Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Reverse (-)

21017884 .. 21020214

Gene Structure 2331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGCGATTCTACCCTTCTCTCTTAACAAAATCCCAATCGTCTTCTTCCTCTCCATCTTCTCCAAAATTCTGTGAGTATTTGGCAACAGCAATGAATTTTGCAGCTCGAAAGCTCCTCTTTTCTCTCCTGATTTTCTCTCTCTTCCCCCTCTCTCTCTGCGTCCGTCCCTTCATCCTCGTTCTCTCGCAAGATGATCTCCTAAACACCCCTACCTCGCCCGACCACTCGCCGCCCGCCGCCGACTCAGCTCCAAATGAGTCGCAGGACTGGGACGAGTTTGGCGACTCCGACGCCGCGCAGTCAGAGGAGGAGCTCGACCCGGGATCCTGGCGCCCAATCTTCGAACCCGACCCCTTTAAGGCCGACCCGGCTACCCACCCCGACGACGGATACTACTCCACCGTATCCAAATTAATAAAGTCCGTTAGCTCCGGCGACACCGCGCTCATGGACGCCGCCGTTTCGGAGATCGAGGACTCGGCTTCCCGCGGCCTCCCTCACGCGCGGTCCGTTCTGGGGTTTCTGTACGGTACGGGCCAGATGAGGAAGCAGAACAAGGCCAAGGCTTTCACGTACCATTACTTCGCCGCTAAGGCCGGCAACATGCAGTCGAAGATGGCCCTCGCGTATACTTACTTCAGGCAAGATATGTTTGATAAAGCGGTGAAATTGTACTCGGAATTGGCCGAGGCAGCTGTGAATAGCTTCCTGATTTCGAGGGACTCAGCGGTGATCGAGGCGGTGAGGATCCACAGCGGAGCGGAGGAGAACAAGGAGGCATTGAGGAAGAGCCGCGGCGAAGAAGACGAGGACTTTCAAATTTTGGAGTACCAAGCGCAGAAGGGAAACTCTGCTGCAATGTATAAGGTGGGCCTGTTTTACTATTTCGGGCTGAGAGGGTTGCGCCGCGACCACGCCAAGGCGTTGTCGTGGTTTCTGAAGGCGTTGGAGAAGGGAGAGCCTCGGGCGATGGAGCTCCTCGGAGAGATTTATGCTAGGGGAGCTGGTGTTGAGAGGAATTACACCAAGGCTTTGGAGTGGCTTACACTTGCAGCCAAACAGGATCACTATTCGGCATATAACGGGATGGGGTATTTGTATGTTAAAGGATATGGGGTGGAGAAGAAGAACTACACTAAAGCAAAGGAGTATTTTGAGAAAGCTGCTGATAATCATGACGGTGGCGGGCACTATAACCTAGGAGTAATGTATCTCAAAGGAATTGGGGTAAAGAGAGATGTTAAACTTGCATGTCAATACTTCATCTTTGCTGCGAATGCTGGTCAACCCAAGGCATTCTACCAGCTAGGGAAGATGTTTCATACAGGAGTCGGGCTTAAGAAGAATCTTCCACGGGCCATTGCATTATACAAATTAGTTGCAGAAAGGGGACCGTGGAGCTCATTGTCTCGATGGGCACTTGAATCATACTTAAGAGGGGACCTAGGCAAGGCATTTTTCTTGTATTCAAGGATGGCCGAGTTAGGCTATGAGGTAGCGCAGAGTAACGCTGCATGGATTCTTGACAAATATGGAGAGCGAAGCATGTGCATGGGAGAATCTGGTTTGTGCACTAATGCAGAAAGGCATCAGCGGGCACATTCATTATGGTGGCAAGCATCTGAGCAGGGTAATGAACACGCTGCTTTGCTGATTGGGGATGCGTATTACTATGGTCAGGTAGCTATCTCATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

566

Amino Acids

63.11

Weight (kDa)

6.9

Isoelectric Point (pI)

46.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	284 - 319	1.2e-07	Sel1 repeat
Sel1	PF08238	321 - 356	8.4e-09	Sel1 repeat
Sel1	PF08238	359 - 391	4.5e-07	Sel1 repeat
Sel1	PF08238	397 - 428	1e-06	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	330
