pycom15g06070

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0007467
Physical Location & Seq
Forward (+)
3708066 .. 3708682
617 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGGGCGGCGGCGACGAGGACGGTGATCGGAGTAGGAATAGGAATGGGCCGTGGACGCCGCCGGGAAGACCGTATGAGGCAAAAGAGGAAGACATCAAGATTTGGGGGATTCTGGTGTTTGGTCTAATTGGCGCCACCGCCACCACTCTCGCGATCACCGTCGACGGGGAGAGGAAGTGGCAGTTCATTCCGGACATCTTTTCAGGAGGAAGCATGGAAAAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

76

Amino Acids

8.22

Weight (kDa)

4.76

Isoelectric Point (pI)

24.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 162
AccII CGCG 1 cut(s) 152
AccIII TCCGGA 1 cut(s) 190
AciI CCGC 4 cut(s) 6, 9, 59, 138
AcyI GRCGYC 2 cut(s) 56, 132
AfiI CCNNNNNNNGG 1 cut(s) 165
Aor13HI TCCGGA 1 cut(s) 190
AoxI GGCC 1 cut(s) 47
AspLEI GCGC 1 cut(s) 134
AspS9I GGNCC 1 cut(s) 47
AsuC2I CCSGG 1 cut(s) 63
AsuHPI GGTGA 2 cut(s) 35, 148
BanI GGYRCC 1 cut(s) 131
BbsI GAAGAC 2 cut(s) 73, 96
BceAI ACGGC 1 cut(s) 34
BcnI CCSGG 1 cut(s) 63
BfoI RGCGCY 1 cut(s) 135
BisI GCNGC 3 cut(s) 7, 10, 59
BlsI GCNGC 3 cut(s) 8, 11, 60
Bme1390I CCNGG 1 cut(s) 63
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 1 cut(s) 133
BmrFI CCNGG 1 cut(s) 63
BpiI GAAGAC 2 cut(s) 73, 96
BpuMI CCSGG 1 cut(s) 63
BsaHI GRCGYC 2 cut(s) 56, 132
BsaJI CCNNGG 1 cut(s) 50
BsaWI WCCGGW 1 cut(s) 190
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 1 cut(s) 165
BseAI TCCGGA 1 cut(s) 190
BseDI CCNNGG 1 cut(s) 50
BseLI CCNNNNNNNGG 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 152
BshFI GGCC 1 cut(s) 49
BshNI GGYRCC 1 cut(s) 131
BsiSI CCGG 2 cut(s) 62, 191
BslI CCNNNNNNNGG 1 cut(s) 165
BsnI GGCC 1 cut(s) 49
Bsp13I TCCGGA 1 cut(s) 190
Bsp143I GATC 2 cut(s) 25, 153
Bsp68I TCGCGA 1 cut(s) 152
BspACI CCGC 4 cut(s) 6, 9, 59, 138
BspANI GGCC 1 cut(s) 49
BspEI TCCGGA 1 cut(s) 190
BspFNI CGCG 1 cut(s) 152
BspLI GGNNCC 1 cut(s) 133
BspT107I GGYRCC 1 cut(s) 131
BssECI CCNNGG 1 cut(s) 50
BssMI GATC 2 cut(s) 25, 153
BssNI GRCGYC 2 cut(s) 56, 132
Bst4CI ACNGT 3 cut(s) 23, 72, 160
BstACI GRCGYC 2 cut(s) 56, 132
BstDSI CCRYGG 1 cut(s) 50
BstFNI CGCG 1 cut(s) 152
BstH2I RGCGCY 1 cut(s) 135
BstHHI GCGC 1 cut(s) 134
BstKTI GATC 2 cut(s) 28, 156
BstMBI GATC 2 cut(s) 25, 153
BstMWI GCNNNNNNNGC 1 cut(s) 55
BstSCI CCNGG 1 cut(s) 61
BstUI CGCG 1 cut(s) 152
BstV2I GAAGAC 2 cut(s) 73, 96
BsuRI GGCC 1 cut(s) 49
BtgI CCRYGG 1 cut(s) 50
BtuMI TCGCGA 1 cut(s) 152
CfoI GCGC 1 cut(s) 134
