RLG00000009736
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
57128379 .. 57133733
5355 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009736

Sequence Viewer

Length: 1386 bp
ATGGAGCATGTTATTGGAGGCAAGTTTAAGCTGGGGAGAAAGATCGGCAGTGGATCGTTTGGGGAGCTTTATTTGGGGATTAATGTACAAACTGGAGAGGAGGTGGCTGTGAAGCTGGAACCCGTGAAGACAAAACACCCACAGCTTCACTATGAGTCAAAGTTGTACATGCTTCTTCAAGGAGGAACGGGTGTACCCCATCTTAAATGGTTTGGAGTTGAGGGTGAATATAATGTCATGGTTATTGACCTTCTTGGCCCAAGCCTAGAAGACTTGTTCAACTATTGCAATCGGAAGTTCACTTTGAAGACAGTTTTAATGCTTGCAGATCAATTAATAAACCGAGTGGAGTACATGCACTCACGGGGATTTCTTCACCGTGACATAAAGCCTGACAACTTCTTAATGGGTCTGGGGCGTAAAGCTAATCAGGTATATATCATTGATTATGGCCTTGCAAAAAAGTATAGAGATCTTCAAACGCATAAGCACATACCATACAGGGAAAATAAGAATCTGACAGGAACAGCTCGCTATGCAAGTGTTAACACTCACCTTGGTGTTGAGCAAAGCAGGAGAGATGATCTGGAATCTCTTGGTTATGTGCTTATGTATTTTCTGAGGGGAAGCCTTCCCTGGCAGGGCTTGAAAGCAGGTACCAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATTGAGGTTCTGTGTAAATCATATCCATCAGAATTCACATCTTACTTCCATTATTGTCGCTCATTACGCTTTGAAGATAAACCAGATTATTCATACCTGAAGAGACTTTTCAGGGACCTTTTCATTCGAGAAGGTTATCAATTTGACTATGTATTTGATTGGACAATACTGAAGTATCCACAAATTGGCTCCAGTTCCAGAACACGAGCAAGTGCAAAACCAGCTTTGAACCCTGGACCTTCTGCAGAAAGAACAGAAAGGCCTTCAGTGGGACAAGATTTTCGAGATAGATTCTCAGGTGCAGTTGAAGCATTTTCTAGAAGGAATGGTTCTGGGCATGGTTCACATGGTGATAACTCCAGACATAGATCAACTGATGATGCGCCATCATCCAAAGATGCGCAACCTGATTCAGAAAGAATCCGGAGTTCATCTAGAAATGGCAGCACCTCAAAGAGGCCTGTCATATCAAGCAGTAGGCCAAGCTCCTCTGGTGAGCCTAGCGAGAGCCGGTCAAGCCGGCTGGTCTCAAGCAGTGGTCGCCTGTCAACCACCCAAAGGACACCTGGGTATGAATCAAAAGTGTCTTATACTCGTACTTCAGCTGCTAGAGGCGGTCGTGATGATGCACTTAGGAGCTTTGAGCTTCTTTCAATCGGTACGGGGAAGAGGAAATAA

Protein Analysis

462

Amino Acids

52.23

Weight (kDa)

