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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16610 AT5G16610 AT5G16610 |
| fragaria_vesca | FvH4_1g25400 |
| malus_domestica | MD15G1138100.v1.1 |
| prunus_persica | Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 |
| pyrus_communis | pycom15g12440 |
| rosa_chinensis | RchiOBHm_Chr2g0123431 |
| rosa_laevigata | RLG00000018748 RLG00000018755 |
| rosa_multiflora | Rmu_sc0005876.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00120670 |
| rosa_rugosa | Rorug02G0245500 Rorug02G0245600 Rorug02G0245700 Rorug02G0245800 |
| rosa_samantha | Rh2AG304400 Rh2BG312400 Rh2CG290900 Rh2DG328400 |
| rosa_wichuraiana | Rw2G024370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 787 |
| AccB1I | GGYRCC | 1 cut(s) | 1059 |
| AccIII | TCCGGA | 1 cut(s) | 472 |
| AciI | CCGC | 3 cut(s) | 574, 669, 884 |
| AcoI | YGGCCR | 1 cut(s) | 1040 |
| AcuI | CTGAAG | 1 cut(s) | 1055 |
| AfaI | GTAC | 1 cut(s) | 1349 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 472, 1130, 1325, 1474 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 511, 1072 |
| AjnI | CCWGG | 4 cut(s) | 55, 784, 1194, 1290 |
| Alw21I | GWGCWC | 1 cut(s) | 1524 |
| Alw26I | GTCTC | 1 cut(s) | 1059 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 698 |
| Aor13HI | TCCGGA | 1 cut(s) | 472 |
| AoxI | GGCC | 3 cut(s) | 59, 1040, 1287 |
| ApeKI | GCWGC | 2 cut(s) | 4, 577 |
| AseI | ATTAAT | 1 cut(s) | 549 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 20, 178, 295 |
| AspLEI | GCGC | 1 cut(s) | 1194 |
| AspS9I | GGNCC | 3 cut(s) | 59, 1288, 1502 |
| AsuHPI | GGTGA | 2 cut(s) | 204, 1210 |
| AvaII | GGWCC | 1 cut(s) | 1502 |
| BanI | GGYRCC | 1 cut(s) | 1059 |
| BanII | GRGCYC | 2 cut(s) | 968, 1524 |
| BbsI | GAAGAC | 3 cut(s) | 454, 879, 1275 |
| Bbv12I | GWGCWC | 1 cut(s) | 1524 |
| BbvI | GCAGC | 1 cut(s) | 564 |
| BccI | CCATC | 1 cut(s) | 1424 |
| BceAI | ACGGC | 4 cut(s) | 780, 859, 913, 1002 |
| BciT130I | CCWGG | 4 cut(s) | 57, 786, 1196, 1292 |
| BcoDI | GTCTC | 1 cut(s) | 1059 |
| BfaI | CTAG | 3 cut(s) | 633, 1298, 1481 |
| BfmI | CTRYAG | 4 cut(s) | 243, 794, 1025, 1222 |
| BfoI | RGCGCY | 1 cut(s) | 1195 |
| BfuAI | ACCTGC | 1 cut(s) | 787 |
| BisI | GCNGC | 3 cut(s) | 5, 575, 578 |
| BlpI | GCTNAGC | 1 cut(s) | 702 |
| BlsI | GCNGC | 3 cut(s) | 6, 576, 579 |
