pycom14g15460

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0003752
Physical Location & Seq
Forward (+)
18077581 .. 18078558
978 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 978 bp
ATGGCTATTGCTATACTTCTTCTTCTCTTCTTCTCCATTCCCTTCTCCGAATCGAAGCTCACCAAAGATTACTACAAGCAAACTTGTCCAGACTTTCAGAAGATTGTCAGAGACACCGCGTCCCAAAAGCAAGCCGCCCAACCCACCACCGCCGCAGGCACTCTCCGCCTCTTCGTCCACGACTGCTTAGTTGAGGGTTGTGACGGCTCCGTCCTCATTGCCTCCAACCATCTCAACAAAGCTGAGCGCGATGCTGAGATCAACGAATCCCTAGCAGGTGATGGTTTTGAGGTGGTAGTCCGTGCCAAGACCGCCCTGGAGCTCACCTGCCCAGGGATTGTCTCGTGCGCAGACATTCTCGCGGAGGCCACACGTGACCTTGTCACGATGGTTGGTGGACCTTTCTACTCCGTCAGGTTGGGACGAAAAGATGGACAGGTTTCCCTTGCGTCCAAGGTTGAGGGAAACTTGCCAAGAGCAAACCAAACCGTGGATGAGCTCATCAAATTCTTCGCCGCTAGGGGTTTCACAATTGAAGAAATGGTTGCCTTAACTGGTGGACACACAATTGGGTTCTCTCATTGCAAGGAGTTCACTGACAGGCTTTTCCATTACAGCAAAACTACTCCAACAGACCCAGAAATCAACCCTAAATACGCCGAAGGCTTGAAGATGACATGCGGTAACTACACAACTAACCCCGCCATGGCTGCCTTCAACGACGTGATTACACCTGGAAAATTCGATAACATGTACTATCAGAATCTAAAGAGGGGCTTGGGGCTGCTGGCATCGGACCATGCACTTACTAAGGACCCGAGGACGAAGCCTTTTGTGGAGTTGTACTCTACTGACCAGGCGGAGTTTTTCAAGGCTTTTTCTCATGCAATGGAGAAGCTTGGACATCATGAGATTAAGACCGGGCATCAGGGAGAGGTGAGGCGCAGGTGCGACGCGTTTAACTCGCTTCAGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004553 GO:0009044 GO:0016787 GO:0016798 GO:0097599
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

326

Amino Acids

35.85

Weight (kDa)

6.37

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 36 - 284 1.9e-76 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 266, 335, 936
AasI GACNNNNNNGTC 1 cut(s) 209
Acc16I TGCGCA 1 cut(s) 349
Acc36I ACCTGC 3 cut(s) 266, 335, 936
AccB7I CCANNNNNTGG 1 cut(s) 490
AccII CGCG 4 cut(s) 119, 249, 362, 956
AcsI RAATTY 2 cut(s) 506, 740
AcuI CTGAAG 1 cut(s) 953
AcvI CACGTG 1 cut(s) 374
AfaI GTAC 2 cut(s) 755, 845
AfiI CCNNNNNNNGG 3 cut(s) 333, 490, 706
AflIII ACRYGT 3 cut(s) 371, 750, 954
AgsI TTSAA 4 cut(s) 536, 670, 718, 871
AhdI GACNNNNNGTC 1 cut(s) 118
AjiI CACGTC 1 cut(s) 724
AjnI CCWGG 4 cut(s) 315, 331, 733, 855
AluBI AGCT 5 cut(s) 58, 242, 322, 499, 898
AluI AGCT 5 cut(s) 58, 242, 322, 499, 898
Alw21I GWGCWC 2 cut(s) 324, 501
Alw26I GTCTC 2 cut(s) 105, 346
Ama87I CYCGRG 1 cut(s) 817
AoxI GGCC 1 cut(s) 366