9.74

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 228 7.6e-26 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 270 9.4e-15 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 118 - 206 2e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1110
Acc36I ACCTGC 1 cut(s) 644
Acc65I GGTACC 1 cut(s) 656
AccB1I GGYRCC 1 cut(s) 656
AccB7I CCANNNNNTGG 1 cut(s) 893
AccIII TCCGGA 1 cut(s) 1131
AciI CCGC 1 cut(s) 1323
AclWI GGATC 1 cut(s) 61
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 4 cut(s) 827, 899, 957, 1293
AdeI CACNNNGTG 1 cut(s) 1058
AfaI GTAC 7 cut(s) 87, 167, 195, 353, 658, 1306, 1369
AfiI CCNNNNNNNGG 5 cut(s) 641, 893, 977, 1164, 1266
AgsI TTSAA 9 cut(s) 179, 280, 307, 479, 649, 782, 937, 1016, 1362
AjnI CCWGG 3 cut(s) 635, 940, 1273
AleI CACNNNNGTG 1 cut(s) 558
Alw26I GTCTC 2 cut(s) 805, 1240
AlwI GGATC 1 cut(s) 61
Aor13HI TCCGGA 1 cut(s) 1131
AoxI GGCC 5 cut(s) 256, 451, 968, 1166, 1187
ApeKI GCWGC 2 cut(s) 1152, 1313
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 4 cut(s) 845, 877, 972, 1004
AseI ATTAAT 2 cut(s) 81, 335
Asp718I GGTACC 1 cut(s) 656
AspLEI GCGC 2 cut(s) 1093, 1111
AspS9I GGNCC 3 cut(s) 257, 823, 944
AsuHPI GGTGA 5 cut(s) 236, 368, 545, 1070, 1214
AvaII GGWCC 2 cut(s) 823, 944
BaeI ACNNNNGTAYC 4 cut(s) 177, 210, 866, 899
BanI GGYRCC 1 cut(s) 656
BauI CACGAG 1 cut(s) 912
BbsI GAAGAC 3 cut(s) 134, 276, 314
BbvI GCAGC 2 cut(s) 1164, 1300
BccI CCATC 3 cut(s) 207, 742, 1102
BciT130I CCWGG 3 cut(s) 637, 942, 1275
BciVI GTATCC 1 cut(s) 894
BcoDI GTCTC 2 cut(s) 805, 1240
BfaI CTAG 5 cut(s) 266, 1026, 1143, 1209, 1317
BfmI CTRYAG 1 cut(s) 951
BfuAI ACCTGC 1 cut(s) 644
BfuI GTATCC 1 cut(s) 894
BglII AGATCT 1 cut(s) 472
BisI GCNGC 2 cut(s) 1153, 1314
BlsI GCNGC 2 cut(s) 1154, 1315
Bme1390I CCNGG 3 cut(s) 637, 942, 1275
Bme18I GGWCC 2 cut(s) 823, 944
BmgT120I GGNCC 3 cut(s) 257, 823, 944
BmiI GGNNCC 4 cut(s) 120, 658, 824, 898
BmrFI CCNGG 3 cut(s) 637, 942, 1275
BmsI GCATC 4 cut(s) 687, 1078, 1096, 1324
BpiI GAAGAC 3 cut(s) 134, 276, 314
BpmI CTGGAG 3 cut(s) 114, 883, 1051
BpuEI CTTGAG 1 cut(s) 1222
BsaI GGTCTC 1 cut(s) 1240
BsaJI CCNNGG 4 cut(s) 556, 635, 940, 1274
BsaWI WCCGGW 1 cut(s) 1131
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 5 cut(s) 641, 893, 977, 1164, 1266
Bse118I RCCGGY 2 cut(s) 1218, 1227
Bse1I ACTGG 2 cut(s) 97, 900
BseAI TCCGGA 1 cut(s) 1131
BseBI CCWGG 3 cut(s) 637, 942, 1275
BseDI CCNNGG 4 cut(s) 556, 635, 940, 1274
BseGI GGATG 1 cut(s) 1097
BseLI CCNNNNNNNGG 5 cut(s) 641, 893, 977, 1164, 1266
BseMII CTCAG 2 cut(s) 611, 1017
BseNI ACTGG 2 cut(s) 97, 900
BseRI GAGGAG 2 cut(s) 113, 1186
BseXI GCAGC 2 cut(s) 1164, 1300
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 1029
Bsh1285I CGRYCG 1 cut(s) 1327
