Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005088

Physical Location & Seq

Genomic Coordinates Forward (+)

18258818 .. 18263384

Gene Structure 4567 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGATTGTCTCCAATGCTTTTTTTCCGTTTGGAAAATTAACGAAACCAGCATGCGCCGTAGCAATTTTGCCTCCAACCCGCTCTTCTTCTGCTCCAGAGCAACACAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAGGAATGGCTTCGCCGACCGAAACTCCATCGGCGAACATCTACATATCGCCGGAGTGGTCCGAGGCAGTAGACTGTATAGCGTACGATTCAGTCACTTCGCGGCCTCCCATTGCCTTAGTATGCGGTGCCAAAAACTGCGGAAAATCCACCTTTTCCCGCCACCTCCTCAACATTCTTCTCCGGAGGTATAAAAAAGTTGGTTACTTGGATACAGATGTTGGTCAACCTGAGTTCAGTCCTCCTGGTTTTTTGTCTCTCACTGTAGTAGATGAAGTCACTCCAGATTTGACAATCCCGCATCTGAAGACACCGAAGAGATGTCTTTTCTTTGGTGATGTTTCTTCGAAGACGAATCCTACAACATACTTGAATTCTATATTCGCTTTATATGATTATTATAAGAAGGAATACTGCTTGTTTAACCAGAGTGATAGACCTACCAAGAAGATCGGATTGCCTCTTGTTGTGAATACACCTGGCTGGGTGAAAGGTGTTGGTTATGATATATTGGTGGATATGTTGAGGTATATTGCCCCTACCCATGTTGTTAAAATAAACATATCGGCCGAGAGTAAGAATCTACCAAGTGGGGTATTCTGGTTAGATGAGGATCATGACGCTATGCTCAAGCTGATAGAGATCAATTCAGCTCGTCAGGACTCTTTCAATAGATCGATTCTAGTACAAAAGGATGCACACCTGTTGCGTGATGTACGAATAATGGCTTATTTCAGGCAGTGCTTTTCAAGTGGCCTGAACATTACTACAATCAAAGAACTTGCTAATGCTTTGGCCTCTCAACCTCCTTATGAAGTTCCAATATCTAGCATTAAGATTAGACATCTCCATTGTCAGGTCCCAGGTGCTGAGATCTTCTACAGTTTGAACGCAACCATTGTTGGGTTGGCAGTTAGCTCTGAAGGATCAAAGGATTTACCTTGGTGTGTTGGTCTTGGAATTGTGAGAGGCATTGACACTTTCAAAGGCTTGCTATATGTGATAACACCGGTTCCAAGAGGCACTCTGGAGAAGGTCGATCTATTTCTGCAAGGTTATATCCAAATTCCTACGGTGTTGTTGCAGGTCCAGGGATGCATATCGCCTTATATGTCTGCGAATGTTCTGTCTACAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000448 GO:0000460 GO:0000463 GO:0000466 GO:0000469 GO:0000470 GO:0000478 GO:0000479 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019205 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0051731 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLP1_P

Protein Analysis

430

Amino Acids

47.77

Weight (kDa)

