Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006442

Physical Location & Seq

Genomic Coordinates Forward (+)

7483319 .. 7489119

Gene Structure 5801 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2727 bp

ATGGAAGCCAATGCGGGACTGGTGGCCGGCTCTTACAAGAGGAACGAGCTCGTTCGGATTCGCCACGATTCCGATGGCGCGTCAAATTTTGTAAGGATTCTGAACTGTGAGCTGCACTGCTTCTTGTTCGTGGTGATTTGTGGTGATACTGTTGGACTTACAGCCACTGGTGATGTCTTTGTTGCCTGCAATGAGTGTGCCTTTCCAGTCTGTCGACCTTGTTATGAGTATGAGCGGAAAGATGGGAACCAGGCTTGCCCACAGTGCAAGACTAGATATAAAAGGCACAAAGGGAGTCCTCGAGTGGATGGAGATGATGATGAGGATGACATTGATGATCTGGAGAATGAGTTCAATTATACGCAAGGAACTAGCAATGCCAGACGCCAGTGGCAAGGAGAAGATGCTGATCTCTCATCTTCCTCGAGACATGAATCTCAACAGCCAATTCCCCTTCTCACGAATGGGCAGTTGGTATCTGGTGAGATTCCCTGTGCCACACCTGATAACCAATCTGTGCGAACTACATCAGGTCCTTTGGATCCGCGACAGCCAGTTCCAGTAAGAATAGTGGACCCATCAAAGGACTTGAATTCTTATGGGCTAGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGCTGGAAACTCAAACAGGACAAAAATATGATGCAGATGACTAGTAAATACGCTGAAGGAAAGGGGGACATGGAAGGCACTGGTTCAAATGGTGAAGAACTCCAAATGGCTGATGATGCTAGACAACCTTTGAGTCGCATCGTGCCTATTTCTTCATCTCATCTGACACCTTATCGTGTTGTGATCATACTCCGGCTTATTATTCTGGGTTTCTTCTTGCAATACCGTGCGACTCACCCAGTGAAAGATGCATACCCTTTATGGTTAACATCAGTCATCTGTGAGATTTGGTTTGCTTTATCCTGGCTTCTCGATCAGTTTCCAAAATGGTTTCCCATTAACCGTGAGACCTATCTTGATAGGCTCACACTGAGGTATGATCGTGATGGGGAGCCATCCCAGTTAGCTCCCATAGATGTGTTCGTTAGTACAGTGGATCCCATGAAAGAGCCTCCTCTGATTACAGCTAACACTGTTTTGTCCATACTTGCTGTGGATTACCCAGTGGACAAAGTCTCTTGCTATGTGTCAGATGATGGGTCAGCAATGCTTACATTTGAATCTCTTTCTGAAACTGCGGAGTTTGCTAGGAAGTGGGTACCTTTTTGCAAGAAGCACAACATTGAACCTAGAGCCCCTGAGTTTTATTTTGCCCAAAAGATTGACTACTTAAAGGACAAGATACAGCCTTCTTTCGTAAAAGAGCGTAGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTTCGGATCGATGCCCTAGTTGCCAAGGCACAGAAAATGCCTGAAGAAGGTTGGACAATGCAGGATGGAACTCCATGGCCTGGGAACAACCCTAGGGACCATCCAGGAATGATCCAGGTTTTCTTAGGTCACAGTGGGGGCCTTGATACTGATGGCAATGAGCTGCCTCGACTTGTTTATGTTTCTCGTGAGAAGCGACCTGGATTCCAGCATCACAAAAAAGCTGGAGCAATGAATGCATTGATTCGAGTTTCAGCCGTCCTGACAAACGGTGCATATCTCTTGAATGTCGATTGTGATCACTACTTCAATAACAGTAAAGCTCTTAAGGAAGCCATGTGTTTCATGATGGACCCAGCTTATGGGAAGAAGACCTGCTATGTCCAGTTCCCTCAGCGATTTGATGGCATTGATTTACACGATAGATATGCCAATCGGAACATTGTCTTCTTTGATATCAACTTGAAAGGGCTGGATGGCATCCAGGGTCCAGTCTATGTGGGAACTGGTTGTTGTTTCAACAGACAAGCTCTATATGGGTATGATCCGGTTTTGACTGAGGAAGATTTGCAGCCAAACATTATTGTAAAGAGTTGTTGTGGTTCAAGAAAGAAGAACAAGACTAGCAATAAGAAGTATATTGACAAGAAGAGGGCAGCTAAAAGAACGGAATCCACCATTCCCATTTTTAATATGGAAGACATTGAGGAGGGTGTTGAAGGTTATGATGATGAGAGGACTCTTCTTATGTCTCAGAAGAGCTTAGAGAAGCGTTTTGGTCAATCACCAGTTTTTATTGCAGCCACATTCATGGAACAGGGAGGCATTCCGCCTACAACCAATCCTGCAACTCTTTTGAAGGAAGCCATACATGTTATTAGCTGTGGATATGAAGACAAGAGTGAATGGGGAAAAGAGGTAAGTATAATTGGATGGATCTATGGCTCTGTGACTGAAGATATTTTAACTGGGTTTAAGATGCATGCTCGTGGTTGGATATCAGTCTATTGCATGCCTCCACGCCCAGCATTTAAGGGGTCTGCTCCCATCAATCTTTCTGATCGTTTGAACCAAGTGCTTCGATGGGCCTTGGGTTCCATTGAAATTCTGCTCAGCAGGCATTGTCCCATATGGTATGGCTACAATGGCAAGTTGAAGCTTTTGGAGAGACTTGCATACATCAATACCATCGTTTACCCCCTCACATCTATACCACTGATTGCATACTGTTTGCTTCCTGCCTTTTGCCTTCTCACAGAGAAGTTTATCATTCCTGAGGTAATAACTTCGCTAGCATGTGGTTCATTCTGCTCTTTGTTTCTATTATTGCAACTGGTATTCTTGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009628 GO:0009651 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042538 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

909

Amino Acids

102.67

Weight (kDa)

6.06

Isoelectric Point (pI)

42.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	45 - 110	1.9e-38	Zinc-binding RING-finger
zf-RING_4	PF14570	46 - 94	3.7e-06	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	350 - 902	6.9e-302	Cellulose synthase
Glyco_trans_2_3	PF13632	765 - 874	2.3e-07	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32410
fragaria_vesca	FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420
malus_domestica	MD08G1147200.v1.1 MD15G1123200.v1.1
prunus_persica	Prupe.1G478600_v2.0.a1 Prupe.1G478600_v2.0.a1
pyrus_communis	pycom08g12420 pycom15g11100
rosa_chinensis	RchiOBHm_Chr6g0298221
rosa_laevigata	RLG00000011525
rosa_multiflora	Rmu_sc0017507.1_g000003
rosa_roxburghii	Rroxscaffold_7G00169850
rosa_rugosa	Rorug06G0279600 Rorug06G0279600
rosa_samantha	Rh6AG389900 Rh6BG398300 Rh6CG404200 Rh6DG390900
rosa_wichuraiana	Rw6G034040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1760
Acc65I	GGTACC	1 cut(s)	1234
AccB1I	GGYRCC	1 cut(s)	1234
AccB7I	CCANNNNNTGG	2 cut(s)	1457, 1739
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	214
AccII	CGCG	2 cut(s)	80, 547
AciI	CCGC	5 cut(s)	14, 235, 545, 1214, 2207
AclWI	GGATC	8 cut(s)	536, 549, 1067, 1080, 1391, 1483, 1916, 2321