| Bme1390I | CCNGG | 4 cut(s) | 57, 786, 1196, 1292 |
| Bme18I | GGWCC | 1 cut(s) | 1502 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 511, 1072 |
| BmgT120I | GGNCC | 3 cut(s) | 59, 1288, 1502 |
| BmiI | GGNNCC | 3 cut(s) | 1061, 1317, 1336 |
| BmrFI | CCNGG | 4 cut(s) | 57, 786, 1196, 1292 |
| BmsI | GCATC | 4 cut(s) | 611, 769, 944, 1483 |
| BpiI | GAAGAC | 3 cut(s) | 454, 879, 1275 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 319, 351 |
| BpmI | CTGGAG | 1 cut(s) | 768 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 702 |
| BpuEI | CTTGAG | 3 cut(s) | 952, 1328, 1482 |
| Bsa29I | ATCGAT | 1 cut(s) | 1428 |
| BsaI | GGTCTC | 1 cut(s) | 1059 |
| BsaJI | CCNNGG | 7 cut(s) | 56, 345, 446, 747, 960, 1290, 1351 |
| BsaWI | WCCGGW | 1 cut(s) | 472 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 472, 1130, 1325, 1474 |
| Bse118I | RCCGGY | 2 cut(s) | 122, 1042 |
| Bse1I | ACTGG | 2 cut(s) | 147, 1330 |
| Bse3DI | GCAATG | 1 cut(s) | 1212 |
| BseAI | TCCGGA | 1 cut(s) | 472 |
| BseBI | CCWGG | 4 cut(s) | 57, 786, 1196, 1292 |
| BseCI | ATCGAT | 1 cut(s) | 1428 |
| BseDI | CCNNGG | 7 cut(s) | 56, 345, 446, 747, 960, 1290, 1351 |
| BseGI | GGATG | 4 cut(s) | 445, 457, 650, 1464 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 472, 1130, 1325, 1474 |
| BseMI | GCAATG | 1 cut(s) | 1212 |
| BseMII | CTCAG | 2 cut(s) | 315, 705 |
| BseNI | ACTGG | 2 cut(s) | 147, 1330 |
| BseXI | GCAGC | 1 cut(s) | 564 |
| BseYI | CCCAGC | 1 cut(s) | 485 |
| BshFI | GGCC | 3 cut(s) | 61, 1042, 1289 |
| BshNI | GGYRCC | 1 cut(s) | 1059 |
| BshVI | ATCGAT | 1 cut(s) | 1428 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1524 |
| BsiSI | CCGG | 3 cut(s) | 123, 473, 1043 |
| BslFI | GGGAC | 2 cut(s) | 381, 1459 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 472, 1130, 1325, 1474 |
| BsmAI | GTCTC | 1 cut(s) | 1059 |
| BsmFI | GGGAC | 2 cut(s) | 381, 1459 |
| BsmI | GAATGC | 1 cut(s) | 336 |
| BsnI | GGCC | 3 cut(s) | 61, 1042, 1289 |
| Bso31I | GGTCTC | 1 cut(s) | 1059 |
| Bsp1286I | GDGCHC | 2 cut(s) | 968, 1524 |
| Bsp13I | TCCGGA | 1 cut(s) | 472 |
| Bsp143I | GATC | 2 cut(s) | 583, 1403 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 702 |
| Bsp19I | CCATGG | 1 cut(s) | 345 |
| BspACI | CCGC | 3 cut(s) | 574, 669, 884 |
| BspANI | GGCC | 3 cut(s) | 61, 1042, 1289 |
