CW-type Zinc Finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g08084 FvH4_4g17693 |
| malus_domestica | MD13G1170600.v1.1 MD16G1172200.v1.1 |
| prunus_persica | Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 |
| pyrus_communis | pycom13g14620 pycom16g14450 |
| rosa_chinensis | RchiOBHm_Chr4g0421671 |
| rosa_laevigata | RLG00000007660 |
| rosa_multiflora | Rmu_sc0004533.1_g000012 |
| rosa_roxburghii | Rroxscaffold_5G00363910 |
| rosa_rugosa | Rorug04G0174300 Rorug04G0174400 Rorug04G0174400 Rorug04G0174500 Rorug04G0174500 |
| rosa_samantha | Rh4AG233800 Rh4BG236900 Rh4CG248700 Rh4DG232600 |
| rosa_wichuraiana | Rw0G007710 Rw4G020020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2196 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1042 |
| AbsI | CCTCGAGG | 1 cut(s) | 4858 |
| Acc16I | TGCGCA | 1 cut(s) | 4894 |
| Acc36I | ACCTGC | 4 cut(s) | 1302, 1639, 2138, 2196 |
| AccB1I | GGYRCC | 3 cut(s) | 2921, 3950, 5033 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4543, 4723 |
| AccBSI | CCGCTC | 1 cut(s) | 4800 |
| AccI | GTMKAC | 1 cut(s) | 1269 |
| AclWI | GGATC | 5 cut(s) | 1623, 1981, 3051, 3064, 3671 |
| AcuI | CTGAAG | 8 cut(s) | 158, 539, 950, 1116, 1980, 2580, 3192, 4421 |
| AcvI | CACGTG | 1 cut(s) | 1331 |
| AcyI | GRCGYC | 2 cut(s) | 2532, 3951 |
| AdeI | CACNNNGTG | 1 cut(s) | 3795 |
| AfeI | AGCGCT | 1 cut(s) | 927 |
| AflII | CTTAAG | 1 cut(s) | 4346 |
| AjiI | CACGTC | 2 cut(s) | 2665, 4013 |
| AjnI | CCWGG | 6 cut(s) | 715, 902, 1103, 1921, 2514, 2825 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3401, 3433 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2071, 2103 |
| Alw21I | GWGCWC | 2 cut(s) | 307, 1779 |
| Alw26I | GTCTC | 8 cut(s) | 161, 243, 1579, 2168, 2644, 2735, 4323, 4680 |
| AlwI | GGATC | 5 cut(s) | 1623, 1981, 3051, 3064, 3671 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 316, 989, 1799, 2042, 3967, 4097 |
| Ama87I | CYCGRG | 1 cut(s) | 4858 |
| Aor51HI | AGCGCT | 1 cut(s) | 927 |
| AoxI | GGCC | 5 cut(s) | 127, 1110, 4285, 4545, 5007 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4122 |
| AspLEI | GCGC | 4 cut(s) | 928, 3953, 4261, 4895 |
| AspS9I | GGNCC | 5 cut(s) | 127, 394, 1322, 3183, 3895 |
| AsuC2I | CCSGG | 2 cut(s) | 80, 3061 |
| AsuII | TTCGAA | 1 cut(s) | 526 |
| AvaI | CYCGRG | 1 cut(s) | 4858 |
| AvaII | GGWCC | 4 cut(s) | 394, 1322, 3183, 3895 |
| AxyI | CCTNAGG | 2 cut(s) | 624, 4282 |
| BaeGI | GKGCMC | 2 cut(s) | 1020, 4519 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4125, 4158 |
| BamHI | GGATCC | 1 cut(s) | 3056 |
| BanI | GGYRCC | 3 cut(s) | 2921, 3950, 5033 |
