Rh4BG045000
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
8045462 .. 8051708
6247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG045000.1

Sequence Viewer

Length: 1389 bp
ATGGAGCATGTTATCGGAGGCAAGTTTAAGCTGGGGAGAAAGATCGGAAGTGGATCGTTTGGAGAGCTTTATTTGGGGATTAATGTACAAACTGGAGAGGAGGTGGCTGTGAAGCTGGAACCCGTGAAGACAAAACACCCACAGCTTCACTATGAGTCAAAGTTGTACATGCTTCTTCAAGGAGGAACGGGTGTACCCCATCTTAAATGGTTCGGAGTTGAGGGTGAATATAATGTCATGGTTATTGACCTTCTTGGCCCAAGCCTAGAAGACTTGTTCAACTATTGCAATCGGAAGTTCACTTTGAAGACAGTTTTAATGCTTGCAGATCAATTAATTAACCGAGTGGAGTACATGCACTCACGGGGATTTCTTCACCGTGACATAAAGCCTGACAACTTCTTAATGGGTCTGGGGCGTAAAGCTAATCAGGTGTATATCATTGATTATGGCCTTGCAAAAAAGTATAGAGATCTTCAAACGCATAAGCACATACCATATAGGGAAAATAAGAATCTGACAGGAACAGCTCGCTATGCAAGTGTTAACACTCACCTTGGTGTTGAGCAAAGCAGGAGAGATGATCTGGAATCTCTTGGTTATGTGCTTATGTATTTTCTGAGGGGAAGCCTTCCCTGGCAGGGCTTGAAAGCAGGTACCAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATTGAGGTTCTGTGTAAATCATATCCATCAGAATTCACATCTTACTTCCATTATTGTCGCTCATTACGCTTTGAAGATAAACCAGATTATTCATACCTGAAGAGACTTTTCAGGGACCTTTTCATTCGAGAAGGTTATCAATTTGACTATGTATTTGATTGGACAATACTGAAGTATCCACAAATTGGCTCCAGTTCCAGAACACGACAGGCAAGTGCAAAACCAGCTTTGAACCCTGGACCGTCTGCAGAAAGAACAGAAAGGCCTTCAGTGGGACAAGATTTTCGAGATAGATTCTCAGGTGCAGTTGAAGCATTTTCTAGAAGGAATGGTTCTGGGCATGGTTCACATGGTGATAACTCCAGACATAGATCAACTGATGATGCGCCATCATCCAAAGATGTGCAACCTGATTCAGAAAGAATCCGGAGTTCATCTAGAAATGGCAGCACCTCAAAGAGGCCTGTCATATCAAGCAGTAGGCCAAGCTCCTCTGGTGAGCCTAGCGAGAGCCGGTCAAGCCGGCTGGTCTCAAGCAGTGGTCGCCTGTCAACCACCCAAAGGACACCTGGGTATGAATCAAAAGTGTCTTATACTCGTACTTCAGCTGCTAGAGGCGGTCGTGATGATGCACTTAGGAGCTTTGAGCTTCTTTCTATCGGTACGGGGAAGAGGAAATAA

Protein Analysis

462

Amino Acids

52.39

Weight (kDa)

