pycom13g18870
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
14890818 .. 14896942
6125 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g18870.5

Sequence Viewer

Length: 1389 bp
ATGGATCATGTAATTGGTGGGAAGTTTAAGCTAGGACGAAAGATCGGTAGTGGATCGTTTGGAGAGCTTTATTTGGGTGTTAATGTACAAACTGGAGAGGAGGTAGCTGTCAAGCTGGAACCAGTGAAGACAAAACACCCCCAGCTTCATTATGAGTCAAAGTTATACATGCTTCTTCAAGGAGGAACGGGTGTACCCCATCTTAAATGGTTCGGTGTTGAGGGTGAATACAATGTCATGGTTATTGACCTGCTTGGTCCCAGCCTTGAAGACCTGTTCAACTATTGCAATCGGAAGTTCTCATTGAAGACGGTTTTGATGCTTGCAGATCAATTAATAAACAGAGTTGAGTACATGCACTCACGGGGGTTTCTTCACCGTGATATAAAGCCTGATAACTTTTTAATGGGCCTGGGACGCAAAGCTAATCAGGTATATATCATTGATTATGGCCTTGCAAAAAAGTATAGAGATCTTCAAACGCACAAGCACATACCATACAGGGAAAACAAGAATCTGACAGGGACAGCCCGCTATGCTAGTGTTAACACTCACCTTGGCGTTGAGCAAAGCAGAAGGGATGATCTAGAGTCTCTTGGTTTTGTACTCATGTATTTTCTGAGGGGGAGCCTTCCCTGGCAGGGCTTGAAAGCAGGTACAAAAAAGCAAAAATATGACAAGATCAGTGAGAAGAAGATGCTAACTCCAATTGAGGTGCTCTGCAGATCATATCCTTCAGAATTTACATCGTACTTCCATTATTGTCGATCATTGCGCTTTGAAGATAAACCAGATTATTCGTACTTGAAGAGGCTTTTCCGGGACCTTTTTATTCGAGAAGGGTATCAATTTGACTATGTATTTGATTGGACTATATTGAAGTATCCTCAAATTGGCTCCAGTTCTAGAACACGACCTAGTACAAAACCAGTTTTAAACCCTGGACCATCTGCAGAAAGAACAGAAAGACCTACAGCAGTGGCACAAGATTTTCGAGAAAGACTCTCAGGTGCAGTAGAGGCATTTTCTAGAAGGAATAGTGCTGGTCATGGTTATGGCGATCACTCCAGACATAGGTCGACTGATGATGCGCCATCGTCCAAAGACGTCCAAGCTGATTCAGAAAGGGCTCGTAGTTCATCTAGAAATGGCAGTAGTTCAAAGAGGCCAGTCATATCAAGCAGCCGGCCAAGCTCATCTGGTGAGCCCAGCGAGAGTCGGTCAAGCCGGCTGGTCTCAAGTAGTGGCCGCCTGTCCACCACCCAAAGGGTTCAACCTGGGTATGAACCCAAAACATCTTTCACCCGAGCATCCGCTGCAAGAGGTGGCCGTGATGACACACTTCGGAGCTTTGAACTCCTTTCAATCGGCACGGGAAAGAGGAAGTAA

Protein Analysis

463

Amino Acids

52.41

Weight (kDa)

9.76

Isoelectric Point (pI)