ApeKI GCWGC 2 cut(s) 710, 784
ApoI RAATTY 2 cut(s) 506, 740
AspLEI GCGC 3 cut(s) 249, 350, 945
AspS9I GGNCC 3 cut(s) 398, 796, 814
AsuC2I CCSGG 1 cut(s) 922
AsuHPI GGTGA 4 cut(s) 52, 290, 316, 949
AvaI CYCGRG 1 cut(s) 817
AvaII GGWCC 3 cut(s) 398, 796, 814
BanII GRGCYC 2 cut(s) 324, 501
BauI CACGAG 1 cut(s) 343
BbrPI CACGTG 1 cut(s) 374
Bbv12I GWGCWC 2 cut(s) 324, 501
BbvI GCAGC 2 cut(s) 697, 771
BccI CCATC 4 cut(s) 237, 275, 382, 425
BceAI ACGGC 1 cut(s) 220
BciT130I CCWGG 4 cut(s) 317, 333, 735, 857
BcnI CCSGG 1 cut(s) 922
BcoDI GTCTC 2 cut(s) 105, 346
BfaI CTAG 2 cut(s) 272, 519
BfuAI ACCTGC 3 cut(s) 266, 335, 936
BisI GCNGC 5 cut(s) 135, 153, 516, 711, 785
BlpI GCTNAGC 1 cut(s) 243
BlsI GCNGC 5 cut(s) 136, 154, 517, 712, 786
Bme1390I CCNGG 5 cut(s) 317, 333, 735, 857, 922
Bme18I GGWCC 3 cut(s) 398, 796, 814
BmeRI GACNNNNNGTC 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 817
BmgBI CACGTC 1 cut(s) 724
BmgT120I GGNCC 3 cut(s) 398, 796, 814
BmiI GGNNCC 2 cut(s) 208, 816
BmrFI CCNGG 5 cut(s) 317, 333, 735, 857, 922
BmsI GCATC 3 cut(s) 241, 800, 934
BplI GAGNNNNNCTC 2 cut(s) 830, 862
BpmI CTGGAG 1 cut(s) 338
Bpu1102I GCTNAGC 1 cut(s) 243
BpuMI CCSGG 1 cut(s) 922
BsaAI YACGTR 1 cut(s) 374
BsaJI CCNNGG 7 cut(s) 315, 331, 332, 453, 489, 705, 818
Bsc4I CCNNNNNNNGG 3 cut(s) 333, 490, 706
Bse1I ACTGG 1 cut(s) 559
Bse3DI GCAATG 3 cut(s) 216, 580, 894
BseBI CCWGG 4 cut(s) 317, 333, 735, 857
BseDI CCNNGG 7 cut(s) 315, 331, 332, 453, 489, 705, 818
BseGI GGATG 1 cut(s) 499
BseLI CCNNNNNNNGG 3 cut(s) 333, 490, 706
BseMI GCAATG 3 cut(s) 216, 580, 894
BseMII CTCAG 2 cut(s) 234, 246
BseNI ACTGG 1 cut(s) 559
BseXI GCAGC 2 cut(s) 697, 771
Bsh1236I CGCG 4 cut(s) 119, 249, 362, 956
BshFI GGCC 1 cut(s) 368
BsiHKAI GWGCWC 2 cut(s) 324, 501
BsiHKCI CYCGRG 1 cut(s) 817
BsiSI CCGG 1 cut(s) 921
BslFI GGGAC 2 cut(s) 106, 435
BslI CCNNNNNNNGG 3 cut(s) 333, 490, 706
BsmAI GTCTC 2 cut(s) 105, 346
BsmFI GGGAC 2 cut(s) 106, 435
BsnI GGCC 1 cut(s) 368
BsoBI CYCGRG 1 cut(s) 817
Bsp1286I GDGCHC 2 cut(s) 324, 501
Bsp143I GATC 1 cut(s) 258
Bsp1720I GCTNAGC 1 cut(s) 243
Bsp19I CCATGG 1 cut(s) 705
BspANI GGCC 1 cut(s) 368
BspCNI CTCAG 2 cut(s) 235, 247
BspFNI CGCG 4 cut(s) 119, 249, 362, 956
