pycom13g16190
NAC Family

Transcription regulatory protein SNF2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0011969
Physical Location & Seq
Forward (+)
11919954 .. 11925442
5489 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2523 bp
ATGATCATGTCCTGTTGGCATGGAAAGCAAAGACAACGAGCCACAAGGGCTGAGAAATTGAGGTTCCAGGCCTTAAAGGCTGATGATCAGGAAGCATACATGAGAATGGTAAAGGAGAGTAAGAATGAAAGGCTAACAATACTTCTTGAAGAAACAAATAAACTCCGCGTTAATTTGGGAGCTGCTGTTCAGCGGCAGAAAGATTTTAAGCATTCAGAGGGTACTGAAGAAATGAAAGACTCTGAAGGTGATTTGACAGAGTTGGAAGAAGATGTGGACCTCATTGATTCTGATTGTAATGATGACAGTAGTGACTTGCTTAAAGGTCAGCGGCAGTATAACTCAGCCATCCATTCTATTGAGGAACAGGTGACTGAGCAACCCTCCATGCTTCAAGGTGGAGAACTAAGGTCTTACCAGGTTGAGGGCCTACAATGGATGGTTTCCTTGTTCAATAACAATCTAAATGGTATTTTGGCTGACGAGATGGGATTGGGTAAAACCATACAAACTATATCATTGATTGCATATCTCATTGAAAACAAGGGTGTCACTGGACCCCACTTGATAGTGGCTCCGAAGGCCGTATTACCAAATTGGGTTAATGAATTCGCAACATGGGCTCCTAGTATTGCTGCTATTCTTTATGATGGACGTCAAGACGAAAGAAAGGCAATGAGGGAAGAATTATCAGGGGAAGGAAAATTTAATGTGTGGATCACACATTATGACCTTATCATGAGGGATAAACAATTTTTGAAAAAAATCAACTGGTACTACTTGATTGTTGATGAAGGGCATAGGTTGAAGAATCATGAGTGTGCTCTTGCACAAACACTTGCAGGTTATGATATGCGACGAAGACTTCTGTTGACTGGTACCCCAATACAGAATAGCTTGCAGGAGTTGTGGTCCCTGCTTAATTTCCTTCTCCCACACATTTTTAATTCAGTTCAAAATTTTGAGGAATGGTTTAATGCACCTTTTGCGGATCGGGGCAGTATTACCCTTACTGATGAAGAACAGCTATTGATCATTCGCCGTCTACATCAAGTTATACGGCCCTTCATACTGAGGAGGAAAAAAGATGAGGTGGAGAAGTTCCTTCCTGGAAAATCTCAAGTCATACTGAAAAGTGACATGTCAGCATGGCAGAAAGTATATTATCAACAAGTTACAGATGTGGGCAGAGTTGGGCTCGATAATGGTTCTGGAAAATCAAAGAGCTTGCAGAACCTGACAATGCAGCTCAGGAAGTGTTGTAACCACCCATACCTTTTTGTGGGAGATTATAACATGTGGCGCAGGGAGGAGATCATCAGAGCATCAGGAAAGTTTGAACTACTTGATCGTCTACTCCCAAAACTCCACAAAGCGGGGCACAGAATCCTGCTTTTTTCACAAATGACTCGTCTCATGGACATTCTTGAAATTTATTTGCAACTTCACGACTTTAAGTATCTTCGACTGGATGGTTCAACAAAAACTGAGGAAAGGGGGACTCTGCTAAAGAAATTCAACGCTCCAGATTCTCCTTTCTTCATGTTTCTCTTGAGCACTCGTGCTGGAGGCCTTGGTTTGAACTTACAAACTGCTGATACGGTAATAATTTTCGACAGTGATTGGAATCCACAAATGGACCAACAGGCGGAGGACCGGGCCCATCGTATAGGTCAAAAGAAAGAAGTTAGGGTATTTGTGTTGGTTAGTGTTGGATCAATCGAAGAAGTAATTTTAGAGCGTGCTAAAGAGAAGATGGGCATAGATGCCAAGGTCATCCAGGCCGGACTATTTAATACAACTTCCACAGCTCAGGACAGAAGAGAGCTGTTGGAGGAAATCATGCGCAAGGGTACAAGATCACTTGGGACAGATGTACCAAGCGAGCGAGAGATCAACCGCCTTGCTGCCAGATCAGAAGAAGAGTTCTGGATGTTTGAGAAAATGGATGAGGAGAGAAGGCGAAAGGAGAACTACAGATCTCGCCTTATGGAAGACCATGAGGTTCCCGAGTGGGCATATTCAACACCTGATAAGCAAACTGCTACCAAAGGCTTTCATAGTGGCAGCATCACGGGAAAGCGCAGGAGAAAGGCAGTACAGTCTTATTCTGATGGCCTTAGTGATTTACAGTGGATGAAAGCTGTAGAAAATGGAGCAGACATATCGAAGCTTTCAGGAAGAGGAACAAAGAGAAATCATGTTCAATCAGATAGCGTTGAATTAGTTAGTGGTAATGCAGGAACAGAGGAAAAAGTTGCGAAATTGATTCACAATGTTCCGTTGGCAAAAGAGGGAGCAAGTGAAGATACCTATGAGTTGACCCCAGGCTTGAAGAGACAGAAGTCTGAAGAGCTGGAAGTAGAGAAACATGAAAGTCATGCAGCTGGAGGAAGTGGTTTGAATGGGCCTATCTTGACATTCAAGATACATCGAAAAAAGAGATCAAGCTATGTTAACCCAGGTTCCTCCTCCGATGGTAGAGGGCAAAATTCCAATGTAAGAGGTAATGGATGGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0000902 GO:0001085 GO:0001101 GO:0001102 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006996 GO:0007154 GO:0007275 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009311 GO:0009313 GO:0009408 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010015 GO:0010035 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010453 GO:0010455 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016049 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0021700 GO:0022414 GO:0022611 GO:0022622 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040007 GO:0040008 GO:0042148 GO:0042221 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0060560 GO:0061412 GO:0061458 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071695 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0097437 GO:0098727 GO:0099402 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1905392 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

841

Amino Acids

96.17

Weight (kDa)

7.09

Isoelectric Point (pI)

49.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 135 - 296 3.2e-11 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 139 - 426 2.3e-92 SNF2-related domain
HDA2-3 PF11496 407 - 583 1.2e-10 Class II histone deacetylase complex subunits 2 and 3
Helicase_C PF00271 445 - 558 6.8e-26 Helicase conserved C-terminal domain
SnAC PF14619 651 - 713 3.8e-09 Snf2-ATP coupling, chromatin remodelling complex
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011969)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06010 AT5G19310 AT5G19310
fragaria_vesca FvH4_4g14970
malus_domestica MD13G1186900.v1.1 MD16G1187800.v1.1
prunus_persica Prupe.1G154600_v2.0.a1 Prupe.1G154600_v2.0.a1
pyrus_communis pycom13g16190
rosa_chinensis RchiOBHm_Chr4g0417121
rosa_laevigata RLG00000007930
rosa_multiflora Rmu_ssc0000010.1_g000026
rosa_roxburghii Rroxscaffold_5G00360900
rosa_rugosa Rorug04G0146000