| BspCNI | CTCAG | 2 cut(s) | 316, 704 |
| BspDI | ATCGAT | 1 cut(s) | 1428 |
| BspEI | TCCGGA | 1 cut(s) | 472 |
| BspHI | TCATGA | 2 cut(s) | 157, 1366 |
| BspLI | GGNNCC | 3 cut(s) | 1061, 1317, 1336 |
| BspMAI | CTGCAG | 2 cut(s) | 798, 1029 |
| BspMI | ACCTGC | 1 cut(s) | 787 |
| BspT107I | GGYRCC | 1 cut(s) | 1059 |
| BspTNI | GGTCTC | 1 cut(s) | 1059 |
| BsrDI | GCAATG | 1 cut(s) | 1212 |
| BsrFI | RCCGGY | 2 cut(s) | 122, 1042 |
| BsrI | ACTGG | 2 cut(s) | 147, 1330 |
| BssAI | RCCGGY | 2 cut(s) | 122, 1042 |
| BssECI | CCNNGG | 7 cut(s) | 56, 345, 446, 747, 960, 1290, 1351 |
| BssMI | GATC | 2 cut(s) | 583, 1403 |
| BssT1I | CCWWGG | 3 cut(s) | 345, 446, 960 |
| Bst2UI | CCWGG | 4 cut(s) | 57, 786, 1196, 1292 |
| Bst4CI | ACNGT | 4 cut(s) | 66, 458, 513, 1352 |
| BstC8I | GCNNGC | 1 cut(s) | 90 |
| BstDEI | CTNAG | 3 cut(s) | 324, 691, 702 |
| BstDSI | CCRYGG | 3 cut(s) | 345, 747, 1351 |
| BstF5I | GGATG | 4 cut(s) | 445, 457, 650, 1464 |
| BstH2I | RGCGCY | 1 cut(s) | 1195 |
| BstHHI | GCGC | 1 cut(s) | 1194 |
| BstKTI | GATC | 2 cut(s) | 586, 1406 |
| BstMAI | GTCTC | 1 cut(s) | 1059 |
| BstMBI | GATC | 2 cut(s) | 583, 1403 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 140, 963, 1189 |
| BstNI | CCWGG | 4 cut(s) | 57, 786, 1196, 1292 |
| BstNSI | RCATGY | 1 cut(s) | 390 |
| BstSCI | CCNGG | 4 cut(s) | 55, 784, 1194, 1290 |
| BstSFI | CTRYAG | 4 cut(s) | 243, 794, 1025, 1222 |
| BstV1I | GCAGC | 1 cut(s) | 564 |
| BstV2I | GAAGAC | 3 cut(s) | 454, 879, 1275 |
| Bsu15I | ATCGAT | 1 cut(s) | 1428 |
| BsuRI | GGCC | 3 cut(s) | 61, 1042, 1289 |
| BsuTUI | ATCGAT | 1 cut(s) | 1428 |
| BtgI | CCRYGG | 3 cut(s) | 345, 747, 1351 |
| BtsCI | GGATG | 4 cut(s) | 445, 457, 650, 1464 |
| BtsIMutI | CAGTG | 1 cut(s) | 62 |
| BveI | ACCTGC | 1 cut(s) | 787 |
| Cac8I | GCNNGC | 1 cut(s) | 90 |
| CaiI | CAGNNNCTG | 1 cut(s) | 698 |
| CciI | TCATGA | 2 cut(s) | 157, 1366 |
| CfoI | GCGC | 1 cut(s) | 1194 |
| Cfr10I | RCCGGY | 2 cut(s) | 122, 1042 |
| Cfr13I | GGNCC | 3 cut(s) | 59, 1288, 1502 |
| ClaI | ATCGAT | 1 cut(s) | 1428 |
| CseI | GACGC | 1 cut(s) | 911 |
| Csp6I | GTAC | 1 cut(s) | 1348 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 268, 303, 1333, 1368 |
| CviAII | CATG | 7 cut(s) | 158, 346, 360, 387, 641, 1339, 1367 |
| CviQI | GTAC | 1 cut(s) | 1348 |