| BanII | GRGCYC | 2 cut(s) | 1779, 3938 |
| BbrPI | CACGTG | 1 cut(s) | 1331 |
| BbsI | GAAGAC | 6 cut(s) | 66, 216, 254, 1008, 2568, 4677 |
| Bbv12I | GWGCWC | 2 cut(s) | 307, 1779 |
| BceAI | ACGGC | 2 cut(s) | 567, 4403 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4496, 4530 |
| BciT130I | CCWGG | 6 cut(s) | 717, 904, 1105, 1923, 2516, 2827 |
| BciVI | GTATCC | 1 cut(s) | 910 |
| BclI | TGATCA | 2 cut(s) | 2389, 4231 |
| BcnI | CCSGG | 2 cut(s) | 80, 3061 |
| BcoDI | GTCTC | 8 cut(s) | 161, 243, 1579, 2168, 2644, 2735, 4323, 4680 |
| BfaI | CTAG | 9 cut(s) | 1619, 2265, 2679, 2856, 3120, 4080, 4127, 4614, 4667 |
| BfmI | CTRYAG | 5 cut(s) | 837, 1791, 2015, 2043, 4491 |
| BfoI | RGCGCY | 2 cut(s) | 929, 3954 |
| BfrI | CTTAAG | 1 cut(s) | 4346 |
| BfuAI | ACCTGC | 4 cut(s) | 1302, 1639, 2138, 2196 |
| BfuI | GTATCC | 1 cut(s) | 910 |
| BglII | AGATCT | 1 cut(s) | 278 |
| BlpI | GCTNAGC | 1 cut(s) | 760 |
| BmcAI | AGTACT | 3 cut(s) | 2049, 2860, 4489 |
| Bme1390I | CCNGG | 8 cut(s) | 80, 717, 904, 1105, 1923, 2516, 2827, 3061 |
| Bme18I | GGWCC | 4 cut(s) | 394, 1322, 3183, 3895 |
| BmeT110I | CYCGRG | 1 cut(s) | 4858 |
| BmgBI | CACGTC | 2 cut(s) | 2665, 4013 |
| BmgT120I | GGNCC | 5 cut(s) | 127, 394, 1322, 3183, 3895 |
| BmrFI | CCNGG | 8 cut(s) | 80, 717, 904, 1105, 1923, 2516, 2827, 3061 |
| BmrI | ACTGGG | 1 cut(s) | 4910 |
| BmuI | ACTGGG | 1 cut(s) | 4910 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2550, 3853 |
| BpiI | GAAGAC | 6 cut(s) | 66, 216, 254, 1008, 2568, 4677 |
| BpmI | CTGGAG | 2 cut(s) | 738, 3588 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2319 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 760 |
| Bpu14I | TTCGAA | 1 cut(s) | 526 |
| BpuEI | CTTGAG | 3 cut(s) | 429, 639, 956 |
| BpuMI | CCSGG | 2 cut(s) | 80, 3061 |
| Bsa29I | ATCGAT | 2 cut(s) | 1933, 3341 |
| BsaAI | YACGTR | 1 cut(s) | 1331 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2079 |
| BsaHI | GRCGYC | 2 cut(s) | 2532, 3951 |
| BsaI | GGTCTC | 2 cut(s) | 2168, 2644 |
| BsaWI | WCCGGW | 1 cut(s) | 919 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1648, 1678, 2807, 2837, 3561, 3591 |
| Bse1I | ACTGG | 6 cut(s) | 794, 1199, 1770, 2866, 3680, 4905 |
| Bse21I | CCTNAGG | 2 cut(s) | 624, 4282 |
| Bse3DI | GCAATG | 6 cut(s) | 1420, 2642, 2872, 4036, 4854, 5007 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2079 |
| BseBI | CCWGG | 6 cut(s) | 717, 904, 1105, 1923, 2516, 2827 |
| BseCI | ATCGAT | 2 cut(s) | 1933, 3341 |
| BseJI | GATNNNNATC | 1 cut(s) | 2079 |
| BseMI | GCAATG | 6 cut(s) | 1420, 2642, 2872, 4036, 4854, 5007 |
