CW-type Zinc Finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g08084 FvH4_4g17693 |
| malus_domestica | MD13G1170600.v1.1 MD16G1172200.v1.1 |
| prunus_persica | Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 Prupe.1G139000_v2.0.a1 |
| pyrus_communis | pycom13g14620 pycom16g14450 |
| rosa_chinensis | RchiOBHm_Chr4g0421671 |
| rosa_laevigata | RLG00000007660 |
| rosa_multiflora | Rmu_sc0004533.1_g000012 |
| rosa_roxburghii | Rroxscaffold_5G00363910 |
| rosa_rugosa | Rorug04G0174300 Rorug04G0174400 Rorug04G0174400 Rorug04G0174500 Rorug04G0174500 |
| rosa_samantha | Rh4AG233800 Rh4BG236900 Rh4CG248700 Rh4DG232600 |
| rosa_wichuraiana | Rw0G007710 Rw4G020020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 7 cut(s) | 304, 1059, 1073, 1161, 1210, 1252, 2425 |
| AccB1I | GGYRCC | 2 cut(s) | 2826, 3198 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1310 |
| AccII | CGCG | 1 cut(s) | 1990 |
| AciI | CCGC | 8 cut(s) | 582, 755, 1029, 2624, 2748, 2890, 3358, 3716 |
| AclWI | GGATC | 8 cut(s) | 1096, 1509, 1808, 1932, 1978, 2015, 2447, 2479 |
| AcoI | YGGCCR | 3 cut(s) | 2390, 3206, 3925 |
| AcsI | RAATTY | 9 cut(s) | 140, 188, 1597, 2325, 3263, 3429, 3444, 3894, 3942 |
| AcuI | CTGAAG | 4 cut(s) | 994, 1594, 1858, 2674 |
| AfaI | GTAC | 9 cut(s) | 326, 793, 996, 1063, 1223, 1421, 1534, 2586, 3413 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 28, 1310, 1493, 2199, 3195, 3588, 3818, 3934 |
| AhlI | ACTAGT | 2 cut(s) | 1857, 2535 |
| AjnI | CCWGG | 8 cut(s) | 205, 425, 935, 1434, 1821, 1980, 2280, 3817 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2891, 2923, 3313, 3345 |
| Alw26I | GTCTC | 4 cut(s) | 1136, 1637, 3244, 3601 |
| AlwI | GGATC | 8 cut(s) | 1096, 1509, 1808, 1932, 1978, 2015, 2447, 2479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 801 |
| Ama87I | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| ApeKI | GCWGC | 7 cut(s) | 2028, 2745, 3315, 3339, 3474, 3734, 3804 |
| ApoI | RAATTY | 9 cut(s) | 140, 188, 1597, 2325, 3263, 3429, 3444, 3894, 3942 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 75, 107 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 166, 1741 |
| AspS9I | GGNCC | 5 cut(s) | 933, 1647, 2134, 2571, 3937 |
| AsuC2I | CCSGG | 4 cut(s) | 29, 30, 1615, 1767 |
| AsuHPI | GGTGA | 6 cut(s) | 62, 327, 1145, 1191, 1374, 3603 |
| AsuII | TTCGAA | 1 cut(s) | 3448 |
| AvaI | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| AvaII | GGWCC | 3 cut(s) | 2134, 2571, 3937 |
| BaeGI | GKGCMC | 3 cut(s) | 2831, 2987, 3440 |
| BalI | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| BanI | GGYRCC | 2 cut(s) | 2826, 3198 |
| BbsI | GAAGAC | 1 cut(s) | 1582 |
| BbvI | GCAGC | 7 cut(s) | 2015, 2757, 3302, 3351, 3461, 3721, 3791 |
| BceAI | ACGGC | 1 cut(s) | 3271 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3417, 3451 |