| DdeI | CTNAG | 3 cut(s) | 324, 691, 702 |
| DpnI | GATC | 2 cut(s) | 585, 1405 |
| DpnII | GATC | 2 cut(s) | 583, 1403 |
| DriI | GACNNNNNGTC | 2 cut(s) | 511, 1072 |
| EaeI | YGGCCR | 1 cut(s) | 1040 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 511, 1072 |
| EciI | GGCGGA | 1 cut(s) | 658 |
| Ecl136II | GAGCTC | 1 cut(s) | 1522 |
| Eco130I | CCWWGG | 3 cut(s) | 345, 446, 960 |
| Eco24I | GRGCYC | 2 cut(s) | 968, 1524 |
| Eco31I | GGTCTC | 1 cut(s) | 1059 |
| Eco47I | GGWCC | 1 cut(s) | 1502 |
| Eco53kI | GAGCTC | 1 cut(s) | 1522 |
| Eco57I | CTGAAG | 1 cut(s) | 1055 |
| EcoICRI | GAGCTC | 1 cut(s) | 1522 |
| EcoRII | CCWGG | 4 cut(s) | 55, 784, 1194, 1290 |
| EcoT14I | CCWWGG | 3 cut(s) | 345, 446, 960 |
| EcoT38I | GRGCYC | 2 cut(s) | 968, 1524 |
| ErhI | CCWWGG | 3 cut(s) | 345, 446, 960 |
| FaeI | CATG | 7 cut(s) | 161, 349, 363, 390, 644, 1342, 1370 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 485, 517, 961, 993 |
| FaqI | GGGAC | 2 cut(s) | 381, 1459 |
| FatI | CATG | 7 cut(s) | 157, 345, 359, 386, 640, 1338, 1366 |
| FauNDI | CATATG | 1 cut(s) | 570 |
| Fnu4HI | GCNGC | 3 cut(s) | 5, 575, 578 |
| FokI | GGATG | 4 cut(s) | 452, 464, 657, 1451 |
| FriOI | GRGCYC | 2 cut(s) | 968, 1524 |
| Fsp4HI | GCNGC | 3 cut(s) | 5, 575, 578 |
| FspBI | CTAG | 3 cut(s) | 633, 1298, 1481 |
| GlaI | GCGC | 1 cut(s) | 1193 |
| GluI | GCNGC | 3 cut(s) | 5, 575, 578 |
| GsaI | CCCAGC | 1 cut(s) | 489 |
| GsuI | CTGGAG | 1 cut(s) | 768 |
| HaeII | RGCGCY | 1 cut(s) | 1195 |
| HaeIII | GGCC | 3 cut(s) | 61, 1042, 1289 |
| HapII | CCGG | 3 cut(s) | 123, 473, 1043 |
| HgaI | GACGC | 1 cut(s) | 911 |
| HhaI | GCGC | 1 cut(s) | 1194 |
| Hin1II | CATG | 7 cut(s) | 161, 349, 363, 390, 644, 1342, 1370 |
| Hin6I | GCGC | 1 cut(s) | 1192 |
| HinP1I | GCGC | 1 cut(s) | 1192 |
| HincII | GTYRAC | 2 cut(s) | 420, 565 |
| HindII | GTYRAC | 2 cut(s) | 420, 565 |
| HindIII | AAGCTT | 4 cut(s) | 132, 836, 908, 1211 |
| HinfI | GANTC | 7 cut(s) | 592, 637, 695, 752, 860, 1163, 1447 |
| HpaII | CCGG | 3 cut(s) | 123, 473, 1043 |
| HphI | GGTGA | 2 cut(s) | 204, 1210 |
| Hpy166II | GTNNAC | 5 cut(s) | 152, 212, 420, 565, 725 |
| Hpy188I | TCNGA | 7 cut(s) | 301, 325, 694, 948, 1034, 1396, 1452 |
| Hpy188III | TCNNGA | 6 cut(s) | 158, 168, 473, 969, 1367, 1481 |
| Hpy8I | GTNNAC | 5 cut(s) | 152, 212, 420, 565, 725 |
