Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004623

Physical Location & Seq

Genomic Coordinates Reverse (-)

16336502 .. 16341230

Gene Structure 4729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g20310.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTACCGCTTTGCTTCAAGCCTGGCTTCCAAAGCTCGGGTTGCCAGGAACTGTACCAAGCAGATTGGTGGTAGGCTGAGTTGGAGCAGAAACTATGCAGCCAAAGACATTAAATTCGGAGTGGAGGCCCGAGCCCTCATGCTCAGTGGTGTCGAAGAGCTTGCGGATGCTGTCAAAGTCACCATGGGACCTAAGGGGCGTAATGTGGTTATTGAACAAAGCTTTGGGGCACCCAAAGTGACAAAAGATGGTGTAACAGTTGCAAAAAGTATAGAGTTCAAGGATAAAGTCAAGAATGTTGGTGCTAGCCTAGTGAAACAGGTTGCTAATGCTACTAATGATGTAGCGGGTGATGGTACAACTTGTGCTACAATCTTGACCAAGGCTATTTATACTGAAGGATGCAAGTCAGTTGCTGCCGGGATGAACGCAATGGACCTGCGACGTGGTATTACTTCGGCAGTTGATTCTGTGGTAACAAACTTGAAGAGCAGAGCACGAATGATCAGCACTTCTGAAGAGATAGCACAGGTTGGAACAATATCAGCGAATGGAGAGAGAGAAATTGGTGAGTTGATTGCAAAGGCCATGGAGAAGGTTGGAAAAGAGGGAGTAATCACAATCTCTGATGGGAAAACATTGTACAATGAGTTGGAAGTTGTCGAGGGGATGAAGCTAGACAGAGGCTACATATCCCCTTATTTCATCACCAACCAGAAAAATCAGAAATGCGTAAATCCTCTAATTCTAATCCATGAGAAGAAAATCTCAAATATTAATGCCGTGGTCAAAGTATTGGAGTTGGCTTTGAAGAAGCAAAGGCCTTTGCTGATTGTCGCAGAAGATGTAGAGAGCGATGCGCTGGCAACTCTTATTCTAAATAAGCTTCGTGCTGGTATCAAGGTCTGTGCAATCAAAGCCCCTGGTTTTGGTGAAAATAGGAAAGCCGGTCTCCAGGATCTTGCCGTTCTCACTGGGGGTTCTGTTATTACTGAAGAGCTTGGTCTGAATCTTGACAAAGTGGAATTGGATATGCTCGGAAGTTGCAAAAAGGTCACAGTTTCAAAAGATGACACTGTAATTCTTGATGGTGCTGGTGACAAGAAGGCCATTGACGAAAGATCTGAACAGATTAGGTCGGCAATTGAATTAAGCACTTCCGACTATGACAAGGAAAAGTTACAGGAGAGACTCGCAAAGCTTTCTGGTGGTGTTGCCGTTTTGAAGATTGGAGGAGCTAGTGAAGCAGAAGTTAGTGAGAAGAAGGATAGGGTTACCGATGCCTTAAATGCCACTAAGGCTGCCGTTGAAGAGGGTATAGTACCAGGTGGTGGTGTTGCTCTTCTTTATGCATCTAAAGAGTTGGAAAAGCTCCAAACTGTTAATTTTGATCAGAAGGTTGGAATTCAAATTATTCAGAATGCTCTAAAGGCACCTGTTCATACAATTGCTTCTAACGCGGGAGTTGAGGGAGCTGTTGTTGTTGGTAAGCTATTGGAGCAAGATAACGCTGATCTTGGCTATGATGCAGCCAAAGGTGAATATGTTGATATGATTAAAGCTGGAATAATTGATCCATTGAAAGTAATTAGAACTGCTTTAGTGGATGCTGCAAGTGTGTCGTCTTTGCTCACGACTACTGAAGCTGTTGTAGTTGAGCTTCCCAGTGAAAAGGAGACCCCGGCAATGGGTGGCGGTATGGGTGGTGGCATGGGTGGAATGGATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005507 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006457 GO:0006458 