| BseNI | ACTGG | 6 cut(s) | 794, 1199, 1770, 2866, 3680, 4905 |
| BseRI | GAGGAG | 6 cut(s) | 30, 297, 2442, 4270, 4653, 4988 |
| BseSI | GKGCMC | 2 cut(s) | 1020, 4519 |
| BseYI | CCCAGC | 3 cut(s) | 989, 3285, 4175 |
| BshFI | GGCC | 5 cut(s) | 129, 1112, 4287, 4547, 5009 |
| BshNI | GGYRCC | 3 cut(s) | 2921, 3950, 5033 |
| BshVI | ATCGAT | 2 cut(s) | 1933, 3341 |
| BsiHKAI | GWGCWC | 2 cut(s) | 307, 1779 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4858 |
| BsiSI | CCGG | 4 cut(s) | 80, 920, 1874, 3060 |
| BslFI | GGGAC | 2 cut(s) | 3337, 4192 |
| BsmAI | GTCTC | 8 cut(s) | 161, 243, 1579, 2168, 2644, 2735, 4323, 4680 |
| BsmFI | GGGAC | 2 cut(s) | 3337, 4192 |
| BsmI | GAATGC | 3 cut(s) | 124, 3010, 4879 |
| BsnI | GGCC | 5 cut(s) | 129, 1112, 4287, 4547, 5009 |
| Bso31I | GGTCTC | 2 cut(s) | 2168, 2644 |
| BsoBI | CYCGRG | 1 cut(s) | 4858 |
| Bsp119I | TTCGAA | 1 cut(s) | 526 |
| Bsp1286I | GDGCHC | 5 cut(s) | 307, 1020, 1779, 3938, 4519 |
| Bsp1407I | TGTACA | 1 cut(s) | 4482 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 760 |
| BspANI | GGCC | 5 cut(s) | 129, 1112, 4287, 4547, 5009 |
| BspDI | ATCGAT | 2 cut(s) | 1933, 3341 |
| BspHI | TCATGA | 3 cut(s) | 969, 3742, 3979 |
| BspMAI | CTGCAG | 3 cut(s) | 1795, 2019, 2047 |
| BspMI | ACCTGC | 4 cut(s) | 1302, 1639, 2138, 2196 |
| BspPI | GGATC | 5 cut(s) | 1623, 1981, 3051, 3064, 3671 |
| BspQI | GCTCTTC | 2 cut(s) | 1278, 3097 |
| BspT104I | TTCGAA | 1 cut(s) | 526 |
| BspT107I | GGYRCC | 3 cut(s) | 2921, 3950, 5033 |
| BspTI | CTTAAG | 1 cut(s) | 4346 |
| BspTNI | GGTCTC | 2 cut(s) | 2168, 2644 |
| BsrBI | CCGCTC | 1 cut(s) | 4800 |
| BsrDI | GCAATG | 6 cut(s) | 1420, 2642, 2872, 4036, 4854, 5007 |
| BsrGI | TGTACA | 1 cut(s) | 4482 |
| BsrI | ACTGG | 6 cut(s) | 794, 1199, 1770, 2866, 3680, 4905 |
| BssNAI | GTATAC | 1 cut(s) | 1270 |
| BssNI | GRCGYC | 2 cut(s) | 2532, 3951 |
| BssT1I | CCWWGG | 7 cut(s) | 1744, 2355, 2589, 2781, 4042, 4411, 4557 |
| Bst1107I | GTATAC | 1 cut(s) | 1270 |
| Bst2UI | CCWGG | 6 cut(s) | 717, 904, 1105, 1923, 2516, 2827 |
| Bst4CI | ACNGT | 9 cut(s) | 188, 749, 850, 1719, 1865, 3304, 3866, 4487, 4604 |
| Bst6I | CTCTTC | 6 cut(s) | 1158, 1278, 1944, 2417, 3097, 3695 |
| BstACI | GRCGYC | 2 cut(s) | 2532, 3951 |
| BstAFI | CTTAAG | 1 cut(s) | 4346 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1294, 1973, 2051, 2060, 4639 |
| BstAUI | TGTACA | 1 cut(s) | 4482 |
| BstBAI | YACGTR | 1 cut(s) | 1331 |
| BstBI | TTCGAA | 1 cut(s) | 526 |
| BstC8I | GCNNGC | 9 cut(s) | 1907, 2285, 2442, 2586, 3388, 4173, 4644, 4891, 4998 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| BstH2I | RGCGCY | 2 cut(s) | 929, 3954 |