9.74

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 228 7.6e-26 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 270 9.4e-15 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 118 - 206 2e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 644
Acc65I GGTACC 1 cut(s) 656
AccB1I GGYRCC 1 cut(s) 656
AccB7I CCANNNNNTGG 1 cut(s) 893
AccIII TCCGGA 1 cut(s) 1134
AciI CCGC 1 cut(s) 1326
AclWI GGATC 1 cut(s) 61
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 4 cut(s) 827, 899, 960, 1296
AdeI CACNNNGTG 1 cut(s) 1061
AfaI GTAC 7 cut(s) 87, 167, 195, 353, 658, 1309, 1372
AfiI CCNNNNNNNGG 5 cut(s) 641, 893, 980, 1167, 1269
AgsI TTSAA 8 cut(s) 179, 280, 307, 479, 649, 782, 940, 1019
AjnI CCWGG 3 cut(s) 635, 943, 1276
AleI CACNNNNGTG 1 cut(s) 558
Alw26I GTCTC 2 cut(s) 805, 1243
AlwI GGATC 1 cut(s) 61
Aor13HI TCCGGA 1 cut(s) 1134
AoxI GGCC 5 cut(s) 256, 451, 971, 1169, 1190
ApeKI GCWGC 2 cut(s) 1155, 1316
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 4 cut(s) 845, 877, 975, 1007
AseI ATTAAT 2 cut(s) 81, 335
Asp718I GGTACC 1 cut(s) 656
AspLEI GCGC 1 cut(s) 1096
AspS9I GGNCC 3 cut(s) 257, 823, 947
AsuHPI GGTGA 5 cut(s) 236, 368, 545, 1073, 1217
AvaII GGWCC 2 cut(s) 823, 947
BaeI ACNNNNGTAYC 4 cut(s) 177, 210, 866, 899
BanI GGYRCC 1 cut(s) 656
BbsI GAAGAC 3 cut(s) 134, 276, 314
BbvI GCAGC 2 cut(s) 1167, 1303
BccI CCATC 3 cut(s) 207, 742, 1105
BciT130I CCWGG 3 cut(s) 637, 945, 1278
BciVI GTATCC 1 cut(s) 894
BcoDI GTCTC 2 cut(s) 805, 1243
BfaI CTAG 5 cut(s) 266, 1029, 1146, 1212, 1320
BfmI CTRYAG 1 cut(s) 954
BfuAI ACCTGC 1 cut(s) 644
BfuI GTATCC 1 cut(s) 894
BglII AGATCT 1 cut(s) 472
BisI GCNGC 2 cut(s) 1156, 1317
BlsI GCNGC 2 cut(s) 1157, 1318
Bme1390I CCNGG 3 cut(s) 637, 945, 1278
Bme18I GGWCC 2 cut(s) 823, 947
BmgT120I GGNCC 3 cut(s) 257, 823, 947
BmiI GGNNCC 4 cut(s) 120, 658, 824, 898
BmrFI CCNGG 3 cut(s) 637, 945, 1278
BmsI GCATC 3 cut(s) 687, 1081, 1327
BpiI GAAGAC 3 cut(s) 134, 276, 314
BpmI CTGGAG 3 cut(s) 114, 883, 1054
BpuEI CTTGAG 1 cut(s) 1225
BsaI GGTCTC 1 cut(s) 1243
BsaJI CCNNGG 4 cut(s) 556, 635, 943, 1277
BsaWI WCCGGW 1 cut(s) 1134
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 5 cut(s) 641, 893, 980, 1167, 1269
Bse118I RCCGGY 2 cut(s) 1221, 1230
Bse1I ACTGG 2 cut(s) 97, 900
BseAI TCCGGA 1 cut(s) 1134
BseBI CCWGG 3 cut(s) 637, 945, 1278
BseDI CCNNGG 4 cut(s) 556, 635, 943, 1277
BseGI GGATG 1 cut(s) 1100
BseLI CCNNNNNNNGG 5 cut(s) 641, 893, 980, 1167, 1269
BseMII CTCAG 2 cut(s) 611, 1020
BseNI ACTGG 2 cut(s) 97, 900
BseRI GAGGAG 2 cut(s) 113, 1189
BseXI GCAGC 2 cut(s) 1167, 1303
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 1032
Bsh1285I CGRYCG 1 cut(s) 1330
