Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006596

Physical Location & Seq

Genomic Coordinates Reverse (-)

35351472 .. 35356496

Gene Structure 5025 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018755

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGAAGACGACATCCCCAAATTGGCTGCTGATTCCGATGAGCTTGACCATGTTCCGTTGATACGACGCCGTAACCTGTTACTGGCTACCAAGCAAAAACCGACGTCTCTCATTGATATTGCTGTTAAACAAGAAGACGCAGTCTCCGAGTCTCGACGTTTGCAGGATGTGTTTTCTTTTCCTTGTGCTGCTAGAGAAGTGGGAGTTCAATTATTGGAACAAGAAGAACACCGGGATTTTGCAACTCCCAGAGGAGCTACACCTGAACTTCCGTGCAGTAAATCTGAAGTAGATTCTTCAGTCGATCAATGTTTGCATAATGACGCTTTCAGCCGATATGTGGAAATGACTGCTATCTGCGACTCCAATGGGACAAAGTTGAAGACTTTTGCTTCTTCTGATCAGATTGATTGTACTAAACGTAGCATTGGTGTTGCTCAACTAGAGAGAATTGGTGTTGATAGTTGTACTAAACGTAGCATTGGTGTTGCTCAACTAGAGAGAATTGGTGTTGATAGTTGCGCTCTACCTGAAAATCCTACATTATCAGAAGCTTCTGCTGAAGTTAAGGTTGCTTACCCTGACAACTTGTCAAGCTCATTTGGAGATGGAATGAATGGCTTTGCTGGTTCTCGTGTGCAGACGGTTATGGTGAAAAATGAGATCTCCATGCACTCTACTTATGATCATCTGGACCACATTGCCTTGAAAGACCGGCAAAGGATGCTACTATCAAGGAAACTCTTCAGGTTGGAAAATTCAGTTTCGGAGGATATCCCTGAGGCATTCTCTGAAGATGTTTTGCAACAACTTGCCAGTCAAGAAAAGGGAGGTACTAGTATTGTTGGTGAAGAAGCTGTAATGGCTACCTTTCAGCCTTATGACAATCCTGGAACAAATGCTTCAGTTCTTTGTAGATCTATGATCAGTCCACCACAACAGAATGTTGCTTTCTCATCATTTTCTAGTACTACTAGTCAATGTTCATTTGATTTAGCTAACTCTAAATCAAACGATTATAGAAAAAGTTCTGAAAGTGACAAGATATGCTCATCTGAGAGAATTTCCCCTACTGCCATGAATTTAAGTCCATATGGGGGACAAGATGATGGGCCTACAAGCACAAGTAGAGTGCATTCCTCAGTCAAAATAAAGGATGAACCTTTGGACAACAGTGACTTCCTGAGTCTGGGCAGATGTGTTAGGGGTGACTTCTCTCTTAACATACTTCCTGTAAAGCAAGAACTTAGAGCTCCCAACAAAATTAGTGACGATGAGATAGACAATATGCTGCTGCGAGATCGGATGAATCTATTGGTGTCTCAGGACAACTCTGAAGTGAGTATGTCTAAGAACTATGGATGCTTGGTTAAAATTGTGCCTTCTGCCGTTAGCTGTGGCCCTATTTCCATGGAATCTGCTAAGCCTATAAGCATTAGTCGTCCAAGGAAAAGGAAAAAGACTGCCACGGATTCTATTAAAACAGCTTTGGAGGAGGATGCTCCAGGACTCTTGCAGGTATTAATTGACAAGGGGGTATTGGTTGATGAAATCAAGCTTTATGGTGAGATGGAGAGTGATGAAGCTTTAGATGAGTCTTTTTGTGAAGATAGCTTTGCACAGCTTGAAGCTGTGATGTCAAAGCTTTTCTTGCAGCGCCAGTCGTTTTTTAAGTTTGCTCCAATACGATGCACCAAGGAGTCGAGGGCTAGTTATTGCTTAGCTTGTCTAATTTCACTTGTAGAGCAGGCCCGATATTTGCAGTTTAGAAACTGGCCTGTTGAATGGGGTTGGTGCCGAGACCTTCAATCGTTTATATTTGTCTTTGCGAGACATAATAGAATTGTGCTTGAACGACCGGAATATGGCTATGCAACATACTTCTTTGAGCTAGTAGATTCACTACCAATTGAATGGCAGATCAAGCGCCTGGTGACTGCAATGAAGCTTACCAGCTGTAGCAGGCTTTCCCTACTTGAGAATAAAGCACTAACGGTTGGAGAAGACTTGAGTGAAGGCGAGGCCCAGGTTCTATTGGAATATGGTTGGGAACCCAATACTGGTCTGGGAACCATGCTAAAGTACTGTGAGAGAGTTGTGCATGACAGGAAGAGTGAAAGTGATAGCTCAGAGTGGAGATCAAAAATAGGGAAGATGCTAATGGACGGTTATAATGGTGGAACTCTGGTTACAACTAACATCCCAAAGAAGGTTATAGAGTGCAGAGAAGTTCAATGCCCAGAAATCAAGTTGGAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