| BstHHI | GCGC | 4 cut(s) | 928, 3953, 4261, 4895 |
| BstMAI | GTCTC | 8 cut(s) | 161, 243, 1579, 2168, 2644, 2735, 4323, 4680 |
| BstNI | CCWGG | 6 cut(s) | 717, 904, 1105, 1923, 2516, 2827 |
| BstNSI | RCATGY | 4 cut(s) | 1665, 1909, 2444, 3068 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2550, 3853 |
| BstSCI | CCNGG | 8 cut(s) | 78, 715, 902, 1103, 1921, 2514, 2825, 3059 |
| BstSFI | CTRYAG | 5 cut(s) | 837, 1791, 2015, 2043, 4491 |
| BstSLI | GKGCMC | 2 cut(s) | 1020, 4519 |
| BstV2I | GAAGAC | 6 cut(s) | 66, 216, 254, 1008, 2568, 4677 |
| BstX2I | RGATCY | 4 cut(s) | 278, 1615, 1986, 3056 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2522 |
| BstYI | RGATCY | 4 cut(s) | 278, 1615, 1986, 3056 |
| BstZ17I | GTATAC | 1 cut(s) | 1270 |
| Bsu15I | ATCGAT | 2 cut(s) | 1933, 3341 |
| Bsu36I | CCTNAGG | 2 cut(s) | 624, 4282 |
| BsuI | GTATCC | 1 cut(s) | 910 |
| BsuRI | GGCC | 5 cut(s) | 129, 1112, 4287, 4547, 5009 |
| BsuTUI | ATCGAT | 2 cut(s) | 1933, 3341 |
| BtrI | CACGTC | 2 cut(s) | 2665, 4013 |
| BtsI | GCAGTG | 1 cut(s) | 672 |
| BveI | ACCTGC | 4 cut(s) | 1302, 1639, 2138, 2196 |
| Cac8I | GCNNGC | 9 cut(s) | 1907, 2285, 2442, 2586, 3388, 4173, 4644, 4891, 4998 |
| CaiI | CAGNNNCTG | 6 cut(s) | 316, 989, 1799, 2042, 3967, 4097 |
| CciI | TCATGA | 3 cut(s) | 969, 3742, 3979 |
| CfoI | GCGC | 4 cut(s) | 928, 3953, 4261, 4895 |
| Cfr13I | GGNCC | 5 cut(s) | 127, 394, 1322, 3183, 3895 |
| ClaI | ATCGAT | 2 cut(s) | 1933, 3341 |
| CseI | GACGC | 2 cut(s) | 2540, 3894 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 5011, 5046 |
| DinI | GGCGCC | 1 cut(s) | 3952 |
| DraIII | CACNNNGTG | 1 cut(s) | 3795 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1042 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1042 |
| Eam1104I | CTCTTC | 6 cut(s) | 1158, 1278, 1944, 2417, 3097, 3695 |
| EarI | CTCTTC | 6 cut(s) | 1158, 1278, 1944, 2417, 3097, 3695 |
| Ecl136II | GAGCTC | 1 cut(s) | 1777 |
| Eco130I | CCWWGG | 7 cut(s) | 1744, 2355, 2589, 2781, 4042, 4411, 4557 |
| Eco24I | GRGCYC | 2 cut(s) | 1779, 3938 |
| Eco31I | GGTCTC | 2 cut(s) | 2168, 2644 |
| Eco32I | GATATC | 3 cut(s) | 732, 1182, 2807 |
| Eco47I | GGWCC | 4 cut(s) | 394, 1322, 3183, 3895 |
| Eco47III | AGCGCT | 1 cut(s) | 927 |
| Eco53kI | GAGCTC | 1 cut(s) | 1777 |
| Eco57I | CTGAAG | 8 cut(s) | 158, 539, 950, 1116, 1980, 2580, 3192, 4421 |
| Eco72I | CACGTG | 1 cut(s) | 1331 |
| Eco81I | CCTNAGG | 2 cut(s) | 624, 4282 |
| Eco88I | CYCGRG | 1 cut(s) | 4858 |
