Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004623

Physical Location & Seq

Genomic Coordinates Reverse (-)

48861520 .. 48866593

Gene Structure 5074 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25609

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTACCGCTTCGCCACTAACCTCGCCTCCAAAGCCAGGTTGGCTAAGAACAGTGGCCAGCAGATTGGCAGCAGAATAAGTTGGAGAAGGAACTATGCGGCCAAGGATATTAAATTCGGTGTGGAAGCCCGATCGTTGATGCTTAGGGGTGTGGAAGAGCTTGCCGATGCTGTTAAAGTCACAATGGGGCCAAAAGGACGCAATGTTGTCCTGGAGCAAAGCTTTGGAGCTCCCAAAGTGACAAAGGATGGTGTGACTGTAGCAAAGAGCATTGAGTTCAAAGACAAAGTCAAAAACATTGGTGCTAGTCTTGTAAAGCAGGTGGCAAATGCTACAAATGATGCTGCGGGCGATGGTACCACTTGTGCTACAGTTCTCACCCGTGCCATATTTACCGAAGGATGCAAGTCAGTGGCAGCTGGAATGAATGCTATGGACCTAAGACGAGGCATCACAATGGCAGTTGATTGTGTTGTGACAAACTTGAAGAGCAGGGCTCGGATGATCAGTACATCAGAGGAAATAGCTCAGGTTGGCACAATATCAGCTAATGGTGACAGAGAGATTGGTGAGCTAATAGCTAAGGCTATGGAGAAAGTTGGTAAAGAAGGTGTTATCACCATATCTGATGGAAAAACACTCGACAATGAATTGGAGGTTGTTGAAGGAATGAAGCTGGACAGGGGTTATATATCCCCTTATTTTATCACCAATCAGAAGAACCAAAAATGTGAATTGGACGATCCACTTGTCTTAATCTACGAGAAGAAAATCTCAAATCTAAATGCTGTAGTGAAAATATTAGAGCTGGCATTGAAGAAACAAAGGCCTCTGCTGATTGTTGCTGAAGATTTTGAAAGTGAAGCACTTGCTACACTCATTTTAAACAAGCTTCGTGCTGGAATTAAGGTCTGTGCAATTAAAGCCCCTGGATTCGGAGAGAACAGGAAGGCAAATCTGCAGGACCTAGCCATTCTTACTGGAGGCGAGGTGATAACTGAAGAGCTTGGTCTGAACCTCGAAAAAGTGGGACCAGAGATGCTTGGCACATGCAAAAGGATTACAGTTTCCAAAGATGATACTGTTATTCTTGATGGGGCTGGTGACAAGAAAGCTATTGAAGAAAGATGTGAACAGTTAAGATCATCAATTGAATTGAGCACTTCTGATTACGACAAGGAGAAGCTACAAGAGCGGCTGGCAAAGATTTCTGGTGGTGTTGCTGTTCTAAAGATTGGCGGAGCTAGTGAAGCAGAAGTCGGTGAAAAGAAGGATAGGGTTACTGATGCTCTGAATGCCACTAAGGCTGCTGTAGAAGAAGGAATTGTACCTGGTGGTGGTGCAGCACTTCTGTATGCCTCCAAAGAGCTGGACAAGTTGCAAACTGCAAACTTTGATCAAAAGATTGGTGTGCAGATCATTCAAAATGCTCTTAAGATGCCTGTATCCACAATTGCTTCGAACGCTGGAGTTGAGGGGGCAGTCGTTGTCGGCAAGCTGTTGGAGCAGGACAATCCTGACCTTGGATATGATGCAGCAAAGGGTGAATATGTAGACATGATAAAGGCCGGGATCATTGATCCCTTGAAAGTCATCAGAACTGCCTTGGTAGATGCTGCAAGTGTCTCCTCGTTAATGACTACCACCGAGGCAGTTGTTGTCTCGCTTCCTGAGAAGGAAGGCCCTGCAGTGGGAGCTGGTATGGGAGGAATGGGAGGCATGGATTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

576

Amino Acids

61.25

Weight (kDa)

5.88

Isoelectric Point (pI)

