Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011804

Physical Location & Seq

Genomic Coordinates Reverse (-)

7787145 .. 7791594

Gene Structure 4450 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGGCGGGAAACGACTGGGTGAACAGTTACTTGGAGGCGATCCTTGACGTCGGTCCGGGCCTCGACGACGCCAAATCGTCGCTGCTCCTCCGTGAACGCGGCCGTTTCAGTCCGACTCGTTACTTCGTCGAAGAGGTCATCACTCGCTACGATGAGACCGATCTCCACCGCTCCTGGGTTCGGGCTGCGGCGACGGCGAGGAGTCCGGAGGAGAGGAACACCAGGTTGGAGAACATGTGCTGGCGGATTTGGAATTTGGCTCGCAAAAAGAAGCAGATTGAGGGAGAAGAAGCTCAGCGTGTGGCCAGACATCGTCTTGAAAGGGAACGAGGCAGGAGAGAAGCGACTGAGGATATGTCAGAAGACTTGTCTGAGGGAGAGAAGGGAGACACGGTTGGTGACATTTCAGCTCATGGTGGTGATAGCACTAGAGGAGGAAGAATGAAAAGAATCAATTCTACTGATGCAGTGGAGAACTGGACTAGTCAACAAAAAGAACAGAAATTCTACATGGTGTTAATAAGCCTTCATGGCCTGATCCGTGGCGAGAACATGGAGCTTGGTCGTGATTCTGATACTGGTGGCCAGGTCAAGTACGTAGTAGAACTTGCCAGGGCCTTAGGTTCAATGCCTGGAGTTTATCGGGTTGATTTGCTAACAAGACAAGTGGCAGCTCCAGATGTGGATTGGAGTTATGGGGAACCAACTGAAATGCTGAATCCATTAAACACTGAGAATTCAAAGGAGGAGCTTGGGGAGAGTAGTGGAGCTTATATAGTCCGGATACCATTTGGCCCAAGAGATAAATATGTTCCAAAAGAACTCCTTTGGCCTCACATACCTGAGTTTGTTGATGGTGCACTTACCCACATTCTACAGATGTCTAAAGCTCTGGGAGAGCAAATTGGAGGTGGGCAACCAGTTTGGCCCGTCGCAATTCATGGACATTATGCAGATGCAGGTGATTCTGCTGCTCTTATATCTGGTGCCTTGAATGTCCCAATGGTATTTACTGGTCACTCACTTGGACGAGATAAGCTTGAACAACTTTTGAAACAAGGACGTCAATCAAGAGAAGAAATAAATACAACGTACAAAATAATGAGACGGATAGAAGCAGAGGAGTTAACCCTAGATGCCTCTGAGATTGTTATCACAAGCACTAGACAGGAGATAGACTCACAATGGCGCTTGTATGATGGCTTTGATCCAATACTAGAACGCAAACTAAGAGCAAGAATCAAAAGGGGTGTAAGCTGTCATGGCAGGTTTATGCCTCGCATGGTTGTAATACCTCCAGGAATGGAGTTTCATCATATTATTCCACATGATGGCGACGGGGATGGTGAAGGGGAAAGACATGATGATAGTTCTACTTCTCCTGACCCGCCAATTTGGTCGGAGATCATGCGTTTCTTTACCAATCCACGGAAGCCTATGATACTTGCCCTTGCCAGGGCAGACCCTAAAAAGAATATTACGACCTTAGTCAAAGCATTTGGAGAGTGTCGCCCACTGAGGGAACTTGCAAACCTTACATTGATAATGGGAAACCGTGATGACATTGATGAAATGTCCAGCACAAATGCATCTGTGCTTCTTTCCATTCTTAAGCTGATTGACAGATACGATCTTTACGGTCATGTGGCATATCCGAAACACCACAAGCAGTCTGATGTTCCTGACATTTATCGTCTGGCAGCAAAGACAAAGGGTGTTTTCATCAATCCAGCTTTCATTGAGCCATTTGGACTTACTTTAATTGAGGCAGCAGCTCACGGCTTACCTATTGTTGCCACACAAAATGGGGGTCCTGTTGATATTCATCGGGTTCTTGACAATGGTCTACTAGTTGACCCCCATGATCAACAATTAATAGCGGATGCCCTTCTGAAGCTTGTTTCGGACAAGCAACTTTGGGCAAGATGCAGGCAGAATGGACTGAAAAACATTCACCTTTTCTCATGGCCAGAGCATTGTAAGACATACTTAACTCGCATAACCAGTTGCAAACCAAGGCAGCCACAGTGGCAAAGAAATGAAGCTGACTTTGACAATTCACAACACGATTCACCTAGTGATTCTTTGAGGGATATACAAGATATATCTTTGAACTTGAAACTCTCACTGGATGGCGACAAAACTGAAGGGAGTGCTGCTCTTGATAATGCTTTAGAGACTGAAGATCGTGCTGCTGGAGGGAAGATTAAGGAGCAAAATGCGGTTTTGACATTGTCAAAAGGTGTTTGTGAAAAGGCTGGTTCCACAGAGAAAGCAGACAACAGTTCTGGGGCTGGTAAATTTCCAGCATTCAGGAAAAGGAAGTATGTTTATGTAATTGCTGTGGATTGTGATACAACCTCAGAGTTTACTGATCGATCATTGAGAAGGTTACTGAGGCAGCAGAGAAGAACAAAGATGCAGGACCTATCGGATTTATACTATCAACAGCATTGGGCATATCTGAGATACATACTCTTTTGGTCTCAGGAGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008194 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0016020 GO:0016043 GO:0016740 GO:0016757 GO:0016758 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0035251 GO:0043062 GO:0044085 GO:0044464 GO:0045229 GO:0046524 GO:0046527 GO:0046903 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0071836 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 S6PP Sucrose_synth

Protein Analysis

833

Amino Acids

94.07

Weight (kDa)

6.16

Isoelectric Point (pI)

46.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GT-B_Sucrose_synth	PF00862	168 - 437	6.5e-10	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	475 - 648	5.4e-23	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	479 - 636	1.8e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11110
fragaria_vesca	FvH4_2g28820 FvH4_2g28820
malus_domestica	MD08G1157000.v1.1 MD15G1127900.v1.1
prunus_persica	Prupe.1G483200_v2.0.a1 Prupe.1G483200_v2.0.a1
pyrus_communis	pycom08g12930 pycom15g11500
rosa_chinensis	RchiOBHm_Chr6g0297571
rosa_laevigata	RLG00000011582
rosa_roxburghii	Rroxscaffold_7G00170350
rosa_rugosa	Rorug06G0273700 Rorug06G0273800 Rorug06G0273800
rosa_samantha	Rh6BG392800 Rh6CG398600 Rh6DG385200
rosa_wichuraiana	Rw6G033510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	950
AatII	GACGTC	2 cut(s)	51, 1066
Acc36I	ACCTGC	2 cut(s)	950, 1257
AccB1I	GGYRCC	1 cut(s)	986
AccB7I	CCANNNNNTGG	1 cut(s)	1331
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	1846
AccII	CGCG	1 cut(s)	99
AccIII	TCCGGA	2 cut(s)	205, 780
AciI	CCGC	8 cut(s)	5, 99, 169, 188, 244, 1388, 1880, 2222
AclWI	GGATC	3 cut(s)	34, 532, 1202
AcoI	YGGCCR	4 cut(s)	100, 303, 583, 1967
AcsI	RAATTY	4 cut(s)	253, 503, 736, 2300
AcuI	CTGAAG	3 cut(s)	1913, 2166, 2202
AcyI	GRCGYC	3 cut(s)	48, 69, 1063
AdeI	CACNNNGTG	1 cut(s)	2078
AfaI	GTAC	2 cut(s)	596, 1094
AfiI	CCNNNNNNNGG	7 cut(s)	175, 180, 1331, 1428, 1455, 1456, 1519
AflII	CTTAAG	1 cut(s)	1610
AflIII	ACRYGT	1 cut(s)	234
AgsI	TTSAA	8 cut(s)	320, 627, 741, 994, 1043, 1054, 2113, 2119