| BciT130I | CCWGG | 8 cut(s) | 207, 427, 937, 1436, 1823, 1982, 2282, 3819 |
| BciVI | GTATCC | 2 cut(s) | 542, 1391 |
| BclI | TGATCA | 3 cut(s) | 335, 1283, 1403 |
| BcnI | CCSGG | 4 cut(s) | 29, 30, 1615, 1767 |
| BcoDI | GTCTC | 4 cut(s) | 1136, 1637, 3244, 3601 |
| BcuI | ACTAGT | 2 cut(s) | 1857, 2535 |
| BfmI | CTRYAG | 2 cut(s) | 802, 1066 |
| BfuAI | ACCTGC | 7 cut(s) | 304, 1059, 1073, 1161, 1210, 1252, 2425 |
| BfuI | GTATCC | 2 cut(s) | 542, 1391 |
| BglII | AGATCT | 1 cut(s) | 2563 |
| BisI | GCNGC | 9 cut(s) | 583, 755, 2029, 2746, 3316, 3340, 3475, 3735, 3805 |
| BlpI | GCTNAGC | 1 cut(s) | 3418 |
| BlsI | GCNGC | 9 cut(s) | 584, 756, 2030, 2747, 3317, 3341, 3476, 3736, 3806 |
| BmcAI | AGTACT | 1 cut(s) | 2586 |
| Bme18I | GGWCC | 3 cut(s) | 2134, 2571, 3937 |
| BmeT110I | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| BmgT120I | GGNCC | 5 cut(s) | 933, 1647, 2134, 2571, 3937 |
| BmiI | GGNNCC | 5 cut(s) | 934, 2060, 2572, 2828, 3200 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2729 |
| BpiI | GAAGAC | 1 cut(s) | 1582 |
| BpmI | CTGGAG | 1 cut(s) | 1287 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3418 |
| Bpu14I | TTCGAA | 1 cut(s) | 3448 |
| BpuEI | CTTGAG | 2 cut(s) | 2103, 3571 |
| BpuMI | CCSGG | 4 cut(s) | 29, 30, 1615, 1767 |
| Bsa29I | ATCGAT | 1 cut(s) | 102 |
| BsaAI | YACGTR | 1 cut(s) | 3831 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1402, 1465, 2562, 2609 |
| BsaI | GGTCTC | 1 cut(s) | 1637 |
| BsaWI | WCCGGW | 2 cut(s) | 108, 2487 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 28, 1310, 1493, 2199, 3195, 3588, 3818, 3934 |
| Bse1I | ACTGG | 6 cut(s) | 795, 930, 2393, 2574, 2673, 3048 |
| Bse3DI | GCAATG | 3 cut(s) | 2423, 3393, 3772 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1402, 1465, 2562, 2609 |
| BseBI | CCWGG | 8 cut(s) | 207, 427, 937, 1436, 1823, 1982, 2282, 3819 |
| BseCI | ATCGAT | 1 cut(s) | 102 |
| BseJI | GATNNNNATC | 4 cut(s) | 1402, 1465, 2562, 2609 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 28, 1310, 1493, 2199, 3195, 3588, 3818, 3934 |
| BseMI | GCAATG | 3 cut(s) | 2423, 3393, 3772 |
| BseNI | ACTGG | 6 cut(s) | 795, 930, 2393, 2574, 2673, 3048 |
| BseRI | GAGGAG | 1 cut(s) | 3574 |
| BseSI | GKGCMC | 3 cut(s) | 2831, 2987, 3440 |
| BseXI | GCAGC | 7 cut(s) | 2015, 2757, 3302, 3351, 3461, 3721, 3791 |
| BseYI | CCCAGC | 2 cut(s) | 929, 2236 |
| BsgI | GTGCAG | 4 cut(s) | 282, 546, 1688, 2764 |
| Bsh1236I | CGCG | 1 cut(s) | 1990 |
| BshNI | GGYRCC | 2 cut(s) | 2826, 3198 |
| BshVI | ATCGAT | 1 cut(s) | 102 |
| BsiHKCI | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| BsiSI | CCGG | 5 cut(s) | 29, 109, 1614, 1766, 2488 |
| BslFI | GGGAC | 4 cut(s) | 2727, 2737, 3113, 3151 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 28, 1310, 1493, 2199, 3195, 3588, 3818, 3934 |
