Rh5AG368700
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
62232447 .. 62235465
3019 bp
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UTR
Exon/CDS
Intron
Rh5AG368700.1

Sequence Viewer

Length: 309 bp
ATGATTGCAGGTAATTTAGTAACACAAAATTTTCATGTTGTGTTGTATGAATGCTGCAGAGAAAACAAGAATTTGATTGGAACAGCAAGATATGCAAGCATGAACACCCACCTTGGGATTGGTATGTTTCAATCATTCCTTTTGTATTTTGGTGTTCTTTGTAATGTAATGTTGTTCCAGTTAAGTGTTATATCTCATTTAGTAACGATTTCTGCTCTTTTGAACTTTATAGAGCAAAGGCGGAGGGATGATTTGGAATCTCTTGGTTACGTCCTGATGTACTTCCTTAAGGGAAGGTGTATCTCTTAA

Protein Analysis

102

Amino Acids

11.69

Weight (kDa)

8.44

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 241
AcsI RAATTY 2 cut(s) 28, 70
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 1 cut(s) 114
AflII CTTAAG 1 cut(s) 287
AgsI TTSAA 2 cut(s) 131, 223
ApeKI GCWGC 1 cut(s) 54
ApoI RAATTY 2 cut(s) 28, 70
BbvI GCAGC 1 cut(s) 41
BfmI CTRYAG 1 cut(s) 55
BfrI CTTAAG 1 cut(s) 287
BisI GCNGC 1 cut(s) 55
BlsI GCNGC 1 cut(s) 56
BsaJI CCNNGG 1 cut(s) 112
Bsc4I CCNNNNNNNGG 1 cut(s) 114
Bse1I ACTGG 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 112
BseGI GGATG 1 cut(s) 253
BseLI CCNNNNNNNGG 1 cut(s) 114
BseNI ACTGG 1 cut(s) 178
BseXI GCAGC 1 cut(s) 41
BslI CCNNNNNNNGG 1 cut(s) 114
BsmI GAATGC 1 cut(s) 56
BspACI CCGC 1 cut(s) 241
BspMAI CTGCAG 1 cut(s) 59
BspTI CTTAAG 1 cut(s) 287
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 1 cut(s) 112
BssT1I CCWWGG 1 cut(s) 112
BstAFI CTTAAG 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 97
BstF5I GGATG 1 cut(s) 253
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstSFI CTRYAG 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 41
BtsCI GGATG 1 cut(s) 253
Cac8I GCNNGC 1 cut(s) 97
Csp6I GTAC 1 cut(s) 280
CviAII CATG 2 cut(s) 35, 100
CviQI GTAC 1 cut(s) 280
EciI GGCGGA 1 cut(s) 256
Eco130I CCWWGG 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 112
ErhI CCWWGG 1 cut(s) 112
FaeI CATG 2 cut(s) 38, 103
FaiI YATR 7 cut(s) 36, 48, 93, 101, 125, 191, 230
FatI CATG 2 cut(s) 34, 99
Fnu4HI GCNGC 1 cut(s) 55
FokI GGATG 1 cut(s) 260
Fsp4HI GCNGC 1 cut(s) 55
GluI GCNGC 1 cut(s) 55
Hin1II CATG 2 cut(s) 38, 103
HinfI GANTC 1 cut(s) 257
Hpy188III TCNNGA 1 cut(s) 274
HpyAV CCTTC 1 cut(s) 288
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 3 cut(s) 8, 57, 95
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
HpySE526I ACGT 1 cut(s) 270
Hsp92II CATG 2 cut(s) 38, 103
LpnPI CCDG 2 cut(s) 191, 287
Lsp1109I GCAGC 1 cut(s) 41
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 3 cut(s) 19, 202, 266
MluCI AATT 3 cut(s) 13, 28, 70
MnlI CCTC 1 cut(s) 237
MseI TTAA 3 cut(s) 182, 288, 307
MspCI CTTAAG 1 cut(s) 287
Mva1269I GAATGC 1 cut(s) 56
MwoI GCNNNNNNNGC 1 cut(s) 92
NlaIII CATG 2 cut(s) 38, 103
PctI GAATGC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 1 cut(s) 56
PstI CTGCAG 1 cut(s) 59
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
SaqAI TTAA 3 cut(s) 182, 288, 307
SatI GCNGC 1 cut(s) 55
SetI ASST 4 cut(s) 13, 114, 273, 299
SfcI CTRYAG 1 cut(s) 55
SmlI CTYRAG 1 cut(s) 287
SmoI CTYRAG 1 cut(s) 287
Sse9I AATT 3 cut(s) 13, 28, 70
SsiI CCGC 1 cut(s) 241
StyI CCWWGG 1 cut(s) 112
TaiI ACGT 1 cut(s) 273
TasI AATT 3 cut(s) 13, 28, 70
TatI WGTACW 1 cut(s) 279
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 3 cut(s) 182, 288, 307
Tru9I TTAA 3 cut(s) 182, 288, 307
TseI GCWGC 1 cut(s) 54
TspDTI ATGAA 3 cut(s) 23, 63, 116
Vha464I CTTAAG 1 cut(s) 287
XapI RAATTY 2 cut(s) 28, 70
XcmI CCANNNNNNNNNTGG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.