BshFI GGCC 5 cut(s) 258, 453, 970, 1168, 1189
BshNI GGYRCC 1 cut(s) 656
BsiEI CGRYCG 1 cut(s) 1327
BsiSI CCGG 3 cut(s) 1132, 1219, 1228
BslFI GGGAC 2 cut(s) 836, 993
BslI CCNNNNNNNGG 5 cut(s) 641, 893, 977, 1164, 1266
BsmAI GTCTC 2 cut(s) 805, 1240
BsmFI GGGAC 2 cut(s) 836, 993
BsnI GGCC 5 cut(s) 258, 453, 970, 1168, 1189
Bso31I GGTCTC 1 cut(s) 1240
Bsp13I TCCGGA 1 cut(s) 1131
Bsp1407I TGTACA 2 cut(s) 85, 165
Bsp143I GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
BspACI CCGC 1 cut(s) 1323
BspANI GGCC 5 cut(s) 258, 453, 970, 1168, 1189
BspCNI CTCAG 2 cut(s) 612, 1016
BspEI TCCGGA 1 cut(s) 1131
BspLI GGNNCC 4 cut(s) 120, 658, 824, 898
BspMAI CTGCAG 1 cut(s) 955
BspMI ACCTGC 1 cut(s) 644
BspPI GGATC 1 cut(s) 61
BspT107I GGYRCC 1 cut(s) 656
BspTNI GGTCTC 1 cut(s) 1240
BsrFI RCCGGY 2 cut(s) 1218, 1227
BsrGI TGTACA 2 cut(s) 85, 165
BsrI ACTGG 2 cut(s) 97, 900
BssAI RCCGGY 2 cut(s) 1218, 1227
BssECI CCNNGG 4 cut(s) 556, 635, 940, 1274
BssMI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
BssSI CACGAG 1 cut(s) 912
BssT1I CCWWGG 1 cut(s) 556
Bst2BI CACGAG 1 cut(s) 912
Bst2UI CCWGG 3 cut(s) 637, 942, 1275
Bst4CI ACNGT 2 cut(s) 313, 380
Bst6I CTCTTC 2 cut(s) 803, 1370
BstAUI TGTACA 2 cut(s) 85, 165
BstC8I GCNNGC 3 cut(s) 324, 532, 1229
BstDEI CTNAG 3 cut(s) 620, 1003, 1340
BstENI CCTNNNNNAGG 1 cut(s) 1162
BstF5I GGATG 1 cut(s) 1097
BstHHI GCGC 2 cut(s) 1093, 1111
BstKTI GATC 7 cut(s) 45, 56, 331, 475, 586, 684, 1079
BstMAI GTCTC 2 cut(s) 805, 1240
BstMBI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
BstMCI CGRYCG 1 cut(s) 1327
BstMWI GCNNNNNNNGC 6 cut(s) 536, 774, 929, 1016, 1224, 1248
BstNI CCWGG 3 cut(s) 637, 942, 1275
BstNSI RCATGY 3 cut(s) 11, 172, 358
BstSCI CCNGG 3 cut(s) 635, 940, 1273
BstSFI CTRYAG 1 cut(s) 951
BstV1I GCAGC 2 cut(s) 1164, 1300
BstV2I GAAGAC 3 cut(s) 134, 276, 314
BstX2I RGATCY 1 cut(s) 472
BstYI RGATCY 1 cut(s) 472
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 5 cut(s) 258, 453, 970, 1168, 1189
BtsCI GGATG 1 cut(s) 1097
BtsI GCAGTG 2 cut(s) 55, 1249
BtsIMutI CAGTG 4 cut(s) 55, 691, 981, 1249
BveI ACCTGC 1 cut(s) 644
Cac8I GCNNGC 3 cut(s) 324, 532, 1229
CfoI GCGC 2 cut(s) 1093, 1111
Cfr10I RCCGGY 2 cut(s) 1218, 1227
Cfr13I GGNCC 3 cut(s) 257, 823, 944
Csp6I GTAC 7 cut(s) 86, 166, 194, 352, 657, 1305, 1368
CviAII CATG 6 cut(s) 8, 169, 238, 355, 1046, 1055
CviQI GTAC 7 cut(s) 86, 166, 194, 352, 657, 1305, 1368
DdeI CTNAG 3 cut(s) 620, 1003, 1340
DpnI GATC 7 cut(s) 44, 55, 330, 474, 585, 683, 1078
DpnII GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
DraIII CACNNNGTG 1 cut(s) 1058
Eam1104I CTCTTC 2 cut(s) 803, 1370
EarI CTCTTC 2 cut(s) 803, 1370
Eco130I CCWWGG 1 cut(s) 556
Eco147I AGGCCT 2 cut(s) 970, 1168
Eco31I GGTCTC 1 cut(s) 1240