AccBSI	CCGCTC	1 cut(s)	761
AccI	GTMKAC	1 cut(s)	629
AccII	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
AclWI	GGATC	5 cut(s)	318, 331, 742, 755, 1071
AcoI	YGGCCR	2 cut(s)	684, 1476
AcsI	RAATTY	3 cut(s)	65, 94, 819
AcuI	CTGAAG	2 cut(s)	622, 959
AcyI	GRCGYC	3 cut(s)	291, 331, 453
AfaI	GTAC	5 cut(s)	527, 532, 575, 674, 830
AfiI	CCNNNNNNNGG	5 cut(s)	358, 386, 516, 919, 1450
AflII	CTTAAG	2 cut(s)	1337, 1432
AgsI	TTSAA	3 cut(s)	818, 1424, 1470
AjnI	CCWGG	1 cut(s)	326
Alw21I	GWGCWC	4 cut(s)	315, 978, 1403, 1574
Alw26I	GTCTC	1 cut(s)	1413
Alw44I	GTGCAC	1 cut(s)	1570
AlwI	GGATC	5 cut(s)	318, 331, 742, 755, 1071
Ama87I	CYCGRG	2 cut(s)	319, 963
ApaLI	GTGCAC	1 cut(s)	1570
ApeKI	GCWGC	8 cut(s)	101, 692, 854, 1052, 1163, 1271, 1511, 1643
ApoI	RAATTY	3 cut(s)	65, 94, 819
AseI	ATTAAT	1 cut(s)	413
Asp700I	GAANNNNTTC	1 cut(s)	704
AspA2I	CCTAGG	2 cut(s)	1198, 1444
AspLEI	GCGC	7 cut(s)	298, 333, 445, 505, 838, 906, 1501
AspS9I	GGNCC	7 cut(s)	507, 535, 619, 871, 1356, 1391, 1441
AsuC2I	CCSGG	3 cut(s)	320, 321, 368
AsuHPI	GGTGA	3 cut(s)	676, 742, 754
AsuII	TTCGAA	1 cut(s)	342
AvaI	CYCGRG	2 cut(s)	319, 963
AvaII	GGWCC	3 cut(s)	507, 1391, 1441
AvrII	CCTAGG	2 cut(s)	1198, 1444
BaeGI	GKGCMC	4 cut(s)	1191, 1420, 1574, 1600
BamHI	GGATCC	2 cut(s)	323, 747
BanI	GGYRCC	1 cut(s)	330
BanII	GRGCYC	3 cut(s)	315, 978, 1403
BarI	GAAGNNNNNNTAC	6 cut(s)	566, 598, 620, 652, 1115, 1147
BbsI	GAAGAC	2 cut(s)	33, 810
Bbv12I	GWGCWC	4 cut(s)	315, 978, 1403, 1574
BbvI	GCAGC	8 cut(s)	113, 704, 841, 1064, 1150, 1258, 1498, 1630
BccI	CCATC	6 cut(s)	61, 610, 964, 1081, 1407, 1468
BceAI	ACGGC	1 cut(s)	443
BcgI	CGANNNNNNTGC	2 cut(s)	1530, 1564
BciT130I	CCWGG	1 cut(s)	328
BciVI	GTATCC	2 cut(s)	383, 415
BcnI	CCSGG	3 cut(s)	320, 321, 368
BcoDI	GTCTC	1 cut(s)	1413
BfaI	CTAG	4 cut(s)	996, 1199, 1307, 1445
BfoI	RGCGCY	1 cut(s)	334
BfrI	CTTAAG	2 cut(s)	1337, 1432
BfuI	GTATCC	2 cut(s)	383, 415
BglI	GCCNNNNNGGC	2 cut(s)	368, 593
BlnI	CCTAGG	2 cut(s)	1198, 1444
Bme1390I	CCNGG	4 cut(s)	320, 321, 328, 368
Bme18I	GGWCC	3 cut(s)	507, 1391, 1441
BmeT110I	CYCGRG	2 cut(s)	319, 963
BmgT120I	GGNCC	7 cut(s)	507, 535, 619, 871, 1356, 1391, 1441
BmiI	GGNNCC	5 cut(s)	325, 332, 749, 1392, 1442
BmrFI	CCNGG	4 cut(s)	320, 321, 328, 368