rosa_samantha Rh4AG208500 Rh4BG205700 Rh4CG219500 Rh4DG206400
rosa_wichuraiana Rw4G017670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1293
AatII GACGTC 1 cut(s) 658
Acc16I TGCGCA 1 cut(s) 1847
Acc36I ACCTGC 1 cut(s) 833
Acc65I GGTACC 1 cut(s) 878
AccB1I GGYRCC 1 cut(s) 878
AccI GTMKAC 2 cut(s) 1045, 1354
AccII CGCG 1 cut(s) 168
AciI CCGC 7 cut(s) 166, 193, 331, 989, 1376, 1649, 1900
AclWI GGATC 3 cut(s) 725, 999, 1723
AcsI RAATTY 6 cut(s) 608, 704, 958, 1431, 1514, 2491
AcuI CTGAAG 3 cut(s) 246, 264, 2370
AcyI GRCGYC 1 cut(s) 655
AfaI GTAC 6 cut(s) 223, 776, 880, 1855, 1878, 2100
AfiI CCNNNNNNNGG 4 cut(s) 424, 1282, 1375, 1648
AflIII ACRYGT 2 cut(s) 1140, 1296
AjnI CCWGG 6 cut(s) 66, 417, 1108, 1779, 2326, 2461
AloI GAACNNNNNNTCC 2 cut(s) 171, 203
Alw21I GWGCWC 2 cut(s) 826, 1559
Alw26I GTCTC 2 cut(s) 1418, 2332
AlwI GGATC 3 cut(s) 725, 999, 1723
AlwNI CAGNNNCTG 1 cut(s) 1237
Ama87I CYCGRG 1 cut(s) 2009
AoxI GGCC 9 cut(s) 69, 427, 582, 1061, 1570, 1659, 1782, 2116, 2408
ApaI GGGCCC 1 cut(s) 1663
ApeKI GCWGC 6 cut(s) 182, 635, 1246, 1907, 2067, 2384
ApoI RAATTY 6 cut(s) 608, 704, 958, 1431, 1514, 2491
ArsI GACNNNNNNTTYG 2 cut(s) 1396, 1428
Asp718I GGTACC 1 cut(s) 878
AspLEI GCGC 3 cut(s) 1305, 1848, 2085
AsuC2I CCSGG 1 cut(s) 1658
AsuHPI GGTGA 2 cut(s) 260, 382
AvaI CYCGRG 1 cut(s) 2009
AvaII GGWCC 5 cut(s) 277, 557, 912, 1639, 1654
BaeGI GKGCMC 2 cut(s) 1383, 1663
BaeI ACNNNNGTAYC 2 cut(s) 1860, 1893
BanI GGYRCC 1 cut(s) 878
BanII GRGCYC 3 cut(s) 625, 1200, 1663
BauI CACGAG 1 cut(s) 1560
BbsI GAAGAC 2 cut(s) 868, 2001
Bbv12I GWGCWC 2 cut(s) 826, 1559
BbvI GCAGC 6 cut(s) 169, 622, 1258, 1894, 2079, 2396
BceAI ACGGC 3 cut(s) 569, 1026, 1076
BcgI CGANNNNNNTGC 2 cut(s) 2148, 2182
BciT130I CCWGG 6 cut(s) 68, 419, 1110, 1781, 2328, 2463
BclI TGATCA 3 cut(s) 3, 85, 1032
BcnI CCSGG 1 cut(s) 1658
BcoDI GTCTC 2 cut(s) 1418, 2332
BfaI CTAG 1 cut(s) 627
BfmI CTRYAG 2 cut(s) 1975, 2145
BfuAI ACCTGC 1 cut(s) 833
BglI GCCNNNNNGGC 2 cut(s) 47, 77
BglII AGATCT 1 cut(s) 1979
BisI GCNGC 8 cut(s) 183, 194, 332, 636, 1247, 1908, 2068, 2385
BlsI GCNGC 8 cut(s) 184, 195, 333, 637, 1248, 1909, 2069, 2386
Bme1390I CCNGG 7 cut(s) 68, 419, 1110, 1658, 1781, 2328, 2463
Bme18I GGWCC 5 cut(s) 277, 557, 912, 1639, 1654
BmeT110I CYCGRG 1 cut(s) 2009
BmiI GGNNCC 9 cut(s) 65, 559, 576, 624, 880, 914, 1661, 2007, 2467
BmrFI CCNGG 7 cut(s) 68, 419, 1110, 1658, 1781, 2328, 2463