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006950 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0017076 GO:0022626 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042788 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046686 GO:0046872 GO:0046907 GO:0046914 GO:0050896 GO:0051082 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061077 GO:0065002 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0071944 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

577

Amino Acids

60.91

Weight (kDa)

6.83

Isoelectric Point (pI)

27.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004623)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33210 AT2G33210 AT3G23990
fragaria_vesca	FvH4_2g19800 FvH4_4g05420
malus_domestica	MD05G1182500.v1.1 MD10G1170700.v1.1
prunus_persica	Prupe.1G056300_v2.0.a1 Prupe.8G209200_v2.0.a1 Prupe.8G209200_v2.0.a1
pyrus_communis	pycom13g20310
rosa_chinensis	RchiOBHm_Chr4g0396571 RchiOBHm_Chr6g0285501
rosa_laevigata	RLG00000009520 RLG00000012634
rosa_multiflora	Rmu_sc0001781.1_g000002 Rmu_sc0012495.1_g000008
rosa_roxburghii	Rroxscaffold_5G00341420 Rroxscaffold_7G00183070
rosa_rugosa	Rorug03G0349000 Rorug06G0175000
rosa_samantha	Rh4AG070400 Rh4BG068300 Rh4CG076200 Rh4DG065400 Rh6AG286600 Rh6BG287800 Rh6CG289000 Rh6DG281800
rosa_wichuraiana	Rw4G005610 Rw6G024620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	447
AccB1I	GGYRCC	2 cut(s)	229, 1432
AccB7I	CCANNNNNTGG	1 cut(s)	1331
AccII	CGCG	1 cut(s)	1460
AciI	CCGC	5 cut(s)	7, 164, 347, 1460, 1695
AclWI	GGATC	2 cut(s)	966, 1568
AcsI	RAATTY	2 cut(s)	113, 1404
AcuI	CTGAAG	4 cut(s)	417, 537, 1014, 1662
AfaI	GTAC	5 cut(s)	5, 55, 358, 644, 1323
AfiI	CCNNNNNNNGG	5 cut(s)	36, 929, 1331, 1687, 1688
AjiI	CACGTC	1 cut(s)	446
AjnI	CCWGG	5 cut(s)	21, 44, 922, 954, 1324
AjuI	GAANNNNNNNTTGG	2 cut(s)	207, 239
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	3 cut(s)	956, 1183, 1670
AlwI	GGATC	2 cut(s)	966, 1568
AlwNI	CAGNNNCTG	2 cut(s)	51, 416
Ama87I	CYCGRG	2 cut(s)	36, 129
AoxI	GGCC	4 cut(s)	126, 585, 821, 1107
ApeKI	GCWGC	5 cut(s)	98, 416, 1301, 1529, 1610
ApoI	RAATTY	2 cut(s)	113, 1404
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