8.55

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CLP1_P	PF16575	93 - 295	3.7e-35	mRNA cleavage and polyadenylation factor CLP1 P-loop
NOL9_C	PF25467	317 - 407	7.3e-32	NOL9-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11010 AT5G11010 AT5G11010 AT5G11010
fragaria_vesca	FvH4_5g16020 FvH4_5g16020 FvH4_5g16020 FvH4_5g16020
malus_domestica	MD06G1183600.v1.1 MD14G1057100.v1.1 MD14G1189700.v1.1
prunus_persica	Prupe.5G161200_v2.0.a1 Prupe.5G182300_v2.0.a1 Prupe.5G182300_v2.0.a1
pyrus_communis	pycom06g16270 pycom14g15720
rosa_chinensis	RchiOBHm_Chr7g0180051
rosa_laevigata	RLG00000005299
rosa_multiflora	Rmu_co8044072.1_g000001 Rmu_sc0002219.1_g000023 Rmu_sc0017616.1_g000001 Rmu_ssc0000119.1_g000025
rosa_roxburghii	Rroxscaffold_3G00273170
rosa_rugosa	Rorug06G0430200 Rorug06G0430200
rosa_samantha	Rh7AG030400 Rh7BG030300 Rh7CG032100 Rh7DG031100
rosa_wichuraiana	Rw7G002530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	552
Acc36I	ACCTGC	1 cut(s)	1225
AccB1I	GGYRCC	1 cut(s)	278
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	2 cut(s)	222, 1280
AccII	CGCG	1 cut(s)	253
AccIII	TCCGGA	1 cut(s)	333
AciI	CCGC	6 cut(s)	79, 253, 276, 291, 310, 449
AclWI	GGATC	2 cut(s)	771, 1084
AcoI	YGGCCR	1 cut(s)	717
AcsI	RAATTY	2 cut(s)	523, 1215
AcuI	CTGAAG	2 cut(s)	476, 1092
AfaI	GTAC	3 cut(s)	236, 837, 867
AfiI	CCNNNNNNNGG	2 cut(s)	1006, 1053
AgeI	ACCGGT	1 cut(s)	1159
AgsI	TTSAA	5 cut(s)	523, 820, 900, 1039, 1135
AjnI	CCWGG	4 cut(s)	394, 628, 1012, 1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	67, 99
AluBI	AGCT	4 cut(s)	784, 803, 1068, 1287
AluI	AGCT	4 cut(s)	784, 803, 1068, 1287
Alw26I	GTCTC	2 cut(s)	13, 411
AlwI	GGATC	2 cut(s)	771, 1084
AlwNI	CAGNNNCTG	1 cut(s)	1019
Aor13HI	TCCGGA	1 cut(s)	333
AoxI	GGCC	4 cut(s)	254, 717, 904, 945
ApoI	RAATTY	2 cut(s)	523, 1215
ArsI	GACNNNNNNTTYG	1 cut(s)	1262
AsiGI	ACCGGT	1 cut(s)	1159
Asp700I	GAANNNNTTC	1 cut(s)	160
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	3 cut(s)	210, 1009, 1237
AsuHPI	GGTGA	2 cut(s)	497, 649
AsuII	TTCGAA	1 cut(s)	497
AvaII	GGWCC	3 cut(s)	210, 1009, 1237
BaeI	ACNNNNGTAYC	2 cut(s)	354, 387
BanI	GGYRCC	1 cut(s)	278
BbsI	GAAGAC	2 cut(s)	464, 506
BccI	CCATC	1 cut(s)	187
BceAI	ACGGC	1 cut(s)	41