BmsI GCATC 3 cut(s) 1334, 1756, 2079
BoxI GACNNNNGTC 1 cut(s) 2344
BpiI GAAGAC 2 cut(s) 868, 2001
BplI GAGNNNNNCTC 4 cut(s) 368, 400, 1182, 1214
BpmI CTGGAG 3 cut(s) 1509, 1587, 2409
Bpu10I CCTNAGC 2 cut(s) 1250, 1812
BpuEI CTTGAG 2 cut(s) 1104, 1573
BpuMI CCSGG 1 cut(s) 1658
BsaBI GATNNNNATC 1 cut(s) 1626
BsaHI GRCGYC 1 cut(s) 655
BsaJI CCNNGG 4 cut(s) 1573, 1770, 2326, 2461
BsaXI ACNNNNNCTCC 6 cut(s) 171, 201, 607, 637, 896, 926
Bsc4I CCNNNNNNNGG 4 cut(s) 424, 1282, 1375, 1648
Bse1I ACTGG 4 cut(s) 559, 776, 880, 1473
Bse3DI GCAATG 1 cut(s) 681
Bse8I GATNNNNATC 1 cut(s) 1626
BseBI CCWGG 6 cut(s) 68, 419, 1110, 1781, 2328, 2463
BseDI CCNNGG 4 cut(s) 1573, 1770, 2326, 2461
BseGI GGATG 8 cut(s) 348, 444, 1477, 1776, 1938, 1954, 2142, 2519
BseJI GATNNNNATC 1 cut(s) 1626
BseLI CCNNNNNNNGG 4 cut(s) 424, 1282, 1375, 1648
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 7 cut(s) 42, 357, 366, 1064, 1264, 1479, 1826
BseNI ACTGG 4 cut(s) 559, 776, 880, 1473
BseRI GAGGAG 4 cut(s) 1090, 1325, 1967, 2461
BseSI GKGCMC 2 cut(s) 1383, 1663
BseXI GCAGC 6 cut(s) 169, 622, 1258, 1894, 2079, 2396
Bsh1236I CGCG 1 cut(s) 168
BshFI GGCC 9 cut(s) 71, 429, 584, 1063, 1572, 1661, 1784, 2118, 2410
BshNI GGYRCC 1 cut(s) 878
BsiHKAI GWGCWC 2 cut(s) 826, 1559
BsiHKCI CYCGRG 1 cut(s) 2009
BsiSI CCGG 2 cut(s) 1657, 1785
BslFI GGGAC 3 cut(s) 898, 1513, 1882
BslI CCNNNNNNNGG 4 cut(s) 424, 1282, 1375, 1648
BsmAI GTCTC 2 cut(s) 1418, 2332
BsmBI CGTCTC 1 cut(s) 1418
BsmFI GGGAC 3 cut(s) 898, 1513, 1882
BsmI GAATGC 1 cut(s) 211
BsnI GGCC 9 cut(s) 71, 429, 584, 1063, 1572, 1661, 1784, 2118, 2410
BsoBI CYCGRG 1 cut(s) 2009
Bsp120I GGGCCC 1 cut(s) 1659
Bsp1286I GDGCHC 6 cut(s) 625, 826, 1200, 1383, 1559, 1663
BspACI CCGC 7 cut(s) 166, 193, 331, 989, 1376, 1649, 1900
BspANI GGCC 9 cut(s) 71, 429, 584, 1063, 1572, 1661, 1784, 2118, 2410
BspCNI CTCAG 7 cut(s) 43, 356, 367, 1065, 1263, 1480, 1825
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 2 cut(s) 738, 814
BspLI GGNNCC 9 cut(s) 65, 559, 576, 624, 880, 914, 1661, 2007, 2467
BspMI ACCTGC 1 cut(s) 833
BspPI GGATC 3 cut(s) 725, 999, 1723
BspQI GCTCTTC 1 cut(s) 2346
BspT107I GGYRCC 1 cut(s) 878
BsrDI GCAATG 1 cut(s) 681
BsrI ACTGG 4 cut(s) 559, 776, 880, 1473
BssECI CCNNGG 4 cut(s) 1573, 1770, 2326, 2461
BssNI GRCGYC 1 cut(s) 655
BssSI CACGAG 1 cut(s) 1560
BssT1I CCWWGG 2 cut(s) 1573, 1770