AseI	ATTAAT	1 cut(s)	777
AspLEI	GCGC	1 cut(s)	862
AspS9I	GGNCC	3 cut(s)	127, 188, 436
AsuC2I	CCSGG	2 cut(s)	421, 1682
AsuHPI	GGTGA	7 cut(s)	172, 362, 581, 700, 944, 1109, 1550
AsuNHI	GCTAGC	1 cut(s)	305
AvaI	CYCGRG	2 cut(s)	36, 129
AvaII	GGWCC	2 cut(s)	188, 436
AxyI	CCTNAGG	1 cut(s)	192
BaeGI	GKGCMC	1 cut(s)	232
BanI	GGYRCC	2 cut(s)	229, 1432
BanII	GRGCYC	1 cut(s)	136
BarI	GAAGNNNNNNTAC	2 cut(s)	1644, 1676
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	5 cut(s)	110, 403, 1288, 1541, 1597
BccI	CCATC	4 cut(s)	242, 347, 623, 1082
BceAI	ACGGC	4 cut(s)	767, 950, 1202, 1289
BcgI	CGANNNNNNTGC	4 cut(s)	143, 177, 1602, 1636
BciT130I	CCWGG	5 cut(s)	23, 46, 924, 956, 1326
BclI	TGATCA	2 cut(s)	504, 1390
BcnI	CCSGG	2 cut(s)	421, 1682
BcoDI	GTCTC	3 cut(s)	956, 1183, 1670
BfaI	CTAG	4 cut(s)	306, 311, 677, 1239
BfuAI	ACCTGC	1 cut(s)	447
BglI	GCCNNNNNGGC	1 cut(s)	1298
BglII	AGATCT	1 cut(s)	1121
BisI	GCNGC	5 cut(s)	99, 417, 1302, 1530, 1611
BlsI	GCNGC	5 cut(s)	100, 418, 1303, 1531, 1612
Bme1390I	CCNGG	7 cut(s)	23, 46, 421, 924, 956, 1326, 1682
Bme18I	GGWCC	2 cut(s)	188, 436
BmeT110I	CYCGRG	2 cut(s)	36, 129
BmgBI	CACGTC	1 cut(s)	446
BmgT120I	GGNCC	3 cut(s)	127, 188, 436
BmiI	GGNNCC	3 cut(s)	189, 231, 1434
BmrFI	CCNGG	7 cut(s)	23, 46, 421, 924, 956, 1326, 1682
BmrI	ACTGGG	2 cut(s)	984, 1659
BmsI	GCATC	7 cut(s)	157, 392, 847, 1270, 1361, 1516, 1597
BmtI	GCTAGC	1 cut(s)	309
BmuI	ACTGGG	2 cut(s)	984, 1659
BpmI	CTGGAG	1 cut(s)	938
BpuMI	CCSGG	2 cut(s)	421, 1682
BsaI	GGTCTC	2 cut(s)	956, 1670
BsaJI	CCNNGG	6 cut(s)	183, 381, 588, 783, 922, 1680
BsaXI	ACNNNNNCTCC	2 cut(s)	1464, 1494
Bsc4I	CCNNNNNNNGG	5 cut(s)	36, 929, 1331, 1687, 1688
Bse118I	RCCGGY	1 cut(s)	947
Bse1I	ACTGG	2 cut(s)	979, 1665
Bse21I	CCTNAGG	1 cut(s)	192
Bse3DI	GCAATG	2 cut(s)	438, 1692
BseBI	CCWGG	5 cut(s)	23, 46, 924, 956, 1326
BseDI	CCNNGG	6 cut(s)	183, 381, 588, 783, 922, 1680
BseGI	GGATG	5 cut(s)	172, 407, 429, 675, 1612
BseLI	CCNNNNNNNGG	5 cut(s)	36, 929, 1331, 1687, 1688
BseMI	GCAATG	2 cut(s)	438, 1692
BseMII	CTCAG	2 cut(s)	68, 157
BseNI	ACTGG	2 cut(s)	979, 1665
BseRI	GAGGAG	1 cut(s)	1248
BseSI	GKGCMC	1 cut(s)	232
BseXI	GCAGC	5 cut(s)	110, 403, 1288, 1541, 1597