AhlI	ACTAGT	2 cut(s)	482, 1849
AjnI	CCWGG	7 cut(s)	173, 221, 585, 611, 631, 1297, 1454
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 209, 241
Alw21I	GWGCWC	1 cut(s)	862
Alw26I	GTCTC	5 cut(s)	149, 381, 1099, 2171, 2490
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	3 cut(s)	34, 532, 1202
Aor13HI	TCCGGA	2 cut(s)	205, 780
ApaLI	GTGCAC	1 cut(s)	858
ApoI	RAATTY	4 cut(s)	253, 503, 736, 2300
ArsI	GACNNNNNNTTYG	2 cut(s)	1795, 1827
AseI	ATTAAT	1 cut(s)	1874
Asp700I	GAANNNNTTC	1 cut(s)	454
AspLEI	GCGC	1 cut(s)	1191
AspS9I	GGNCC	7 cut(s)	53, 58, 615, 794, 927, 1811, 2425
AsuC2I	CCSGG	1 cut(s)	57
AsuHPI	GGTGA	7 cut(s)	31, 410, 431, 974, 1358, 1946, 2064
AvaII	GGWCC	3 cut(s)	53, 1811, 2425
AxyI	CCTNAGG	1 cut(s)	619
BaeGI	GKGCMC	1 cut(s)	862
BalI	TGGCCA	3 cut(s)	305, 585, 1969
BanI	GGYRCC	1 cut(s)	986
BbsI	GAAGAC	1 cut(s)	369
Bbv12I	GWGCWC	1 cut(s)	862
BccI	CCATC	5 cut(s)	848, 1193, 1325, 1337, 2126
BceAI	ACGGC	3 cut(s)	87, 210, 1795
BciT130I	CCWGG	7 cut(s)	175, 223, 587, 613, 633, 1299, 1456
BciVI	GTATCC	1 cut(s)	777
BclI	TGATCA	1 cut(s)	1864
BcnI	CCSGG	1 cut(s)	57
BcoDI	GTCTC	5 cut(s)	149, 381, 1099, 2171, 2490
BcuI	ACTAGT	2 cut(s)	482, 1849
BfaI	CTAG	7 cut(s)	429, 483, 1133, 1164, 1217, 1850, 2076
BfmI	CTRYAG	1 cut(s)	875
BfoI	RGCGCY	1 cut(s)	1192
BfrI	CTTAAG	1 cut(s)	1610
BfuAI	ACCTGC	2 cut(s)	950, 1257
BfuI	GTATCC	1 cut(s)	777
BglI	GCCNNNNNGGC	2 cut(s)	531, 2029
BlpI	GCTNAGC	1 cut(s)	294
Bme1390I	CCNGG	8 cut(s)	57, 175, 223, 587, 613, 633, 1299, 1456
Bme18I	GGWCC	3 cut(s)	53, 1811, 2425
BmgT120I	GGNCC	7 cut(s)	53, 58, 615, 794, 927, 1811, 2425
BmiI	GGNNCC	4 cut(s)	702, 988, 1812, 2263
BmrFI	CCNGG	8 cut(s)	57, 175, 223, 587, 613, 633, 1299, 1456
BmrI	ACTGGG	1 cut(s)	25
BmsI	GCATC	7 cut(s)	454, 946, 1126, 1598, 1873, 1916, 2409
BmuI	ACTGGG	1 cut(s)	25
BoxI	GACNNNNGTC	3 cut(s)	51, 1487, 1842
BpiI	GAAGAC	1 cut(s)	369
BplI	GAGNNNNNCTC	4 cut(s)	1163, 1195, 2143, 2175
BpmI	CTGGAG	4 cut(s)	654, 660, 1281, 2217
Bpu1102I	GCTNAGC	1 cut(s)	294
BpuMI	CCSGG	1 cut(s)	57
Bsa29I	ATCGAT	1 cut(s)	2377
BsaAI	YACGTR	1 cut(s)	598
BsaBI	GATNNNNATC	2 cut(s)	1151, 1824
BsaHI	GRCGYC	3 cut(s)	48, 69, 1063
BsaI	GGTCTC	2 cut(s)	149, 2490
BsaJI	CCNNGG	6 cut(s)	174, 541, 612, 1427, 1455, 2015
BsaWI	WCCGGW	2 cut(s)	205, 780
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 378, 408
Bsc4I	CCNNNNNNNGG	7 cut(s)	175, 180, 1331, 1428, 1455, 1456, 1519