BciT130I	CCWGG	4 cut(s)	396, 630, 1014, 1241
BciVI	GTATCC	1 cut(s)	355
BcoDI	GTCTC	2 cut(s)	13, 411
BfaI	CTAG	2 cut(s)	833, 978
BfmI	CTRYAG	2 cut(s)	414, 1030
BfuAI	ACCTGC	1 cut(s)	1225
BfuI	GTATCC	1 cut(s)	355
BglII	AGATCT	1 cut(s)	1023
BisI	GCNGC	1 cut(s)	254
BlsI	GCNGC	1 cut(s)	255
Bme1390I	CCNGG	4 cut(s)	396, 630, 1014, 1241
Bme18I	GGWCC	3 cut(s)	210, 1009, 1237
BmgT120I	GGNCC	3 cut(s)	210, 1009, 1237
BmiI	GGNNCC	3 cut(s)	280, 1011, 1164
BmrFI	CCNGG	4 cut(s)	396, 630, 1014, 1241
BmsI	GCATC	3 cut(s)	460, 835, 1235
BpiI	GAAGAC	2 cut(s)	464, 506
BpmI	CTGGAG	3 cut(s)	78, 417, 1199
Bpu14I	TTCGAA	1 cut(s)	497
BpuEI	CTTGAG	1 cut(s)	764
Bsa29I	ATCGAT	1 cut(s)	827
BsaBI	GATNNNNATC	3 cut(s)	762, 791, 1249
BsaJI	CCNNGG	4 cut(s)	213, 1012, 1091, 1240
BsaWI	WCCGGW	2 cut(s)	333, 1159
BsaXI	ACNNNNNCTCC	2 cut(s)	160, 190
Bsc4I	CCNNNNNNNGG	2 cut(s)	1006, 1053
Bse118I	RCCGGY	1 cut(s)	1159
Bse3DI	GCAATG	1 cut(s)	261
Bse8I	GATNNNNATC	3 cut(s)	762, 791, 1249
BseAI	TCCGGA	1 cut(s)	333
BseBI	CCWGG	4 cut(s)	396, 630, 1014, 1241
BseCI	ATCGAT	1 cut(s)	827
BseDI	CCNNGG	4 cut(s)	213, 1012, 1091, 1240
BseGI	GGATG	2 cut(s)	850, 1250
BseJI	GATNNNNATC	3 cut(s)	762, 791, 1249
BseLI	CCNNNNNNNGG	2 cut(s)	1006, 1053
BseMI	GCAATG	1 cut(s)	261
BseMII	CTCAG	2 cut(s)	372, 1011
BseRI	GAGGAG	1 cut(s)	308
BseX3I	CGGCCG	1 cut(s)	717
BseYI	CCCAGC	1 cut(s)	633
Bsh1236I	CGCG	1 cut(s)	253
Bsh1285I	CGRYCG	2 cut(s)	171, 720
BshFI	GGCC	4 cut(s)	256, 719, 906, 947
BshNI	GGYRCC	1 cut(s)	278
BshTI	ACCGGT	1 cut(s)	1159
BshVI	ATCGAT	1 cut(s)	827
BsiEI	CGRYCG	2 cut(s)	171, 720
BsiSI	CCGG	3 cut(s)	203, 334, 1160
BsiWI	CGTACG	1 cut(s)	234
BslFI	GGGAC	1 cut(s)	995
BslI	CCNNNNNNNGG	2 cut(s)	1006, 1053
BsmAI	GTCTC	2 cut(s)	13, 411
BsmFI	GGGAC	1 cut(s)	995
BsnI	GGCC	4 cut(s)	256, 719, 906, 947
Bsp119I	TTCGAA	1 cut(s)	497
Bsp13I	TCCGGA	1 cut(s)	333
Bsp143I	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
BspACI	CCGC	6 cut(s)	79, 253, 276, 291, 310, 449
BspANI	GGCC	4 cut(s)	256, 719, 906, 947
BspCNI	CTCAG	2 cut(s)	373, 1012
BspDI	ATCGAT	1 cut(s)	827
BspEI	TCCGGA	1 cut(s)	333
BspFNI	CGCG	1 cut(s)	253
BspHI	TCATGA	1 cut(s)	766
BspLI	GGNNCC	3 cut(s)	280, 1011, 1164
BspMI	ACCTGC	1 cut(s)	1225
BspPI	GGATC	2 cut(s)	771, 1084
BspQI	GCTCTTC	1 cut(s)	88