50.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1110
Acc36I ACCTGC 2 cut(s) 258, 644
AccI GTMKAC 1 cut(s) 1079
AciI CCGC 3 cut(s) 532, 1249, 1314
AclWI GGATC 2 cut(s) 12, 61
AcoI YGGCCR 3 cut(s) 1187, 1246, 1327
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 1 cut(s) 720
AcyI GRCGYC 1 cut(s) 1107
AfaI GTAC 8 cut(s) 87, 195, 353, 606, 658, 752, 803, 922
AfiI CCNNNNNNNGG 4 cut(s) 641, 893, 1074, 1266
AjnI CCWGG 4 cut(s) 411, 635, 940, 1276
AjuI GAANNNNNNNTTGG 2 cut(s) 1283, 1315
AluBI AGCT 9 cut(s) 31, 67, 107, 115, 145, 425, 1115, 1194, 1350
AluI AGCT 9 cut(s) 31, 67, 107, 115, 145, 425, 1115, 1194, 1350
Alw21I GWGCWC 1 cut(s) 720
Alw26I GTCTC 2 cut(s) 597, 1240
AlwI GGATC 2 cut(s) 12, 61
Ama87I CYCGRG 1 cut(s) 1305
AoxI GGCC 6 cut(s) 409, 451, 1166, 1187, 1246, 1327
ApeKI GCWGC 2 cut(s) 1182, 1316
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
AseI ATTAAT 1 cut(s) 335
AspLEI GCGC 2 cut(s) 777, 1093
AspS9I GGNCC 4 cut(s) 257, 409, 823, 944
AsuC2I CCSGG 1 cut(s) 821
AsuHPI GGTGA 5 cut(s) 236, 368, 545, 1214, 1294
AvaI CYCGRG 1 cut(s) 1305
AvaII GGWCC 3 cut(s) 257, 823, 944
BaeI ACNNNNGTAYC 2 cut(s) 177, 210
BanII GRGCYC 2 cut(s) 1132, 1209
BbsI GAAGAC 3 cut(s) 134, 276, 314
Bbv12I GWGCWC 1 cut(s) 720
BbvI GCAGC 2 cut(s) 1194, 1303
BccI CCATC 3 cut(s) 207, 955, 1102
BceAI ACGGC 1 cut(s) 1314
BciT130I CCWGG 4 cut(s) 413, 637, 942, 1278
BciVI GTATCC 1 cut(s) 894
BcnI CCSGG 1 cut(s) 821
BcoDI GTCTC 2 cut(s) 597, 1240
BfaI CTAG 7 cut(s) 32, 540, 587, 906, 918, 1029, 1143
BfmI CTRYAG 3 cut(s) 721, 951, 972
BfuAI ACCTGC 2 cut(s) 258, 644
BfuI GTATCC 1 cut(s) 894
BglII AGATCT 1 cut(s) 472
BisI GCNGC 3 cut(s) 1183, 1249, 1317
BlsI GCNGC 3 cut(s) 1184, 1250, 1318
Bme1390I CCNGG 5 cut(s) 413, 637, 821, 942, 1278
Bme18I GGWCC 3 cut(s) 257, 823, 944
BmeT110I CYCGRG 1 cut(s) 1305
BmgT120I GGNCC 4 cut(s) 257, 409, 823, 944
BmiI GGNNCC 5 cut(s) 120, 259, 629, 824, 898
BmrFI CCNGG 5 cut(s) 413, 637, 821, 942, 1278
BmsI GCATC 4 cut(s) 309, 687, 1078, 1319
BoxI GACNNNNGTC 1 cut(s) 1075
BpiI GAAGAC 3 cut(s) 134, 276, 314
BplI GAGNNNNNCTC 2 cut(s) 987, 1019
BpmI CTGGAG 3 cut(s) 114, 883, 1051
BpuEI CTTGAG 1 cut(s) 1222
BpuMI CCSGG 1 cut(s) 821
BsaHI GRCGYC 1 cut(s) 1107
BsaI GGTCTC 1 cut(s) 1240
BsaJI CCNNGG 5 cut(s) 412, 556, 635, 940, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 4 cut(s) 641, 893, 1074, 1266
Bse118I RCCGGY 2 cut(s) 1185, 1227
Bse1I ACTGG 5 cut(s) 97, 122, 900, 929, 1169
Bse3DI GCAATG 1 cut(s) 770
BseBI CCWGG 4 cut(s) 413, 637, 942, 1278
BseDI CCNNGG 5 cut(s) 412, 556, 635, 940, 1277
BseGI GGATG 2 cut(s) 586, 1310
BseLI CCNNNNNNNGG 4 cut(s) 641, 893, 1074, 1266
BseMI GCAATG 1 cut(s) 770