| BsmAI | GTCTC | 4 cut(s) | 1136, 1637, 3244, 3601 |
| BsmFI | GGGAC | 4 cut(s) | 2727, 2737, 3113, 3151 |
| BsmI | GAATGC | 2 cut(s) | 270, 1172 |
| Bso31I | GGTCTC | 1 cut(s) | 1637 |
| BsoBI | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| Bsp119I | TTCGAA | 1 cut(s) | 3448 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2831, 2987, 3440 |
| Bsp1407I | TGTACA | 1 cut(s) | 1221 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3418 |
| BspACI | CCGC | 8 cut(s) | 582, 755, 1029, 2624, 2748, 2890, 3358, 3716 |
| BspDI | ATCGAT | 1 cut(s) | 102 |
| BspFNI | CGCG | 1 cut(s) | 1990 |
| BspHI | TCATGA | 3 cut(s) | 2366, 2432, 2630 |
| BspLI | GGNNCC | 5 cut(s) | 934, 2060, 2572, 2828, 3200 |
| BspMAI | CTGCAG | 1 cut(s) | 1070 |
| BspMI | ACCTGC | 7 cut(s) | 304, 1059, 1073, 1161, 1210, 1252, 2425 |
| BspPI | GGATC | 8 cut(s) | 1096, 1509, 1808, 1932, 1978, 2015, 2447, 2479 |
| BspQI | GCTCTTC | 2 cut(s) | 280, 2048 |
| BspT104I | TTCGAA | 1 cut(s) | 3448 |
| BspT107I | GGYRCC | 2 cut(s) | 2826, 3198 |
| BspTNI | GGTCTC | 1 cut(s) | 1637 |
| BsrDI | GCAATG | 3 cut(s) | 2423, 3393, 3772 |
| BsrGI | TGTACA | 1 cut(s) | 1221 |
| BsrI | ACTGG | 6 cut(s) | 795, 930, 2393, 2574, 2673, 3048 |
| BssT1I | CCWWGG | 2 cut(s) | 664, 1487 |
| Bst2UI | CCWGG | 8 cut(s) | 207, 427, 937, 1436, 1823, 1982, 2282, 3819 |
| Bst4CI | ACNGT | 7 cut(s) | 178, 554, 567, 2336, 2922, 3276, 3525 |
| Bst6I | CTCTTC | 5 cut(s) | 280, 1134, 2048, 2650, 2971 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 987, 1074, 2417, 3560 |
| BstAUI | TGTACA | 1 cut(s) | 1221 |
| BstBAI | YACGTR | 1 cut(s) | 3831 |
| BstBI | TTCGAA | 1 cut(s) | 3448 |
| BstC8I | GCNNGC | 5 cut(s) | 918, 1456, 3375, 3565, 3809 |
| BstDSI | CCRYGG | 1 cut(s) | 3275 |
| BstEII | GGTNACC | 1 cut(s) | 32 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3193, 3586 |
| BstFNI | CGCG | 1 cut(s) | 1990 |
| BstMAI | GTCTC | 4 cut(s) | 1136, 1637, 3244, 3601 |
| BstNI | CCWGG | 8 cut(s) | 207, 427, 937, 1436, 1823, 1982, 2282, 3819 |
| BstNSI | RCATGY | 5 cut(s) | 920, 1124, 1458, 2019, 3918 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2729 |
| BstPI | GGTNACC | 1 cut(s) | 32 |
| BstSFI | CTRYAG | 2 cut(s) | 802, 1066 |
| BstSLI | GKGCMC | 3 cut(s) | 2831, 2987, 3440 |
| BstUI | CGCG | 1 cut(s) | 1990 |
| BstV1I | GCAGC | 7 cut(s) | 2015, 2757, 3302, 3351, 3461, 3721, 3791 |
| BstV2I | GAAGAC | 1 cut(s) | 1582 |
| BstX2I | RGATCY | 5 cut(s) | 1800, 2007, 2452, 2484, 2563 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 312, 1536 |
| BstYI | RGATCY | 5 cut(s) | 1800, 2007, 2452, 2484, 2563 |
| Bsu15I | ATCGAT | 1 cut(s) | 102 |
| BsuI | GTATCC | 2 cut(s) | 542, 1391 |
| BsuTUI | ATCGAT | 1 cut(s) | 102 |
| BtgI | CCRYGG | 1 cut(s) | 3275 |
| BtsI | GCAGTG | 2 cut(s) | 2747, 3925 |