Cfr13I GGNCC 1 cut(s) 47
CseI GACGC 1 cut(s) 64
CviAII CATG 1 cut(s) 214
CviJI RGCY 1 cut(s) 49
CviKI_1 RGCY 1 cut(s) 49
DinI GGCGCC 1 cut(s) 133
DpnI GATC 2 cut(s) 27, 155
DpnII GATC 2 cut(s) 25, 153
EgeI GGCGCC 1 cut(s) 133
EheI GGCGCC 1 cut(s) 133
FaeI CATG 1 cut(s) 217
FaiI YATR 3 cut(s) 75, 215, 226
FatI CATG 1 cut(s) 213
FblI GTMKAC 1 cut(s) 162
Fnu4HI GCNGC 3 cut(s) 7, 10, 59
Fsp4HI GCNGC 3 cut(s) 7, 10, 59
GlaI GCGC 1 cut(s) 133
GluI GCNGC 3 cut(s) 7, 10, 59
HaeII RGCGCY 1 cut(s) 135
HaeIII GGCC 1 cut(s) 49
HapII CCGG 2 cut(s) 62, 191
HgaI GACGC 1 cut(s) 64
HhaI GCGC 1 cut(s) 134
Hin1I GRCGYC 2 cut(s) 56, 132
Hin1II CATG 1 cut(s) 217
Hin6I GCGC 1 cut(s) 132
HinP1I GCGC 1 cut(s) 132
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 1 cut(s) 109
HpaII CCGG 2 cut(s) 62, 191
HphI GGTGA 2 cut(s) 35, 148
Hpy166II GTNNAC 2 cut(s) 54, 163
Hpy188I TCNGA 1 cut(s) 30
Hpy188III TCNNGA 4 cut(s) 97, 151, 191, 204
Hpy8I GTNNAC 2 cut(s) 54, 163
Hpy99I CGWCG 3 cut(s) 17, 164, 167
HpyCH4III ACNGT 3 cut(s) 23, 72, 160
HpyF10VI GCNNNNNNNGC 1 cut(s) 55
Hsp92I GRCGYC 2 cut(s) 56, 132
Hsp92II CATG 1 cut(s) 217
HspAI GCGC 1 cut(s) 132
KasI GGCGCC 1 cut(s) 131
Kpn2I TCCGGA 1 cut(s) 190
Kzo9I GATC 2 cut(s) 25, 153
LpnPI CCDG 4 cut(s) 75, 98, 189, 204
MalI GATC 2 cut(s) 27, 155
MboI GATC 2 cut(s) 25, 153
MboII GAAGA 2 cut(s) 78, 101
MluCI AATT 1 cut(s) 126
Mly113I GGCGCC 1 cut(s) 132
MnlI CCTC 5 cut(s) 10, 70, 79, 165, 200
MroI TCCGGA 1 cut(s) 190
MspI CCGG 2 cut(s) 62, 191
MspR9I CCNGG 1 cut(s) 63
MvnI CGCG 1 cut(s) 152
MwoI GCNNNNNNNGC 1 cut(s) 55
NarI GGCGCC 1 cut(s) 132
NciI CCSGG 1 cut(s) 63
NdeII GATC 2 cut(s) 25, 153
NlaIII CATG 1 cut(s) 217
NlaIV GGNNCC 1 cut(s) 133
NruI TCGCGA 1 cut(s) 152
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PfeI GAWTC 1 cut(s) 109
PkrI GCNGC 3 cut(s) 8, 11, 60
PluTI GGCGCC 1 cut(s) 135
PspN4I GGNNCC 1 cut(s) 133
PspPI GGNCC 1 cut(s) 47
RruI TCGCGA 1 cut(s) 152
SalI GTCGAC 1 cut(s) 161
SatI GCNGC 3 cut(s) 7, 10, 59
Sau3AI GATC 2 cut(s) 25, 153
Sau96I GGNCC 1 cut(s) 47
ScrFI CCNGG 1 cut(s) 63
SfoI GGCGCC 1 cut(s) 133
SgrDI CGTCGACG 1 cut(s) 161
Sse9I AATT 1 cut(s) 126
SsiI CCGC 4 cut(s) 6, 9, 59, 138
SspDI GGCGCC 1 cut(s) 131
StyD4I CCNGG 1 cut(s) 61
TaaI ACNGT 3 cut(s) 23, 72, 160
TaqI TCGA 1 cut(s) 162
TasI AATT 1 cut(s) 126
TauI GCSGC 3 cut(s) 9, 12, 61
TfiI GAWTC 1 cut(s) 109
TspDTI ATGAA 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.