BmrI	ACTGGG	1 cut(s)	277
BmsI	GCATC	3 cut(s)	1597, 1628, 1651
BmuI	ACTGGG	1 cut(s)	277
BpiI	GAAGAC	2 cut(s)	33, 810
Bpu10I	CCTNAGC	1 cut(s)	591
Bpu14I	TTCGAA	1 cut(s)	342
BpuMI	CCSGG	3 cut(s)	320, 321, 368
BsaAI	YACGTR	1 cut(s)	573
BsaHI	GRCGYC	3 cut(s)	291, 331, 453
BsaXI	ACNNNNNCTCC	2 cut(s)	993, 1023
Bsc4I	CCNNNNNNNGG	5 cut(s)	358, 386, 516, 919, 1450
Bse118I	RCCGGY	1 cut(s)	596
Bse1I	ACTGG	1 cut(s)	272
Bse3DI	GCAATG	3 cut(s)	96, 864, 1359
BseBI	CCWGG	1 cut(s)	328
BseGI	GGATG	4 cut(s)	171, 1092, 1479, 1666
BseLI	CCNNNNNNNGG	5 cut(s)	358, 386, 516, 919, 1450
BseMI	GCAATG	3 cut(s)	96, 864, 1359
BseMII	CTCAG	4 cut(s)	258, 738, 884, 1614
BseNI	ACTGG	1 cut(s)	272
BseRI	GAGGAG	5 cut(s)	104, 320, 323, 779, 968
BseSI	GKGCMC	4 cut(s)	1191, 1420, 1574, 1600
BseXI	GCAGC	8 cut(s)	113, 704, 841, 1064, 1150, 1258, 1498, 1630
Bsh1236I	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
BshNI	GGYRCC	1 cut(s)	330
BsiHKAI	GWGCWC	4 cut(s)	315, 978, 1403, 1574
BsiHKCI	CYCGRG	2 cut(s)	319, 963
BsiSI	CCGG	4 cut(s)	320, 368, 432, 597
BslFI	GGGAC	5 cut(s)	150, 284, 734, 1404, 1454
BslI	CCNNNNNNNGG	5 cut(s)	358, 386, 516, 919, 1450
BsmAI	GTCTC	1 cut(s)	1413
BsmFI	GGGAC	5 cut(s)	150, 284, 734, 1404, 1454
BsmI	GAATGC	2 cut(s)	1282, 1295
BsoBI	CYCGRG	2 cut(s)	319, 963
Bsp119I	TTCGAA	1 cut(s)	342
Bsp1286I	GDGCHC	7 cut(s)	315, 978, 1191, 1403, 1420, 1574, 1600
Bsp143I	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
BspCNI	CTCAG	4 cut(s)	257, 737, 885, 1615
BspFNI	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	5 cut(s)	325, 332, 749, 1392, 1442
BspPI	GGATC	5 cut(s)	318, 331, 742, 755, 1071
BspQI	GCTCTTC	1 cut(s)	782
BspT104I	TTCGAA	1 cut(s)	342
BspT107I	GGYRCC	1 cut(s)	330
BspTI	CTTAAG	2 cut(s)	1337, 1432
BsrBI	CCGCTC	1 cut(s)	761
BsrDI	GCAATG	3 cut(s)	96, 864, 1359
BsrFI	RCCGGY	1 cut(s)	596
BsrI	ACTGG	1 cut(s)	272
BssAI	RCCGGY	1 cut(s)	596
BssMI	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
BssNAI	GTATAC	1 cut(s)	630
BssNI	GRCGYC	3 cut(s)	291, 331, 453
BssT1I	CCWWGG	6 cut(s)	561, 918, 1026, 1198, 1290, 1444
Bst1107I	GTATAC	1 cut(s)	630
Bst2UI	CCWGG	1 cut(s)	328
Bst4CI	ACNGT	4 cut(s)	403, 530, 1181, 1395
Bst6I	CTCTTC	2 cut(s)	146, 782
BstACI	GRCGYC	3 cut(s)	291, 331, 453
BstAFI	CTTAAG	2 cut(s)	1337, 1432
