	GGATC	3 cut(s)	29, 227, 685
BspT107I	GGYRCC	2 cut(s)	411, 1019
BspTI	CTTAAG	1 cut(s)	953
BsrDI	GCAATG	1 cut(s)	611
BsrFI	RCCGGY	1 cut(s)	300
BsrI	ACTGG	2 cut(s)	564, 578
BssAI	RCCGGY	1 cut(s)	300
BssECI	CCNNGG	2 cut(s)	140, 1023
BssHII	GCGCGC	1 cut(s)	5
BssMI	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
BssNI	GRCGYC	2 cut(s)	174, 338
BssT1I	CCWWGG	1 cut(s)	1023
Bst4CI	ACNGT	2 cut(s)	213, 416
Bst6I	CTCTTC	1 cut(s)	196
BstACI	GRCGYC	2 cut(s)	174, 338
BstAFI	CTTAAG	1 cut(s)	953
BstAPI	GCANNNNNTGC	3 cut(s)	358, 674, 1045
BstC8I	GCNNGC	4 cut(s)	7, 120, 302, 772
BstDEI	CTNAG	6 cut(s)	25, 123, 135, 663, 825, 971
BstF5I	GGATG	3 cut(s)	859, 1021, 1101
BstFNI	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
BstHHI	GCGC	7 cut(s)	7, 9, 104, 118, 259, 352, 952
BstKTI	GATC	6 cut(s)	24, 235, 409, 693, 820, 904
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	9 cut(s)	56, 337, 358, 445, 665, 674, 683, 947, 1045
BstSFI	CTRYAG	2 cut(s)	219, 1046
BstUI	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
BstV1I	GCAGC	7 cut(s)	328, 364, 478, 529, 846, 1051, 1129
BstV2I	GAAGAC	3 cut(s)	114, 341, 1074
BstX2I	RGATCY	1 cut(s)	21
BstYI	RGATCY	1 cut(s)	21
BsuRI	GGCC	4 cut(s)	50, 225, 563, 941
BtgZI	GCGATG	1 cut(s)	59
BtsCI	GGATG	3 cut(s)	859, 1021, 1101
BtsI	GCAGTG	1 cut(s)	1114
BtsIMutI	CAGTG	2 cut(s)	218, 1114
BveI	ACCTGC	1 cut(s)	583
Cac8I	GCNNGC	4 cut(s)	7, 120, 302, 772
CaiI	CAGNNNCTG	2 cut(s)	598, 1045
CfoI	GCGC	7 cut(s)	7, 9, 104, 118, 259, 352, 952
Cfr10I	RCCGGY	1 cut(s)	300
Cfr13I	GGNCC	2 cut(s)	96, 940
CseI	GACGC	3 cut(s)	182, 346, 356
CviAII	CATG	6 cut(s)	18, 322, 515, 605, 844, 1164
DdeI	CTNAG	6 cut(s)	25, 123, 135, 663, 825, 971
DpnI	GATC	6 cut(s)	23, 234, 408, 692, 819, 903
DpnII	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
DriI	GACNNNNNGTC	1 cut(s)	564
EaeI	YGGCCR	2 cut(s)	48, 561
Eam1104I	CTCTTC	1 cut(s)	196
Eam1105I	GACNNNNNGTC	1 cut(s)	564
EarI	CTCTTC	1 cut(s)	196
EciI	GGCGGA	1 cut(s)	74
Eco130I	CCWWGG	1 cut(s)	1023
Eco32I	GATATC	1 cut(s)	781
Eco47I	GGWCC	1 cut(s)	96
Eco57I	CTGAAG	2 cut(s)	353, 734
Eco88I	CYCGRG	1 cut(s)	141
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRV	GATATC	1 cut(s)	781
EcoT14I	CCWWGG	1 cut(s)	1023
ErhI	CCWWGG	1 cut(s)	1023