AcoI	YGGCCR	1 cut(s)	24
AcsI	RAATTY	4 cut(s)	85, 592, 1370, 2481
AcuI	CTGAAG	3 cut(s)	711, 1440, 2352
AcyI	GRCGYC	1 cut(s)	385
AdeI	CACNNNGTG	1 cut(s)	877
AfaI	GTAC	2 cut(s)	1066, 1236
AfiI	CCNNNNNNNGG	4 cut(s)	583, 1424, 1457, 1739
AflII	CTTAAG	1 cut(s)	1703
AflIII	ACRYGT	1 cut(s)	2248
AhlI	ACTAGT	1 cut(s)	677
AjnI	CCWGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
AjuI	GAANNNNNNNTTGG	2 cut(s)	455, 487
AloI	GAACNNNNNNTCC	2 cut(s)	335, 367
Alw21I	GWGCWC	1 cut(s)	51
Alw26I	GTCTC	5 cut(s)	421, 977, 1156, 2133, 2539
AlwI	GGATC	8 cut(s)	536, 549, 1067, 1080, 1391, 1483, 1916, 2321
AlwNI	CAGNNNCTG	1 cut(s)	167
Ama87I	CYCGRG	2 cut(s)	300, 424
AoxI	GGCC	4 cut(s)	24, 1454, 1516, 2463
ApeKI	GCWGC	5 cut(s)	112, 1540, 1948, 2033, 2177
ApoI	RAATTY	4 cut(s)	85, 592, 1370, 2481
Asp700I	GAANNNNTTC	1 cut(s)	350
Asp718I	GGTACC	1 cut(s)	1234
AspA2I	CCTAGG	1 cut(s)	1469
AspLEI	GCGC	1 cut(s)	80
AspS9I	GGNCC	7 cut(s)	533, 574, 1474, 1516, 1729, 1865, 2463
AsuHPI	GGTGA	7 cut(s)	145, 155, 182, 494, 740, 863, 2154
AsuNHI	GCTAGC	1 cut(s)	2668
AvaI	CYCGRG	2 cut(s)	300, 424
AvaII	GGWCC	5 cut(s)	533, 574, 1474, 1729, 1865
AvrII	CCTAGG	1 cut(s)	1469
AxyI	CCTNAGG	1 cut(s)	2652
BamHI	GGATCC	2 cut(s)	541, 1072
BanI	GGYRCC	1 cut(s)	1234
BanII	GRGCYC	2 cut(s)	51, 1273
BauI	CACGAG	2 cut(s)	1563, 2364
BbsI	GAAGAC	4 cut(s)	1754, 1816, 2082, 2277
Bbv12I	GWGCWC	1 cut(s)	51
BbvCI	CCTCAGC	1 cut(s)	1770
BbvI	GCAGC	5 cut(s)	99, 1527, 1960, 2045, 2189
BceAI	ACGGC	1 cut(s)	1619
BcgI	CGANNNNNNTGC	2 cut(s)	1787, 1821
BciT130I	CCWGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
BclI	TGATCA	2 cut(s)	819, 1675
BcoDI	GTCTC	5 cut(s)	421, 977, 1156, 2133, 2539
BcuI	ACTAGT	1 cut(s)	677
BfrI	CTTAAG	1 cut(s)	1703
BfuAI	ACCTGC	1 cut(s)	1760
BisI	GCNGC	5 cut(s)	113, 1541, 1949, 2034, 2178
BlnI	CCTAGG	1 cut(s)	1469
BlpI	GCTNAGC	1 cut(s)	2489
BlsI	GCNGC	5 cut(s)	114, 1542, 1950, 2035, 2179
Bme1390I	CCNGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
Bme18I	GGWCC	5 cut(s)	533, 574, 1474, 1729, 1865
BmeT110I	CYCGRG	2 cut(s)	300, 424
BmgT120I	GGNCC	7 cut(s)	533, 574, 1474, 1516, 1729, 1865, 2463
BmrFI	CCNGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
BmrI	ACTGGG	4 cut(s)	869, 1030, 1133, 2355