Eco47I GGWCC 2 cut(s) 823, 944
Eco57I CTGAAG 4 cut(s) 827, 899, 957, 1293
EcoNI CCTNNNNNAGG 1 cut(s) 1162
EcoO109I RGGNCCY 1 cut(s) 823
EcoRI GAATTC 1 cut(s) 740
EcoRII CCWGG 3 cut(s) 635, 940, 1273
EcoT14I CCWWGG 1 cut(s) 556
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 6 cut(s) 11, 172, 241, 358, 1049, 1058
FaqI GGGAC 2 cut(s) 836, 993
FatI CATG 6 cut(s) 7, 168, 237, 354, 1045, 1054
Fnu4HI GCNGC 2 cut(s) 1153, 1314
FokI GGATG 1 cut(s) 1084
Fsp4HI GCNGC 2 cut(s) 1153, 1314
FspBI CTAG 5 cut(s) 266, 1026, 1143, 1209, 1317
FspI TGCGCA 1 cut(s) 1110
GlaI GCGC 2 cut(s) 1092, 1110
GluI GCNGC 2 cut(s) 1153, 1314
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 3 cut(s) 114, 883, 1051
HaeIII GGCC 5 cut(s) 258, 453, 970, 1168, 1189
HapII CCGG 3 cut(s) 1132, 1219, 1228
HhaI GCGC 2 cut(s) 1093, 1111
Hin1II CATG 6 cut(s) 11, 172, 241, 358, 1049, 1058
Hin6I GCGC 2 cut(s) 1091, 1109
HinP1I GCGC 2 cut(s) 1091, 1109
HincII GTYRAC 2 cut(s) 547, 1257
HindII GTYRAC 2 cut(s) 547, 1257
HinfI GANTC 7 cut(s) 155, 514, 590, 999, 1118, 1128, 1283
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 3 cut(s) 1132, 1219, 1228
HphI GGTGA 5 cut(s) 236, 368, 545, 1070, 1214
Hpy166II GTNNAC 5 cut(s) 194, 300, 547, 1052, 1257
Hpy188I TCNGA 5 cut(s) 294, 519, 621, 739, 1123
Hpy188III TCNNGA 9 cut(s) 587, 836, 906, 992, 1026, 1068, 1132, 1143, 1328
Hpy8I GTNNAC 5 cut(s) 194, 300, 547, 1052, 1257
HpyAV CCTTC 6 cut(s) 260, 641, 833, 957, 981, 1023
HpyCH4III ACNGT 2 cut(s) 313, 380
HpyCH4V TGCA 9 cut(s) 288, 326, 358, 458, 539, 923, 953, 1010, 1337
HpyF10VI GCNNNNNNNGC 6 cut(s) 536, 774, 929, 1016, 1224, 1248
HpyF3I CTNAG 3 cut(s) 620, 1003, 1340
Hsp92II CATG 6 cut(s) 11, 172, 241, 358, 1049, 1058
HspAI GCGC 2 cut(s) 1091, 1109
Kpn2I TCCGGA 1 cut(s) 1131
KpnI GGTACC 1 cut(s) 660
KroI GCCGGC 1 cut(s) 1227
KroNI GCCGGC 1 cut(s) 1229
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
LmnI GCTCC 5 cut(s) 4, 64, 902, 1199, 1344
Lsp1109I GCAGC 2 cut(s) 1164, 1300
LweI GCATC 4 cut(s) 687, 1078, 1096, 1324
MaeI CTAG 5 cut(s) 266, 1026, 1143, 1209, 1317
MaeIII GTNAC 1 cut(s) 380
MalI GATC 7 cut(s) 44, 55, 330, 474, 585, 683, 1078
MboI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
MboII GAAGA 9 cut(s) 139, 167, 281, 319, 365, 467, 706, 794, 820
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 472
MluCI AATT 5 cut(s) 332, 708, 740, 848, 891
MlyI GAGTC 1 cut(s) 164
MroI TCCGGA 1 cut(s) 1131
MroNI GCCGGC 1 cut(s) 1227
MseI TTAA 7 cut(s) 27, 81, 204, 317, 335, 404, 546
MslI CAYNNNNRTG 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 1313
MspI CCGG 3 cut(s) 1132, 1219, 1228
MspR9I CCNGG 3 cut(s) 637, 942, 1275
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 3 cut(s) 637, 942, 1275