Bst2BI CACGAG 1 cut(s) 1560
Bst2UI CCWGG 6 cut(s) 68, 419, 1110, 1781, 2328, 2463
Bst4CI ACNGT 5 cut(s) 308, 1603, 1619, 2103, 2133
Bst6I CTCTTC 5 cut(s) 1816, 1917, 2176, 2330, 2346
BstACI GRCGYC 1 cut(s) 655
BstAPI GCANNNNNTGC 1 cut(s) 986
BstC8I GCNNGC 4 cut(s) 899, 1229, 1743, 1886
BstDEI CTNAG 9 cut(s) 51, 343, 375, 407, 1073, 1250, 1488, 1812, 2120
BstF5I GGATG 8 cut(s) 348, 444, 1477, 1776, 1938, 1954, 2142, 2519
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 3 cut(s) 1305, 1848, 2085
BstMAI GTCTC 2 cut(s) 1418, 2332
BstMWI GCNNNNNNNGC 6 cut(s) 25, 47, 77, 581, 620, 986
BstNI CCWGG 6 cut(s) 68, 419, 1110, 1781, 2328, 2463
BstNSI RCATGY 2 cut(s) 1144, 1300
BstPAI GACNNNNGTC 1 cut(s) 2344
BstSCI CCNGG 7 cut(s) 66, 417, 1108, 1656, 1779, 2326, 2461
BstSFI CTRYAG 2 cut(s) 1975, 2145
BstSLI GKGCMC 2 cut(s) 1383, 1663
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 6 cut(s) 169, 622, 1258, 1894, 2079, 2396
BstV2I GAAGAC 2 cut(s) 868, 2001
BstX2I RGATCY 1 cut(s) 1979
BstYI RGATCY 1 cut(s) 1979
BsuRI GGCC 9 cut(s) 71, 429, 584, 1063, 1572, 1661, 1784, 2118, 2410
BtsCI GGATG 8 cut(s) 348, 444, 1477, 1776, 1938, 1954, 2142, 2519
BtsIMutI CAGTG 3 cut(s) 552, 1624, 2138
BveI ACCTGC 1 cut(s) 833
Cac8I GCNNGC 4 cut(s) 899, 1229, 1743, 1886
CaiI CAGNNNCTG 1 cut(s) 1237
CciI TCATGA 2 cut(s) 738, 814
CfoI GCGC 3 cut(s) 1305, 1848, 2085
CsiI ACCWGGT 1 cut(s) 417
Csp6I GTAC 6 cut(s) 222, 775, 879, 1854, 1877, 2099
CviQI GTAC 6 cut(s) 222, 775, 879, 1854, 1877, 2099
DdeI CTNAG 9 cut(s) 51, 343, 375, 407, 1073, 1250, 1488, 1812, 2120
Eam1104I CTCTTC 5 cut(s) 1816, 1917, 2176, 2330, 2346
EarI CTCTTC 5 cut(s) 1816, 1917, 2176, 2330, 2346
EciI GGCGGA 1 cut(s) 1664
Eco130I CCWWGG 2 cut(s) 1573, 1770
Eco147I AGGCCT 2 cut(s) 71, 1572
Eco24I GRGCYC 3 cut(s) 625, 1200, 1663
Eco47I GGWCC 5 cut(s) 277, 557, 912, 1639, 1654
Eco57I CTGAAG 3 cut(s) 246, 264, 2370
Eco88I CYCGRG 1 cut(s) 2009
EcoO109I RGGNCCY 1 cut(s) 427
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 6 cut(s) 66, 417, 1108, 1779, 2326, 2461
EcoT14I CCWWGG 2 cut(s) 1573, 1770
EcoT38I GRGCYC 3 cut(s) 625, 1200, 1663
ErhI CCWWGG 2 cut(s) 1573, 1770
Esp3I CGTCTC 1 cut(s) 1418
FaqI GGGAC 3 cut(s) 898, 1513, 1882
FauI CCCGC 1 cut(s) 1369
FbaI TGATCA 3 cut(s) 3, 85, 1032
FblI GTMKAC 2 cut(s) 1045, 1354
Fnu4HI GCNGC 8 cut(s) 183, 194, 332, 636, 1247, 1908, 2068, 2385