| EcoICRI | GAGCTC | 1 cut(s) | 1777 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| EcoO109I | RGGNCCY | 2 cut(s) | 394, 3183 |
| EcoRI | GAATTC | 5 cut(s) | 111, 157, 424, 2458, 3416 |
| EcoRII | CCWGG | 6 cut(s) | 715, 902, 1103, 1921, 2514, 2825 |
| EcoRV | GATATC | 3 cut(s) | 732, 1182, 2807 |
| EcoT14I | CCWWGG | 7 cut(s) | 1744, 2355, 2589, 2781, 4042, 4411, 4557 |
| EcoT22I | ATGCAT | 4 cut(s) | 727, 1978, 3010, 4574 |
| EcoT38I | GRGCYC | 2 cut(s) | 1779, 3938 |
| EgeI | GGCGCC | 1 cut(s) | 3952 |
| EheI | GGCGCC | 1 cut(s) | 3952 |
| ErhI | CCWWGG | 7 cut(s) | 1744, 2355, 2589, 2781, 4042, 4411, 4557 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3625, 3657, 3938, 3970 |
| FaqI | GGGAC | 2 cut(s) | 3337, 4192 |
| FauI | CCCGC | 2 cut(s) | 146, 261 |
| FauNDI | CATATG | 1 cut(s) | 2277 |
| FbaI | TGATCA | 2 cut(s) | 2389, 4231 |
| FblI | GTMKAC | 1 cut(s) | 1269 |
| FriOI | GRGCYC | 2 cut(s) | 1779, 3938 |
| FspBI | CTAG | 9 cut(s) | 1619, 2265, 2679, 2856, 3120, 4080, 4127, 4614, 4667 |
| FspI | TGCGCA | 1 cut(s) | 4894 |
| GlaI | GCGC | 4 cut(s) | 927, 3952, 4260, 4894 |
| GsaI | CCCAGC | 3 cut(s) | 993, 3289, 4179 |
| GsuI | CTGGAG | 2 cut(s) | 738, 3588 |
| HaeII | RGCGCY | 2 cut(s) | 929, 3954 |
| HaeIII | GGCC | 5 cut(s) | 129, 1112, 4287, 4547, 5009 |
| HapII | CCGG | 4 cut(s) | 80, 920, 1874, 3060 |
| HgaI | GACGC | 2 cut(s) | 2540, 3894 |
| HhaI | GCGC | 4 cut(s) | 928, 3953, 4261, 4895 |
| Hin1I | GRCGYC | 2 cut(s) | 2532, 3951 |
| Hin6I | GCGC | 4 cut(s) | 926, 3951, 4259, 4893 |
| HinP1I | GCGC | 4 cut(s) | 926, 3951, 4259, 4893 |
| HincII | GTYRAC | 2 cut(s) | 2470, 3127 |
| HindII | GTYRAC | 2 cut(s) | 2470, 3127 |
| HindIII | AAGCTT | 5 cut(s) | 321, 776, 932, 1098, 4994 |
| HpaI | GTTAAC | 1 cut(s) | 3127 |
| HpaII | CCGG | 4 cut(s) | 80, 920, 1874, 3060 |
| Hpy166II | GTNNAC | 7 cut(s) | 1270, 1334, 2470, 3127, 4483, 4600, 4607 |
| Hpy8I | GTNNAC | 7 cut(s) | 1270, 1334, 2470, 3127, 4483, 4600, 4607 |
| HpyCH4III | ACNGT | 9 cut(s) | 188, 749, 850, 1719, 1865, 3304, 3866, 4487, 4604 |
| HpyCH4IV | ACGT | 4 cut(s) | 1330, 2664, 4012, 4472 |
| HpySE526I | ACGT | 4 cut(s) | 1330, 2664, 4012, 4472 |
| Hsp92I | GRCGYC | 2 cut(s) | 2532, 3951 |
| HspAI | GCGC | 4 cut(s) | 926, 3951, 4259, 4893 |
| KasI | GGCGCC | 1 cut(s) | 3950 |
| Ksp22I | TGATCA | 2 cut(s) | 2389, 4231 |
| KspAI | GTTAAC | 1 cut(s) | 3127 |
| LguI | GCTCTTC | 2 cut(s) | 1278, 3097 |
| MaeI | CTAG | 9 cut(s) | 1619, 2265, 2679, 2856, 3120, 4080, 4127, 4614, 4667 |
| MaeII | ACGT | 4 cut(s) | 1330, 2664, 4012, 4472 |
| MaeIII | GTNAC | 7 cut(s) | 378, 1232, 1539, 1713, 3424, 3860, 4161 |