| BtsIMutI | CAGTG | 7 cut(s) | 163, 965, 2581, 2680, 2747, 2927, 3925 |
| BveI | ACCTGC | 7 cut(s) | 304, 1059, 1073, 1161, 1210, 1252, 2425 |
| Cac8I | GCNNGC | 5 cut(s) | 918, 1456, 3375, 3565, 3809 |
| CaiI | CAGNNNCTG | 1 cut(s) | 801 |
| CciI | TCATGA | 3 cut(s) | 2366, 2432, 2630 |
| Cfr13I | GGNCC | 5 cut(s) | 933, 1647, 2134, 2571, 3937 |
| Cfr9I | CCCGGG | 1 cut(s) | 28 |
| ClaI | ATCGAT | 1 cut(s) | 102 |
| CsiI | ACCWGGT | 1 cut(s) | 425 |
| Csp6I | GTAC | 9 cut(s) | 325, 792, 995, 1062, 1222, 1420, 1533, 2585, 3412 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3929, 3964 |
| CviQI | GTAC | 9 cut(s) | 325, 792, 995, 1062, 1222, 1420, 1533, 2585, 3412 |
| DraI | TTTAAA | 1 cut(s) | 1831 |
| EaeI | YGGCCR | 3 cut(s) | 2390, 3206, 3925 |
| Eam1104I | CTCTTC | 5 cut(s) | 280, 1134, 2048, 2650, 2971 |
| EarI | CTCTTC | 5 cut(s) | 280, 1134, 2048, 2650, 2971 |
| Eco130I | CCWWGG | 2 cut(s) | 664, 1487 |
| Eco147I | AGGCCT | 1 cut(s) | 629 |
| Eco31I | GGTCTC | 1 cut(s) | 1637 |
| Eco32I | GATATC | 1 cut(s) | 106 |
| Eco47I | GGWCC | 3 cut(s) | 2134, 2571, 3937 |
| Eco57I | CTGAAG | 4 cut(s) | 994, 1594, 1858, 2674 |
| Eco88I | CYCGRG | 3 cut(s) | 28, 2567, 3001 |
| Eco91I | GGTNACC | 1 cut(s) | 32 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3193, 3586 |
| EcoO109I | RGGNCCY | 2 cut(s) | 933, 2134 |
| EcoO65I | GGTNACC | 1 cut(s) | 32 |
| EcoRI | GAATTC | 2 cut(s) | 3444, 3894 |
| EcoRII | CCWGG | 8 cut(s) | 205, 425, 935, 1434, 1821, 1980, 2280, 3817 |
| EcoRV | GATATC | 1 cut(s) | 106 |
| EcoT14I | CCWWGG | 2 cut(s) | 664, 1487 |
| EcoT22I | ATGCAT | 3 cut(s) | 992, 2612, 3495 |
| ErhI | CCWWGG | 2 cut(s) | 664, 1487 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 50, 82, 432, 464, 1787, 1819 |
| FaqI | GGGAC | 4 cut(s) | 2727, 2737, 3113, 3151 |
| FauI | CCCGC | 1 cut(s) | 1036 |
| FbaI | TGATCA | 3 cut(s) | 335, 1283, 1403 |
| Fnu4HI | GCNGC | 9 cut(s) | 583, 755, 2029, 2746, 3316, 3340, 3475, 3735, 3805 |
| Fsp4HI | GCNGC | 9 cut(s) | 583, 755, 2029, 2746, 3316, 3340, 3475, 3735, 3805 |
| GluI | GCNGC | 9 cut(s) | 583, 755, 2029, 2746, 3316, 3340, 3475, 3735, 3805 |
| GsaI | CCCAGC | 2 cut(s) | 933, 2240 |
| GsuI | CTGGAG | 1 cut(s) | 1287 |
| HapII | CCGG | 5 cut(s) | 29, 109, 1614, 1766, 2488 |
| HindIII | AAGCTT | 4 cut(s) | 446, 1226, 2079, 3420 |
| HpaII | CCGG | 5 cut(s) | 29, 109, 1614, 1766, 2488 |
| HphI | GGTGA | 6 cut(s) | 62, 327, 1145, 1191, 1374, 3603 |
| Hpy166II | GTNNAC | 5 cut(s) | 734, 1222, 3521, 3528, 3902 |
| Hpy8I | GTNNAC | 5 cut(s) | 734, 1222, 3521, 3528, 3902 |
| Hpy99I | CGWCG | 2 cut(s) | 604, 3291 |
| HpyCH4III | ACNGT | 7 cut(s) | 178, 554, 567, 2336, 2922, 3276, 3525 |
| HpyCH4IV | ACGT | 2 cut(s) | 1665, 3830 |
| HpySE526I | ACGT | 2 cut(s) | 1665, 3830 |
| Ksp22I | TGATCA | 3 cut(s) | 335, 1283, 1403 |