Bsh1236I	CGCG	1 cut(s)	1460
BshFI	GGCC	4 cut(s)	128, 587, 823, 1109
BshNI	GGYRCC	2 cut(s)	229, 1432
BsiHKAI	GWGCWC	1 cut(s)	499
BsiHKCI	CYCGRG	2 cut(s)	36, 129
BsiSI	CCGG	3 cut(s)	420, 948, 1682
BslFI	GGGAC	1 cut(s)	201
BslI	CCNNNNNNNGG	5 cut(s)	36, 929, 1331, 1687, 1688
BsmAI	GTCTC	3 cut(s)	956, 1183, 1670
BsmFI	GGGAC	1 cut(s)	201
BsmI	GAATGC	1 cut(s)	1426
BsnI	GGCC	4 cut(s)	128, 587, 823, 1109
Bso31I	GGTCTC	2 cut(s)	956, 1670
BsoBI	CYCGRG	2 cut(s)	36, 129
Bsp1286I	GDGCHC	3 cut(s)	136, 232, 499
Bsp1407I	TGTACA	1 cut(s)	642
Bsp143I	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
Bsp19I	CCATGG	2 cut(s)	183, 588
BspACI	CCGC	5 cut(s)	7, 164, 347, 1460, 1695
BspANI	GGCC	4 cut(s)	128, 587, 823, 1109
BspCNI	CTCAG	2 cut(s)	69, 156
BspFNI	CGCG	1 cut(s)	1460
BspLI	GGNNCC	3 cut(s)	189, 231, 1434
BspMI	ACCTGC	1 cut(s)	447
BspOI	GCTAGC	1 cut(s)	309
BspPI	GGATC	2 cut(s)	966, 1568
BspQI	GCTCTTC	4 cut(s)	150, 482, 990, 1347
BspT107I	GGYRCC	2 cut(s)	229, 1432
BspTNI	GGTCTC	2 cut(s)	956, 1670
BsrDI	GCAATG	2 cut(s)	438, 1692
BsrFI	RCCGGY	1 cut(s)	947
BsrGI	TGTACA	1 cut(s)	642
BsrI	ACTGG	2 cut(s)	979, 1665
BssAI	RCCGGY	1 cut(s)	947
BssECI	CCNNGG	6 cut(s)	183, 381, 588, 783, 922, 1680
BssMI	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
BssT1I	CCWWGG	3 cut(s)	183, 381, 588
Bst2UI	CCWGG	5 cut(s)	23, 46, 924, 956, 1326
Bst4CI	ACNGT	5 cut(s)	53, 259, 1060, 1078, 1381
Bst6I	CTCTTC	6 cut(s)	150, 482, 513, 990, 1305, 1347
BstAUI	TGTACA	1 cut(s)	642
BstC8I	GCNNGC	3 cut(s)	162, 307, 864
BstDEI	CTNAG	4 cut(s)	77, 143, 192, 1296
BstDSI	CCRYGG	3 cut(s)	183, 588, 783
BstEII	GGTNACC	1 cut(s)	1273
BstF5I	GGATG	5 cut(s)	172, 407, 429, 675, 1612
BstFNI	CGCG	1 cut(s)	1460
BstHHI	GCGC	1 cut(s)	862
BstKTI	GATC	6 cut(s)	507, 961, 1124, 1393, 1516, 1576
BstMAI	GTCTC	3 cut(s)	956, 1183, 1670
BstMBI	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 41, 917, 1244, 1289, 1298, 1430, 1457, 1498
BstNI	CCWGG	5 cut(s)	23, 46, 924, 956, 1326
BstPI	GGTNACC	1 cut(s)	1273
BstSCI	CCNGG	7 cut(s)	21, 44, 419, 922, 954, 1324, 1680
BstSLI	GKGCMC	1 cut(s)	232
BstUI	CGCG	1 cut(s)	1460
BstV1I	GCAGC	5 cut(s)	110, 403, 1288, 1541, 1597
BstX2I	RGATCY	2 cut(s)	958, 1121