| HpyAV | CCTTC | 5 cut(s) | 393, 675, 1079, 1274, 1468 |
| HpyCH4III | ACNGT | 4 cut(s) | 66, 458, 513, 1352 |
| HpyCH4IV | ACGT | 1 cut(s) | 714 |
| HpyCH4V | TGCA | 8 cut(s) | 7, 82, 390, 796, 957, 1027, 1139, 1205 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 140, 963, 1189 |
| HpyF3I | CTNAG | 3 cut(s) | 324, 691, 702 |
| HpySE526I | ACGT | 1 cut(s) | 714 |
| Hsp92II | CATG | 7 cut(s) | 161, 349, 363, 390, 644, 1342, 1370 |
| HspAI | GCGC | 1 cut(s) | 1192 |
| Kpn2I | TCCGGA | 1 cut(s) | 472 |
| Kzo9I | GATC | 2 cut(s) | 583, 1403 |
| LmnI | GCTCC | 4 cut(s) | 787, 886, 949, 1009 |
| Lsp1109I | GCAGC | 1 cut(s) | 564 |
| LweI | GCATC | 4 cut(s) | 611, 769, 944, 1483 |
| MaeI | CTAG | 3 cut(s) | 633, 1298, 1481 |
| MaeII | ACGT | 1 cut(s) | 714 |
| MaeIII | GTNAC | 1 cut(s) | 1198 |
| MalI | GATC | 2 cut(s) | 585, 1405 |
| MboI | GATC | 2 cut(s) | 583, 1403 |
| MboII | GAAGA | 7 cut(s) | 183, 454, 566, 788, 884, 1280, 1386 |
| MhlI | GDGCHC | 2 cut(s) | 968, 1524 |
| MlyI | GAGTC | 2 cut(s) | 646, 1441 |
| MmeI | TCCRAC | 2 cut(s) | 750, 1243 |
| MnlI | CCTC | 8 cut(s) | 40, 225, 345, 553, 700, 766, 1237, 1279 |
| MroI | TCCGGA | 1 cut(s) | 472 |
| MroXI | GAANNNNTTC | 3 cut(s) | 20, 178, 295 |
| MseI | TTAA | 8 cut(s) | 264, 353, 429, 549, 654, 825, 834, 936 |
| MspA1I | CMGCKG | 1 cut(s) | 1221 |
| MspI | CCGG | 3 cut(s) | 123, 473, 1043 |
| MspR9I | CCNGG | 4 cut(s) | 57, 786, 1196, 1292 |
| Mva1269I | GAATGC | 1 cut(s) | 336 |
| MvaI | CCWGG | 4 cut(s) | 57, 786, 1196, 1292 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 140, 963, 1189 |
| NcoI | CCATGG | 1 cut(s) | 345 |
| NdeI | CATATG | 1 cut(s) | 570 |
| NdeII | GATC | 2 cut(s) | 583, 1403 |
| NlaIII | CATG | 7 cut(s) | 161, 349, 363, 390, 644, 1342, 1370 |
| NlaIV | GGNNCC | 3 cut(s) | 1061, 1317, 1336 |
| NmeAIII | GCCGAG | 1 cut(s) | 1088 |
| NmuCI | GTSAC | 1 cut(s) | 1198 |
| NspI | RCATGY | 1 cut(s) | 390 |
| PagI | TCATGA | 2 cut(s) | 157, 1366 |
| PctI | GAATGC | 1 cut(s) | 336 |
| PdmI | GAANNNNTTC | 3 cut(s) | 20, 178, 295 |
| PfeI | GAWTC | 5 cut(s) | 592, 695, 752, 860, 1163 |
| PflFI | GACNNNGTC | 1 cut(s) | 458 |
| PfoI | TCCNGGA | 1 cut(s) | 784 |
| PkrI | GCNGC | 3 cut(s) | 6, 576, 579 |
| PleI | GAGTC | 2 cut(s) | 645, 1441 |
| PpsI | GAGTC | 2 cut(s) | 645, 1441 |