BmsI	GCATC	9 cut(s)	394, 657, 742, 783, 874, 1378, 1597, 1866, 2346
BmtI	GCTAGC	1 cut(s)	2672
BmuI	ACTGGG	4 cut(s)	869, 1030, 1133, 2355
BpiI	GAAGAC	4 cut(s)	1754, 1816, 2082, 2277
BpmI	CTGGAG	2 cut(s)	362, 1623
Bpu10I	CCTNAGC	1 cut(s)	1770
Bpu1102I	GCTNAGC	1 cut(s)	2489
Bsa29I	ATCGAT	1 cut(s)	1386
BsaBI	GATNNNNATC	2 cut(s)	408, 1674
BsaHI	GRCGYC	1 cut(s)	385
BsaI	GGTCTC	1 cut(s)	977
BsaJI	CCNNGG	6 cut(s)	1401, 1451, 1457, 1469, 1861, 2466
BsaWI	WCCGGW	1 cut(s)	1924
BsaXI	ACNNNNNCTCC	2 cut(s)	335, 365
Bsc4I	CCNNNNNNNGG	4 cut(s)	583, 1424, 1457, 1739
Bse118I	RCCGGY	1 cut(s)	26
Bse21I	CCTNAGG	1 cut(s)	2652
Bse3DI	GCAATG	6 cut(s)	196, 382, 1188, 1356, 1540, 1614
Bse8I	GATNNNNATC	2 cut(s)	408, 1674
BseBI	CCWGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
BseCI	ATCGAT	1 cut(s)	1386
BseDI	CCNNGG	6 cut(s)	1401, 1451, 1457, 1469, 1861, 2466
BseGI	GGATG	8 cut(s)	313, 331, 1031, 1447, 1477, 1857, 1858, 2315
BseJI	GATNNNNATC	2 cut(s)	408, 1674
BseLI	CCNNNNNNNGG	4 cut(s)	583, 1424, 1457, 1739
BseMI	GCAATG	6 cut(s)	196, 382, 1188, 1356, 1540, 1614
BseMII	CTCAG	7 cut(s)	998, 1266, 1784, 1926, 2144, 2503, 2643
BseRI	GAGGAG	2 cut(s)	1080, 2099
BseXI	GCAGC	5 cut(s)	99, 1527, 1960, 2045, 2189
BseYI	CCCAGC	2 cut(s)	1732, 2401
BsgI	GTGCAG	1 cut(s)	98
Bsh1236I	CGCG	2 cut(s)	80, 547
BshFI	GGCC	4 cut(s)	26, 1456, 1518, 2465
BshNI	GGYRCC	1 cut(s)	1234
BshVI	ATCGAT	1 cut(s)	1386
BsiHKAI	GWGCWC	1 cut(s)	51
BsiHKCI	CYCGRG	2 cut(s)	300, 424
BsiSI	CCGG	3 cut(s)	27, 829, 1925
BslFI	GGGAC	4 cut(s)	30, 716, 1487, 2487
BslI	CCNNNNNNNGG	4 cut(s)	583, 1424, 1457, 1739
BsmAI	GTCTC	5 cut(s)	421, 977, 1156, 2133, 2539
BsmFI	GGGAC	4 cut(s)	30, 716, 1487, 2487
BsmI	GAATGC	2 cut(s)	1618, 2202
BsnI	GGCC	4 cut(s)	26, 1456, 1518, 2465
Bso31I	GGTCTC	1 cut(s)	977
BsoBI	CYCGRG	2 cut(s)	300, 424
Bsp1286I	GDGCHC	2 cut(s)	51, 1273
Bsp1720I	GCTNAGC	1 cut(s)	2489
Bsp19I	CCATGG	1 cut(s)	1451
BspACI	CCGC	5 cut(s)	14, 235, 545, 1214, 2207
BspANI	GGCC	4 cut(s)	26, 1456, 1518, 2465
BspCNI	CTCAG	7 cut(s)	999, 1267, 1783, 1927, 2143, 2502, 2644
BspDI	ATCGAT	1 cut(s)	1386
BspFNI	CGCG	2 cut(s)	80, 547
BspHI	TCATGA	1 cut(s)	1722
BspMI	ACCTGC	1 cut(s)	1760
BspOI	GCTAGC	1 cut(s)	2672
BspPI	GGATC	8 cut(s)	536, 549, 1067, 1080, 1391, 1483, 1916, 2321