BspT104I	TTCGAA	1 cut(s)	497
BspT107I	GGYRCC	1 cut(s)	278
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	261
BsrFI	RCCGGY	1 cut(s)	1159
BssAI	RCCGGY	1 cut(s)	1159
BssECI	CCNNGG	4 cut(s)	213, 1012, 1091, 1240
BssMI	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
BssT1I	CCWWGG	1 cut(s)	1091
Bst2UI	CCWGG	4 cut(s)	396, 630, 1014, 1241
Bst4CI	ACNGT	5 cut(s)	107, 227, 415, 1034, 1225
Bst6I	CTCTTC	2 cut(s)	88, 461
BstBI	TTCGAA	1 cut(s)	497
BstC8I	GCNNGC	2 cut(s)	52, 1142
BstDEI	CTNAG	3 cut(s)	268, 381, 1020
BstF5I	GGATG	2 cut(s)	850, 1250
BstFNI	CGCG	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	7 cut(s)	603, 766, 795, 827, 1026, 1079, 1192
BstMAI	GTCTC	2 cut(s)	13, 411
BstMBI	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
BstMCI	CGRYCG	2 cut(s)	171, 720
BstNI	CCWGG	4 cut(s)	396, 630, 1014, 1241
BstNSI	RCATGY	1 cut(s)	54
BstSCI	CCNGG	4 cut(s)	394, 628, 1012, 1239
BstSFI	CTRYAG	2 cut(s)	414, 1030
BstUI	CGCG	1 cut(s)	253
BstV2I	GAAGAC	2 cut(s)	464, 506
BstX2I	RGATCY	1 cut(s)	1023
BstYI	RGATCY	1 cut(s)	1023
BstZI	CGGCCG	1 cut(s)	717
Bsu15I	ATCGAT	1 cut(s)	827
BsuI	GTATCC	1 cut(s)	355
BsuRI	GGCC	4 cut(s)	256, 719, 906, 947
BsuTUI	ATCGAT	1 cut(s)	827
BtsCI	GGATG	2 cut(s)	850, 1250
BtsI	GCAGTG	1 cut(s)	896
BtsIMutI	CAGTG	2 cut(s)	411, 896
BveI	ACCTGC	1 cut(s)	1225
Cac8I	GCNNGC	2 cut(s)	52, 1142
CaiI	CAGNNNCTG	1 cut(s)	1019
CciI	TCATGA	1 cut(s)	766
CfoI	GCGC	1 cut(s)	56
Cfr10I	RCCGGY	1 cut(s)	1159
Cfr13I	GGNCC	3 cut(s)	210, 1009, 1237
ClaI	ATCGAT	1 cut(s)	827
CseI	GACGC	1 cut(s)	779
Csp6I	GTAC	3 cut(s)	235, 836, 866
CspAI	ACCGGT	1 cut(s)	1159
CviAII	CATG	3 cut(s)	51, 695, 767
CviQI	GTAC	3 cut(s)	235, 836, 866
DdeI	CTNAG	3 cut(s)	268, 381, 1020
DpnI	GATC	7 cut(s)	602, 765, 794, 826, 1025, 1078, 1191
DpnII	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
EaeI	YGGCCR	1 cut(s)	717
EagI	CGGCCG	1 cut(s)	717
Eam1104I	CTCTTC	2 cut(s)	88, 461
EarI	CTCTTC	2 cut(s)	88, 461
EclXI	CGGCCG	1 cut(s)	717
Eco130I	CCWWGG	1 cut(s)	1091
Eco47I	GGWCC	3 cut(s)	210, 1009, 1237
Eco52I	CGGCCG	1 cut(s)	717
Eco57I	CTGAAG	2 cut(s)	476, 1092
EcoO109I	RGGNCCY	1 cut(s)	1009
EcoRI	GAATTC	1 cut(s)	523
EcoRII	CCWGG	4 cut(s)	394, 628, 1012, 1239
EcoT14I	CCWWGG	1 cut(s)	1091