BspHI TCATGA 1 cut(s) 907
BspLI GGNNCC 2 cut(s) 208, 816
BspMI ACCTGC 3 cut(s) 266, 335, 936
BsrDI GCAATG 3 cut(s) 216, 580, 894
BsrI ACTGG 1 cut(s) 559
BssECI CCNNGG 7 cut(s) 315, 331, 332, 453, 489, 705, 818
BssMI GATC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 343
BssT1I CCWWGG 2 cut(s) 453, 705
Bst2BI CACGAG 1 cut(s) 343
Bst2UI CCWGG 4 cut(s) 317, 333, 735, 857
Bst4CI ACNGT 1 cut(s) 490
Bst6I CTCTTC 2 cut(s) 32, 176
BstBAI YACGTR 1 cut(s) 374
BstC8I GCNNGC 3 cut(s) 132, 157, 789
BstDEI CTNAG 5 cut(s) 187, 243, 255, 810, 975
BstDSI CCRYGG 2 cut(s) 489, 705
BstF5I GGATG 1 cut(s) 499
BstFNI CGCG 4 cut(s) 119, 249, 362, 956
BstHHI GCGC 3 cut(s) 249, 350, 945
BstKTI GATC 1 cut(s) 261
BstMAI GTCTC 2 cut(s) 105, 346
BstMBI GATC 1 cut(s) 258
BstMWI GCNNNNNNNGC 3 cut(s) 165, 311, 710
BstNI CCWGG 4 cut(s) 317, 333, 735, 857
BstNSI RCATGY 2 cut(s) 681, 754
BstSCI CCNGG 5 cut(s) 315, 331, 733, 855, 920
BstUI CGCG 4 cut(s) 119, 249, 362, 956
BstV1I GCAGC 2 cut(s) 697, 771
BsuRI GGCC 1 cut(s) 368
BtgI CCRYGG 2 cut(s) 489, 705
BtgZI GCGATG 1 cut(s) 264
BtrI CACGTC 1 cut(s) 724
BtsCI GGATG 1 cut(s) 499
BtsIMutI CAGTG 1 cut(s) 594
BveI ACCTGC 3 cut(s) 266, 335, 936
Cac8I GCNNGC 3 cut(s) 132, 157, 789
CciI TCATGA 1 cut(s) 907
CfoI GCGC 3 cut(s) 249, 350, 945
Cfr13I GGNCC 3 cut(s) 398, 796, 814
CseI GACGC 3 cut(s) 108, 438, 962
Csp6I GTAC 2 cut(s) 754, 844
CviAII CATG 6 cut(s) 678, 706, 751, 800, 884, 908
CviQI GTAC 2 cut(s) 754, 844
DdeI CTNAG 5 cut(s) 187, 243, 255, 810, 975
DpnI GATC 1 cut(s) 260
DpnII GATC 1 cut(s) 258
DrdI GACNNNNNNGTC 1 cut(s) 209
DriI GACNNNNNGTC 1 cut(s) 118
DseDI GACNNNNNNGTC 1 cut(s) 209
Eam1104I CTCTTC 2 cut(s) 32, 176
Eam1105I GACNNNNNGTC 1 cut(s) 118
EarI CTCTTC 2 cut(s) 32, 176
EciI GGCGGA 2 cut(s) 155, 875
Ecl136II GAGCTC 2 cut(s) 322, 499
Eco130I CCWWGG 2 cut(s) 453, 705
Eco24I GRGCYC 2 cut(s) 324, 501
Eco47I GGWCC 3 cut(s) 398, 796, 814
Eco53kI GAGCTC 2 cut(s) 322, 499
Eco57I CTGAAG 1 cut(s) 953
Eco72I CACGTG 1 cut(s) 374
Eco88I CYCGRG 1 cut(s) 817
EcoICRI GAGCTC 2 cut(s) 322, 499
EcoO109I RGGNCCY 1 cut(s) 814
EcoRII CCWGG 4 cut(s) 315, 331, 733, 855
EcoT14I CCWWGG 2 cut(s) 453, 705
EcoT38I GRGCYC 2 cut(s) 324, 501
ErhI CCWWGG 2 cut(s) 453, 705