Bse1I	ACTGG	7 cut(s)	20, 482, 583, 920, 1018, 2004, 2133
Bse21I	CCTNAGG	1 cut(s)	619
Bse8I	GATNNNNATC	2 cut(s)	1151, 1824
BseAI	TCCGGA	2 cut(s)	205, 780
BseBI	CCWGG	7 cut(s)	175, 223, 587, 613, 633, 1299, 1456
BseCI	ATCGAT	1 cut(s)	2377
BseDI	CCNNGG	6 cut(s)	174, 541, 612, 1427, 1455, 2015
BseGI	GGATG	3 cut(s)	1348, 1888, 2137
BseJI	GATNNNNATC	2 cut(s)	1151, 1824
BseLI	CCNNNNNNNGG	7 cut(s)	175, 180, 1331, 1428, 1455, 1456, 1519
BseNI	ACTGG	7 cut(s)	20, 482, 583, 920, 1018, 2004, 2133
BseRI	GAGGAG	6 cut(s)	77, 214, 224, 447, 761, 1136
BseSI	GKGCMC	1 cut(s)	862
BseX3I	CGGCCG	1 cut(s)	100
Bsh1236I	CGCG	1 cut(s)	99
Bsh1285I	CGRYCG	1 cut(s)	103
BshNI	GGYRCC	1 cut(s)	986
BshVI	ATCGAT	1 cut(s)	2377
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	1 cut(s)	862
BsiSI	CCGG	3 cut(s)	56, 206, 781
BslFI	GGGAC	1 cut(s)	983
BslI	CCNNNNNNNGG	7 cut(s)	175, 180, 1331, 1428, 1455, 1456, 1519
BsmAI	GTCTC	5 cut(s)	149, 381, 1099, 2171, 2490
BsmBI	CGTCTC	1 cut(s)	1099
BsmFI	GGGAC	1 cut(s)	983
BsmI	GAATGC	1 cut(s)	2309
Bso31I	GGTCTC	2 cut(s)	149, 2490
Bsp1286I	GDGCHC	1 cut(s)	862
Bsp13I	TCCGGA	2 cut(s)	205, 780
Bsp1720I	GCTNAGC	1 cut(s)	294
BspACI	CCGC	8 cut(s)	5, 99, 169, 188, 244, 1388, 1880, 2222
BspDI	ATCGAT	1 cut(s)	2377
BspEI	TCCGGA	2 cut(s)	205, 780
BspFNI	CGCG	1 cut(s)	99
BspLI	GGNNCC	4 cut(s)	702, 988, 1812, 2263
BspMI	ACCTGC	2 cut(s)	950, 1257
BspPI	GGATC	3 cut(s)	34, 532, 1202
BspT107I	GGYRCC	1 cut(s)	986
BspTI	CTTAAG	1 cut(s)	1610
BspTNI	GGTCTC	2 cut(s)	149, 2490
BsrBI	CCGCTC	1 cut(s)	171
BsrI	ACTGG	7 cut(s)	20, 482, 583, 920, 1018, 2004, 2133
BssECI	CCNNGG	6 cut(s)	174, 541, 612, 1427, 1455, 2015
BssNI	GRCGYC	3 cut(s)	48, 69, 1063
BssT1I	CCWWGG	1 cut(s)	2015
Bst2UI	CCWGG	7 cut(s)	175, 223, 587, 613, 633, 1299, 1456
Bst4CI	ACNGT	6 cut(s)	26, 394, 1556, 1640, 2028, 2285
Bst6I	CTCTTC	1 cut(s)	126
BstACI	GRCGYC	3 cut(s)	48, 69, 1063
BstAFI	CTTAAG	1 cut(s)	1610
BstBAI	YACGTR	1 cut(s)	598
BstC8I	GCNNGC	3 cut(s)	242, 262, 1931
BstDSI	CCRYGG	2 cut(s)	541, 1427
BstF5I	GGATG	3 cut(s)	1348, 1888, 2137
BstFNI	CGCG	1 cut(s)	99
BstH2I	RGCGCY	1 cut(s)	1192
BstHHI	GCGC	1 cut(s)	1191
BstMAI	GTCTC	5 cut(s)	149, 381, 1099, 2171, 2490
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	4 cut(s)	194, 531, 1263, 2029
BstNI	CCWGG	7 cut(s)	175, 223, 587, 613, 633, 1299, 1456
BstNSI	RCATGY	1 cut(s)	238
BstPAI	GACNNNNGTC	3 cut(s)	51, 1487, 1842