| LguI | GCTCTTC | 2 cut(s) | 280, 2048 |
| LmnI | GCTCC | 3 cut(s) | 812, 3162, 3336 |
| Lsp1109I | GCAGC | 7 cut(s) | 2015, 2757, 3302, 3351, 3461, 3721, 3791 |
| MabI | ACCWGGT | 1 cut(s) | 425 |
| MaeII | ACGT | 2 cut(s) | 1665, 3830 |
| MfeI | CAATTG | 1 cut(s) | 763 |
| MflI | RGATCY | 5 cut(s) | 1800, 2007, 2452, 2484, 2563 |
| MhlI | GDGCHC | 3 cut(s) | 2831, 2987, 3440 |
| MlsI | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| MluNI | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| MlyI | GAGTC | 7 cut(s) | 99, 1857, 2091, 2490, 2606, 3383, 3603 |
| Mox20I | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| Mph1103I | ATGCAT | 3 cut(s) | 992, 2612, 3495 |
| MroXI | GAANNNNTTC | 2 cut(s) | 166, 1741 |
| MscI | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| MslI | CAYNNNNRTG | 7 cut(s) | 118, 199, 275, 645, 1042, 2300, 3498 |
| Msp20I | TGGCCA | 3 cut(s) | 2392, 3208, 3927 |
| MspA1I | CMGCKG | 2 cut(s) | 2748, 3804 |
| MspI | CCGG | 5 cut(s) | 29, 109, 1614, 1766, 2488 |
| MunI | CAATTG | 1 cut(s) | 763 |
| Mva1269I | GAATGC | 2 cut(s) | 270, 1172 |
| MvaI | CCWGG | 8 cut(s) | 207, 427, 937, 1436, 1823, 1982, 2282, 3819 |
| MvnI | CGCG | 1 cut(s) | 1990 |
| NciI | CCSGG | 4 cut(s) | 29, 30, 1615, 1767 |
| NlaIV | GGNNCC | 5 cut(s) | 934, 2060, 2572, 2828, 3200 |
| NmuCI | GTSAC | 4 cut(s) | 120, 951, 2538, 3641 |
| NsiI | ATGCAT | 3 cut(s) | 992, 2612, 3495 |
| NspI | RCATGY | 5 cut(s) | 920, 1124, 1458, 2019, 3918 |
| NspV | TTCGAA | 1 cut(s) | 3448 |
| PaeI | GCATGC | 2 cut(s) | 920, 1458 |
| PaeR7I | CTCGAG | 1 cut(s) | 3001 |
| PagI | TCATGA | 3 cut(s) | 2366, 2432, 2630 |
| PceI | AGGCCT | 1 cut(s) | 629 |
| PciSI | GCTCTTC | 2 cut(s) | 280, 2048 |
| PctI | GAATGC | 2 cut(s) | 270, 1172 |
| PdmI | GAANNNNTTC | 2 cut(s) | 166, 1741 |
| PfeI | GAWTC | 8 cut(s) | 99, 573, 1985, 2109, 2206, 2316, 2846, 3725 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1310 |
| PkrI | GCNGC | 9 cut(s) | 584, 756, 2030, 2747, 3317, 3341, 3476, 3736, 3806 |
| PleI | GAGTC | 7 cut(s) | 98, 1856, 2091, 2490, 2605, 3383, 3602 |
| PpsI | GAGTC | 7 cut(s) | 98, 1856, 2091, 2490, 2605, 3383, 3602 |
| Ppu21I | YACGTR | 1 cut(s) | 3831 |
| PpuMI | RGGWCCY | 1 cut(s) | 2134 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2729 |
| Psp5II | RGGWCCY | 1 cut(s) | 2134 |
| Psp6I | CCWGG | 8 cut(s) | 205, 425, 935, 1434, 1821, 1980, 2280, 3817 |
| PspEI | GGTNACC | 1 cut(s) | 32 |
| PspFI | CCCAGC | 2 cut(s) | 929, 2236 |
| PspGI | CCWGG | 8 cut(s) | 205, 425, 935, 1434, 1821, 1980, 2280, 3817 |
| PspN4I | GGNNCC | 5 cut(s) | 934, 2060, 2572, 2828, 3200 |
| PspPI | GGNCC | 5 cut(s) | 933, 1647, 2134, 2571, 3937 |
| PspPPI | RGGWCCY | 1 cut(s) | 2134 |
| PstI | CTGCAG | 1 cut(s) | 1070 |
| PstNI | CAGNNNCTG | 1 cut(s) | 801 |