BstBAI	YACGTR	1 cut(s)	573
BstBI	TTCGAA	1 cut(s)	342
BstC8I	GCNNGC	5 cut(s)	234, 598, 1187, 1596, 1617
BstDEI	CTNAG	5 cut(s)	244, 591, 724, 893, 1623
BstDSI	CCRYGG	4 cut(s)	487, 793, 1352, 1394
BstENI	CCTNNNNNAGG	1 cut(s)	1448
BstF5I	GGATG	4 cut(s)	171, 1092, 1479, 1666
BstFNI	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
BstH2I	RGCGCY	1 cut(s)	334
BstHHI	GCGC	7 cut(s)	298, 333, 445, 505, 838, 906, 1501
BstKTI	GATC	6 cut(s)	196, 326, 471, 735, 750, 1066
BstMAI	GTCTC	1 cut(s)	1413
BstMBI	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
BstMWI	GCNNNNNNNGC	6 cut(s)	245, 368, 593, 692, 1001, 1277
BstNI	CCWGG	1 cut(s)	328
BstNSI	RCATGY	3 cut(s)	607, 1254, 1549
BstSCI	CCNGG	4 cut(s)	318, 319, 326, 366
BstSLI	GKGCMC	4 cut(s)	1191, 1420, 1574, 1600
BstUI	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
BstV1I	GCAGC	8 cut(s)	113, 704, 841, 1064, 1150, 1258, 1498, 1630
BstV2I	GAAGAC	2 cut(s)	33, 810
BstX2I	RGATCY	2 cut(s)	323, 747
BstXI	CCANNNNNNTGG	1 cut(s)	1033
BstYI	RGATCY	2 cut(s)	323, 747
BstZ17I	GTATAC	1 cut(s)	630
BsuI	GTATCC	2 cut(s)	383, 415
BtgI	CCRYGG	4 cut(s)	487, 793, 1352, 1394
BtgZI	GCGATG	1 cut(s)	983
BtsCI	GGATG	4 cut(s)	171, 1092, 1479, 1666
Cac8I	GCNNGC	5 cut(s)	234, 598, 1187, 1596, 1617
CciI	TCATGA	1 cut(s)	1174
CfoI	GCGC	7 cut(s)	298, 333, 445, 505, 838, 906, 1501
Cfr10I	RCCGGY	1 cut(s)	596
Cfr13I	GGNCC	7 cut(s)	507, 535, 619, 871, 1356, 1391, 1441
Cfr42I	CCGCGG	2 cut(s)	490, 796
Cfr9I	CCCGGG	1 cut(s)	319
CpoI	CGGWCCG	1 cut(s)	507
CseI	GACGC	3 cut(s)	148, 299, 461
Csp6I	GTAC	5 cut(s)	526, 531, 574, 673, 829
CspI	CGGWCCG	1 cut(s)	507
CviAII	CATG	8 cut(s)	448, 604, 1175, 1251, 1515, 1546, 1552, 1692
CviQI	GTAC	5 cut(s)	526, 531, 574, 673, 829
DdeI	CTNAG	5 cut(s)	244, 591, 724, 893, 1623
DinI	GGCGCC	1 cut(s)	332
DpnI	GATC	6 cut(s)	195, 325, 470, 734, 749, 1065
DpnII	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
EaeI	YGGCCR	2 cut(s)	684, 1476
Eam1104I	CTCTTC	2 cut(s)	146, 782
EarI	CTCTTC	2 cut(s)	146, 782
Ecl136II	GAGCTC	3 cut(s)	313, 976, 1401
Eco130I	CCWWGG	6 cut(s)	561, 918, 1026, 1198, 1290, 1444
Eco24I	GRGCYC	3 cut(s)	315, 978, 1403
Eco47I	GGWCC	3 cut(s)	507, 1391, 1441
Eco53kI	GAGCTC	3 cut(s)	313, 976, 1401
Eco57I	CTGAAG	2 cut(s)	622, 959
