RchiOBHm_Chr4g0396571
TCP Family

Belongs to the chaperonin (HSP60) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0004623
Physical Location & Seq
Forward (+)
12708417 .. 12713714
5298 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36894

Sequence Viewer

Length: 1722 bp
ATGTATCGCCTCGCTTCCAAAGCTCGGGTTGCTAGGAACAGTGCCCAGCAGATTGGTGGTAGGTTGAGTTGGAGCAGAAACTATGCAGCAAAAGACATTAAATTTGGCGTGGAGGCCCGAGCCCTCATGCTCAATGGTGTCGAAGACCTCGCCGATGCTGTTAAAGTCACAATGGGCCCTAAGGGTCGTAATGTGGTTATTGAGCAAAGCTTTGGCGCACCCAAAGTAACAAAAGACGGTGTAACAGTTGCAAAAAGTATCGAGTTTAAGGATAAAGTTAAGAATGTTGGAGCTAGCCTTGTAAAACAGGTTGCTAATGCCACAAATGATGTAGCGGGTGATGGTACTACTTGTGCTACAATCCTGACAAGAGCTATCTACACTGAAGGATGCAAGTCAGTTGCTGCTGGTATGAACGCCATGGACCTAAGACGTGGTATTAACATGGCAGTTGATTCTGTAGTAACTAACTTGAAGAGCAGAGCCCGAATGATTAGCACTTCTGAAGAGATAGCACAGGTTGGAACAATATCGGCAAATGGCGAGAGAGAAATCGGTGAATTGATTGCAAAGGCCATGGAGAAGGTTGGCAAGGAAGGAGTAATCACGATCGCTGATGGAAAAACATTGTATAACGAGTTGGAAGTTGTTGAGGGCATGAAGCTAGACAGAGGCTACATATCTCCTCATTTCATCACCAACACAAAAAATCAAAAATGTGAATTGGAAGATCCTTTAGTTCTAATCCATGAGAAGAAAGTCTCAAATATTAATGCTGTGATTAAAGTATTGGAGTTGGCTTTGAAGAGGCAAAAGCCTTTGCTGATTGTCGCAGAAGATGTGGAAAGTGATGCACTTGCAACACTTATATTAAATAAGCTTCGTGCTGGAATCAAGGTTTGTGCTATCAAAGCCCCTGGTTTCGGGGAAAATAGGAAATCCAATCTGCAGGATCTTGCAGTTCTCACAGGTGGCACTGTTATTACTGAAGAGCTGGGTTTGAACCTTGAGAAAGTGGATCTGGATATGCTTGGAACTTGCAAAAAGGTCACAATTTCAAAAGATGACACTGTAATTCTTGACGGTGCTGGTGACAAGAAGGAAATTGAGGAAAGATGTGAACAGATTCGGTCAGCAATTGAAGCAAGCACTTCTGATTATGACAGAGAGAAGTTACAAGAGAGACTGGCAAAACTTTCTGGTGGTGTTGCTGTGTTGAAGATTGGAGGAGCTAGTGAAGCTGAAGTTAGTGAGAAGAAGGATAGGGTTACTGACGCCCTGAATGCCACAAAGGCAGCCGTTGAAGAGGGTATAGTAGCAGGTGGTGGTGTTGCAGTCCTTTATGCAGCTAAAGAGTTGGACAAACTTCCAACTGCTAACTTTGATCAGAAGATTGGAGTTCAGATTATTCAGAATGCTCTGAAGGCACCTGTCCACACAATTGCTTCTAATGCGGGGGTCGAAGGAGCTGTTGTTGTTGGTAAGCTCTTGGAGCAAGATAACCCTGATCTGGGATATGATGCAGCTAAAGGTGAATATGTTGATATGGTCAAAGCTGGAATAATAGACCCATTGAAAGTAATTAGGACCGCTTTAACGGATGCTGCAAGTATTTCATCTTTGCTGACAACTACTGAAGCCGTCGTAGTTGAACTTCCTAGTGAGAAGGAGACCCCGGCAATGGGCGGTGGCATGGGTGGCATGGGTGGCATGGATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005507 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006457 GO:0006458 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006950 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0017076 GO:0022626 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042788 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046686 GO:0046872 GO:0046907 GO:0046914 GO:0050896 GO:0051082 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061077 GO:0065002 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0071944 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152
Pfam Domains
Protein Families
Cpn60_TCP1