| MbiI | CCGCTC | 1 cut(s) | 4800 |
| MfeI | CAATTG | 1 cut(s) | 4025 |
| MflI | RGATCY | 4 cut(s) | 278, 1615, 1986, 3056 |
| MhlI | GDGCHC | 5 cut(s) | 307, 1020, 1779, 3938, 4519 |
| Mly113I | GGCGCC | 1 cut(s) | 3951 |
| MlyI | GAGTC | 8 cut(s) | 1003, 1175, 1581, 2014, 2861, 3712, 4013, 4682 |
| MmeI | TCCRAC | 2 cut(s) | 524, 4770 |
| Mph1103I | ATGCAT | 4 cut(s) | 727, 1978, 3010, 4574 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4122 |
| MslI | CAYNNNNRTG | 7 cut(s) | 2028, 3534, 3540, 4524, 4577, 4592, 4917 |
| MspA1I | CMGCKG | 2 cut(s) | 1637, 1790 |
| MspCI | CTTAAG | 1 cut(s) | 4346 |
| MspI | CCGG | 4 cut(s) | 80, 920, 1874, 3060 |
| MspR9I | CCNGG | 8 cut(s) | 80, 717, 904, 1105, 1923, 2516, 2827, 3061 |
| MunI | CAATTG | 1 cut(s) | 4025 |
| Mva1269I | GAATGC | 3 cut(s) | 124, 3010, 4879 |
| MvaI | CCWGG | 6 cut(s) | 717, 904, 1105, 1923, 2516, 2827 |
| NarI | GGCGCC | 1 cut(s) | 3951 |
| NciI | CCSGG | 2 cut(s) | 80, 3061 |
| NdeI | CATATG | 1 cut(s) | 2277 |
| NmuCI | GTSAC | 5 cut(s) | 378, 1539, 3424, 3860, 4161 |
| NsbI | TGCGCA | 1 cut(s) | 4894 |
| NsiI | ATGCAT | 4 cut(s) | 727, 1978, 3010, 4574 |
| NspI | RCATGY | 4 cut(s) | 1665, 1909, 2444, 3068 |
| NspV | TTCGAA | 1 cut(s) | 526 |
| PaeI | GCATGC | 2 cut(s) | 1909, 2444 |
| PaeR7I | CTCGAG | 1 cut(s) | 4858 |
| PagI | TCATGA | 3 cut(s) | 969, 3742, 3979 |
| PaqCI | CACCTGC | 1 cut(s) | 2196 |
| PciSI | GCTCTTC | 2 cut(s) | 1278, 3097 |
| PctI | GAATGC | 3 cut(s) | 124, 3010, 4879 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4122 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4543, 4723 |
| PfoI | TCCNGGA | 3 cut(s) | 715, 902, 2825 |
| PleI | GAGTC | 8 cut(s) | 1002, 1174, 1580, 2014, 2860, 3711, 4012, 4681 |
| PluTI | GGCGCC | 1 cut(s) | 3954 |
| PmaCI | CACGTG | 1 cut(s) | 1331 |
| PmlI | CACGTG | 1 cut(s) | 1331 |
| PpsI | GAGTC | 8 cut(s) | 1002, 1174, 1580, 2014, 2860, 3711, 4012, 4681 |
| Ppu21I | YACGTR | 1 cut(s) | 1331 |
| PpuMI | RGGWCCY | 2 cut(s) | 394, 3183 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2550, 3853 |
| Psp124BI | GAGCTC | 1 cut(s) | 1779 |
| Psp5II | RGGWCCY | 2 cut(s) | 394, 3183 |
| Psp6I | CCWGG | 6 cut(s) | 715, 902, 1103, 1921, 2514, 2825 |
| PspCI | CACGTG | 1 cut(s) | 1331 |
| PspFI | CCCAGC | 3 cut(s) | 989, 3285, 4175 |
| PspGI | CCWGG | 6 cut(s) | 715, 902, 1103, 1921, 2514, 2825 |
| PspPI | GGNCC | 5 cut(s) | 127, 394, 1322, 3183, 3895 |
| PspPPI | RGGWCCY | 2 cut(s) | 394, 3183 |
| PspXI | VCTCGAGB | 1 cut(s) | 4858 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3545, 3577 |
| PstI | CTGCAG | 3 cut(s) | 1795, 2019, 2047 |