| PsuI | RGATCY | 5 cut(s) | 1800, 2007, 2452, 2484, 2563 |
| PvuII | CAGCTG | 1 cut(s) | 3804 |
| RsaI | GTAC | 9 cut(s) | 326, 793, 996, 1063, 1223, 1421, 1534, 2586, 3413 |
| RsaNI | GTAC | 9 cut(s) | 325, 792, 995, 1062, 1222, 1420, 1533, 2585, 3412 |
| RseI | CAYNNNNRTG | 7 cut(s) | 118, 199, 275, 645, 1042, 2300, 3498 |
| SapI | GCTCTTC | 2 cut(s) | 280, 2048 |
| SatI | GCNGC | 9 cut(s) | 583, 755, 2029, 2746, 3316, 3340, 3475, 3735, 3805 |
| Sau96I | GGNCC | 5 cut(s) | 933, 1647, 2134, 2571, 3937 |
| SbfI | CCTGCAGG | 1 cut(s) | 1070 |
| ScaI | AGTACT | 1 cut(s) | 2586 |
| SchI | GAGTC | 7 cut(s) | 99, 1857, 2091, 2490, 2606, 3383, 3603 |
| SdaI | CCTGCAGG | 1 cut(s) | 1070 |
| SduI | GDGCHC | 3 cut(s) | 2831, 2987, 3440 |
| SexAI | ACCWGGT | 1 cut(s) | 425 |
| SfcI | CTRYAG | 2 cut(s) | 802, 1066 |
| Sfr274I | CTCGAG | 1 cut(s) | 3001 |
| SfuI | TTCGAA | 1 cut(s) | 3448 |
| SinI | GGWCC | 3 cut(s) | 2134, 2571, 3937 |
| SlaI | CTCGAG | 1 cut(s) | 3001 |
| SmaI | CCCGGG | 1 cut(s) | 30 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 118, 199, 275, 645, 1042, 2300, 3498 |
| SmlI | CTYRAG | 3 cut(s) | 2082, 3001, 3586 |
| SmoI | CTYRAG | 3 cut(s) | 2082, 3001, 3586 |
| SpeI | ACTAGT | 2 cut(s) | 1857, 2535 |
| SphI | GCATGC | 2 cut(s) | 920, 1458 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1070 |
| SseBI | AGGCCT | 1 cut(s) | 629 |
| SsiI | CCGC | 8 cut(s) | 582, 755, 1029, 2624, 2748, 2890, 3358, 3716 |
| SspI | AATATT | 3 cut(s) | 1865, 1961, 2522 |
| StuI | AGGCCT | 1 cut(s) | 629 |
| StyI | CCWWGG | 2 cut(s) | 664, 1487 |
| TaaI | ACNGT | 7 cut(s) | 178, 554, 567, 2336, 2922, 3276, 3525 |
| TaiI | ACGT | 2 cut(s) | 1668, 3833 |
| TaqI | TCGA | 5 cut(s) | 102, 3002, 3448, 3710, 3739 |
| TaqII | GACCGA | 1 cut(s) | 3925 |
| TatI | WGTACW | 5 cut(s) | 324, 1221, 1532, 2584, 3411 |
| TauI | GCSGC | 2 cut(s) | 585, 757 |
| TfiI | GAWTC | 8 cut(s) | 99, 573, 1985, 2109, 2206, 2316, 2846, 3725 |
| TscAI | CASTG | 7 cut(s) | 163, 965, 2581, 2680, 2747, 2927, 3925 |
| TseFI | GTSAC | 4 cut(s) | 120, 951, 2538, 3641 |
| TseI | GCWGC | 7 cut(s) | 2028, 2745, 3315, 3339, 3474, 3734, 3804 |
| Tsp45I | GTSAC | 4 cut(s) | 120, 951, 2538, 3641 |
| TspGWI | ACGGA | 1 cut(s) | 1676 |
| TspMI | CCCGGG | 1 cut(s) | 28 |
| TspRI | CASTG | 7 cut(s) | 163, 965, 2581, 2680, 2747, 2927, 3925 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1310 |
| VpaK11BI | GGWCC | 3 cut(s) | 2134, 2571, 3937 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3193, 3586 |
| XapI | RAATTY | 9 cut(s) | 140, 188, 1597, 2325, 3263, 3429, 3444, 3894, 3942 |
| XceI | RCATGY | 5 cut(s) | 920, 1124, 1458, 2019, 3918 |
| XhoI | CTCGAG | 1 cut(s) | 3001 |
| XmaI | CCCGGG | 1 cut(s) | 28 |
| XmnI | GAANNNNTTC | 2 cut(s) | 166, 1741 |
| ZrmI | AGTACT | 1 cut(s) | 2586 |
| Zsp2I | ATGCAT | 3 cut(s) | 992, 2612, 3495 |