Protein Analysis

573

Amino Acids

60.79

Weight (kDa)

5.71

Isoelectric Point (pI)

25.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 50 - 550 4.9e-69 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1310
Acc36I ACCTGC 1 cut(s) 1310
AccB1I GGYRCC 1 cut(s) 1426
AciI CCGC 4 cut(s) 335, 1454, 1590, 1686
AclWI GGATC 3 cut(s) 725, 960, 1026
AcsI RAATTY 1 cut(s) 101
AcuI CTGAAG 6 cut(s) 405, 525, 1008, 1263, 1442, 1656
AcyI GRCGYC 1 cut(s) 1275
AfaI GTAC 1 cut(s) 346
AfiI CCNNNNNNNGG 6 cut(s) 24, 923, 1510, 1511, 1681, 1682
AgsI TTSAA 9 cut(s) 475, 805, 1003, 1059, 1142, 1219, 1304, 1576, 1652
AjiI CACGTC 1 cut(s) 434
AjnI CCWGG 1 cut(s) 916
Alw26I GTCTC 3 cut(s) 766, 1177, 1664
AlwI GGATC 3 cut(s) 725, 960, 1026
AlwNI CAGNNNCTG 1 cut(s) 404
Ama87I CYCGRG 2 cut(s) 24, 117
AoxI GGCC 3 cut(s) 114, 175, 573
ApaI GGGCCC 1 cut(s) 179
ApeKI GCWGC 6 cut(s) 86, 404, 1295, 1346, 1523, 1604
ApoI RAATTY 1 cut(s) 101
ArsI GACNNNNNNTTYG 2 cut(s) 86, 118
AseI ATTAAT 1 cut(s) 771
Asp700I GAANNNNTTC 1 cut(s) 1125
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 5 cut(s) 115, 175, 176, 424, 1587
AsuC2I CCSGG 1 cut(s) 1676
AsuHPI GGTGA 5 cut(s) 350, 569, 688, 1103, 1544
AsuNHI GCTAGC 1 cut(s) 293
AvaI CYCGRG 2 cut(s) 24, 117
AvaII GGWCC 2 cut(s) 424, 1587
AxyI CCTNAGG 1 cut(s) 180
BaeGI GKGCMC 2 cut(s) 46, 179
BanI GGYRCC 1 cut(s) 1426
BanII GRGCYC 3 cut(s) 124, 179, 487
BarI GAAGNNNNNNTAC 2 cut(s) 1638, 1670
BbsI GAAGAC 1 cut(s) 150
BbvI GCAGC 6 cut(s) 98, 391, 1307, 1358, 1535, 1591
BccI CCATC 2 cut(s) 335, 611
BceAI ACGGC 2 cut(s) 1283, 1625
BciT130I CCWGG 1 cut(s) 918
BclI TGATCA 1 cut(s) 1384
BcnI CCSGG 1 cut(s) 1676
BcoDI GTCTC 3 cut(s) 766, 1177, 1664
BfaI CTAG 5 cut(s) 33, 294, 665, 1233, 1659
BfmI CTRYAG 2 cut(s) 459, 947
BfuAI ACCTGC 1 cut(s) 1310
BglI GCCNNNNNGGC 1 cut(s) 1292
BisI GCNGC 6 cut(s) 87, 405, 1296, 1347, 1524, 1605
BlsI GCNGC 6 cut(s) 88, 406, 1297, 1348, 1525, 1606
Bme1390I CCNGG 2 cut(s) 918, 1676
Bme18I GGWCC 2 cut(s) 424, 1587
BmeT110I CYCGRG 2 cut(s) 24, 117
BmgBI CACGTC 1 cut(s) 434
BmgT120I GGNCC 5 cut(s) 115, 175, 176, 424, 1587
BmiI GGNNCC 2 cut(s) 177, 1428
BmrFI CCNGG 2 cut(s) 918, 1676
BmsI GCATC 5 cut(s) 145, 380, 841, 1510, 1591