BstYI	RGATCY	2 cut(s)	958, 1121
Bsu36I	CCTNAGG	1 cut(s)	192
BsuRI	GGCC	4 cut(s)	128, 587, 823, 1109
BtgI	CCRYGG	3 cut(s)	183, 588, 783
BtgZI	GCGATG	1 cut(s)	870
BtrI	CACGTC	1 cut(s)	446
BtsCI	GGATG	5 cut(s)	172, 407, 429, 675, 1612
BtsIMutI	CAGTG	4 cut(s)	151, 972, 1074, 1672
BveI	ACCTGC	1 cut(s)	447
Cac8I	GCNNGC	3 cut(s)	162, 307, 864
CaiI	CAGNNNCTG	2 cut(s)	51, 416
CfoI	GCGC	1 cut(s)	862
Cfr10I	RCCGGY	1 cut(s)	947
Cfr13I	GGNCC	3 cut(s)	127, 188, 436
CsiI	ACCWGGT	1 cut(s)	1324
Csp6I	GTAC	5 cut(s)	4, 54, 357, 643, 1322
CviAII	CATG	5 cut(s)	139, 184, 589, 755, 1711
CviQI	GTAC	5 cut(s)	4, 54, 357, 643, 1322
DdeI	CTNAG	4 cut(s)	77, 143, 192, 1296
DpnI	GATC	6 cut(s)	506, 960, 1123, 1392, 1515, 1575
DpnII	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
Eam1104I	CTCTTC	6 cut(s)	150, 482, 513, 990, 1305, 1347
EarI	CTCTTC	6 cut(s)	150, 482, 513, 990, 1305, 1347
Eco130I	CCWWGG	3 cut(s)	183, 381, 588
Eco147I	AGGCCT	1 cut(s)	823
Eco24I	GRGCYC	1 cut(s)	136
Eco31I	GGTCTC	2 cut(s)	956, 1670
Eco47I	GGWCC	2 cut(s)	188, 436
Eco57I	CTGAAG	4 cut(s)	417, 537, 1014, 1662
Eco81I	CCTNAGG	1 cut(s)	192
Eco88I	CYCGRG	2 cut(s)	36, 129
Eco91I	GGTNACC	1 cut(s)	1273
EcoO109I	RGGNCCY	1 cut(s)	188
EcoO65I	GGTNACC	1 cut(s)	1273
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	5 cut(s)	21, 44, 922, 954, 1324
EcoT14I	CCWWGG	3 cut(s)	183, 381, 588
EcoT22I	ATGCAT	1 cut(s)	1354
EcoT38I	GRGCYC	1 cut(s)	136
ErhI	CCWWGG	3 cut(s)	183, 381, 588
FaeI	CATG	5 cut(s)	142, 187, 592, 758, 1714
FalI	AAGNNNNNCTT	2 cut(s)	10, 42
FaqI	GGGAC	1 cut(s)	201
FatI	CATG	5 cut(s)	138, 183, 588, 754, 1710
FauI	CCCGC	2 cut(s)	340, 1453
FbaI	TGATCA	2 cut(s)	504, 1390
Fnu4HI	GCNGC	5 cut(s)	99, 417, 1302, 1530, 1611
FokI	GGATG	5 cut(s)	179, 414, 436, 682, 1619
FriOI	GRGCYC	1 cut(s)	136
Fsp4HI	GCNGC	5 cut(s)	99, 417, 1302, 1530, 1611
FspBI	CTAG	4 cut(s)	306, 311, 677, 1239
GlaI	GCGC	1 cut(s)	861
GluI	GCNGC	5 cut(s)	99, 417, 1302, 1530, 1611
GsuI	CTGGAG	1 cut(s)	938
HaeIII	GGCC	4 cut(s)	128, 587, 823, 1109
HapII	CCGG	3 cut(s)	420, 948, 1682
HhaI	GCGC	1 cut(s)	862
Hin1II	CATG	5 cut(s)	142, 187, 592, 758, 1714
Hin6I	GCGC	1 cut(s)	860
HinP1I	GCGC	1 cut(s)	860
HindIII	AAGCTT	3 cut(s)	220, 884, 1199