BshFI GGCC 5 cut(s) 258, 453, 973, 1171, 1192
BshNI GGYRCC 1 cut(s) 656
BsiEI CGRYCG 1 cut(s) 1330
BsiSI CCGG 3 cut(s) 1135, 1222, 1231
BslFI GGGAC 2 cut(s) 836, 996
BslI CCNNNNNNNGG 5 cut(s) 641, 893, 980, 1167, 1269
BsmAI GTCTC 2 cut(s) 805, 1243
BsmFI GGGAC 2 cut(s) 836, 996
BsnI GGCC 5 cut(s) 258, 453, 973, 1171, 1192
Bso31I GGTCTC 1 cut(s) 1243
Bsp13I TCCGGA 1 cut(s) 1134
Bsp1407I TGTACA 2 cut(s) 85, 165
Bsp143I GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
BspACI CCGC 1 cut(s) 1326
BspANI GGCC 5 cut(s) 258, 453, 973, 1171, 1192
BspCNI CTCAG 2 cut(s) 612, 1019
BspEI TCCGGA 1 cut(s) 1134
BspLI GGNNCC 4 cut(s) 120, 658, 824, 898
BspMAI CTGCAG 1 cut(s) 958
BspMI ACCTGC 1 cut(s) 644
BspPI GGATC 1 cut(s) 61
BspT107I GGYRCC 1 cut(s) 656
BspTNI GGTCTC 1 cut(s) 1243
BsrFI RCCGGY 2 cut(s) 1221, 1230
BsrGI TGTACA 2 cut(s) 85, 165
BsrI ACTGG 2 cut(s) 97, 900
BssAI RCCGGY 2 cut(s) 1221, 1230
BssECI CCNNGG 4 cut(s) 556, 635, 943, 1277
BssMI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
BssT1I CCWWGG 1 cut(s) 556
Bst2UI CCWGG 3 cut(s) 637, 945, 1278
Bst4CI ACNGT 3 cut(s) 313, 380, 951
Bst6I CTCTTC 2 cut(s) 803, 1373
BstAUI TGTACA 2 cut(s) 85, 165
BstC8I GCNNGC 3 cut(s) 324, 532, 1232
BstDEI CTNAG 3 cut(s) 620, 1006, 1343
BstENI CCTNNNNNAGG 1 cut(s) 1165
BstF5I GGATG 1 cut(s) 1100
BstHHI GCGC 1 cut(s) 1096
BstKTI GATC 7 cut(s) 45, 56, 331, 475, 586, 684, 1082
BstMAI GTCTC 2 cut(s) 805, 1243
BstMBI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
BstMCI CGRYCG 1 cut(s) 1330
BstMWI GCNNNNNNNGC 6 cut(s) 536, 774, 932, 1019, 1227, 1251
BstNI CCWGG 3 cut(s) 637, 945, 1278
BstNSI RCATGY 3 cut(s) 11, 172, 358
BstSCI CCNGG 3 cut(s) 635, 943, 1276
BstSFI CTRYAG 1 cut(s) 954
BstV1I GCAGC 2 cut(s) 1167, 1303
BstV2I GAAGAC 3 cut(s) 134, 276, 314
BstX2I RGATCY 1 cut(s) 472
BstYI RGATCY 1 cut(s) 472
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 5 cut(s) 258, 453, 973, 1171, 1192
BtsCI GGATG 1 cut(s) 1100
BtsI GCAGTG 1 cut(s) 1252
BtsIMutI CAGTG 3 cut(s) 691, 984, 1252
BveI ACCTGC 1 cut(s) 644
Cac8I GCNNGC 3 cut(s) 324, 532, 1232
CfoI GCGC 1 cut(s) 1096
Cfr10I RCCGGY 2 cut(s) 1221, 1230
Cfr13I GGNCC 3 cut(s) 257, 823, 947
Csp6I GTAC 7 cut(s) 86, 166, 194, 352, 657, 1308, 1371
CviAII CATG 6 cut(s) 8, 169, 238, 355, 1049, 1058
CviQI GTAC 7 cut(s) 86, 166, 194, 352, 657, 1308, 1371
DdeI CTNAG 3 cut(s) 620, 1006, 1343
DpnI GATC 7 cut(s) 44, 55, 330, 474, 585, 683, 1081
DpnII GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
DraIII CACNNNGTG 1 cut(s) 1061
Eam1104I CTCTTC 2 cut(s) 803, 1373
EarI CTCTTC 2 cut(s) 803, 1373
Eco130I CCWWGG 1 cut(s) 556
Eco147I AGGCCT 2 cut(s) 973, 1171
Eco31I GGTCTC 1 cut(s) 1243
Eco47I GGWCC 2 cut(s) 823, 947
