dof zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62940 |
| fragaria_vesca | FvH4_5g05330 |
| malus_domestica | MD06G1173600.v1.1 MD14G1180100.v1.1 |
| prunus_persica | Prupe.5G173100_v2.0.a1 |
| pyrus_communis | pycom06g15480 pycom14g14990 |
| rosa_chinensis | RchiOBHm_Chr7g0193511 |
| rosa_laevigata | RLG00000004265 |
| rosa_multiflora | Rmu_sc0006688.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00262040 |
| rosa_rugosa | Rorug07G0009900 |
| rosa_samantha | Rh7AG136800 Rh7BG137100 Rh7CG140400 Rh7DG138200 |
| rosa_wichuraiana | Rw7G011650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 31 |
| AjnI | CCWGG | 1 cut(s) | 212 |
| AluBI | AGCT | 2 cut(s) | 141, 315 |
| AluI | AGCT | 2 cut(s) | 141, 315 |
| AlwI | GGATC | 1 cut(s) | 31 |
| AsuC2I | CCSGG | 1 cut(s) | 21 |
| BccI | CCATC | 2 cut(s) | 250, 353 |
| BciT130I | CCWGG | 1 cut(s) | 214 |
| BclI | TGATCA | 2 cut(s) | 79, 412 |
| BcnI | CCSGG | 1 cut(s) | 21 |
| BfaI | CTAG | 2 cut(s) | 135, 162 |
| BfmI | CTRYAG | 1 cut(s) | 198 |
| Bme1390I | CCNGG | 2 cut(s) | 21, 214 |
| BmrFI | CCNGG | 2 cut(s) | 21, 214 |
| BmsI | GCATC | 2 cut(s) | 75, 102 |
| BpuMI | CCSGG | 1 cut(s) | 21 |
| BsaJI | CCNNGG | 1 cut(s) | 19 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 173, 203 |
| BseBI | CCWGG | 1 cut(s) | 214 |
| BseDI | CCNNGG | 1 cut(s) | 19 |
| BseGI | GGATG | 2 cut(s) | 48, 351 |
| BsiSI | CCGG | 1 cut(s) | 21 |
| BsmI | GAATGC | 1 cut(s) | 214 |
| Bsp143I | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| BspPI | GGATC | 1 cut(s) | 31 |
| BssECI | CCNNGG | 1 cut(s) | 19 |
| BssMI | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| Bst2UI | CCWGG | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 1 cut(s) | 386 |
| BstF5I | GGATG | 2 cut(s) | 48, 351 |
| BstKTI | GATC | 5 cut(s) | 26, 61, 82, 304, 415 |
| BstMBI | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 321 |
| BstNI | CCWGG | 1 cut(s) | 214 |
| BstSCI | CCNGG | 2 cut(s) | 19, 212 |
| BstSFI | CTRYAG | 1 cut(s) | 198 |
| BtsCI | GGATG | 2 cut(s) | 48, 351 |
| CviAII | CATG | 5 cut(s) | 145, 178, 229, 293, 379 |
| CviJI | RGCY | 3 cut(s) | 141, 197, 315 |
| CviKI_1 | RGCY | 3 cut(s) | 141, 197, 315 |
| DpnI | GATC | 5 cut(s) | 25, 60, 81, 303, 414 |
| DpnII | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| Eco32I | GATATC | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 212 |
| EcoRV | GATATC | 1 cut(s) | 42 |
| FaeI | CATG | 5 cut(s) | 148, 181, 232, 296, 382 |
| FatI | CATG | 5 cut(s) | 144, 177, 228, 292, 378 |
| FauNDI | CATATG | 1 cut(s) | 409 |
| FbaI | TGATCA | 2 cut(s) | 79, 412 |
| FokI | GGATG | 2 cut(s) | 35, 358 |
| FspBI | CTAG | 2 cut(s) | 135, 162 |
| HapII | CCGG | 1 cut(s) | 21 |
| Hin1II | CATG | 5 cut(s) | 148, 181, 232, 296, 382 |
| HindIII | AAGCTT | 1 cut(s) | 313 |
| HpaII | CCGG | 1 cut(s) | 21 |
| Hpy188I | TCNGA | 1 cut(s) | 84 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| Hpy99I | CGWCG | 2 cut(s) | 37, 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 386 |
| HpyCH4V | TGCA | 1 cut(s) | 88 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 321 |
| Hsp92II | CATG | 5 cut(s) | 148, 181, 232, 296, 382 |
| Ksp22I | TGATCA | 2 cut(s) | 79, 412 |
| Kzo9I | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| LpnPI | CCDG | 5 cut(s) | 34, 90, 199, 226, 404 |
| LweI | GCATC | 2 cut(s) | 75, 102 |
| MaeI | CTAG | 2 cut(s) | 135, 162 |
| MaeIII | GTNAC | 1 cut(s) | 155 |
| MalI | GATC | 5 cut(s) | 25, 60, 81, 303, 414 |
| MboI | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| MboII | GAAGA | 1 cut(s) | 21 |
| MluCI | AATT | 1 cut(s) | 373 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| MnlI | CCTC | 3 cut(s) | 110, 187, 387 |
| MseI | TTAA | 2 cut(s) | 318, 398 |
| MspI | CCGG | 1 cut(s) | 21 |
| MspR9I | CCNGG | 2 cut(s) | 21, 214 |
| Mva1269I | GAATGC | 1 cut(s) | 214 |
| MvaI | CCWGG | 1 cut(s) | 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 321 |
| NciI | CCSGG | 1 cut(s) | 21 |
| NdeI | CATATG | 1 cut(s) | 409 |
| NdeII | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| NlaIII | CATG | 5 cut(s) | 148, 181, 232, 296, 382 |
| PctI | GAATGC | 1 cut(s) | 214 |
| Psp6I | CCWGG | 1 cut(s) | 212 |
| PspGI | CCWGG | 1 cut(s) | 212 |
| SaqAI | TTAA | 2 cut(s) | 318, 398 |
| Sau3AI | GATC | 5 cut(s) | 23, 58, 79, 301, 412 |
| ScrFI | CCNGG | 2 cut(s) | 21, 214 |
| SetI | ASST | 5 cut(s) | 69, 102, 143, 317, 398 |
| SfaNI | GCATC | 2 cut(s) | 75, 102 |
| SfcI | CTRYAG | 1 cut(s) | 198 |
| Sse9I | AATT | 1 cut(s) | 373 |
| SspMI | CTAG | 2 cut(s) | 135, 162 |
| StyD4I | CCNGG | 2 cut(s) | 19, 212 |
| TaaI | ACNGT | 1 cut(s) | 386 |
| TaqI | TCGA | 1 cut(s) | 38 |
| TaqII | GACCGA | 1 cut(s) | 181 |
| TasI | AATT | 1 cut(s) | 373 |
| Tru1I | TTAA | 2 cut(s) | 318, 398 |
| Tru9I | TTAA | 2 cut(s) | 318, 398 |
| TspDTI | ATGAA | 6 cut(s) | 17, 133, 143, 166, 217, 367 |
| XspI | CTAG | 2 cut(s) | 135, 162 |