FaeI CATG 6 cut(s) 681, 709, 754, 803, 887, 911
FaiI YATR 7 cut(s) 14, 679, 707, 752, 801, 885, 909
FalI AAGNNNNNCTT 2 cut(s) 761, 793
FaqI GGGAC 2 cut(s) 106, 435
FatI CATG 6 cut(s) 677, 705, 750, 799, 883, 907
FauI CCCGC 1 cut(s) 709
Fnu4HI GCNGC 5 cut(s) 135, 153, 516, 711, 785
FokI GGATG 1 cut(s) 506
FriOI GRGCYC 2 cut(s) 324, 501
Fsp4HI GCNGC 5 cut(s) 135, 153, 516, 711, 785
FspBI CTAG 2 cut(s) 272, 519
FspI TGCGCA 1 cut(s) 349
GlaI GCGC 3 cut(s) 248, 349, 944
GluI GCNGC 5 cut(s) 135, 153, 516, 711, 785
GsuI CTGGAG 1 cut(s) 338
HaeIII GGCC 1 cut(s) 368
HapII CCGG 1 cut(s) 921
HgaI GACGC 3 cut(s) 108, 438, 962
HhaI GCGC 3 cut(s) 249, 350, 945
Hin1II CATG 6 cut(s) 681, 709, 754, 803, 887, 911
Hin6I GCGC 3 cut(s) 247, 348, 943
HinP1I GCGC 3 cut(s) 247, 348, 943
HindIII AAGCTT 1 cut(s) 896
HinfI GANTC 3 cut(s) 50, 266, 763
HpaII CCGG 1 cut(s) 921
HphI GGTGA 4 cut(s) 52, 290, 316, 949
Hpy166II GTNNAC 4 cut(s) 178, 398, 560, 594
Hpy188I TCNGA 5 cut(s) 49, 99, 110, 762, 796
Hpy188III TCNNGA 3 cut(s) 89, 385, 908
Hpy8I GTNNAC 4 cut(s) 178, 398, 560, 594
Hpy99I CGWCG 2 cut(s) 725, 956
HpyAV CCTTC 3 cut(s) 52, 656, 724
HpyCH4III ACNGT 1 cut(s) 490
HpyCH4IV ACGT 2 cut(s) 373, 723
HpyCH4V TGCA 3 cut(s) 585, 803, 887
HpyF10VI GCNNNNNNNGC 3 cut(s) 165, 311, 710
HpyF3I CTNAG 5 cut(s) 187, 243, 255, 810, 975
HpySE526I ACGT 2 cut(s) 373, 723
Hsp92II CATG 6 cut(s) 681, 709, 754, 803, 887, 911
HspAI GCGC 3 cut(s) 247, 348, 943
Kzo9I GATC 1 cut(s) 258
LmnI GCTCC 2 cut(s) 212, 319
Lsp1109I GCAGC 2 cut(s) 697, 771
LweI GCATC 3 cut(s) 241, 800, 934
MaeI CTAG 2 cut(s) 272, 519
MaeII ACGT 2 cut(s) 373, 723
MaeIII GTNAC 4 cut(s) 200, 374, 382, 683
MalI GATC 1 cut(s) 260
MboI GATC 1 cut(s) 258
MboII GAAGA 9 cut(s) 11, 14, 19, 22, 112, 163, 502, 548, 682
MfeI CAATTG 2 cut(s) 531, 567
MhlI GDGCHC 2 cut(s) 324, 501
MluCI AATT 4 cut(s) 506, 531, 567, 740
MluI ACGCGT 1 cut(s) 954
MmeI TCCRAC 2 cut(s) 249, 653
MseI TTAA 3 cut(s) 551, 915, 960
MspI CCGG 1 cut(s) 921
MspR9I CCNGG 5 cut(s) 317, 333, 735, 857, 922
MunI CAATTG 2 cut(s) 531, 567
MvaI CCWGG 4 cut(s) 317, 333, 735, 857
MvnI CGCG 4 cut(s) 119, 249, 362, 956
MwoI GCNNNNNNNGC 3 cut(s) 165, 311, 710
NciI CCSGG 1 cut(s) 922