BstSCI	CCNGG	8 cut(s)	55, 173, 221, 585, 611, 631, 1297, 1454
BstSFI	CTRYAG	1 cut(s)	875
BstSLI	GKGCMC	1 cut(s)	862
BstSNI	TACGTA	1 cut(s)	598
BstUI	CGCG	1 cut(s)	99
BstV2I	GAAGAC	1 cut(s)	369
BstZI	CGGCCG	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	2377
Bsu36I	CCTNAGG	1 cut(s)	619
BsuI	GTATCC	1 cut(s)	777
BsuTUI	ATCGAT	1 cut(s)	2377
BtgI	CCRYGG	2 cut(s)	541, 1427
BtsCI	GGATG	3 cut(s)	1348, 1888, 2137
BtsI	GCAGTG	1 cut(s)	474
BtsIMutI	CAGTG	5 cut(s)	474, 729, 1514, 2033, 2126
BveI	ACCTGC	2 cut(s)	950, 1257
Cac8I	GCNNGC	3 cut(s)	242, 262, 1931
CfoI	GCGC	1 cut(s)	1191
Cfr13I	GGNCC	7 cut(s)	53, 58, 615, 794, 927, 1811, 2425
ClaI	ATCGAT	1 cut(s)	2377
CpoI	CGGWCCG	1 cut(s)	53
CseI	GACGC	1 cut(s)	77
CsiI	ACCWGGT	1 cut(s)	221
Csp6I	GTAC	2 cut(s)	595, 1093
CspCI	CAANNNNNGTGG	2 cut(s)	648, 683
CspI	CGGWCCG	1 cut(s)	53
CviQI	GTAC	2 cut(s)	595, 1093
DraIII	CACNNNGTG	1 cut(s)	2078
EaeI	YGGCCR	4 cut(s)	100, 303, 583, 1967
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
EciI	GGCGGA	1 cut(s)	259
EclXI	CGGCCG	1 cut(s)	100
Eco105I	TACGTA	1 cut(s)	598
Eco130I	CCWWGG	1 cut(s)	2015
Eco31I	GGTCTC	2 cut(s)	149, 2490
Eco47I	GGWCC	3 cut(s)	53, 1811, 2425
Eco52I	CGGCCG	1 cut(s)	100
Eco57I	CTGAAG	3 cut(s)	1913, 2166, 2202
Eco81I	CCTNAGG	1 cut(s)	619
EcoO109I	RGGNCCY	3 cut(s)	615, 1811, 2425
EcoRI	GAATTC	1 cut(s)	736
EcoRII	CCWGG	7 cut(s)	173, 221, 585, 611, 631, 1297, 1454
EcoT14I	CCWWGG	1 cut(s)	2015
EcoT22I	ATGCAT	1 cut(s)	1591
ErhI	CCWWGG	1 cut(s)	2015
Esp3I	CGTCTC	1 cut(s)	1099
FalI	AAGNNNNNCTT	4 cut(s)	810, 842, 1973, 2005
FaqI	GGGAC	1 cut(s)	983
FauI	CCCGC	1 cut(s)	1395
FbaI	TGATCA	1 cut(s)	1864
FblI	GTMKAC	1 cut(s)	1846
FokI	GGATG	3 cut(s)	1355, 1895, 2144
FspBI	CTAG	7 cut(s)	429, 483, 1133, 1164, 1217, 1850, 2076
GlaI	GCGC	1 cut(s)	1190
GsuI	CTGGAG	4 cut(s)	654, 660, 1281, 2217
HaeII	RGCGCY	1 cut(s)	1192
HapII	CCGG	3 cut(s)	56, 206, 781
HgaI	GACGC	1 cut(s)	77
HhaI	GCGC	1 cut(s)	1191
Hin1I	GRCGYC	3 cut(s)	48, 69, 1063
Hin6I	GCGC	1 cut(s)	1189
HinP1I	GCGC	1 cut(s)	1189
HincII	GTYRAC	3 cut(s)	488, 1128, 1855
HindII	GTYRAC	3 cut(s)	488, 1128, 1855
HindIII	AAGCTT	2 cut(s)	1037, 1895
HpaI	GTTAAC	1 cut(s)	1128
HpaII	CCGG	3 cut(s)	56, 206, 781
HphI	GGTGA	7 cut(s)	31, 410, 431, 974, 1358, 1946, 2064
Hpy166II	GTNNAC	8 cut(s)	22, 95, 488, 860, 1128, 1847, 1855, 2370
Hpy8I	GTNNAC	8 cut(s)	22, 95, 488, 860, 1128, 1847, 1855, 2370