Eco88I	CYCGRG	2 cut(s)	319, 963
EcoICRI	GAGCTC	3 cut(s)	313, 976, 1401
EcoNI	CCTNNNNNAGG	1 cut(s)	1448
EcoO109I	RGGNCCY	1 cut(s)	1441
EcoRII	CCWGG	1 cut(s)	326
EcoT14I	CCWWGG	6 cut(s)	561, 918, 1026, 1198, 1290, 1444
EcoT38I	GRGCYC	3 cut(s)	315, 978, 1403
EgeI	GGCGCC	1 cut(s)	332
EheI	GGCGCC	1 cut(s)	332
ErhI	CCWWGG	6 cut(s)	561, 918, 1026, 1198, 1290, 1444
FaeI	CATG	8 cut(s)	451, 607, 1178, 1254, 1518, 1549, 1555, 1695
FalI	AAGNNNNNCTT	2 cut(s)	101, 133
FaqI	GGGAC	5 cut(s)	150, 284, 734, 1404, 1454
FatI	CATG	8 cut(s)	447, 603, 1174, 1250, 1514, 1545, 1551, 1691
FauI	CCCGC	4 cut(s)	241, 494, 1178, 1587
FblI	GTMKAC	1 cut(s)	629
FokI	GGATG	4 cut(s)	158, 1099, 1486, 1673
FriOI	GRGCYC	3 cut(s)	315, 978, 1403
FspBI	CTAG	4 cut(s)	996, 1199, 1307, 1445
GlaI	GCGC	7 cut(s)	297, 332, 444, 504, 837, 905, 1500
HaeII	RGCGCY	1 cut(s)	334
HapII	CCGG	4 cut(s)	320, 368, 432, 597
HgaI	GACGC	3 cut(s)	148, 299, 461
HhaI	GCGC	7 cut(s)	298, 333, 445, 505, 838, 906, 1501
Hin1I	GRCGYC	3 cut(s)	291, 331, 453
Hin1II	CATG	8 cut(s)	451, 607, 1178, 1254, 1518, 1549, 1555, 1695
Hin6I	GCGC	7 cut(s)	296, 331, 443, 503, 836, 904, 1499
HinP1I	GCGC	7 cut(s)	296, 331, 443, 503, 836, 904, 1499
HincII	GTYRAC	1 cut(s)	1286
HindII	GTYRAC	1 cut(s)	1286
HpaII	CCGG	4 cut(s)	320, 368, 432, 597
HphI	GGTGA	3 cut(s)	676, 742, 754
Hpy166II	GTNNAC	3 cut(s)	630, 1286, 1572
Hpy188I	TCNGA	7 cut(s)	289, 304, 466, 679, 939, 983, 1624
Hpy188III	TCNNGA	5 cut(s)	127, 709, 1175, 1410, 1523
Hpy8I	GTNNAC	3 cut(s)	630, 1286, 1572
Hpy99I	CGWCG	3 cut(s)	293, 386, 389
HpyAV	CCTTC	5 cut(s)	24, 178, 835, 934, 946
HpyCH4III	ACNGT	4 cut(s)	403, 530, 1181, 1395
HpyCH4IV	ACGT	1 cut(s)	572
HpyF10VI	GCNNNNNNNGC	6 cut(s)	245, 368, 593, 692, 1001, 1277
HpyF3I	CTNAG	5 cut(s)	244, 591, 724, 893, 1623
HpySE526I	ACGT	1 cut(s)	572
Hsp92I	GRCGYC	3 cut(s)	291, 331, 453
Hsp92II	CATG	8 cut(s)	451, 607, 1178, 1254, 1518, 1549, 1555, 1695
HspAI	GCGC	7 cut(s)	296, 331, 443, 503, 836, 904, 1499
KasI	GGCGCC	1 cut(s)	330
KroI	GCCGGC	1 cut(s)	596
KroNI	GCCGGC	1 cut(s)	598
KspI	CCGCGG	2 cut(s)	490, 796
Kzo9I	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
LguI	GCTCTTC	1 cut(s)	782
LmnI	GCTCC	9 cut(s)	117, 253, 310, 434, 758, 973, 981, 1001, 1398