BspQI	GCTCTTC	1 cut(s)	2129
BspT107I	GGYRCC	1 cut(s)	1234
BspTI	CTTAAG	1 cut(s)	1703
BspTNI	GGTCTC	1 cut(s)	977
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	6 cut(s)	196, 382, 1188, 1356, 1540, 1614
BsrFI	RCCGGY	1 cut(s)	26
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	6 cut(s)	1401, 1451, 1457, 1469, 1861, 2466
BssNI	GRCGYC	1 cut(s)	385
BssSI	CACGAG	2 cut(s)	1563, 2364
BssT1I	CCWWGG	4 cut(s)	1401, 1451, 1469, 2466
Bst2BI	CACGAG	2 cut(s)	1563, 2364
Bst2UI	CCWGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
Bst6I	CTCTTC	4 cut(s)	1349, 2021, 2124, 2129
BstACI	GRCGYC	1 cut(s)	385
BstAFI	CTTAAG	1 cut(s)	1703
BstAPI	GCANNNNNTGC	1 cut(s)	1613
BstC8I	GCNNGC	7 cut(s)	28, 187, 256, 2361, 2390, 2495, 2670
BstDEI	CTNAG	9 cut(s)	1007, 1275, 1501, 1770, 1935, 2130, 2140, 2489, 2652
BstDSI	CCRYGG	1 cut(s)	1451
BstENI	CCTNNNNNAGG	1 cut(s)	1422
BstF5I	GGATG	8 cut(s)	313, 331, 1031, 1447, 1477, 1857, 1858, 2315
BstFNI	CGCG	2 cut(s)	80, 547
BstHHI	GCGC	1 cut(s)	80
BstMAI	GTCTC	5 cut(s)	421, 977, 1156, 2133, 2539
BstMWI	GCNNNNNNNGC	7 cut(s)	264, 752, 1220, 1397, 1613, 2494, 2523
BstNI	CCWGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
BstNSI	RCATGY	4 cut(s)	2252, 2363, 2392, 2676
BstSCI	CCNGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
BstUI	CGCG	2 cut(s)	80, 547
BstV1I	GCAGC	5 cut(s)	99, 1527, 1960, 2045, 2189
BstV2I	GAAGAC	4 cut(s)	1754, 1816, 2082, 2277
BstX2I	RGATCY	3 cut(s)	541, 1072, 2313
BstXI	CCANNNNNNTGG	1 cut(s)	2188
BstYI	RGATCY	3 cut(s)	541, 1072, 2313
Bsu15I	ATCGAT	1 cut(s)	1386
Bsu36I	CCTNAGG	1 cut(s)	2652
BsuRI	GGCC	4 cut(s)	26, 1456, 1518, 2465
BsuTUI	ATCGAT	1 cut(s)	1386
BtgI	CCRYGG	1 cut(s)	1451
BtsCI	GGATG	8 cut(s)	313, 331, 1031, 1447, 1477, 1857, 1858, 2315
BtsI	GCAGTG	1 cut(s)	115
BveI	ACCTGC	1 cut(s)	1760
Cac8I	GCNNGC	7 cut(s)	28, 187, 256, 2361, 2390, 2495, 2670
CaiI	CAGNNNCTG	1 cut(s)	167
CciI	TCATGA	1 cut(s)	1722
CfoI	GCGC	1 cut(s)	80
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	7 cut(s)	533, 574, 1474, 1516, 1729, 1865, 2463
ClaI	ATCGAT	1 cut(s)	1386
CseI	GACGC	2 cut(s)	69, 393
Csp6I	GTAC	2 cut(s)	1065, 1235
CviQI	GTAC	2 cut(s)	1065, 1235
DdeI	CTNAG	9 cut(s)	1007, 1275, 1501, 1770, 1935, 2130, 2140, 2489, 2652