Eco57I CTGAAG 4 cut(s) 827, 899, 960, 1296
EcoNI CCTNNNNNAGG 1 cut(s) 1165
EcoO109I RGGNCCY 1 cut(s) 823
EcoRI GAATTC 1 cut(s) 740
EcoRII CCWGG 3 cut(s) 635, 943, 1276
EcoT14I CCWWGG 1 cut(s) 556
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 6 cut(s) 11, 172, 241, 358, 1052, 1061
FaqI GGGAC 2 cut(s) 836, 996
FatI CATG 6 cut(s) 7, 168, 237, 354, 1048, 1057
Fnu4HI GCNGC 2 cut(s) 1156, 1317
FokI GGATG 1 cut(s) 1087
Fsp4HI GCNGC 2 cut(s) 1156, 1317
FspBI CTAG 5 cut(s) 266, 1029, 1146, 1212, 1320
GlaI GCGC 1 cut(s) 1095
GluI GCNGC 2 cut(s) 1156, 1317
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 3 cut(s) 114, 883, 1054
HaeIII GGCC 5 cut(s) 258, 453, 973, 1171, 1192
HapII CCGG 3 cut(s) 1135, 1222, 1231
HhaI GCGC 1 cut(s) 1096
Hin1II CATG 6 cut(s) 11, 172, 241, 358, 1052, 1061
Hin6I GCGC 1 cut(s) 1094
HinP1I GCGC 1 cut(s) 1094
HincII GTYRAC 2 cut(s) 547, 1260
HindII GTYRAC 2 cut(s) 547, 1260
HinfI GANTC 7 cut(s) 155, 514, 590, 1002, 1121, 1131, 1286
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 3 cut(s) 1135, 1222, 1231
HphI GGTGA 5 cut(s) 236, 368, 545, 1073, 1217
Hpy166II GTNNAC 5 cut(s) 194, 300, 547, 1055, 1260
Hpy188I TCNGA 8 cut(s) 17, 47, 215, 294, 519, 621, 739, 1126
Hpy188III TCNNGA 9 cut(s) 587, 836, 906, 995, 1029, 1071, 1135, 1146, 1331
Hpy8I GTNNAC 5 cut(s) 194, 300, 547, 1055, 1260
HpyAV CCTTC 5 cut(s) 260, 641, 833, 984, 1026
HpyCH4III ACNGT 3 cut(s) 313, 380, 951
HpyF10VI GCNNNNNNNGC 6 cut(s) 536, 774, 932, 1019, 1227, 1251
HpyF3I CTNAG 3 cut(s) 620, 1006, 1343
Hsp92II CATG 6 cut(s) 11, 172, 241, 358, 1052, 1061
HspAI GCGC 1 cut(s) 1094
Kpn2I TCCGGA 1 cut(s) 1134
KpnI GGTACC 1 cut(s) 660
KroI GCCGGC 1 cut(s) 1230
KroNI GCCGGC 1 cut(s) 1232
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
LmnI GCTCC 4 cut(s) 4, 902, 1202, 1347
Lsp1109I GCAGC 2 cut(s) 1167, 1303
LweI GCATC 3 cut(s) 687, 1081, 1327
MaeI CTAG 5 cut(s) 266, 1029, 1146, 1212, 1320
MaeIII GTNAC 1 cut(s) 380
MalI GATC 7 cut(s) 44, 55, 330, 474, 585, 683, 1081
MboI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
MboII GAAGA 9 cut(s) 139, 167, 281, 319, 365, 467, 706, 794, 820
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 472
MluCI AATT 6 cut(s) 332, 336, 708, 740, 848, 891
MlyI GAGTC 1 cut(s) 164
MroI TCCGGA 1 cut(s) 1134
MroNI GCCGGC 1 cut(s) 1230
MseI TTAA 8 cut(s) 27, 81, 204, 317, 335, 339, 404, 546
MslI CAYNNNNRTG 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 1316
MspI CCGG 3 cut(s) 1135, 1222, 1231
MspR9I CCNGG 3 cut(s) 637, 945, 1278
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 3 cut(s) 637, 945, 1278
MwoI GCNNNNNNNGC 6 cut(s) 536, 774, 932, 1019, 1227, 1251
NaeI GCCGGC 1 cut(s) 1232