27.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	54 - 554	8e-71	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004623)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33210 AT2G33210 AT3G23990
fragaria_vesca	FvH4_2g19800 FvH4_4g05420
malus_domestica	MD05G1182500.v1.1 MD10G1170700.v1.1
prunus_persica	Prupe.1G056300_v2.0.a1 Prupe.8G209200_v2.0.a1 Prupe.8G209200_v2.0.a1
pyrus_communis	pycom13g20310
rosa_chinensis	RchiOBHm_Chr4g0396571 RchiOBHm_Chr6g0285501
rosa_laevigata	RLG00000009520 RLG00000012634
rosa_multiflora	Rmu_sc0001781.1_g000002 Rmu_sc0012495.1_g000008
rosa_roxburghii	Rroxscaffold_5G00341420 Rroxscaffold_7G00183070
rosa_rugosa	Rorug03G0349000 Rorug06G0175000
rosa_samantha	Rh4AG070400 Rh4BG068300 Rh4CG076200 Rh4DG065400 Rh6AG286600 Rh6BG287800 Rh6CG289000 Rh6DG281800
rosa_wichuraiana	Rw4G005610 Rw6G024620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	310
Acc36I	ACCTGC	1 cut(s)	310
Acc65I	GGTACC	1 cut(s)	356
AccB1I	GGYRCC	1 cut(s)	356
AccBSI	CCGCTC	1 cut(s)	1195
AccI	GTMKAC	1 cut(s)	1554
AciI	CCGC	5 cut(s)	7, 98, 347, 1195, 1239
AclWI	GGATC	3 cut(s)	737, 1574, 1580
AcoI	YGGCCR	2 cut(s)	55, 99
AcsI	RAATTY	1 cut(s)	113
AcuI	CTGAAG	2 cut(s)	867, 1020
AfaI	GTAC	4 cut(s)	5, 358, 511, 1329
AfiI	CCNNNNNNNGG	6 cut(s)	36, 935, 1337, 1523, 1690, 1691
AflII	CTTAAG	1 cut(s)	1433
AgsI	TTSAA	9 cut(s)	280, 487, 665, 817, 857, 1121, 1154, 1424, 1588
AjnI	CCWGG	4 cut(s)	35, 210, 928, 1330
Alw21I	GWGCWC	2 cut(s)	232, 1163
Alw26I	GTCTC	2 cut(s)	1630, 1666
AlwI	GGATC	3 cut(s)	737, 1574, 1580
AoxI	GGCC	6 cut(s)	55, 99, 188, 827, 1566, 1681
ApeKI	GCWGC	7 cut(s)	69, 344, 416, 1307, 1343, 1535, 1616
ApoI	RAATTY	1 cut(s)	113
ArsI	GACNNNNNNTTYG	2 cut(s)	273, 305
Asp718I	GGTACC	1 cut(s)	356
AspS9I	GGNCC	5 cut(s)	188, 436, 964, 1031, 1682
AsuC2I	CCSGG	1 cut(s)	1570
AsuHPI	GGTGA	9 cut(s)	370, 566, 581, 610, 700, 1003, 1115, 1274, 1556
AsuII	TTCGAA	1 cut(s)	1460
AvaII	GGWCC	3 cut(s)	436, 964, 1031
BalI	TGGCCA	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	356
BanII	GRGCYC	2 cut(s)	232, 499
BarI	GAAGNNNNNNTAC	2 cut(s)	1311, 1343
Bbv12I	GWGCWC	2 cut(s)	232, 1163
BbvI	GCAGC	7 cut(s)	81, 331, 428, 1294, 1355, 1547, 1603
BccI	CCATC	4 cut(s)	242, 347, 623, 1088
BciT130I	CCWGG	4 cut(s)	37, 212, 930, 1332
BciVI	GTATCC	1 cut(s)	1456
BclI	TGATCA	2 cut(s)	504, 1396
BcnI	CCSGG	1 cut(s)	1570
BcoDI	GTCTC	2 cut(s)	1630, 1666
BfaI	CTAG	4 cut(s)	306, 968, 1245, 1729
BfmI	CTRYAG	6 cut(s)	258, 369, 789, 959, 1311, 1686