FokI GGATG 7 cut(s) 335, 451, 1484, 1763, 1945, 1961, 2149
FriOI GRGCYC 3 cut(s) 625, 1200, 1663
Fsp4HI GCNGC 8 cut(s) 183, 194, 332, 636, 1247, 1908, 2068, 2385
FspBI CTAG 1 cut(s) 627
FspI TGCGCA 1 cut(s) 1847
GlaI GCGC 3 cut(s) 1304, 1847, 2084
GluI GCNGC 8 cut(s) 183, 194, 332, 636, 1247, 1908, 2068, 2385
GsuI CTGGAG 3 cut(s) 1509, 1587, 2409
HaeIII GGCC 9 cut(s) 71, 429, 584, 1063, 1572, 1661, 1784, 2118, 2410
HapII CCGG 2 cut(s) 1657, 1785
HhaI GCGC 3 cut(s) 1305, 1848, 2085
Hin1I GRCGYC 1 cut(s) 655
Hin6I GCGC 3 cut(s) 1303, 1846, 2083
HinP1I GCGC 3 cut(s) 1303, 1846, 2083
HincII GTYRAC 3 cut(s) 873, 2322, 2458
HindII GTYRAC 3 cut(s) 873, 2322, 2458
HindIII AAGCTT 1 cut(s) 2171
HinfI GANTC 9 cut(s) 239, 287, 811, 1386, 1408, 1501, 1529, 1627, 2269
HpaI GTTAAC 1 cut(s) 2458
HpaII CCGG 2 cut(s) 1657, 1785
HphI GGTGA 2 cut(s) 260, 382
Hpy166II GTNNAC 6 cut(s) 277, 873, 1046, 1355, 2322, 2458
Hpy8I GTNNAC 6 cut(s) 277, 873, 1046, 1355, 2322, 2458
Hpy99I CGWCG 1 cut(s) 861
HpyAV CCTTC 8 cut(s) 239, 574, 692, 788, 938, 1075, 1115, 1953
HpyCH4III ACNGT 5 cut(s) 308, 1603, 1619, 2103, 2133
HpyCH4IV ACGT 1 cut(s) 655
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 47, 77, 581, 620, 986
HpyF3I CTNAG 9 cut(s) 51, 343, 375, 407, 1073, 1250, 1488, 1812, 2120
HpySE526I ACGT 1 cut(s) 655
Hsp92I GRCGYC 1 cut(s) 655
HspAI GCGC 3 cut(s) 1303, 1846, 2083
KpnI GGTACC 1 cut(s) 882
Ksp22I TGATCA 3 cut(s) 3, 85, 1032
KspAI GTTAAC 1 cut(s) 2458
LguI GCTCTTC 1 cut(s) 2346
LmnI GCTCC 6 cut(s) 179, 580, 628, 1528, 2156, 2297
Lsp1109I GCAGC 6 cut(s) 169, 622, 1258, 1894, 2079, 2396
LweI GCATC 3 cut(s) 1334, 1756, 2079
MabI ACCWGGT 1 cut(s) 417
MaeI CTAG 1 cut(s) 627
MaeII ACGT 1 cut(s) 655
MaeIII GTNAC 6 cut(s) 311, 370, 550, 1136, 1174, 1262
MflI RGATCY 1 cut(s) 1979
MhlI GDGCHC 6 cut(s) 625, 826, 1200, 1383, 1559, 1663
MlyI GAGTC 3 cut(s) 233, 1402, 1495
MmeI TCCRAC 3 cut(s) 243, 1693, 1812
MslI CAYNNNNRTG 2 cut(s) 104, 819
MspA1I CMGCKG 3 cut(s) 193, 331, 2387
MspI CCGG 2 cut(s) 1657, 1785
MspR9I CCNGG 7 cut(s) 68, 419, 1110, 1658, 1781, 2328, 2463
Mva1269I GAATGC 1 cut(s) 211
MvaI CCWGG 6 cut(s) 68, 419, 1110, 1781, 2328, 2463
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 6 cut(s) 25, 47, 77, 581, 620, 986
NciI CCSGG 1 cut(s) 1658
NlaIV GGNNCC 9 cut(s) 65, 559, 576, 624, 880, 914, 1661, 2007, 2467
NmuCI GTSAC 4 cut(s) 311, 370, 550, 1136