DraIII	CACNNNGTG	1 cut(s)	877
EaeI	YGGCCR	1 cut(s)	24
Eam1104I	CTCTTC	4 cut(s)	1349, 2021, 2124, 2129
EarI	CTCTTC	4 cut(s)	1349, 2021, 2124, 2129
EciI	GGCGGA	1 cut(s)	2196
Ecl136II	GAGCTC	1 cut(s)	49
Eco130I	CCWWGG	4 cut(s)	1401, 1451, 1469, 2466
Eco24I	GRGCYC	2 cut(s)	51, 1273
Eco31I	GGTCTC	1 cut(s)	977
Eco32I	GATATC	2 cut(s)	1834, 2376
Eco47I	GGWCC	5 cut(s)	533, 574, 1474, 1729, 1865
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	3 cut(s)	711, 1440, 2352
Eco81I	CCTNAGG	1 cut(s)	2652
Eco88I	CYCGRG	2 cut(s)	300, 424
EcoICRI	GAGCTC	1 cut(s)	49
EcoNI	CCTNNNNNAGG	1 cut(s)	1422
EcoO109I	RGGNCCY	2 cut(s)	533, 1516
EcoRI	GAATTC	2 cut(s)	592, 1370
EcoRII	CCWGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
EcoRV	GATATC	2 cut(s)	1834, 2376
EcoT14I	CCWWGG	4 cut(s)	1401, 1451, 1469, 2466
EcoT22I	ATGCAT	3 cut(s)	889, 1618, 2361
EcoT38I	GRGCYC	2 cut(s)	51, 1273
ErhI	CCWWGG	4 cut(s)	1401, 1451, 1469, 2466
FaqI	GGGAC	4 cut(s)	30, 716, 1487, 2487
FauI	CCCGC	1 cut(s)	7
FauNDI	CATATG	1 cut(s)	2507
FbaI	TGATCA	2 cut(s)	819, 1675
FblI	GTMKAC	1 cut(s)	214
Fnu4HI	GCNGC	5 cut(s)	113, 1541, 1949, 2034, 2178
FokI	GGATG	8 cut(s)	320, 338, 1018, 1454, 1464, 1844, 1865, 2322
FriOI	GRGCYC	2 cut(s)	51, 1273
Fsp4HI	GCNGC	5 cut(s)	113, 1541, 1949, 2034, 2178
GlaI	GCGC	1 cut(s)	79
GluI	GCNGC	5 cut(s)	113, 1541, 1949, 2034, 2178
GsaI	CCCAGC	2 cut(s)	1736, 2405
GsuI	CTGGAG	2 cut(s)	362, 1623
HaeIII	GGCC	4 cut(s)	26, 1456, 1518, 2465
HapII	CCGG	3 cut(s)	27, 829, 1925
HgaI	GACGC	2 cut(s)	69, 393
HhaI	GCGC	1 cut(s)	80
Hin1I	GRCGYC	1 cut(s)	385
Hin6I	GCGC	1 cut(s)	78
HinP1I	GCGC	1 cut(s)	78
HincII	GTYRAC	3 cut(s)	215, 616, 903
HindII	GTYRAC	3 cut(s)	215, 616, 903
HindIII	AAGCTT	1 cut(s)	2534
HpaI	GTTAAC	1 cut(s)	903
HpaII	CCGG	3 cut(s)	27, 829, 1925
HphI	GGTGA	7 cut(s)	145, 155, 182, 494, 740, 863, 2154
Hpy166II	GTNNAC	6 cut(s)	215, 574, 616, 903, 1144, 2572
Hpy8I	GTNNAC	6 cut(s)	215, 574, 616, 903, 1144, 2572
HpyAV	CCTTC	9 cut(s)	464, 629, 686, 704, 1335, 1418, 2090, 2230, 2636
HpyF10VI	GCNNNNNNNGC	7 cut(s)	264, 752, 1220, 1397, 1613, 2494, 2523
HpyF3I	CTNAG	9 cut(s)	1007, 1275, 1501, 1770, 1935, 2130, 2140, 2489, 2652
Hsp92I	GRCGYC	1 cut(s)	385
HspAI	GCGC	1 cut(s)	78
KpnI	GGTACC	1 cut(s)	1238