BseMII CTCAG 2 cut(s) 611, 1020
BseNI ACTGG 5 cut(s) 97, 122, 900, 929, 1169
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 2 cut(s) 1194, 1303
BseYI CCCAGC 3 cut(s) 141, 260, 1208
BsgI GTGCAG 1 cut(s) 1032
BshFI GGCC 6 cut(s) 411, 453, 1168, 1189, 1248, 1329
BsiHKAI GWGCWC 1 cut(s) 720
BsiHKCI CYCGRG 1 cut(s) 1305
BsiSI CCGG 3 cut(s) 820, 1186, 1228
BslFI GGGAC 4 cut(s) 243, 429, 538, 836
BslI CCNNNNNNNGG 4 cut(s) 641, 893, 1074, 1266
BsmAI GTCTC 2 cut(s) 597, 1240
BsmFI GGGAC 4 cut(s) 243, 429, 538, 836
BsnI GGCC 6 cut(s) 411, 453, 1168, 1189, 1248, 1329
Bso31I GGTCTC 1 cut(s) 1240
BsoBI CYCGRG 1 cut(s) 1305
Bsp1286I GDGCHC 3 cut(s) 720, 1132, 1209
Bsp1407I TGTACA 1 cut(s) 85
BspACI CCGC 3 cut(s) 532, 1249, 1314
BspANI GGCC 6 cut(s) 411, 453, 1168, 1189, 1248, 1329
BspCNI CTCAG 2 cut(s) 612, 1019
BspLI GGNNCC 5 cut(s) 120, 259, 629, 824, 898
BspMAI CTGCAG 2 cut(s) 725, 955
BspMI ACCTGC 2 cut(s) 258, 644
BspPI GGATC 2 cut(s) 12, 61
BspTNI GGTCTC 1 cut(s) 1240
BsrDI GCAATG 1 cut(s) 770
BsrFI RCCGGY 2 cut(s) 1185, 1227
BsrGI TGTACA 1 cut(s) 85
BsrI ACTGG 5 cut(s) 97, 122, 900, 929, 1169
BssAI RCCGGY 2 cut(s) 1185, 1227
BssECI CCNNGG 5 cut(s) 412, 556, 635, 940, 1277
BssNI GRCGYC 1 cut(s) 1107
BssT1I CCWWGG 1 cut(s) 556
Bst2UI CCWGG 4 cut(s) 413, 637, 942, 1278
Bst4CI ACNGT 2 cut(s) 313, 380
Bst6I CTCTTC 1 cut(s) 803
BstACI GRCGYC 1 cut(s) 1107
BstAPI GCANNNNNTGC 1 cut(s) 1316
BstAUI TGTACA 1 cut(s) 85
BstC8I GCNNGC 4 cut(s) 324, 532, 1187, 1229
BstDEI CTNAG 2 cut(s) 620, 1006
BstF5I GGATG 2 cut(s) 586, 1310
BstHHI GCGC 2 cut(s) 777, 1093
BstMAI GTCTC 2 cut(s) 597, 1240
BstMWI GCNNNNNNNGC 5 cut(s) 417, 536, 1019, 1191, 1316
BstNI CCWGG 4 cut(s) 413, 637, 942, 1278
BstNSI RCATGY 2 cut(s) 172, 358
BstPAI GACNNNNGTC 1 cut(s) 1075
BstSCI CCNGG 5 cut(s) 411, 635, 819, 940, 1276
BstSFI CTRYAG 3 cut(s) 721, 951, 972
BstV1I GCAGC 2 cut(s) 1194, 1303
BstV2I GAAGAC 3 cut(s) 134, 276, 314
BstX2I RGATCY 1 cut(s) 472
BstYI RGATCY 1 cut(s) 472
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 6 cut(s) 411, 453, 1168, 1189, 1248, 1329
BtsCI GGATG 2 cut(s) 586, 1310
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 3 cut(s) 129, 691, 984
BveI ACCTGC 2 cut(s) 258, 644
Cac8I GCNNGC 4 cut(s) 324, 532, 1187, 1229
CfoI GCGC 2 cut(s) 777, 1093
Cfr10I RCCGGY 2 cut(s) 1185, 1227
Cfr13I GGNCC 4 cut(s) 257, 409, 823, 944
CseI GACGC 1 cut(s) 426
Csp6I GTAC 8 cut(s) 86, 194, 352, 605, 657, 751, 802, 921
CviAII CATG 6 cut(s) 8, 169, 238, 355, 610, 1049
CviQI GTAC 8 cut(s) 86, 194, 352, 605, 657, 751, 802, 921
DdeI CTNAG 2 cut(s) 620, 1006
DraI TTTAAA 1 cut(s) 936
EaeI YGGCCR 3 cut(s) 1187, 1246, 1327
Eam1104I CTCTTC 1 cut(s) 803
EarI CTCTTC 1 cut(s) 803