BmtI GCTAGC 1 cut(s) 297
BpiI GAAGAC 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 1 cut(s) 1676
BsaHI GRCGYC 1 cut(s) 1275
BsaI GGTCTC 1 cut(s) 1664
BsaJI CCNNGG 4 cut(s) 420, 576, 916, 1674
BsaXI ACNNNNNCTCC 2 cut(s) 1458, 1488
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 923, 1510, 1511, 1681, 1682
Bse1I ACTGG 1 cut(s) 1191
Bse21I CCTNAGG 1 cut(s) 180
Bse3DI GCAATG 1 cut(s) 1686
BseBI CCWGG 1 cut(s) 918
BseDI CCNNGG 4 cut(s) 420, 576, 916, 1674
BseGI GGATG 2 cut(s) 395, 1606
BseLI CCNNNNNNNGG 6 cut(s) 24, 923, 1510, 1511, 1681, 1682
BseMI GCAATG 1 cut(s) 1686
BseNI ACTGG 1 cut(s) 1191
BseRI GAGGAG 2 cut(s) 675, 1242
BseSI GKGCMC 2 cut(s) 46, 179
BseXI GCAGC 6 cut(s) 98, 391, 1307, 1358, 1535, 1591
BseYI CCCAGC 2 cut(s) 45, 994
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 3 cut(s) 116, 177, 575
BshNI GGYRCC 1 cut(s) 1426
BsiEI CGRYCG 1 cut(s) 612
BsiHKCI CYCGRG 2 cut(s) 24, 117
BsiSI CCGG 1 cut(s) 1676
BslI CCNNNNNNNGG 6 cut(s) 24, 923, 1510, 1511, 1681, 1682
BsmAI GTCTC 3 cut(s) 766, 1177, 1664
BsmI GAATGC 2 cut(s) 1288, 1420
BsnI GGCC 3 cut(s) 116, 177, 575
Bso31I GGTCTC 1 cut(s) 1664
BsoBI CYCGRG 2 cut(s) 24, 117
Bsp120I GGGCCC 1 cut(s) 175
Bsp1286I GDGCHC 4 cut(s) 46, 124, 179, 487
Bsp143I GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
Bsp19I CCATGG 2 cut(s) 420, 576
BspACI CCGC 4 cut(s) 335, 1454, 1590, 1686
BspANI GGCC 3 cut(s) 116, 177, 575
BspLI GGNNCC 2 cut(s) 177, 1428
BspMAI CTGCAG 1 cut(s) 951
BspMI ACCTGC 1 cut(s) 1310
BspOI GCTAGC 1 cut(s) 297
BspPI GGATC 3 cut(s) 725, 960, 1026
BspQI GCTCTTC 2 cut(s) 470, 984
BspT107I GGYRCC 1 cut(s) 1426
BspTNI GGTCTC 1 cut(s) 1664
BsrDI GCAATG 1 cut(s) 1686
BsrI ACTGG 1 cut(s) 1191
BssECI CCNNGG 4 cut(s) 420, 576, 916, 1674
BssMI GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
BssNI GRCGYC 1 cut(s) 1275
BssT1I CCWWGG 2 cut(s) 420, 576
Bst2UI CCWGG 1 cut(s) 918
Bst4CI ACNGT 6 cut(s) 41, 239, 247, 979, 1072, 1085
Bst6I CTCTTC 5 cut(s) 470, 501, 800, 984, 1299
BstACI GRCGYC 1 cut(s) 1275
BstC8I GCNNGC 2 cut(s) 295, 1147
BstDEI CTNAG 2 cut(s) 180, 428
BstDSI CCRYGG 2 cut(s) 420, 576
BstF5I GGATG 2 cut(s) 395, 1606
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 6 cut(s) 612, 733, 955, 1021, 1387, 1510