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Ksp22I	TGATCA	2 cut(s)	819, 1675
KspAI	GTTAAC	1 cut(s)	903
LguI	GCTCTTC	1 cut(s)	2129
LmnI	GCTCC	4 cut(s)	1027, 1048, 1604, 2425
Lsp1109I	GCAGC	5 cut(s)	99, 1527, 1960, 2045, 2189
LweI	GCATC	9 cut(s)	394, 657, 742, 783, 874, 1378, 1597, 1866, 2346
MaeIII	GTNAC	2 cut(s)	1505, 2326
MbiI	CCGCTC	1 cut(s)	235
MflI	RGATCY	3 cut(s)	541, 1072, 2313
MhlI	GDGCHC	2 cut(s)	51, 1273
MluCI	AATT	7 cut(s)	85, 355, 447, 592, 1370, 2304, 2481
MlyI	GAGTC	4 cut(s)	304, 778, 862, 2110
MmeI	TCCRAC	3 cut(s)	133, 1409, 2351
Mph1103I	ATGCAT	3 cut(s)	889, 1618, 2361
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	8 cut(s)	902, 975, 1307, 1704, 2067, 2342, 2352, 2409
MslI	CAYNNNNRTG	3 cut(s)	1052, 2186, 2364
MspCI	CTTAAG	1 cut(s)	1703
MspI	CCGG	3 cut(s)	27, 829, 1925
MspR9I	CCNGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
Mva1269I	GAATGC	2 cut(s)	1618, 2202
MvaI	CCWGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
MvnI	CGCG	2 cut(s)	80, 547
MwoI	GCNNNNNNNGC	7 cut(s)	264, 752, 1220, 1397, 1613, 2494, 2523
NaeI	GCCGGC	1 cut(s)	28
NcoI	CCATGG	1 cut(s)	1451
NdeI	CATATG	1 cut(s)	2507
NgoMIV	GCCGGC	1 cut(s)	26
NheI	GCTAGC	1 cut(s)	2668
NmuCI	GTSAC	2 cut(s)	1505, 2326
NsiI	ATGCAT	3 cut(s)	889, 1618, 2361
NspI	RCATGY	4 cut(s)	2252, 2363, 2392, 2676
PaeI	GCATGC	2 cut(s)	2363, 2392
PaeR7I	CTCGAG	2 cut(s)	300, 424
PagI	TCATGA	1 cut(s)	1722
PciI	ACATGT	1 cut(s)	2248
PciSI	GCTCTTC	1 cut(s)	2129
PcsI	WCGNNNNNNNCGW	1 cut(s)	1570
PctI	GAATGC	2 cut(s)	1618, 2202
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	9 cut(s)	58, 68, 97, 434, 487, 1196, 1581, 1621, 2048
PflFI	GACNNNGTC	1 cut(s)	1148
PflMI	CCANNNNNTGG	2 cut(s)	1457, 1739
PfoI	TCCNGGA	1 cut(s)	1480
PkrI	GCNGC	5 cut(s)	114, 1542, 1950, 2035, 2179
PleI	GAGTC	4 cut(s)	303, 777, 862, 2110
PpsI	GAGTC	4 cut(s)	303, 777, 862, 2110
PpuMI	RGGWCCY	1 cut(s)	533
PscI	ACATGT	1 cut(s)	2248
Psp124BI	GAGCTC	1 cut(s)	51
Psp5II	RGGWCCY	1 cut(s)	533
Psp6I	CCWGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
PspFI	CCCAGC	2 cut(s)	1732, 2401
PspGI	CCWGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
PspPI	GGNCC	7 cut(s)	533, 574, 1474, 1516, 1729, 1865, 2463
PspPPI	RGGWCCY	1 cut(s)	533