NdeII GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
NgoMIV GCCGGC 1 cut(s) 1230
NlaIII CATG 6 cut(s) 11, 172, 241, 358, 1052, 1061
NlaIV GGNNCC 4 cut(s) 120, 658, 824, 898
NmuCI GTSAC 1 cut(s) 380
NspI RCATGY 3 cut(s) 11, 172, 358
OliI CACNNNNGTG 1 cut(s) 558
PacI TTAATTAA 1 cut(s) 339
PceI AGGCCT 2 cut(s) 973, 1171
PdiI GCCGGC 1 cut(s) 1232
PfeI GAWTC 6 cut(s) 514, 590, 1002, 1121, 1131, 1286
PflMI CCANNNNNTGG 1 cut(s) 893
PkrI GCNGC 2 cut(s) 1157, 1318
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PpuMI RGGWCCY 1 cut(s) 823
PshBI ATTAAT 2 cut(s) 81, 335
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 3 cut(s) 635, 943, 1276
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 3 cut(s) 635, 943, 1276
PspN4I GGNNCC 4 cut(s) 120, 658, 824, 898
PspPI GGNCC 3 cut(s) 257, 823, 947
PspPPI RGGWCCY 1 cut(s) 823
PstI CTGCAG 1 cut(s) 958
PsuI RGATCY 1 cut(s) 472
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 7 cut(s) 87, 167, 195, 353, 658, 1309, 1372
RsaNI GTAC 7 cut(s) 86, 166, 194, 352, 657, 1308, 1371
RseI CAYNNNNRTG 1 cut(s) 558
SaqAI TTAA 8 cut(s) 27, 81, 204, 317, 335, 339, 404, 546
SatI GCNGC 2 cut(s) 1156, 1317
Sau3AI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1079
Sau96I GGNCC 3 cut(s) 257, 823, 947
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 3 cut(s) 637, 945, 1278
SfaNI GCATC 3 cut(s) 687, 1081, 1327
SfcI CTRYAG 1 cut(s) 954
SinI GGWCC 2 cut(s) 823, 947
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 1 cut(s) 1240
SmoI CTYRAG 1 cut(s) 1240
Sse9I AATT 6 cut(s) 332, 336, 708, 740, 848, 891
SseBI AGGCCT 2 cut(s) 973, 1171
SsiI CCGC 1 cut(s) 1326
SspMI CTAG 5 cut(s) 266, 1029, 1146, 1212, 1320
StuI AGGCCT 2 cut(s) 973, 1171
StyD4I CCNGG 3 cut(s) 635, 943, 1276
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 3 cut(s) 313, 380, 951
TaqI TCGA 2 cut(s) 835, 994
TasI AATT 6 cut(s) 332, 336, 708, 740, 848, 891
TatI WGTACW 3 cut(s) 85, 165, 351
TfiI GAWTC 6 cut(s) 514, 590, 1002, 1121, 1131, 1286
Tru1I TTAA 8 cut(s) 27, 81, 204, 317, 335, 339, 404, 546
Tru9I TTAA 8 cut(s) 27, 81, 204, 317, 335, 339, 404, 546
TscAI CASTG 3 cut(s) 691, 984, 1252
TseFI GTSAC 1 cut(s) 380
TseI GCWGC 2 cut(s) 1155, 1316
Tsp45I GTSAC 1 cut(s) 380
TspDTI ATGAA 4 cut(s) 789, 820, 1131, 1299
TspRI CASTG 3 cut(s) 691, 984, 1252
Van91I CCANNNNNTGG 1 cut(s) 893
VpaK11BI GGWCC 2 cut(s) 823, 947
VspI ATTAAT 2 cut(s) 81, 335
XagI CCTNNNNNAGG 1 cut(s) 1165
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 2 cut(s) 1028, 1145
XceI RCATGY 3 cut(s) 11, 172, 358
XcmI CCANNNNNNNNNTGG 1 cut(s) 1274
XspI CTAG 5 cut(s) 266, 1029, 1146, 1212, 1320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.