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 2 cut(s) 1132, 1209
Eco31I GGTCTC 1 cut(s) 1240
Eco47I GGWCC 3 cut(s) 257, 823, 944
Eco57I CTGAAG 1 cut(s) 720
Eco88I CYCGRG 1 cut(s) 1305
EcoO109I RGGNCCY 1 cut(s) 823
EcoRII CCWGG 4 cut(s) 411, 635, 940, 1276
EcoT14I CCWWGG 1 cut(s) 556
EcoT38I GRGCYC 2 cut(s) 1132, 1209
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 6 cut(s) 11, 172, 241, 358, 613, 1052
FaqI GGGAC 4 cut(s) 243, 429, 538, 836
FatI CATG 6 cut(s) 7, 168, 237, 354, 609, 1048
FauI CCCGC 1 cut(s) 539
FblI GTMKAC 1 cut(s) 1079
Fnu4HI GCNGC 3 cut(s) 1183, 1249, 1317
FokI GGATG 2 cut(s) 593, 1297
FriOI GRGCYC 2 cut(s) 1132, 1209
Fsp4HI GCNGC 3 cut(s) 1183, 1249, 1317
FspBI CTAG 7 cut(s) 32, 540, 587, 906, 918, 1029, 1143
GlaI GCGC 2 cut(s) 776, 1092
GluI GCNGC 3 cut(s) 1183, 1249, 1317
GsaI CCCAGC 3 cut(s) 145, 264, 1212
GsuI CTGGAG 3 cut(s) 114, 883, 1051
HaeIII GGCC 6 cut(s) 411, 453, 1168, 1189, 1248, 1329
HapII CCGG 3 cut(s) 820, 1186, 1228
HgaI GACGC 1 cut(s) 426
HhaI GCGC 2 cut(s) 777, 1093
Hin1I GRCGYC 1 cut(s) 1107
Hin1II CATG 6 cut(s) 11, 172, 241, 358, 613, 1052
Hin6I GCGC 2 cut(s) 775, 1091
HinP1I GCGC 2 cut(s) 775, 1091
HincII GTYRAC 2 cut(s) 547, 1080
HindII GTYRAC 2 cut(s) 547, 1080
HinfI GANTC 6 cut(s) 155, 514, 590, 1002, 1118, 1216
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 3 cut(s) 820, 1186, 1228
HphI GGTGA 5 cut(s) 236, 368, 545, 1214, 1294
Hpy166II GTNNAC 4 cut(s) 194, 547, 1080, 1257
Hpy188I TCNGA 6 cut(s) 294, 519, 621, 739, 1123, 1347
Hpy188III TCNNGA 7 cut(s) 587, 836, 906, 995, 1029, 1068, 1143
Hpy8I GTNNAC 4 cut(s) 194, 547, 1080, 1257
HpyAV CCTTC 5 cut(s) 570, 641, 744, 833, 1026
HpyCH4III ACNGT 2 cut(s) 313, 380
HpyCH4IV ACGT 1 cut(s) 1107
HpyCH4V TGCA 8 cut(s) 288, 326, 358, 458, 723, 953, 1013, 1319
HpyF10VI GCNNNNNNNGC 5 cut(s) 417, 536, 1019, 1191, 1316
HpyF3I CTNAG 2 cut(s) 620, 1006
HpySE526I ACGT 1 cut(s) 1107
Hsp92I GRCGYC 1 cut(s) 1107
Hsp92II CATG 6 cut(s) 11, 172, 241, 358, 613, 1052
HspAI GCGC 2 cut(s) 775, 1091
KroI GCCGGC 2 cut(s) 1185, 1227
KroNI GCCGGC 2 cut(s) 1187, 1229
KspAI GTTAAC 1 cut(s) 547
LmnI GCTCC 3 cut(s) 627, 902, 1347
Lsp1109I GCAGC 2 cut(s) 1194, 1303
LweI GCATC 4 cut(s) 309, 687, 1078, 1319
MaeI CTAG 7 cut(s) 32, 540, 587, 906, 918, 1029, 1143
MaeII ACGT 1 cut(s) 1107
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 472
MhlI GDGCHC 3 cut(s) 720, 1132, 1209
MluCI AATT 6 cut(s) 12, 332, 708, 740, 848, 891
MlyI GAGTC 4 cut(s) 164, 599, 996, 1225
MroNI GCCGGC 2 cut(s) 1185, 1227
MseI TTAA 7 cut(s) 27, 81, 204, 335, 404, 546, 935
MslI CAYNNNNRTG 1 cut(s) 1053
MspA1I CMGCKG 1 cut(s) 1316
MspI CCGG 3 cut(s) 820, 1186, 1228