EcoT22I	ATGCAT	1 cut(s)	1250
ErhI	CCWWGG	1 cut(s)	1091
FaeI	CATG	3 cut(s)	54, 698, 770
FaqI	GGGAC	1 cut(s)	995
FatI	CATG	3 cut(s)	50, 694, 766
FauI	CCCGC	3 cut(s)	86, 317, 456
FblI	GTMKAC	2 cut(s)	222, 1280
Fnu4HI	GCNGC	1 cut(s)	254
FokI	GGATG	2 cut(s)	857, 1257
Fsp4HI	GCNGC	1 cut(s)	254
FspBI	CTAG	2 cut(s)	833, 978
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	1 cut(s)	254
GsaI	CCCAGC	1 cut(s)	637
GsuI	CTGGAG	3 cut(s)	78, 417, 1199
HaeIII	GGCC	4 cut(s)	256, 719, 906, 947
HapII	CCGG	3 cut(s)	203, 334, 1160
HgaI	GACGC	1 cut(s)	779
HhaI	GCGC	1 cut(s)	56
Hin1II	CATG	3 cut(s)	54, 698, 770
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	1 cut(s)	377
HindII	GTYRAC	1 cut(s)	377
HinfI	GANTC	5 cut(s)	239, 505, 730, 812, 829
HpaII	CCGG	3 cut(s)	203, 334, 1160
HphI	GGTGA	2 cut(s)	497, 649
Hpy166II	GTNNAC	3 cut(s)	223, 377, 1281
Hpy188I	TCNGA	4 cut(s)	214, 456, 605, 1072
Hpy188III	TCNNGA	6 cut(s)	95, 334, 434, 767, 809, 1178
Hpy8I	GTNNAC	3 cut(s)	223, 377, 1281
HpyAV	CCTTC	3 cut(s)	550, 1067, 1177
HpyCH4III	ACNGT	5 cut(s)	107, 227, 415, 1034, 1225
HpyCH4V	TGCA	4 cut(s)	848, 1201, 1234, 1248
HpyF3I	CTNAG	3 cut(s)	268, 381, 1020
Hsp92II	CATG	3 cut(s)	54, 698, 770
HspAI	GCGC	1 cut(s)	54
Kpn2I	TCCGGA	1 cut(s)	333
Kzo9I	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
LguI	GCTCTTC	1 cut(s)	88
LmnI	GCTCC	1 cut(s)	97
LweI	GCATC	3 cut(s)	460, 835, 1235
MaeI	CTAG	2 cut(s)	833, 978
MaeIII	GTNAC	3 cut(s)	244, 353, 427
MalI	GATC	7 cut(s)	602, 765, 794, 826, 1025, 1078, 1191
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
MboII	GAAGA	9 cut(s)	75, 78, 320, 469, 478, 486, 511, 610, 1018
MflI	RGATCY	1 cut(s)	1023
MluCI	AATT	6 cut(s)	35, 63, 523, 796, 1110, 1215
MlyI	GAGTC	1 cut(s)	806
MmeI	TCCRAC	1 cut(s)	98
Mph1103I	ATGCAT	1 cut(s)	1250
MroI	TCCGGA	1 cut(s)	333
MroXI	GAANNNNTTC	1 cut(s)	160
MseI	TTAA	4 cut(s)	38, 573, 702, 984
MspI	CCGG	3 cut(s)	203, 334, 1160
MspR9I	CCNGG	4 cut(s)	396, 630, 1014, 1241
MvaI	CCWGG	4 cut(s)	396, 630, 1014, 1241
MvnI	CGCG	1 cut(s)	253
NdeII	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
NlaIII	CATG	3 cut(s)	54, 698, 770
NlaIV	GGNNCC	3 cut(s)	280, 1011, 1164
NmeAIII	GCCGAG	1 cut(s)	745
NmuCI	GTSAC	2 cut(s)	244, 427
NsiI	ATGCAT	1 cut(s)	1250
NspI	RCATGY	1 cut(s)	54