Hpy99I	CGWCG	8 cut(s)	53, 68, 71, 82, 131, 196, 935, 1340
HpyAV	CCTTC	6 cut(s)	376, 536, 1343, 1898, 2141, 2382
HpyCH4III	ACNGT	6 cut(s)	26, 394, 1556, 1640, 2028, 2285
HpyCH4IV	ACGT	4 cut(s)	48, 597, 1063, 1091
HpyCH4V	TGCA	9 cut(s)	467, 860, 953, 959, 1529, 1589, 1929, 2010, 2422
HpyF10VI	GCNNNNNNNGC	4 cut(s)	194, 531, 1263, 2029
HpySE526I	ACGT	4 cut(s)	48, 597, 1063, 1091
Hsp92I	GRCGYC	3 cut(s)	48, 69, 1063
HspAI	GCGC	1 cut(s)	1189
Kpn2I	TCCGGA	2 cut(s)	205, 780
Ksp22I	TGATCA	1 cut(s)	1864
KspAI	GTTAAC	1 cut(s)	1128
LmnI	GCTCC	7 cut(s)	90, 176, 556, 679, 748, 767, 2212
LweI	GCATC	7 cut(s)	454, 946, 1126, 1598, 1873, 1916, 2409
MabI	ACCWGGT	1 cut(s)	221
MaeI	CTAG	7 cut(s)	429, 483, 1133, 1164, 1217, 1850, 2076
MaeII	ACGT	4 cut(s)	48, 597, 1063, 1091
MaeIII	GTNAC	5 cut(s)	26, 119, 398, 1016, 2391
MbiI	CCGCTC	1 cut(s)	171
MboII	GAAGA	8 cut(s)	143, 299, 374, 450, 1088, 2195, 2215, 2421
MhlI	GDGCHC	1 cut(s)	862
MlsI	TGGCCA	3 cut(s)	305, 585, 1969
MluNI	TGGCCA	3 cut(s)	305, 585, 1969
MlyI	GAGTC	3 cut(s)	109, 211, 1172
MmeI	TCCRAC	3 cut(s)	137, 207, 1380
Mox20I	TGGCCA	3 cut(s)	305, 585, 1969
Mph1103I	ATGCAT	1 cut(s)	1591
MroI	TCCGGA	2 cut(s)	205, 780
MroXI	GAANNNNTTC	1 cut(s)	454
MscI	TGGCCA	3 cut(s)	305, 585, 1969
MseI	TTAA	8 cut(s)	518, 725, 1127, 1611, 1760, 1874, 1991, 2208
MslI	CAYNNNNRTG	1 cut(s)	417
Msp20I	TGGCCA	3 cut(s)	305, 585, 1969
MspCI	CTTAAG	1 cut(s)	1610
MspI	CCGG	3 cut(s)	56, 206, 781
MspR9I	CCNGG	8 cut(s)	57, 175, 223, 587, 613, 633, 1299, 1456
Mva1269I	GAATGC	1 cut(s)	2309
MvaI	CCWGG	7 cut(s)	175, 223, 587, 613, 633, 1299, 1456
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	4 cut(s)	194, 531, 1263, 2029
NciI	CCSGG	1 cut(s)	57
NlaIV	GGNNCC	4 cut(s)	702, 988, 1812, 2263
NmuCI	GTSAC	2 cut(s)	398, 1016
NsiI	ATGCAT	1 cut(s)	1591
NspI	RCATGY	1 cut(s)	238
PaqCI	CACCTGC	1 cut(s)	950
PciI	ACATGT	1 cut(s)	234
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PctI	GAATGC	1 cut(s)	2309
PdmI	GAANNNNTTC	1 cut(s)	454
PfeI	GAWTC	7 cut(s)	450, 569, 718, 965, 1239, 2069, 2081
PflFI	GACNNNGTC	2 cut(s)	312, 2233
PflMI	CCANNNNNTGG	1 cut(s)	1331
PfoI	TCCNGGA	1 cut(s)	1297
PleI	GAGTC	3 cut(s)	109, 210, 1172
PpsI	GAGTC	3 cut(s)	109, 210, 1172
Ppu21I	YACGTR	1 cut(s)	598
PpuMI	RGGWCCY	2 cut(s)	1811, 2425
PscI	ACATGT	1 cut(s)	234
PshAI	GACNNNNGTC	3 cut(s)	51, 1487, 1842
PshBI	ATTAAT	1 cut(s)	1874
Psp5II	RGGWCCY	2 cut(s)	1811, 2425