NsbI TGCGCA 1 cut(s) 1847
NspI RCATGY 2 cut(s) 1144, 1300
PagI TCATGA 2 cut(s) 738, 814
PceI AGGCCT 2 cut(s) 71, 1572
PciI ACATGT 2 cut(s) 1140, 1296
PciSI GCTCTTC 1 cut(s) 2346
PctI GAATGC 1 cut(s) 211
PfeI GAWTC 6 cut(s) 287, 811, 1386, 1529, 1627, 2269
PfoI TCCNGGA 1 cut(s) 1108
PkrI GCNGC 8 cut(s) 184, 195, 333, 637, 1248, 1909, 2069, 2386
PleI GAGTC 3 cut(s) 233, 1402, 1495
PpsI GAGTC 3 cut(s) 233, 1402, 1495
PscI ACATGT 2 cut(s) 1140, 1296
PshAI GACNNNNGTC 1 cut(s) 2344
PsiI TTATAA 1 cut(s) 1293
Psp6I CCWGG 6 cut(s) 66, 417, 1108, 1779, 2326, 2461
PspGI CCWGG 6 cut(s) 66, 417, 1108, 1779, 2326, 2461
PspN4I GGNNCC 9 cut(s) 65, 559, 576, 624, 880, 914, 1661, 2007, 2467
PspOMI GGGCCC 1 cut(s) 1659
PstNI CAGNNNCTG 1 cut(s) 1237
PsuI RGATCY 1 cut(s) 1979
PvuII CAGCTG 1 cut(s) 2387
RsaI GTAC 6 cut(s) 223, 776, 880, 1855, 1878, 2100
RsaNI GTAC 6 cut(s) 222, 775, 879, 1854, 1877, 2099
RseI CAYNNNNRTG 2 cut(s) 104, 819
SapI GCTCTTC 1 cut(s) 2346
SatI GCNGC 8 cut(s) 183, 194, 332, 636, 1247, 1908, 2068, 2385
SchI GAGTC 3 cut(s) 233, 1402, 1495
ScrFI CCNGG 7 cut(s) 68, 419, 1110, 1658, 1781, 2328, 2463
SduI GDGCHC 6 cut(s) 625, 826, 1200, 1383, 1559, 1663
SexAI ACCWGGT 1 cut(s) 417
SfaNI GCATC 3 cut(s) 1334, 1756, 2079
SfcI CTRYAG 2 cut(s) 1975, 2145
SinI GGWCC 5 cut(s) 277, 557, 912, 1639, 1654
SmiMI CAYNNNNRTG 2 cut(s) 104, 819
SmlI CTYRAG 2 cut(s) 1119, 1552
SmoI CTYRAG 2 cut(s) 1119, 1552
SseBI AGGCCT 2 cut(s) 71, 1572
SsiI CCGC 7 cut(s) 166, 193, 331, 989, 1376, 1649, 1900
SspMI CTAG 1 cut(s) 627
StuI AGGCCT 2 cut(s) 71, 1572
StyD4I CCNGG 7 cut(s) 66, 417, 1108, 1656, 1779, 2326, 2461
StyI CCWWGG 2 cut(s) 1573, 1770
TaaI ACNGT 5 cut(s) 308, 1603, 1619, 2103, 2133
TaiI ACGT 1 cut(s) 658
TaqI TCGA 6 cut(s) 1200, 1465, 1614, 1722, 2168, 2434
TatI WGTACW 1 cut(s) 2098
TauI GCSGC 2 cut(s) 196, 334
TfiI GAWTC 6 cut(s) 287, 811, 1386, 1529, 1627, 2269
TscAI CASTG 3 cut(s) 559, 1624, 2138
TseFI GTSAC 4 cut(s) 311, 370, 550, 1136
TseI GCWGC 6 cut(s) 182, 635, 1246, 1907, 2067, 2384
Tsp45I GTSAC 4 cut(s) 311, 370, 550, 1136
TspGWI ACGGA 1 cut(s) 2271
TspRI CASTG 3 cut(s) 559, 1624, 2138
VpaK11BI GGWCC 5 cut(s) 277, 557, 912, 1639, 1654
XapI RAATTY 6 cut(s) 608, 704, 958, 1431, 1514, 2491
XceI RCATGY 2 cut(s) 1144, 1300
XmiI GTMKAC 2 cut(s) 1045, 1354
XspI CTAG 1 cut(s) 627
ZraI GACGTC 1 cut(s) 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.