BstMAI GTCTC 3 cut(s) 766, 1177, 1664
BstMBI GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
BstMCI CGRYCG 1 cut(s) 612
BstNI CCWGG 1 cut(s) 918
BstSCI CCNGG 2 cut(s) 916, 1674
BstSFI CTRYAG 2 cut(s) 459, 947
BstSLI GKGCMC 2 cut(s) 46, 179
BstV1I GCAGC 6 cut(s) 98, 391, 1307, 1358, 1535, 1591
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 3 cut(s) 730, 952, 1018
BstXI CCANNNNNNTGG 1 cut(s) 53
BstYI RGATCY 3 cut(s) 730, 952, 1018
Bsu36I CCTNAGG 1 cut(s) 180
BsuRI GGCC 3 cut(s) 116, 177, 575
BtgI CCRYGG 2 cut(s) 420, 576
BtrI CACGTC 1 cut(s) 434
BtsCI GGATG 2 cut(s) 395, 1606
BtsIMutI CAGTG 4 cut(s) 46, 381, 975, 1068
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 2 cut(s) 295, 1147
CaiI CAGNNNCTG 1 cut(s) 404
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 5 cut(s) 115, 175, 176, 424, 1587
CseI GACGC 1 cut(s) 1283
Csp6I GTAC 1 cut(s) 345
CviAII CATG 9 cut(s) 127, 421, 445, 577, 658, 749, 1693, 1702, 1711
CviQI GTAC 1 cut(s) 345
DdeI CTNAG 2 cut(s) 180, 428
DpnI GATC 6 cut(s) 611, 732, 954, 1020, 1386, 1509
DpnII GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
Eam1104I CTCTTC 5 cut(s) 470, 501, 800, 984, 1299
EarI CTCTTC 5 cut(s) 470, 501, 800, 984, 1299
Eco130I CCWWGG 2 cut(s) 420, 576
Eco24I GRGCYC 3 cut(s) 124, 179, 487
Eco31I GGTCTC 1 cut(s) 1664
Eco47I GGWCC 2 cut(s) 424, 1587
Eco57I CTGAAG 6 cut(s) 405, 525, 1008, 1263, 1442, 1656
Eco81I CCTNAGG 1 cut(s) 180
Eco88I CYCGRG 2 cut(s) 24, 117
EcoO109I RGGNCCY 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 916
EcoT14I CCWWGG 2 cut(s) 420, 576
EcoT38I GRGCYC 3 cut(s) 124, 179, 487
ErhI CCWWGG 2 cut(s) 420, 576
FaeI CATG 9 cut(s) 130, 424, 448, 580, 661, 752, 1696, 1705, 1714
FatI CATG 9 cut(s) 126, 420, 444, 576, 657, 748, 1692, 1701, 1710
FauI CCCGC 2 cut(s) 328, 1447
FbaI TGATCA 1 cut(s) 1384
Fnu4HI GCNGC 6 cut(s) 87, 405, 1296, 1347, 1524, 1605
FokI GGATG 2 cut(s) 402, 1613
FriOI GRGCYC 3 cut(s) 124, 179, 487
Fsp4HI GCNGC 6 cut(s) 87, 405, 1296, 1347, 1524, 1605
FspBI CTAG 5 cut(s) 33, 294, 665, 1233, 1659
GlaI GCGC 1 cut(s) 217
GluI GCNGC 6 cut(s) 87, 405, 1296, 1347, 1524, 1605
GsaI CCCAGC 2 cut(s) 49, 998
HaeIII GGCC 3 cut(s) 116, 177, 575