BfrI	CTTAAG	1 cut(s)	1433
BfuAI	ACCTGC	1 cut(s)	310
BfuI	GTATCC	1 cut(s)	1456
BglI	GCCNNNNNGGC	2 cut(s)	41, 1304
BisI	GCNGC	9 cut(s)	70, 99, 345, 417, 1196, 1308, 1344, 1536, 1617
BlsI	GCNGC	9 cut(s)	71, 100, 346, 418, 1197, 1309, 1345, 1537, 1618
Bme1390I	CCNGG	5 cut(s)	37, 212, 930, 1332, 1570
Bme18I	GGWCC	3 cut(s)	436, 964, 1031
BmgT120I	GGNCC	5 cut(s)	188, 436, 964, 1031, 1682
BmiI	GGNNCC	3 cut(s)	189, 358, 1032
BmrFI	CCNGG	5 cut(s)	37, 212, 930, 1332, 1570
BplI	GAGNNNNNCTC	2 cut(s)	481, 513
BpmI	CTGGAG	3 cut(s)	233, 1002, 1488
Bpu10I	CCTNAGC	3 cut(s)	143, 528, 582
Bpu14I	TTCGAA	1 cut(s)	1460
BpuMI	CCSGG	1 cut(s)	1570
BsaJI	CCNNGG	5 cut(s)	102, 928, 1522, 1605, 1647
BsaXI	ACNNNNNCTCC	4 cut(s)	11, 41, 975, 1005
Bsc4I	CCNNNNNNNGG	6 cut(s)	36, 935, 1337, 1523, 1690, 1691
Bse1I	ACTGG	1 cut(s)	985
Bse3DI	GCAATG	1 cut(s)	208
BseBI	CCWGG	4 cut(s)	37, 212, 930, 1332
BseDI	CCNNGG	5 cut(s)	102, 928, 1522, 1605, 1647
BseGI	GGATG	3 cut(s)	253, 407, 507
BseLI	CCNNNNNNNGG	6 cut(s)	36, 935, 1337, 1523, 1690, 1691
BseMI	GCAATG	1 cut(s)	208
BseMII	CTCAG	2 cut(s)	542, 1662
BseNI	ACTGG	1 cut(s)	985
BseRI	GAGGAG	1 cut(s)	1618
BseXI	GCAGC	7 cut(s)	81, 331, 428, 1294, 1355, 1547, 1603
BsgI	GTGCAG	2 cut(s)	1362, 1433
Bsh1285I	CGRYCG	1 cut(s)	134
BshFI	GGCC	6 cut(s)	57, 101, 190, 829, 1568, 1683
BshNI	GGYRCC	1 cut(s)	356
BsiEI	CGRYCG	1 cut(s)	134
BsiHKAI	GWGCWC	2 cut(s)	232, 1163
BsiSI	CCGG	1 cut(s)	1569
BslFI	GGGAC	1 cut(s)	1044
BslI	CCNNNNNNNGG	6 cut(s)	36, 935, 1337, 1523, 1690, 1691
BsmAI	GTCTC	2 cut(s)	1630, 1666
BsmFI	GGGAC	1 cut(s)	1044
BsmI	GAATGC	2 cut(s)	433, 1300
BsnI	GGCC	6 cut(s)	57, 101, 190, 829, 1568, 1683
Bsp119I	TTCGAA	1 cut(s)	1460
Bsp1286I	GDGCHC	3 cut(s)	232, 499, 1163
Bsp143I	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
BspACI	CCGC	5 cut(s)	7, 98, 347, 1195, 1239
BspANI	GGCC	6 cut(s)	57, 101, 190, 829, 1568, 1683
BspCNI	CTCAG	2 cut(s)	541, 1663
BspLI	GGNNCC	3 cut(s)	189, 358, 1032
BspMAI	CTGCAG	2 cut(s)	963, 1690
BspMI	ACCTGC	1 cut(s)	310
BspPI	GGATC	3 cut(s)	737, 1574, 1580
BspQI	GCTCTTC	3 cut(s)	150, 482, 996
BspT104I	TTCGAA	1 cut(s)	1460
BspT107I	GGYRCC	1 cut(s)	356
BspTI	CTTAAG	1 cut(s)	1433
BsrBI	CCGCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	208
BsrI	ACTGG	1 cut(s)	985
BssECI	CCNNGG	5 cut(s)	102, 928, 1522, 1605, 1647
BssMI	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
BssT1I	CCWWGG	3 cut(s)	102, 1522, 1605
Bst2UI	CCWGG	4 cut(s)	37, 212, 930, 1332
Bst4CI	ACNGT	6 cut(s)	53, 259, 373, 1066, 1084, 1137