FaeI	CATG	6 cut(s)	21, 325, 518, 608, 847, 1167
FaqI	GGGAC	2 cut(s)	158, 571
FatI	CATG	6 cut(s)	17, 321, 514, 604, 843, 1163
FauI	CCCGC	1 cut(s)	289
FblI	GTMKAC	1 cut(s)	1062
Fnu4HI	GCNGC	8 cut(s)	184, 317, 353, 492, 543, 860, 1040, 1118
FokI	GGATG	3 cut(s)	866, 1028, 1088
Fsp4HI	GCNGC	8 cut(s)	184, 317, 353, 492, 543, 860, 1040, 1118
FspBI	CTAG	3 cut(s)	305, 623, 642
GlaI	GCGC	7 cut(s)	6, 8, 103, 117, 258, 351, 951
GluI	GCNGC	8 cut(s)	184, 317, 353, 492, 543, 860, 1040, 1118
GsaI	CCCAGC	1 cut(s)	711
GsuI	CTGGAG	2 cut(s)	218, 443
HaeIII	GGCC	4 cut(s)	50, 225, 563, 941
HapII	CCGG	1 cut(s)	301
HgaI	GACGC	3 cut(s)	182, 346, 356
HhaI	GCGC	7 cut(s)	7, 9, 104, 118, 259, 352, 952
Hin1I	GRCGYC	2 cut(s)	174, 338
Hin1II	CATG	6 cut(s)	21, 325, 518, 608, 847, 1167
Hin6I	GCGC	7 cut(s)	5, 7, 102, 116, 257, 350, 950
HinP1I	GCGC	7 cut(s)	5, 7, 102, 116, 257, 350, 950
HindIII	AAGCTT	1 cut(s)	476
HinfI	GANTC	3 cut(s)	127, 133, 958
HpaII	CCGG	1 cut(s)	301
HphI	GGTGA	3 cut(s)	530, 646, 827
Hpy166II	GTNNAC	1 cut(s)	1063
Hpy188I	TCNGA	8 cut(s)	126, 132, 232, 346, 570, 588, 695, 785
Hpy188III	TCNNGA	6 cut(s)	143, 197, 422, 599, 752, 886
Hpy8I	GTNNAC	1 cut(s)	1063
Hpy99I	CGWCG	4 cut(s)	164, 182, 346, 394
HpyAV	CCTTC	3 cut(s)	758, 786, 931
HpyCH4III	ACNGT	2 cut(s)	213, 416
HpyCH4V	TGCA	7 cut(s)	361, 524, 770, 931, 967, 1048, 1117
HpyF10VI	GCNNNNNNNGC	9 cut(s)	56, 337, 358, 445, 665, 674, 683, 947, 1045
HpyF3I	CTNAG	6 cut(s)	25, 123, 135, 663, 825, 971
Hsp92I	GRCGYC	2 cut(s)	174, 338
Hsp92II	CATG	6 cut(s)	21, 325, 518, 608, 847, 1167
HspAI	GCGC	7 cut(s)	5, 7, 102, 116, 257, 350, 950
KroI	GCCGGC	1 cut(s)	300
KroNI	GCCGGC	1 cut(s)	302
Kzo9I	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
LmnI	GCTCC	2 cut(s)	61, 445
Lsp1109I	GCAGC	7 cut(s)	328, 364, 478, 529, 846, 1051, 1129
LweI	GCATC	4 cut(s)	348, 511, 757, 1110
MaeI	CTAG	3 cut(s)	305, 623, 642
MaeIII	GTNAC	3 cut(s)	207, 383, 1147
MalI	GATC	6 cut(s)	23, 234, 408, 692, 819, 903
MboI	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
MfeI	CAATTG	2 cut(s)	242, 833
MflI	RGATCY	1 cut(s)	21
MhlI	GDGCHC	1 cut(s)	421
MluCI	AATT	3 cut(s)	242, 536, 833
MlyI	GAGTC	2 cut(s)	121, 127
MmeI	TCCRAC	4 cut(s)	324, 381, 993, 1119
MnlI	CCTC	7 cut(s)	48, 106, 150, 193, 418, 966, 1029