PspXI	VCTCGAGB	1 cut(s)	300
PstNI	CAGNNNCTG	1 cut(s)	167
PsuI	RGATCY	3 cut(s)	541, 1072, 2313
PsyI	GACNNNGTC	1 cut(s)	1148
RsaI	GTAC	2 cut(s)	1066, 1236
RsaNI	GTAC	2 cut(s)	1065, 1235
RseI	CAYNNNNRTG	3 cut(s)	1052, 2186, 2364
SacI	GAGCTC	1 cut(s)	51
SalI	GTCGAC	1 cut(s)	213
SapI	GCTCTTC	1 cut(s)	2129
SaqAI	TTAA	8 cut(s)	902, 975, 1307, 1704, 2067, 2342, 2352, 2409
SatI	GCNGC	5 cut(s)	113, 1541, 1949, 2034, 2178
Sau96I	GGNCC	7 cut(s)	533, 574, 1474, 1516, 1729, 1865, 2463
SchI	GAGTC	4 cut(s)	304, 778, 862, 2110
ScrFI	CCNGG	7 cut(s)	251, 940, 1458, 1482, 1493, 1578, 1862
SduI	GDGCHC	2 cut(s)	51, 1273
SfaNI	GCATC	9 cut(s)	394, 657, 742, 783, 874, 1378, 1597, 1866, 2346
Sfr274I	CTCGAG	2 cut(s)	300, 424
SinI	GGWCC	5 cut(s)	533, 574, 1474, 1729, 1865
SlaI	CTCGAG	2 cut(s)	300, 424
SmiMI	CAYNNNNRTG	3 cut(s)	1052, 2186, 2364
SmlI	CTYRAG	4 cut(s)	300, 424, 1703, 2719
SmoI	CTYRAG	4 cut(s)	300, 424, 1703, 2719
SpeI	ACTAGT	1 cut(s)	677
SphI	GCATGC	2 cut(s)	2363, 2392
Sse9I	AATT	7 cut(s)	85, 355, 447, 592, 1370, 2304, 2481
SsiI	CCGC	5 cut(s)	14, 235, 545, 1214, 2207
SstI	GAGCTC	1 cut(s)	51
StyD4I	CCNGG	7 cut(s)	249, 938, 1456, 1480, 1491, 1576, 1860
StyI	CCWWGG	4 cut(s)	1401, 1451, 1469, 2466
TaqI	TCGA	9 cut(s)	214, 301, 425, 948, 1386, 1546, 1624, 1668, 2458
TasI	AATT	7 cut(s)	85, 355, 447, 592, 1370, 2304, 2481
TatI	WGTACW	1 cut(s)	1064
TfiI	GAWTC	9 cut(s)	58, 68, 97, 434, 487, 1196, 1581, 1621, 2048
Tru1I	TTAA	8 cut(s)	902, 975, 1307, 1704, 2067, 2342, 2352, 2409
Tru9I	TTAA	8 cut(s)	902, 975, 1307, 1704, 2067, 2342, 2352, 2409
TseFI	GTSAC	2 cut(s)	1505, 2326
TseI	GCWGC	5 cut(s)	112, 1540, 1948, 2033, 2177
Tsp45I	GTSAC	2 cut(s)	1505, 2326
TspGWI	ACGGA	1 cut(s)	2060
Tth111I	GACNNNGTC	1 cut(s)	1148
Van91I	CCANNNNNTGG	2 cut(s)	1457, 1739
Vha464I	CTTAAG	1 cut(s)	1703
VpaK11BI	GGWCC	5 cut(s)	533, 574, 1474, 1729, 1865
XagI	CCTNNNNNAGG	1 cut(s)	1422
XapI	RAATTY	4 cut(s)	85, 592, 1370, 2481
XceI	RCATGY	4 cut(s)	2252, 2363, 2392, 2676
XcmI	CCANNNNNNNNNTGG	4 cut(s)	16, 71, 1126, 2068
XhoI	CTCGAG	2 cut(s)	300, 424
XmaJI	CCTAGG	1 cut(s)	1469
XmiI	GTMKAC	1 cut(s)	214
XmnI	GAANNNNTTC	1 cut(s)	350
Zsp2I	ATGCAT	3 cut(s)	889, 1618, 2361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.