Lsp1109I	GCAGC	8 cut(s)	113, 704, 841, 1064, 1150, 1258, 1498, 1630
LweI	GCATC	3 cut(s)	1597, 1628, 1651
MaeI	CTAG	4 cut(s)	996, 1199, 1307, 1445
MaeII	ACGT	1 cut(s)	572
MaeIII	GTNAC	1 cut(s)	1505
MalI	GATC	6 cut(s)	195, 325, 470, 734, 749, 1065
MbiI	CCGCTC	1 cut(s)	761
MboI	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
MflI	RGATCY	2 cut(s)	323, 747
MhlI	GDGCHC	7 cut(s)	315, 978, 1191, 1403, 1420, 1574, 1600
MluCI	AATT	9 cut(s)	65, 94, 410, 668, 680, 819, 1018, 1221, 1373
Mly113I	GGCGCC	1 cut(s)	331
MlyI	GAGTC	6 cut(s)	236, 266, 278, 470, 716, 1338
MmeI	TCCRAC	2 cut(s)	312, 927
MroNI	GCCGGC	1 cut(s)	596
MroXI	GAANNNNTTC	1 cut(s)	704
MseI	TTAA	7 cut(s)	23, 357, 413, 1104, 1242, 1338, 1433
MslI	CAYNNNNRTG	3 cut(s)	1179, 1550, 1609
MspA1I	CMGCKG	6 cut(s)	489, 695, 728, 756, 795, 1594
MspCI	CTTAAG	2 cut(s)	1337, 1432
MspI	CCGG	4 cut(s)	320, 368, 432, 597
MspR9I	CCNGG	4 cut(s)	320, 321, 328, 368
Mva1269I	GAATGC	2 cut(s)	1282, 1295
MvaI	CCWGG	1 cut(s)	328
MvnI	CGCG	8 cut(s)	296, 443, 489, 503, 505, 626, 795, 909
MwoI	GCNNNNNNNGC	6 cut(s)	245, 368, 593, 692, 1001, 1277
NaeI	GCCGGC	1 cut(s)	598
NarI	GGCGCC	1 cut(s)	331
NciI	CCSGG	3 cut(s)	320, 321, 368
NdeII	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
NgoMIV	GCCGGC	1 cut(s)	596
NlaIII	CATG	8 cut(s)	451, 607, 1178, 1254, 1518, 1549, 1555, 1695
NlaIV	GGNNCC	5 cut(s)	325, 332, 749, 1392, 1442
NmeAIII	GCCGAG	3 cut(s)	458, 712, 1504
NspI	RCATGY	3 cut(s)	607, 1254, 1549
NspV	TTCGAA	1 cut(s)	342
PagI	TCATGA	1 cut(s)	1174
PciSI	GCTCTTC	1 cut(s)	782
PcsI	WCGNNNNNNNCGW	2 cut(s)	279, 507
PctI	GAATGC	2 cut(s)	1282, 1295
PdiI	GCCGGC	1 cut(s)	598
PdmI	GAANNNNTTC	1 cut(s)	704
PfeI	GAWTC	5 cut(s)	6, 1345, 1424, 1519, 1559
PleI	GAGTC	6 cut(s)	236, 265, 278, 470, 716, 1337
PluTI	GGCGCC	1 cut(s)	334
PpsI	GAGTC	6 cut(s)	236, 265, 278, 470, 716, 1337
Ppu21I	YACGTR	1 cut(s)	573
PpuMI	RGGWCCY	1 cut(s)	1441
PshBI	ATTAAT	1 cut(s)	413
Psp124BI	GAGCTC	3 cut(s)	315, 978, 1403
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	1 cut(s)	326
PspGI	CCWGG	1 cut(s)	326
PspN4I	GGNNCC	5 cut(s)	325, 332, 749, 1392, 1442
PspPI	GGNCC	7 cut(s)	507, 535, 619, 871, 1356, 1391, 1441
PspPPI	RGGWCCY	1 cut(s)	1441
PsuI	RGATCY	2 cut(s)	323, 747
PvuII	CAGCTG	1 cut(s)	695
RsaI	GTAC	5 cut(s)	527, 532, 575, 674, 830