MroNI	GCCGGC	1 cut(s)	300
MseI	TTAA	4 cut(s)	72, 510, 954, 996
MslI	CAYNNNNRTG	1 cut(s)	519
MspA1I	CMGCKG	1 cut(s)	355
MspCI	CTTAAG	1 cut(s)	953
MspI	CCGG	1 cut(s)	301
MunI	CAATTG	2 cut(s)	242, 833
MvnI	CGCG	6 cut(s)	7, 9, 259, 350, 950, 1153
MwoI	GCNNNNNNNGC	9 cut(s)	56, 337, 358, 445, 665, 674, 683, 947, 1045
NaeI	GCCGGC	1 cut(s)	302
NdeII	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
NgoMIV	GCCGGC	1 cut(s)	300
NlaIII	CATG	6 cut(s)	21, 325, 518, 608, 847, 1167
NlaIV	GGNNCC	3 cut(s)	413, 447, 1021
PauI	GCGCGC	1 cut(s)	5
PcsI	WCGNNNNNNNCGW	1 cut(s)	395
PdiI	GCCGGC	1 cut(s)	302
PfeI	GAWTC	1 cut(s)	958
PflFI	GACNNNGTC	1 cut(s)	340
PkrI	GCNGC	8 cut(s)	185, 318, 354, 493, 544, 861, 1041, 1119
PleI	GAGTC	2 cut(s)	121, 127
PpsI	GAGTC	2 cut(s)	121, 127
PspFI	CCCAGC	1 cut(s)	707
PspN4I	GGNNCC	3 cut(s)	413, 447, 1021
PspPI	GGNCC	2 cut(s)	96, 940
PsrI	GAACNNNNNNTAC	1 cut(s)	1140
PstI	CTGCAG	1 cut(s)	1050
PstNI	CAGNNNCTG	2 cut(s)	598, 1045
PsuI	RGATCY	1 cut(s)	21
PsyI	GACNNNGTC	1 cut(s)	340
PteI	GCGCGC	1 cut(s)	5
PvuII	CAGCTG	1 cut(s)	355
RseI	CAYNNNNRTG	1 cut(s)	519
SaqAI	TTAA	4 cut(s)	72, 510, 954, 996
SatI	GCNGC	8 cut(s)	184, 317, 353, 492, 543, 860, 1040, 1118
Sau3AI	GATC	6 cut(s)	21, 232, 406, 690, 817, 901
Sau96I	GGNCC	2 cut(s)	96, 940
SchI	GAGTC	2 cut(s)	121, 127
SduI	GDGCHC	1 cut(s)	421
SfaNI	GCATC	4 cut(s)	348, 511, 757, 1110
SfcI	CTRYAG	2 cut(s)	219, 1046
SinI	GGWCC	1 cut(s)	96
SmiMI	CAYNNNNRTG	1 cut(s)	519
SmlI	CTYRAG	2 cut(s)	379, 953
SmoI	CTYRAG	2 cut(s)	379, 953
Sse9I	AATT	3 cut(s)	242, 536, 833
SsiI	CCGC	9 cut(s)	59, 156, 183, 282, 298, 494, 800, 1085, 1105
SspI	AATATT	1 cut(s)	70
SspMI	CTAG	3 cut(s)	305, 623, 642
StyI	CCWWGG	1 cut(s)	1023
TaaI	ACNGT	2 cut(s)	213, 416
TaqI	TCGA	1 cut(s)	267
TasI	AATT	3 cut(s)	242, 536, 833
TauI	GCSGC	1 cut(s)	186
TfiI	GAWTC	1 cut(s)	958
Tru1I	TTAA	4 cut(s)	72, 510, 954, 996
Tru9I	TTAA	4 cut(s)	72, 510, 954, 996
TscAI	CASTG	2 cut(s)	218, 1114
TseI	GCWGC	7 cut(s)	316, 352, 491, 542, 859, 1039, 1117
TspDTI	ATGAA	1 cut(s)	6
TspRI	CASTG	2 cut(s)	218, 1114
Tth111I	GACNNNGTC	1 cut(s)	340
Vha464I	CTTAAG	1 cut(s)	953
VpaK11BI	GGWCC	1 cut(s)	96
XmiI	GTMKAC	1 cut(s)	1062
XspI	CTAG	3 cut(s)	305, 623, 642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.