Bst6I	CTCTTC	3 cut(s)	150, 482, 996
BstAFI	CTTAAG	1 cut(s)	1433
BstBI	TTCGAA	1 cut(s)	1460
BstC8I	GCNNGC	6 cut(s)	59, 162, 349, 810, 1200, 1496
BstDEI	CTNAG	7 cut(s)	45, 143, 440, 528, 582, 1302, 1671
BstF5I	GGATG	3 cut(s)	253, 407, 507
BstKTI	GATC	8 cut(s)	134, 507, 745, 1145, 1399, 1419, 1575, 1582
BstMAI	GTCTC	2 cut(s)	1630, 1666
BstMBI	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
BstMCI	CGRYCG	1 cut(s)	134
BstNI	CCWGG	4 cut(s)	37, 212, 930, 1332
BstNSI	RCATGY	1 cut(s)	1053
BstSCI	CCNGG	5 cut(s)	35, 210, 928, 1330, 1568
BstSFI	CTRYAG	6 cut(s)	258, 369, 789, 959, 1311, 1686
BstV1I	GCAGC	7 cut(s)	81, 331, 428, 1294, 1355, 1547, 1603
BstXI	CCANNNNNNTGG	2 cut(s)	65, 1369
BsuI	GTATCC	1 cut(s)	1456
BsuRI	GGCC	6 cut(s)	57, 101, 190, 829, 1568, 1683
BtgZI	GCGATG	1 cut(s)	366
BtsCI	GGATG	3 cut(s)	253, 407, 507
BtsI	GCAGTG	1 cut(s)	1695
BtsIMutI	CAGTG	3 cut(s)	58, 417, 1695
BveI	ACCTGC	1 cut(s)	310
Cac8I	GCNNGC	6 cut(s)	59, 162, 349, 810, 1200, 1496
Cfr13I	GGNCC	5 cut(s)	188, 436, 964, 1031, 1682
CseI	GACGC	1 cut(s)	207
CsiI	ACCWGGT	1 cut(s)	1330
Csp6I	GTAC	4 cut(s)	4, 357, 510, 1328
CviAII	CATG	3 cut(s)	1050, 1558, 1720
CviQI	GTAC	4 cut(s)	4, 357, 510, 1328
DdeI	CTNAG	7 cut(s)	45, 143, 440, 528, 582, 1302, 1671
DpnI	GATC	8 cut(s)	133, 506, 744, 1144, 1398, 1418, 1574, 1581
DpnII	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
DraI	TTTAAA	1 cut(s)	885
EaeI	YGGCCR	2 cut(s)	55, 99
Eam1104I	CTCTTC	3 cut(s)	150, 482, 996
EarI	CTCTTC	3 cut(s)	150, 482, 996
EciI	GGCGGA	1 cut(s)	1254
Ecl136II	GAGCTC	1 cut(s)	230
Eco130I	CCWWGG	3 cut(s)	102, 1522, 1605
Eco147I	AGGCCT	1 cut(s)	829
Eco24I	GRGCYC	2 cut(s)	232, 499
Eco47I	GGWCC	3 cut(s)	436, 964, 1031
Eco53kI	GAGCTC	1 cut(s)	230
Eco57I	CTGAAG	2 cut(s)	867, 1020
EcoICRI	GAGCTC	1 cut(s)	230
EcoO109I	RGGNCCY	2 cut(s)	964, 1682
EcoRII	CCWGG	4 cut(s)	35, 210, 928, 1330
EcoT14I	CCWWGG	3 cut(s)	102, 1522, 1605
EcoT38I	GRGCYC	2 cut(s)	232, 499
ErhI	CCWWGG	3 cut(s)	102, 1522, 1605
FaeI	CATG	3 cut(s)	1053, 1561, 1723
FaqI	GGGAC	1 cut(s)	1044
FatI	CATG	3 cut(s)	1049, 1557, 1719
FauI	CCCGC	1 cut(s)	340
FbaI	TGATCA	2 cut(s)	504, 1396
FblI	GTMKAC	1 cut(s)	1554
Fnu4HI	GCNGC	9 cut(s)	70, 99, 345, 417, 1196, 1308, 1344, 1536, 1617
FokI	GGATG	3 cut(s)	260, 414, 514
FriOI	GRGCYC	2 cut(s)	232, 499
Fsp4HI	GCNGC	9 cut(s)	70, 99, 345, 417, 1196, 1308, 1344, 1536, 1617
FspBI	CTAG	4 cut(s)	306, 968, 1245, 1729
GluI	GCNGC	9 cut(s)	70, 99, 345, 417, 1196, 1308, 1344, 1536, 1617