RsaNI	GTAC	5 cut(s)	526, 531, 574, 673, 829
RseI	CAYNNNNRTG	3 cut(s)	1179, 1550, 1609
Rsr2I	CGGWCCG	1 cut(s)	507
RsrII	CGGWCCG	1 cut(s)	507
SacI	GAGCTC	3 cut(s)	315, 978, 1403
SacII	CCGCGG	2 cut(s)	490, 796
SapI	GCTCTTC	1 cut(s)	782
SaqAI	TTAA	7 cut(s)	23, 357, 413, 1104, 1242, 1338, 1433
Sau3AI	GATC	6 cut(s)	193, 323, 468, 732, 747, 1063
Sau96I	GGNCC	7 cut(s)	507, 535, 619, 871, 1356, 1391, 1441
SchI	GAGTC	6 cut(s)	236, 266, 278, 470, 716, 1338
ScrFI	CCNGG	4 cut(s)	320, 321, 328, 368
SduI	GDGCHC	7 cut(s)	315, 978, 1191, 1403, 1420, 1574, 1600
SfaNI	GCATC	3 cut(s)	1597, 1628, 1651
SfoI	GGCGCC	1 cut(s)	332
Sfr303I	CCGCGG	2 cut(s)	490, 796
SfuI	TTCGAA	1 cut(s)	342
SgrBI	CCGCGG	2 cut(s)	490, 796
SinI	GGWCC	3 cut(s)	507, 1391, 1441
SmaI	CCCGGG	1 cut(s)	321
SmiMI	CAYNNNNRTG	3 cut(s)	1179, 1550, 1609
SmlI	CTYRAG	2 cut(s)	1337, 1432
SmoI	CTYRAG	2 cut(s)	1337, 1432
Sse9I	AATT	9 cut(s)	65, 94, 410, 668, 680, 819, 1018, 1221, 1373
SspDI	GGCGCC	1 cut(s)	330
SspMI	CTAG	4 cut(s)	996, 1199, 1307, 1445
SstI	GAGCTC	3 cut(s)	315, 978, 1403
StyD4I	CCNGG	4 cut(s)	318, 319, 326, 366
StyI	CCWWGG	6 cut(s)	561, 918, 1026, 1198, 1290, 1444
TaaI	ACNGT	4 cut(s)	403, 530, 1181, 1395
TaiI	ACGT	1 cut(s)	575
TaqI	TCGA	8 cut(s)	106, 315, 342, 471, 611, 716, 735, 1411
TasI	AATT	9 cut(s)	65, 94, 410, 668, 680, 819, 1018, 1221, 1373
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	9 cut(s)	232, 239, 296, 458, 492, 590, 795, 798, 909
TfiI	GAWTC	5 cut(s)	6, 1345, 1424, 1519, 1559
Tru1I	TTAA	7 cut(s)	23, 357, 413, 1104, 1242, 1338, 1433
Tru9I	TTAA	7 cut(s)	23, 357, 413, 1104, 1242, 1338, 1433
TseI	GCWGC	8 cut(s)	101, 692, 854, 1052, 1163, 1271, 1511, 1643
TspDTI	ATGAA	6 cut(s)	107, 160, 1252, 1310, 1593, 1650
TspGWI	ACGGA	4 cut(s)	152, 402, 412, 499
TspMI	CCCGGG	1 cut(s)	319
Vha464I	CTTAAG	2 cut(s)	1337, 1432
VneI	GTGCAC	1 cut(s)	1570
VpaK11BI	GGWCC	3 cut(s)	507, 1391, 1441
VspI	ATTAAT	1 cut(s)	413
XagI	CCTNNNNNAGG	1 cut(s)	1448
XapI	RAATTY	3 cut(s)	65, 94, 819
XceI	RCATGY	3 cut(s)	607, 1254, 1549
XmaI	CCCGGG	1 cut(s)	319
XmaJI	CCTAGG	2 cut(s)	1198, 1444
XmiI	GTMKAC	1 cut(s)	629
XmnI	GAANNNNTTC	1 cut(s)	704
XspI	CTAG	4 cut(s)	996, 1199, 1307, 1445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.