NcoI CCATGG 1 cut(s) 705
NdeII GATC 1 cut(s) 258
NlaIII CATG 6 cut(s) 681, 709, 754, 803, 887, 911
NlaIV GGNNCC 2 cut(s) 208, 816
NmuCI GTSAC 3 cut(s) 200, 374, 382
NsbI TGCGCA 1 cut(s) 349
NspI RCATGY 2 cut(s) 681, 754
PagI TCATGA 1 cut(s) 907
PaqCI CACCTGC 3 cut(s) 266, 335, 936
PasI CCCWGGG 1 cut(s) 332
PciI ACATGT 1 cut(s) 750
PfeI GAWTC 3 cut(s) 50, 266, 763
PflFI GACNNNGTC 1 cut(s) 380
PflMI CCANNNNNTGG 1 cut(s) 490
PkrI GCNGC 5 cut(s) 136, 154, 517, 712, 786
PmaCI CACGTG 1 cut(s) 374
PmlI CACGTG 1 cut(s) 374
Ppu21I YACGTR 1 cut(s) 374
PpuMI RGGWCCY 1 cut(s) 814
PscI ACATGT 1 cut(s) 750
Psp124BI GAGCTC 2 cut(s) 324, 501
Psp5II RGGWCCY 1 cut(s) 814
Psp6I CCWGG 4 cut(s) 315, 331, 733, 855
PspCI CACGTG 1 cut(s) 374
PspGI CCWGG 4 cut(s) 315, 331, 733, 855
PspN4I GGNNCC 2 cut(s) 208, 816
PspPI GGNCC 3 cut(s) 398, 796, 814
PspPPI RGGWCCY 1 cut(s) 814
PsyI GACNNNGTC 1 cut(s) 380
RsaI GTAC 2 cut(s) 755, 845
RsaNI GTAC 2 cut(s) 754, 844
SacI GAGCTC 2 cut(s) 324, 501
SaqAI TTAA 3 cut(s) 551, 915, 960
SatI GCNGC 5 cut(s) 135, 153, 516, 711, 785
Sau3AI GATC 1 cut(s) 258
Sau96I GGNCC 3 cut(s) 398, 796, 814
ScrFI CCNGG 5 cut(s) 317, 333, 735, 857, 922
SduI GDGCHC 2 cut(s) 324, 501
SfaNI GCATC 3 cut(s) 241, 800, 934
SinI GGWCC 3 cut(s) 398, 796, 814
Sse9I AATT 4 cut(s) 506, 531, 567, 740
SspMI CTAG 2 cut(s) 272, 519
SstI GAGCTC 2 cut(s) 324, 501
StyD4I CCNGG 5 cut(s) 315, 331, 733, 855, 920
StyI CCWWGG 2 cut(s) 453, 705
TaaI ACNGT 1 cut(s) 490
TaiI ACGT 2 cut(s) 376, 726
TaqI TCGA 2 cut(s) 53, 744
TasI AATT 4 cut(s) 506, 531, 567, 740
TatI WGTACW 2 cut(s) 753, 843
TauI GCSGC 3 cut(s) 137, 155, 518
TfiI GAWTC 3 cut(s) 50, 266, 763
Tru1I TTAA 3 cut(s) 551, 915, 960
Tru9I TTAA 3 cut(s) 551, 915, 960
TscAI CASTG 1 cut(s) 601
TseFI GTSAC 3 cut(s) 200, 374, 382
TseI GCWGC 2 cut(s) 710, 784
Tsp45I GTSAC 3 cut(s) 200, 374, 382
TspGWI ACGGA 3 cut(s) 199, 290, 400
TspRI CASTG 1 cut(s) 601
Tth111I GACNNNGTC 1 cut(s) 380
Van91I CCANNNNNTGG 1 cut(s) 490
VpaK11BI GGWCC 3 cut(s) 398, 796, 814
XapI RAATTY 2 cut(s) 506, 740
XceI RCATGY 2 cut(s) 681, 754
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XspI CTAG 2 cut(s) 272, 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.