NspV	TTCGAA	1 cut(s)	497
PaeI	GCATGC	1 cut(s)	54
PagI	TCATGA	1 cut(s)	766
PciSI	GCTCTTC	1 cut(s)	88
PdmI	GAANNNNTTC	1 cut(s)	160
PfeI	GAWTC	4 cut(s)	239, 505, 730, 829
Pfl23II	CGTACG	1 cut(s)	234
PinAI	ACCGGT	1 cut(s)	1159
PkrI	GCNGC	1 cut(s)	255
PleI	GAGTC	1 cut(s)	806
PpsI	GAGTC	1 cut(s)	806
PpuMI	RGGWCCY	1 cut(s)	1009
PsiI	TTATAA	1 cut(s)	552
Psp5II	RGGWCCY	1 cut(s)	1009
Psp6I	CCWGG	4 cut(s)	394, 628, 1012, 1239
PspFI	CCCAGC	1 cut(s)	633
PspGI	CCWGG	4 cut(s)	394, 628, 1012, 1239
PspLI	CGTACG	1 cut(s)	234
PspN4I	GGNNCC	3 cut(s)	280, 1011, 1164
PspPI	GGNCC	3 cut(s)	210, 1009, 1237
PspPPI	RGGWCCY	1 cut(s)	1009
PstNI	CAGNNNCTG	1 cut(s)	1019
PsuI	RGATCY	1 cut(s)	1023
RsaI	GTAC	3 cut(s)	236, 837, 867
RsaNI	GTAC	3 cut(s)	235, 836, 866
SapI	GCTCTTC	1 cut(s)	88
SaqAI	TTAA	4 cut(s)	38, 573, 702, 984
SatI	GCNGC	1 cut(s)	254
Sau3AI	GATC	7 cut(s)	600, 763, 792, 824, 1023, 1076, 1189
Sau96I	GGNCC	3 cut(s)	210, 1009, 1237
SchI	GAGTC	1 cut(s)	806
ScrFI	CCNGG	4 cut(s)	396, 630, 1014, 1241
SfaNI	GCATC	3 cut(s)	460, 835, 1235
SfcI	CTRYAG	2 cut(s)	414, 1030
SfuI	TTCGAA	1 cut(s)	497
SinI	GGWCC	3 cut(s)	210, 1009, 1237
SmlI	CTYRAG	1 cut(s)	779
SmoI	CTYRAG	1 cut(s)	779
SphI	GCATGC	1 cut(s)	54
Sse9I	AATT	6 cut(s)	35, 63, 523, 796, 1110, 1215
SsiI	CCGC	6 cut(s)	79, 253, 276, 291, 310, 449
SspMI	CTAG	2 cut(s)	833, 978
StyD4I	CCNGG	4 cut(s)	394, 628, 1012, 1239
StyI	CCWWGG	1 cut(s)	1091
TaaI	ACNGT	5 cut(s)	107, 227, 415, 1034, 1225
TaqI	TCGA	3 cut(s)	497, 827, 1188
TaqII	GACCGA	1 cut(s)	185
TasI	AATT	6 cut(s)	35, 63, 523, 796, 1110, 1215
TatI	WGTACW	1 cut(s)	835
TauI	GCSGC	1 cut(s)	256
TfiI	GAWTC	4 cut(s)	239, 505, 730, 829
Tru1I	TTAA	4 cut(s)	38, 573, 702, 984
Tru9I	TTAA	4 cut(s)	38, 573, 702, 984
TscAI	CASTG	2 cut(s)	418, 896
TseFI	GTSAC	2 cut(s)	244, 427
Tsp45I	GTSAC	2 cut(s)	244, 427
TspDTI	ATGAA	2 cut(s)	438, 978
TspGWI	ACGGA	1 cut(s)	15
TspRI	CASTG	2 cut(s)	418, 896
VpaK11BI	GGWCC	3 cut(s)	210, 1009, 1237
XapI	RAATTY	2 cut(s)	523, 1215
XceI	RCATGY	1 cut(s)	54
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1054
XmiI	GTMKAC	2 cut(s)	222, 1280
XmnI	GAANNNNTTC	1 cut(s)	160
XspI	CTAG	2 cut(s)	833, 978
Zsp2I	ATGCAT	1 cut(s)	1250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.