| PstNI | CAGNNNCTG | 6 cut(s) | 316, 989, 1799, 2042, 3967, 4097 |
| PsuI | RGATCY | 4 cut(s) | 278, 1615, 1986, 3056 |
| PvuII | CAGCTG | 1 cut(s) | 1790 |
| RseI | CAYNNNNRTG | 7 cut(s) | 2028, 3534, 3540, 4524, 4577, 4592, 4917 |
| SacI | GAGCTC | 1 cut(s) | 1779 |
| SapI | GCTCTTC | 2 cut(s) | 1278, 3097 |
| Sau96I | GGNCC | 5 cut(s) | 127, 394, 1322, 3183, 3895 |
| ScaI | AGTACT | 3 cut(s) | 2049, 2860, 4489 |
| SchI | GAGTC | 8 cut(s) | 1003, 1175, 1581, 2014, 2861, 3712, 4013, 4682 |
| ScrFI | CCNGG | 8 cut(s) | 80, 717, 904, 1105, 1923, 2516, 2827, 3061 |
| SduI | GDGCHC | 5 cut(s) | 307, 1020, 1779, 3938, 4519 |
| SfcI | CTRYAG | 5 cut(s) | 837, 1791, 2015, 2043, 4491 |
| SfoI | GGCGCC | 1 cut(s) | 3952 |
| Sfr274I | CTCGAG | 1 cut(s) | 4858 |
| SfuI | TTCGAA | 1 cut(s) | 526 |
| SinI | GGWCC | 4 cut(s) | 394, 1322, 3183, 3895 |
| SlaI | CTCGAG | 1 cut(s) | 4858 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 2028, 3534, 3540, 4524, 4577, 4592, 4917 |
| SmlI | CTYRAG | 5 cut(s) | 444, 654, 935, 4346, 4858 |
| SmoI | CTYRAG | 5 cut(s) | 444, 654, 935, 4346, 4858 |
| SphI | GCATGC | 2 cut(s) | 1909, 2444 |
| SspDI | GGCGCC | 1 cut(s) | 3950 |
| SspI | AATATT | 3 cut(s) | 1056, 1432, 3310 |
| SspMI | CTAG | 9 cut(s) | 1619, 2265, 2679, 2856, 3120, 4080, 4127, 4614, 4667 |
| SstI | GAGCTC | 1 cut(s) | 1779 |
| StyD4I | CCNGG | 8 cut(s) | 78, 715, 902, 1103, 1921, 2514, 2825, 3059 |
| StyI | CCWWGG | 7 cut(s) | 1744, 2355, 2589, 2781, 4042, 4411, 4557 |
| TaaI | ACNGT | 9 cut(s) | 188, 749, 850, 1719, 1865, 3304, 3866, 4487, 4604 |
| TaiI | ACGT | 4 cut(s) | 1333, 2667, 4015, 4475 |
| TaqI | TCGA | 9 cut(s) | 508, 526, 1933, 2272, 2304, 3179, 3341, 3695, 4859 |
| TatI | WGTACW | 5 cut(s) | 2047, 2858, 4482, 4487, 4616 |
| TauI | GCSGC | 3 cut(s) | 1637, 1852, 4536 |
| TseFI | GTSAC | 5 cut(s) | 378, 1539, 3424, 3860, 4161 |
| Tsp45I | GTSAC | 5 cut(s) | 378, 1539, 3424, 3860, 4161 |
| TspGWI | ACGGA | 2 cut(s) | 4764, 4973 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4543, 4723 |
| Vha464I | CTTAAG | 1 cut(s) | 4346 |
| VpaK11BI | GGWCC | 4 cut(s) | 394, 1322, 3183, 3895 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| XceI | RCATGY | 4 cut(s) | 1665, 1909, 2444, 3068 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3467 |
| XhoI | CTCGAG | 1 cut(s) | 4858 |
| XmiI | GTMKAC | 1 cut(s) | 1269 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4122 |
| XspI | CTAG | 9 cut(s) | 1619, 2265, 2679, 2856, 3120, 4080, 4127, 4614, 4667 |
| ZrmI | AGTACT | 3 cut(s) | 2049, 2860, 4489 |
| Zsp2I | ATGCAT | 4 cut(s) | 727, 1978, 3010, 4574 |