HapII CCGG 1 cut(s) 1676
HgaI GACGC 1 cut(s) 1283
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 1275
Hin1II CATG 9 cut(s) 130, 424, 448, 580, 661, 752, 1696, 1705, 1714
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HindIII AAGCTT 2 cut(s) 208, 878
HinfI GANTC 3 cut(s) 455, 891, 1126
HpaII CCGG 1 cut(s) 1676
HphI GGTGA 5 cut(s) 350, 569, 688, 1103, 1544
Hpy166II GTNNAC 2 cut(s) 1121, 1435
Hpy188I TCNGA 6 cut(s) 505, 1156, 1389, 1404, 1413, 1422
Hpy188III TCNNGA 4 cut(s) 364, 607, 1022, 1079
Hpy8I GTNNAC 2 cut(s) 1121, 1435
Hpy99I CGWCG 1 cut(s) 1646
HpyAV CCTTC 8 cut(s) 380, 577, 590, 1093, 1252, 1417, 1457, 1660
HpyCH4III ACNGT 6 cut(s) 41, 239, 247, 979, 1072, 1085
HpyCH4IV ACGT 1 cut(s) 433
HpyF3I CTNAG 2 cut(s) 180, 428
HpySE526I ACGT 1 cut(s) 433
Hsp92I GRCGYC 1 cut(s) 1275
Hsp92II CATG 9 cut(s) 130, 424, 448, 580, 661, 752, 1696, 1705, 1714
HspAI GCGC 1 cut(s) 216
Ksp22I TGATCA 1 cut(s) 1384
Kzo9I GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
LguI GCTCTTC 2 cut(s) 470, 984
LmnI GCTCC 5 cut(s) 72, 290, 1229, 1466, 1492
Lsp1109I GCAGC 6 cut(s) 98, 391, 1307, 1358, 1535, 1591
LweI GCATC 5 cut(s) 145, 380, 841, 1510, 1591
MaeI CTAG 5 cut(s) 33, 294, 665, 1233, 1659
MaeII ACGT 1 cut(s) 433
MaeIII GTNAC 8 cut(s) 166, 226, 241, 463, 1048, 1091, 1173, 1267
MalI GATC 6 cut(s) 611, 732, 954, 1020, 1386, 1509
MboI GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
MfeI CAATTG 2 cut(s) 1137, 1440
MflI RGATCY 3 cut(s) 730, 952, 1018
MhlI GDGCHC 4 cut(s) 46, 124, 179, 487
MluCI AATT 9 cut(s) 101, 560, 722, 1053, 1074, 1104, 1137, 1440, 1581
MmeI TCCRAC 6 cut(s) 50, 268, 502, 621, 1338, 1394
MroXI GAANNNNTTC 1 cut(s) 1125
MseI TTAA 9 cut(s) 99, 162, 267, 279, 441, 771, 783, 872, 1595
MspI CCGG 1 cut(s) 1676
MspR9I CCNGG 2 cut(s) 918, 1676
MunI CAATTG 2 cut(s) 1137, 1440
Mva1269I GAATGC 2 cut(s) 1288, 1420
MvaI CCWGG 1 cut(s) 918
NciI CCSGG 1 cut(s) 1676
NcoI CCATGG 2 cut(s) 420, 576
NdeII GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
NheI GCTAGC 1 cut(s) 293
NlaIII CATG 9 cut(s) 130, 424, 448, 580, 661, 752, 1696, 1705, 1714
NlaIV GGNNCC 2 cut(s) 177, 1428
NmuCI GTSAC 3 cut(s) 166, 1048, 1091
PaqCI CACCTGC 1 cut(s) 1310