MspR9I CCNGG 5 cut(s) 413, 637, 821, 942, 1278
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 4 cut(s) 413, 637, 942, 1278
MwoI GCNNNNNNNGC 5 cut(s) 417, 536, 1019, 1191, 1316
NaeI GCCGGC 2 cut(s) 1187, 1229
NciI CCSGG 1 cut(s) 821
NgoMIV GCCGGC 2 cut(s) 1185, 1227
NlaIII CATG 6 cut(s) 11, 172, 241, 358, 613, 1052
NlaIV GGNNCC 5 cut(s) 120, 259, 629, 824, 898
NspI RCATGY 2 cut(s) 172, 358
PdiI GCCGGC 2 cut(s) 1187, 1229
PfeI GAWTC 2 cut(s) 514, 1118
PfoI TCCNGGA 1 cut(s) 819
PkrI GCNGC 3 cut(s) 1184, 1250, 1318
PleI GAGTC 4 cut(s) 163, 598, 996, 1224
PpsI GAGTC 4 cut(s) 163, 598, 996, 1224
PpuMI RGGWCCY 1 cut(s) 823
PshAI GACNNNNGTC 1 cut(s) 1075
PshBI ATTAAT 1 cut(s) 335
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 4 cut(s) 411, 635, 940, 1276
PspFI CCCAGC 3 cut(s) 141, 260, 1208
PspGI CCWGG 4 cut(s) 411, 635, 940, 1276
PspN4I GGNNCC 5 cut(s) 120, 259, 629, 824, 898
PspPI GGNCC 4 cut(s) 257, 409, 823, 944
PspPPI RGGWCCY 1 cut(s) 823
PstI CTGCAG 2 cut(s) 725, 955
PsuI RGATCY 1 cut(s) 472
RsaI GTAC 8 cut(s) 87, 195, 353, 606, 658, 752, 803, 922
RsaNI GTAC 8 cut(s) 86, 194, 352, 605, 657, 751, 802, 921
RseI CAYNNNNRTG 1 cut(s) 1053
SalI GTCGAC 1 cut(s) 1078
SaqAI TTAA 7 cut(s) 27, 81, 204, 335, 404, 546, 935
SatI GCNGC 3 cut(s) 1183, 1249, 1317
Sau96I GGNCC 4 cut(s) 257, 409, 823, 944
SchI GAGTC 4 cut(s) 164, 599, 996, 1225
ScrFI CCNGG 5 cut(s) 413, 637, 821, 942, 1278
SduI GDGCHC 3 cut(s) 720, 1132, 1209
SfaNI GCATC 4 cut(s) 309, 687, 1078, 1319
SfcI CTRYAG 3 cut(s) 721, 951, 972
SinI GGWCC 3 cut(s) 257, 823, 944
SmiMI CAYNNNNRTG 1 cut(s) 1053
SmlI CTYRAG 1 cut(s) 1237
SmoI CTYRAG 1 cut(s) 1237
Sse9I AATT 6 cut(s) 12, 332, 708, 740, 848, 891
SsiI CCGC 3 cut(s) 532, 1249, 1314
SspMI CTAG 7 cut(s) 32, 540, 587, 906, 918, 1029, 1143
StyD4I CCNGG 5 cut(s) 411, 635, 819, 940, 1276
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 2 cut(s) 313, 380
TaiI ACGT 1 cut(s) 1110
TaqI TCGA 4 cut(s) 766, 835, 994, 1079
TaqII GACCGA 1 cut(s) 1209
TasI AATT 6 cut(s) 12, 332, 708, 740, 848, 891
TatI WGTACW 4 cut(s) 85, 351, 604, 920
TauI GCSGC 1 cut(s) 1251
TfiI GAWTC 2 cut(s) 514, 1118
Tru1I TTAA 7 cut(s) 27, 81, 204, 335, 404, 546, 935
Tru9I TTAA 7 cut(s) 27, 81, 204, 335, 404, 546, 935
TscAI CASTG 3 cut(s) 129, 691, 984
TseI GCWGC 2 cut(s) 1182, 1316
TspDTI ATGAA 3 cut(s) 137, 1128, 1299
TspRI CASTG 3 cut(s) 129, 691, 984
VpaK11BI GGWCC 3 cut(s) 257, 823, 944
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 4 cut(s) 586, 905, 1028, 1142
XceI RCATGY 2 cut(s) 172, 358
XmiI GTMKAC 1 cut(s) 1079
XspI CTAG 7 cut(s) 32, 540, 587, 906, 918, 1029, 1143
ZraI GACGTC 1 cut(s) 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.