GsuI	CTGGAG	3 cut(s)	233, 1002, 1488
HaeIII	GGCC	6 cut(s)	57, 101, 190, 829, 1568, 1683
HapII	CCGG	1 cut(s)	1569
HgaI	GACGC	1 cut(s)	207
Hin1II	CATG	3 cut(s)	1053, 1561, 1723
HindIII	AAGCTT	2 cut(s)	220, 890
HinfI	GANTC	1 cut(s)	933
HpaII	CCGG	1 cut(s)	1569
HphI	GGTGA	9 cut(s)	370, 566, 581, 610, 700, 1003, 1115, 1274, 1556
Hpy166II	GTNNAC	2 cut(s)	1133, 1555
Hpy188I	TCNGA	9 cut(s)	501, 517, 628, 717, 938, 1014, 1168, 1293, 1598
Hpy188III	TCNNGA	3 cut(s)	1091, 1517, 1670
Hpy8I	GTNNAC	2 cut(s)	1133, 1555
HpyAV	CCTTC	9 cut(s)	81, 392, 602, 659, 943, 1264, 1313, 1669, 1673
HpyCH4III	ACNGT	6 cut(s)	53, 259, 373, 1066, 1084, 1137
HpyF3I	CTNAG	7 cut(s)	45, 143, 440, 528, 582, 1302, 1671
Hsp92II	CATG	3 cut(s)	1053, 1561, 1723
KpnI	GGTACC	1 cut(s)	360
Ksp22I	TGATCA	2 cut(s)	504, 1396
Kzo9I	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
LguI	GCTCTTC	3 cut(s)	150, 482, 996
LmnI	GCTCC	6 cut(s)	214, 227, 235, 1241, 1504, 1694
Lsp1109I	GCAGC	7 cut(s)	81, 331, 428, 1294, 1355, 1547, 1603
MabI	ACCWGGT	1 cut(s)	1330
MaeI	CTAG	4 cut(s)	306, 968, 1245, 1729
MaeIII	GTNAC	7 cut(s)	178, 238, 253, 475, 554, 1103, 1279
MalI	GATC	8 cut(s)	133, 506, 744, 1144, 1398, 1418, 1574, 1581
MbiI	CCGCTC	1 cut(s)	1195
MboI	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
MboII	GAAGA	9 cut(s)	167, 499, 730, 778, 829, 860, 1013, 1133, 1328
MfeI	CAATTG	2 cut(s)	1149, 1452
MhlI	GDGCHC	3 cut(s)	232, 499, 1163
MlsI	TGGCCA	1 cut(s)	57
MluCI	AATT	9 cut(s)	113, 650, 734, 903, 918, 1149, 1154, 1323, 1452
MluNI	TGGCCA	1 cut(s)	57
MmeI	TCCRAC	2 cut(s)	62, 1482
Mox20I	TGGCCA	1 cut(s)	57
MscI	TGGCCA	1 cut(s)	57
MseI	TTAA	9 cut(s)	111, 174, 755, 884, 906, 921, 1139, 1434, 1634
MslI	CAYNNNNRTG	1 cut(s)	455
Msp20I	TGGCCA	1 cut(s)	57
MspA1I	CMGCKG	1 cut(s)	419
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	1 cut(s)	1569
MspR9I	CCNGG	5 cut(s)	37, 212, 930, 1332, 1570
MunI	CAATTG	2 cut(s)	1149, 1452
Mva1269I	GAATGC	2 cut(s)	433, 1300
MvaI	CCWGG	4 cut(s)	37, 212, 930, 1332
NciI	CCSGG	1 cut(s)	1570
NdeII	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
NlaIII	CATG	3 cut(s)	1053, 1561, 1723
NlaIV	GGNNCC	3 cut(s)	189, 358, 1032
NmuCI	GTSAC	6 cut(s)	178, 238, 253, 475, 554, 1103
NspI	RCATGY	1 cut(s)	1053
NspV	TTCGAA	1 cut(s)	1460
PaqCI	CACCTGC	1 cut(s)	310
PceI	AGGCCT	1 cut(s)	829
PciSI	GCTCTTC	3 cut(s)	150, 482, 996
PctI	GAATGC	2 cut(s)	433, 1300
PfeI	GAWTC	1 cut(s)	933
PflFI	GACNNNGTC	1 cut(s)	287
PfoI	TCCNGGA	1 cut(s)	210