| PshBI | ATTAAT | 1 cut(s) | 549 |
| Psp124BI | GAGCTC | 1 cut(s) | 1524 |
| Psp6I | CCWGG | 4 cut(s) | 55, 784, 1194, 1290 |
| PspFI | CCCAGC | 1 cut(s) | 485 |
| PspGI | CCWGG | 4 cut(s) | 55, 784, 1194, 1290 |
| PspN4I | GGNNCC | 3 cut(s) | 1061, 1317, 1336 |
| PspPI | GGNCC | 3 cut(s) | 59, 1288, 1502 |
| PstI | CTGCAG | 2 cut(s) | 798, 1029 |
| PstNI | CAGNNNCTG | 1 cut(s) | 698 |
| PsyI | GACNNNGTC | 1 cut(s) | 458 |
| PvuII | CAGCTG | 1 cut(s) | 1221 |
| RsaI | GTAC | 1 cut(s) | 1349 |
| RsaNI | GTAC | 1 cut(s) | 1348 |
| SacI | GAGCTC | 1 cut(s) | 1524 |
| SaqAI | TTAA | 8 cut(s) | 264, 353, 429, 549, 654, 825, 834, 936 |
| SatI | GCNGC | 3 cut(s) | 5, 575, 578 |
| Sau3AI | GATC | 2 cut(s) | 583, 1403 |
| Sau96I | GGNCC | 3 cut(s) | 59, 1288, 1502 |
| SchI | GAGTC | 2 cut(s) | 646, 1441 |
| ScrFI | CCNGG | 4 cut(s) | 57, 786, 1196, 1292 |
| SduI | GDGCHC | 2 cut(s) | 968, 1524 |
| SfaNI | GCATC | 4 cut(s) | 611, 769, 944, 1483 |
| SfcI | CTRYAG | 4 cut(s) | 243, 794, 1025, 1222 |
| SinI | GGWCC | 1 cut(s) | 1502 |
| SmlI | CTYRAG | 3 cut(s) | 967, 1343, 1497 |
| SmoI | CTYRAG | 3 cut(s) | 967, 1343, 1497 |
| SsiI | CCGC | 3 cut(s) | 574, 669, 884 |
| SspI | AATATT | 1 cut(s) | 257 |
| SspMI | CTAG | 3 cut(s) | 633, 1298, 1481 |
| SstI | GAGCTC | 1 cut(s) | 1524 |
| StyD4I | CCNGG | 4 cut(s) | 55, 784, 1194, 1290 |
| StyI | CCWWGG | 3 cut(s) | 345, 446, 960 |
| TaaI | ACNGT | 4 cut(s) | 66, 458, 513, 1352 |
| TaiI | ACGT | 1 cut(s) | 717 |
| TaqI | TCGA | 1 cut(s) | 1428 |
| TaqII | GACCGA | 1 cut(s) | 1292 |
| TauI | GCSGC | 1 cut(s) | 577 |
| TfiI | GAWTC | 5 cut(s) | 592, 695, 752, 860, 1163 |
| Tru1I | TTAA | 8 cut(s) | 264, 353, 429, 549, 654, 825, 834, 936 |
| Tru9I | TTAA | 8 cut(s) | 264, 353, 429, 549, 654, 825, 834, 936 |
| TscAI | CASTG | 1 cut(s) | 69 |
| TseFI | GTSAC | 1 cut(s) | 1198 |
| TseI | GCWGC | 2 cut(s) | 4, 577 |
| Tsp45I | GTSAC | 1 cut(s) | 1198 |
| TspGWI | ACGGA | 2 cut(s) | 745, 764 |
| TspRI | CASTG | 1 cut(s) | 69 |
| Tth111I | GACNNNGTC | 1 cut(s) | 458 |
| VpaK11BI | GGWCC | 1 cut(s) | 1502 |
| VspI | ATTAAT | 1 cut(s) | 549 |
| XbaI | TCTAGA | 1 cut(s) | 1480 |
| XceI | RCATGY | 1 cut(s) | 390 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1327 |
| XmnI | GAANNNNTTC | 3 cut(s) | 20, 178, 295 |
| XspI | CTAG | 3 cut(s) | 633, 1298, 1481 |