PciSI GCTCTTC 2 cut(s) 470, 984
PctI GAATGC 2 cut(s) 1288, 1420
PdmI GAANNNNTTC 1 cut(s) 1125
PfeI GAWTC 3 cut(s) 455, 891, 1126
PkrI GCNGC 6 cut(s) 88, 406, 1297, 1348, 1525, 1606
Ple19I CGATCG 1 cut(s) 612
PshBI ATTAAT 1 cut(s) 771
Psp6I CCWGG 1 cut(s) 916
PspFI CCCAGC 2 cut(s) 45, 994
PspGI CCWGG 1 cut(s) 916
PspN4I GGNNCC 2 cut(s) 177, 1428
PspOMI GGGCCC 1 cut(s) 175
PspPI GGNCC 5 cut(s) 115, 175, 176, 424, 1587
PstI CTGCAG 1 cut(s) 951
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 3 cut(s) 730, 952, 1018
PvuI CGATCG 1 cut(s) 612
RsaI GTAC 1 cut(s) 346
RsaNI GTAC 1 cut(s) 345
SapI GCTCTTC 2 cut(s) 470, 984
SaqAI TTAA 9 cut(s) 99, 162, 267, 279, 441, 771, 783, 872, 1595
SatI GCNGC 6 cut(s) 87, 405, 1296, 1347, 1524, 1605
Sau3AI GATC 6 cut(s) 609, 730, 952, 1018, 1384, 1507
Sau96I GGNCC 5 cut(s) 115, 175, 176, 424, 1587
ScrFI CCNGG 2 cut(s) 918, 1676
SduI GDGCHC 4 cut(s) 46, 124, 179, 487
SfaNI GCATC 5 cut(s) 145, 380, 841, 1510, 1591
SfcI CTRYAG 2 cut(s) 459, 947
SinI GGWCC 2 cut(s) 424, 1587
SmlI CTYRAG 1 cut(s) 1007
SmoI CTYRAG 1 cut(s) 1007
Sse9I AATT 9 cut(s) 101, 560, 722, 1053, 1074, 1104, 1137, 1440, 1581
SsiI CCGC 4 cut(s) 335, 1454, 1590, 1686
SspI AATATT 1 cut(s) 769
SspMI CTAG 5 cut(s) 33, 294, 665, 1233, 1659
StyD4I CCNGG 2 cut(s) 916, 1674
StyI CCWWGG 2 cut(s) 420, 576
TaaI ACNGT 6 cut(s) 41, 239, 247, 979, 1072, 1085
TaiI ACGT 1 cut(s) 436
TaqI TCGA 3 cut(s) 141, 261, 1461
TaqII GACCGA 1 cut(s) 1119
TasI AATT 9 cut(s) 101, 560, 722, 1053, 1074, 1104, 1137, 1440, 1581
TfiI GAWTC 3 cut(s) 455, 891, 1126
Tru1I TTAA 9 cut(s) 99, 162, 267, 279, 441, 771, 783, 872, 1595
Tru9I TTAA 9 cut(s) 99, 162, 267, 279, 441, 771, 783, 872, 1595
TscAI CASTG 4 cut(s) 46, 388, 982, 1075
TseFI GTSAC 3 cut(s) 166, 1048, 1091
TseI GCWGC 6 cut(s) 86, 404, 1295, 1346, 1523, 1604
Tsp45I GTSAC 3 cut(s) 166, 1048, 1091
TspDTI ATGAA 4 cut(s) 428, 674, 682, 1605
TspGWI ACGGA 1 cut(s) 1613
TspRI CASTG 4 cut(s) 46, 388, 982, 1075
VpaK11BI GGWCC 2 cut(s) 424, 1587
VspI ATTAAT 1 cut(s) 771
XapI RAATTY 1 cut(s) 101
XcmI CCANNNNNNNNNTGG 1 cut(s) 53
XmnI GAANNNNTTC 1 cut(s) 1125
XspI CTAG 5 cut(s) 33, 294, 665, 1233, 1659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.