PkrI	GCNGC	9 cut(s)	71, 100, 346, 418, 1197, 1309, 1345, 1537, 1618
Ple19I	CGATCG	1 cut(s)	134
PpuMI	RGGWCCY	1 cut(s)	964
Psp124BI	GAGCTC	1 cut(s)	232
Psp5II	RGGWCCY	1 cut(s)	964
Psp6I	CCWGG	4 cut(s)	35, 210, 928, 1330
PspGI	CCWGG	4 cut(s)	35, 210, 928, 1330
PspN4I	GGNNCC	3 cut(s)	189, 358, 1032
PspPI	GGNCC	5 cut(s)	188, 436, 964, 1031, 1682
PspPPI	RGGWCCY	1 cut(s)	964
PstI	CTGCAG	2 cut(s)	963, 1690
PsyI	GACNNNGTC	1 cut(s)	287
PvuI	CGATCG	1 cut(s)	134
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	4 cut(s)	5, 358, 511, 1329
RsaNI	GTAC	4 cut(s)	4, 357, 510, 1328
RseI	CAYNNNNRTG	1 cut(s)	455
SacI	GAGCTC	1 cut(s)	232
SapI	GCTCTTC	3 cut(s)	150, 482, 996
SaqAI	TTAA	9 cut(s)	111, 174, 755, 884, 906, 921, 1139, 1434, 1634
SatI	GCNGC	9 cut(s)	70, 99, 345, 417, 1196, 1308, 1344, 1536, 1617
Sau3AI	GATC	8 cut(s)	131, 504, 742, 1142, 1396, 1416, 1572, 1579
Sau96I	GGNCC	5 cut(s)	188, 436, 964, 1031, 1682
ScrFI	CCNGG	5 cut(s)	37, 212, 930, 1332, 1570
SduI	GDGCHC	3 cut(s)	232, 499, 1163
SexAI	ACCWGGT	1 cut(s)	1330
SfcI	CTRYAG	6 cut(s)	258, 369, 789, 959, 1311, 1686
SfuI	TTCGAA	1 cut(s)	1460
SinI	GGWCC	3 cut(s)	436, 964, 1031
SmiMI	CAYNNNNRTG	1 cut(s)	455
SmlI	CTYRAG	1 cut(s)	1433
SmoI	CTYRAG	1 cut(s)	1433
Sse9I	AATT	9 cut(s)	113, 650, 734, 903, 918, 1149, 1154, 1323, 1452
SseBI	AGGCCT	1 cut(s)	829
SsiI	CCGC	5 cut(s)	7, 98, 347, 1195, 1239
SspI	AATATT	1 cut(s)	801
SspMI	CTAG	4 cut(s)	306, 968, 1245, 1729
SstI	GAGCTC	1 cut(s)	232
StuI	AGGCCT	1 cut(s)	829
StyD4I	CCNGG	5 cut(s)	35, 210, 928, 1330, 1568
StyI	CCWWGG	3 cut(s)	102, 1522, 1605
TaaI	ACNGT	6 cut(s)	53, 259, 373, 1066, 1084, 1137
TaqI	TCGA	3 cut(s)	642, 1020, 1460
TasI	AATT	9 cut(s)	113, 650, 734, 903, 918, 1149, 1154, 1323, 1452
TatI	WGTACW	1 cut(s)	509
TauI	GCSGC	2 cut(s)	101, 1198
TfiI	GAWTC	1 cut(s)	933
Tru1I	TTAA	9 cut(s)	111, 174, 755, 884, 906, 921, 1139, 1434, 1634
Tru9I	TTAA	9 cut(s)	111, 174, 755, 884, 906, 921, 1139, 1434, 1634
TscAI	CASTG	3 cut(s)	58, 417, 1695
TseFI	GTSAC	6 cut(s)	178, 238, 253, 475, 554, 1103
TseI	GCWGC	7 cut(s)	69, 344, 416, 1307, 1343, 1535, 1616
Tsp45I	GTSAC	6 cut(s)	178, 238, 253, 475, 554, 1103
TspDTI	ATGAA	3 cut(s)	440, 663, 686
TspRI	CASTG	3 cut(s)	58, 417, 1695
Tth111I	GACNNNGTC	1 cut(s)	287
Vha464I	CTTAAG	1 cut(s)	1433
VpaK11BI	GGWCC	3 cut(s)	436, 964, 1031
XapI	RAATTY	1 cut(s)	113
XceI	RCATGY	1 cut(s)	1053
XcmI	CCANNNNNNNNNTGG	1 cut(s)	37
XmiI	GTMKAC	1 cut(s)	1554
XspI	CTAG	4 cut(s)	306, 968, 1245, 1729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.