HinfI	GANTC	3 cut(s)	467, 1009, 1191
HpaII	CCGG	3 cut(s)	420, 948, 1682
HphI	GGTGA	7 cut(s)	172, 362, 581, 700, 944, 1109, 1550
Hpy188III	TCNNGA	5 cut(s)	292, 376, 1013, 1085, 1633
Hpy99I	CGWCG	1 cut(s)	447
HpyAV	CCTTC	5 cut(s)	392, 589, 1099, 1258, 1390
HpyCH4III	ACNGT	5 cut(s)	53, 259, 1060, 1078, 1381
HpyCH4IV	ACGT	1 cut(s)	445
HpyCH4V	TGCA	9 cut(s)	98, 263, 405, 581, 911, 1047, 1352, 1529, 1613
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 41, 917, 1244, 1289, 1298, 1430, 1457, 1498
HpyF3I	CTNAG	4 cut(s)	77, 143, 192, 1296
HpySE526I	ACGT	1 cut(s)	445
Hsp92II	CATG	5 cut(s)	142, 187, 592, 758, 1714
HspAI	GCGC	1 cut(s)	860
Ksp22I	TGATCA	2 cut(s)	504, 1390
Kzo9I	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
LguI	GCTCTTC	4 cut(s)	150, 482, 990, 1347
LmnI	GCTCC	5 cut(s)	84, 1235, 1377, 1472, 1498
Lsp1109I	GCAGC	5 cut(s)	110, 403, 1288, 1541, 1597
LweI	GCATC	7 cut(s)	157, 392, 847, 1270, 1361, 1516, 1597
MabI	ACCWGGT	1 cut(s)	1324
MaeI	CTAG	4 cut(s)	306, 311, 677, 1239
MaeII	ACGT	1 cut(s)	445
MaeIII	GTNAC	8 cut(s)	178, 238, 253, 475, 1054, 1097, 1179, 1273
MalI	GATC	6 cut(s)	506, 960, 1123, 1392, 1515, 1575
MboI	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
MfeI	CAATTG	2 cut(s)	1143, 1446
MflI	RGATCY	2 cut(s)	958, 1121
MhlI	GDGCHC	3 cut(s)	136, 232, 499
MlyI	GAGTC	1 cut(s)	1185
MmeI	TCCRAC	7 cut(s)	62, 514, 580, 633, 1185, 1344, 1381
MnlI	CCTC	9 cut(s)	118, 146, 601, 658, 677, 750, 1226, 1306, 1462
Mph1103I	ATGCAT	1 cut(s)	1354
MseI	TTAA	6 cut(s)	111, 777, 1151, 1286, 1383, 1557
MspI	CCGG	3 cut(s)	420, 948, 1682
MspR9I	CCNGG	7 cut(s)	23, 46, 421, 924, 956, 1326, 1682
MunI	CAATTG	2 cut(s)	1143, 1446
Mva1269I	GAATGC	1 cut(s)	1426
MvaI	CCWGG	5 cut(s)	23, 46, 924, 956, 1326
MvnI	CGCG	1 cut(s)	1460
MwoI	GCNNNNNNNGC	9 cut(s)	32, 41, 917, 1244, 1289, 1298, 1430, 1457, 1498
NciI	CCSGG	2 cut(s)	421, 1682
NcoI	CCATGG	2 cut(s)	183, 588
NdeII	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
NheI	GCTAGC	1 cut(s)	305
NlaIII	CATG	5 cut(s)	142, 187, 592, 758, 1714
NlaIV	GGNNCC	3 cut(s)	189, 231, 1434
NmuCI	GTSAC	4 cut(s)	178, 238, 1054, 1097
NsiI	ATGCAT	1 cut(s)	1354
PceI	AGGCCT	1 cut(s)	823