Psp6I	CCWGG	7 cut(s)	173, 221, 585, 611, 631, 1297, 1454
PspGI	CCWGG	7 cut(s)	173, 221, 585, 611, 631, 1297, 1454
PspN4I	GGNNCC	4 cut(s)	702, 988, 1812, 2263
PspPI	GGNCC	7 cut(s)	53, 58, 615, 794, 927, 1811, 2425
PspPPI	RGGWCCY	2 cut(s)	1811, 2425
PsyI	GACNNNGTC	2 cut(s)	312, 2233
RsaI	GTAC	2 cut(s)	596, 1094
RsaNI	GTAC	2 cut(s)	595, 1093
RseI	CAYNNNNRTG	1 cut(s)	417
Rsr2I	CGGWCCG	1 cut(s)	53
RsrII	CGGWCCG	1 cut(s)	53
SaqAI	TTAA	8 cut(s)	518, 725, 1127, 1611, 1760, 1874, 1991, 2208
Sau96I	GGNCC	7 cut(s)	53, 58, 615, 794, 927, 1811, 2425
SchI	GAGTC	3 cut(s)	109, 211, 1172
ScrFI	CCNGG	8 cut(s)	57, 175, 223, 587, 613, 633, 1299, 1456
SduI	GDGCHC	1 cut(s)	862
SexAI	ACCWGGT	1 cut(s)	221
SfaNI	GCATC	7 cut(s)	454, 946, 1126, 1598, 1873, 1916, 2409
SfcI	CTRYAG	1 cut(s)	875
SinI	GGWCC	3 cut(s)	53, 1811, 2425
SmiMI	CAYNNNNRTG	1 cut(s)	417
SmlI	CTYRAG	1 cut(s)	1610
SmoI	CTYRAG	1 cut(s)	1610
SnaBI	TACGTA	1 cut(s)	598
SpeI	ACTAGT	2 cut(s)	482, 1849
SsiI	CCGC	8 cut(s)	5, 99, 169, 188, 244, 1388, 1880, 2222
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	7 cut(s)	429, 483, 1133, 1164, 1217, 1850, 2076
StyD4I	CCNGG	8 cut(s)	55, 173, 221, 585, 611, 631, 1297, 1454
StyI	CCWWGG	1 cut(s)	2015
TaaI	ACNGT	6 cut(s)	26, 394, 1556, 1640, 2028, 2285
TaiI	ACGT	4 cut(s)	51, 600, 1066, 1094
TaqI	TCGA	3 cut(s)	63, 129, 2377
TaqII	GACCGA	2 cut(s)	41, 173
TauI	GCSGC	2 cut(s)	102, 191
TfiI	GAWTC	7 cut(s)	450, 569, 718, 965, 1239, 2069, 2081
Tru1I	TTAA	8 cut(s)	518, 725, 1127, 1611, 1760, 1874, 1991, 2208
Tru9I	TTAA	8 cut(s)	518, 725, 1127, 1611, 1760, 1874, 1991, 2208
TscAI	CASTG	5 cut(s)	474, 736, 1521, 2033, 2133
TseFI	GTSAC	2 cut(s)	398, 1016
Tsp45I	GTSAC	2 cut(s)	398, 1016
TspDTI	ATGAA	9 cut(s)	458, 518, 929, 1301, 1584, 1711, 1726, 1814, 2055
TspGWI	ACGGA	4 cut(s)	80, 530, 1123, 1444
TspRI	CASTG	5 cut(s)	474, 736, 1521, 2033, 2133
Tth111I	GACNNNGTC	2 cut(s)	312, 2233
Van91I	CCANNNNNTGG	1 cut(s)	1331
Vha464I	CTTAAG	1 cut(s)	1610
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	3 cut(s)	53, 1811, 2425
VspI	ATTAAT	1 cut(s)	1874
XapI	RAATTY	4 cut(s)	253, 503, 736, 2300
XceI	RCATGY	1 cut(s)	238
XcmI	CCANNNNNNNNNTGG	1 cut(s)	684
XmiI	GTMKAC	1 cut(s)	1846
XmnI	GAANNNNTTC	1 cut(s)	454
XspI	CTAG	7 cut(s)	429, 483, 1133, 1164, 1217, 1850, 2076
ZraI	GACGTC	2 cut(s)	49, 1064
Zsp2I	ATGCAT	1 cut(s)	1591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.