MwoI GCNNNNNNNGC 6 cut(s) 536, 774, 929, 1016, 1224, 1248
NaeI GCCGGC 1 cut(s) 1229
NdeII GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
NgoMIV GCCGGC 1 cut(s) 1227
NlaIII CATG 6 cut(s) 11, 172, 241, 358, 1049, 1058
NlaIV GGNNCC 4 cut(s) 120, 658, 824, 898
NmuCI GTSAC 1 cut(s) 380
NsbI TGCGCA 1 cut(s) 1110
NspI RCATGY 3 cut(s) 11, 172, 358
OliI CACNNNNGTG 1 cut(s) 558
PceI AGGCCT 2 cut(s) 970, 1168
PdiI GCCGGC 1 cut(s) 1229
PfeI GAWTC 6 cut(s) 514, 590, 999, 1118, 1128, 1283
PflMI CCANNNNNTGG 1 cut(s) 893
PkrI GCNGC 2 cut(s) 1154, 1315
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PpuMI RGGWCCY 1 cut(s) 823
PshBI ATTAAT 2 cut(s) 81, 335
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 3 cut(s) 635, 940, 1273
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 3 cut(s) 635, 940, 1273
PspN4I GGNNCC 4 cut(s) 120, 658, 824, 898
PspPI GGNCC 3 cut(s) 257, 823, 944
PspPPI RGGWCCY 1 cut(s) 823
PstI CTGCAG 1 cut(s) 955
PsuI RGATCY 1 cut(s) 472
PvuII CAGCTG 1 cut(s) 1313
RsaI GTAC 7 cut(s) 87, 167, 195, 353, 658, 1306, 1369
RsaNI GTAC 7 cut(s) 86, 166, 194, 352, 657, 1305, 1368
RseI CAYNNNNRTG 1 cut(s) 558
SaqAI TTAA 7 cut(s) 27, 81, 204, 317, 335, 404, 546
SatI GCNGC 2 cut(s) 1153, 1314
Sau3AI GATC 7 cut(s) 42, 53, 328, 472, 583, 681, 1076
Sau96I GGNCC 3 cut(s) 257, 823, 944
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 3 cut(s) 637, 942, 1275
SfaNI GCATC 4 cut(s) 687, 1078, 1096, 1324
SfcI CTRYAG 1 cut(s) 951
SinI GGWCC 2 cut(s) 823, 944
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 1 cut(s) 1237
SmoI CTYRAG 1 cut(s) 1237
Sse9I AATT 5 cut(s) 332, 708, 740, 848, 891
SseBI AGGCCT 2 cut(s) 970, 1168
SsiI CCGC 1 cut(s) 1323
SspMI CTAG 5 cut(s) 266, 1026, 1143, 1209, 1317
StuI AGGCCT 2 cut(s) 970, 1168
StyD4I CCNGG 3 cut(s) 635, 940, 1273
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 2 cut(s) 313, 380
TaqI TCGA 2 cut(s) 835, 991
TasI AATT 5 cut(s) 332, 708, 740, 848, 891
TatI WGTACW 3 cut(s) 85, 165, 351
TfiI GAWTC 6 cut(s) 514, 590, 999, 1118, 1128, 1283
Tru1I TTAA 7 cut(s) 27, 81, 204, 317, 335, 404, 546
Tru9I TTAA 7 cut(s) 27, 81, 204, 317, 335, 404, 546
TscAI CASTG 4 cut(s) 55, 691, 981, 1249
TseFI GTSAC 1 cut(s) 380
TseI GCWGC 2 cut(s) 1152, 1313
Tsp45I GTSAC 1 cut(s) 380
TspDTI ATGAA 4 cut(s) 789, 820, 1128, 1296
TspRI CASTG 4 cut(s) 55, 691, 981, 1249
Van91I CCANNNNNTGG 1 cut(s) 893
VpaK11BI GGWCC 2 cut(s) 823, 944
VspI ATTAAT 2 cut(s) 81, 335
XagI CCTNNNNNAGG 1 cut(s) 1162
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 2 cut(s) 1025, 1142
XceI RCATGY 3 cut(s) 11, 172, 358
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XspI CTAG 5 cut(s) 266, 1026, 1143, 1209, 1317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.