PciSI	GCTCTTC	4 cut(s)	150, 482, 990, 1347
PctI	GAATGC	1 cut(s)	1426
PfeI	GAWTC	2 cut(s)	467, 1009
PflMI	CCANNNNNTGG	1 cut(s)	1331
PfoI	TCCNGGA	1 cut(s)	954
PkrI	GCNGC	5 cut(s)	100, 418, 1303, 1531, 1612
PleI	GAGTC	1 cut(s)	1185
PpsI	GAGTC	1 cut(s)	1185
PpuMI	RGGWCCY	1 cut(s)	188
PshBI	ATTAAT	1 cut(s)	777
Psp5II	RGGWCCY	1 cut(s)	188
Psp6I	CCWGG	5 cut(s)	21, 44, 922, 954, 1324
PspEI	GGTNACC	1 cut(s)	1273
PspGI	CCWGG	5 cut(s)	21, 44, 922, 954, 1324
PspN4I	GGNNCC	3 cut(s)	189, 231, 1434
PspPI	GGNCC	3 cut(s)	127, 188, 436
PspPPI	RGGWCCY	1 cut(s)	188
PstNI	CAGNNNCTG	2 cut(s)	51, 416
PsuI	RGATCY	2 cut(s)	958, 1121
RsaI	GTAC	5 cut(s)	5, 55, 358, 644, 1323
RsaNI	GTAC	5 cut(s)	4, 54, 357, 643, 1322
SapI	GCTCTTC	4 cut(s)	150, 482, 990, 1347
SaqAI	TTAA	6 cut(s)	111, 777, 1151, 1286, 1383, 1557
SatI	GCNGC	5 cut(s)	99, 417, 1302, 1530, 1611
Sau3AI	GATC	6 cut(s)	504, 958, 1121, 1390, 1513, 1573
Sau96I	GGNCC	3 cut(s)	127, 188, 436
SchI	GAGTC	1 cut(s)	1185
ScrFI	CCNGG	7 cut(s)	23, 46, 421, 924, 956, 1326, 1682
SduI	GDGCHC	3 cut(s)	136, 232, 499
SexAI	ACCWGGT	1 cut(s)	1324
SfaNI	GCATC	7 cut(s)	157, 392, 847, 1270, 1361, 1516, 1597
SinI	GGWCC	2 cut(s)	188, 436
SseBI	AGGCCT	1 cut(s)	823
SsiI	CCGC	5 cut(s)	7, 164, 347, 1460, 1695
SspI	AATATT	1 cut(s)	775
SspMI	CTAG	4 cut(s)	306, 311, 677, 1239
StuI	AGGCCT	1 cut(s)	823
StyD4I	CCNGG	7 cut(s)	21, 44, 419, 922, 954, 1324, 1680
StyI	CCWWGG	3 cut(s)	183, 381, 588
TaaI	ACNGT	5 cut(s)	53, 259, 1060, 1078, 1381
TaiI	ACGT	1 cut(s)	448
TaqI	TCGA	2 cut(s)	153, 663
TatI	WGTACW	1 cut(s)	642
TfiI	GAWTC	2 cut(s)	467, 1009
Tru1I	TTAA	6 cut(s)	111, 777, 1151, 1286, 1383, 1557
Tru9I	TTAA	6 cut(s)	111, 777, 1151, 1286, 1383, 1557
TscAI	CASTG	4 cut(s)	151, 979, 1081, 1672
TseFI	GTSAC	4 cut(s)	178, 238, 1054, 1097
TseI	GCWGC	5 cut(s)	98, 416, 1301, 1529, 1610
Tsp45I	GTSAC	4 cut(s)	178, 238, 1054, 1097
TspDTI	ATGAA	4 cut(s)	440, 686, 694, 1430
TspRI	CASTG	4 cut(s)	151, 979, 1081, 1672
Van91I	CCANNNNNTGG	1 cut(s)	1331
VpaK11BI	GGWCC	2 cut(s)	188, 436
VspI	ATTAAT	1 cut(s)	777
XapI	RAATTY	2 cut(s)	113, 1404
XspI	CTAG	4 cut(s)	306, 311, 677, 1239
Zsp2I	ATGCAT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.