754

Amino Acids

84.03

Weight (kDa)

5.08

Isoelectric Point (pI)

52.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16610 AT5G16610 AT5G16610
fragaria_vesca	FvH4_1g25400
malus_domestica	MD15G1138100.v1.1
prunus_persica	Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1
pyrus_communis	pycom15g12440
rosa_chinensis	RchiOBHm_Chr2g0123431
rosa_laevigata	RLG00000018748 RLG00000018755
rosa_multiflora	Rmu_sc0005876.1_g000009
rosa_roxburghii	Rroxscaffold_2G00120670
rosa_rugosa	Rorug02G0245500 Rorug02G0245600 Rorug02G0245700 Rorug02G0245800
rosa_samantha	Rh2AG304400 Rh2BG312400 Rh2CG290900 Rh2DG328400
rosa_wichuraiana	Rw2G024370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2172
AatII	GACGTC	1 cut(s)	107
Acc36I	ACCTGC	1 cut(s)	1507
AccB1I	GGYRCC	1 cut(s)	1794
AcsI	RAATTY	3 cut(s)	757, 1062, 1081
AcuI	CTGAAG	7 cut(s)	282, 306, 582, 730, 813, 888, 1356
AcyI	GRCGYC	2 cut(s)	67, 104
AfaI	GTAC	5 cut(s)	415, 469, 835, 970, 2084
AfiI	CCNNNNNNNGG	8 cut(s)	22, 82, 340, 1097, 1189, 1865, 2060, 2209
AgsI	TTSAA	9 cut(s)	209, 382, 709, 1628, 1784, 1808, 1853, 1913, 2234
AhdI	GACNNNNNGTC	1 cut(s)	589
AhlI	ACTAGT	2 cut(s)	836, 974
AjnI	CCWGG	4 cut(s)	889, 1504, 1929, 2025
Alw21I	GWGCWC	1 cut(s)	1255
Alw26I	GTCTC	6 cut(s)	111, 148, 156, 1326, 1794, 1825
AoxI	GGCC	5 cut(s)	1112, 1399, 1749, 1775, 2022
ApeKI	GCWGC	5 cut(s)	26, 188, 1291, 1294, 1654
ApoI	RAATTY	3 cut(s)	757, 1062, 1081
AseI	ATTAAT	1 cut(s)	1523
Asp700I	GAANNNNTTC	2 cut(s)	743, 1027
AspLEI	GCGC	3 cut(s)	524, 1659, 1929
AspS9I	GGNCC	5 cut(s)	694, 1112, 1400, 1750, 2023
AsuC2I	CCSGG	1 cut(s)	233
AsuHPI	GGTGA	5 cut(s)	664, 860, 1220, 1577, 1945
AvaII	GGWCC	1 cut(s)	694
AxyI	CCTNAGG	1 cut(s)	780
BanI	GGYRCC	1 cut(s)	1794
BanII	GRGCYC	1 cut(s)	1255
BauI	CACGAG	1 cut(s)	633
BbsI	GAAGAC	4 cut(s)	12, 141, 389, 2010
Bbv12I	GWGCWC	1 cut(s)	1255
BbvI	GCAGC	5 cut(s)	13, 175, 1278, 1281, 1666
BccI	CCATC	3 cut(s)	602, 1103, 1564
BceAI	ACGGC	2 cut(s)	54, 1373
BciT130I	CCWGG	4 cut(s)	891, 1506, 1931, 2027
BclI	TGATCA	3 cut(s)	400, 685, 924
BcnI	CCSGG	1 cut(s)	233
BcoDI	GTCTC	6 cut(s)	111, 148, 156, 1326, 1794, 1825
BcuI	ACTAGT	2 cut(s)	836, 974
BfaI	CTAG	8 cut(s)	192, 443, 497, 837, 966, 975, 1710, 1892
BfmI	CTRYAG	1 cut(s)	1957
BfoI	RGCGCY	2 cut(s)	1660, 1930
BfuAI	ACCTGC	1 cut(s)	1507
BglII	AGATCT	2 cut(s)	663, 917
BisI	GCNGC	5 cut(s)	27, 189, 1292, 1295, 1655
BlpI	GCTNAGC	2 cut(s)	1422, 1720
BlsI	GCNGC	5 cut(s)	28, 190, 1293, 1296, 1656
BmcAI	AGTACT	2 cut(s)	970, 2084
Bme1390I	CCNGG	5 cut(s)	233, 891, 1506, 1931, 2027
Bme18I	GGWCC	1 cut(s)	694
BmeRI	GACNNNNNGTC	1 cut(s)	589
BmgT120I	GGNCC	5 cut(s)	694, 1112, 1400, 1750, 2023
BmiI	GGNNCC	3 cut(s)	1796, 2052, 2071
BmrFI	CCNGG	5 cut(s)	233, 891, 1506, 1931, 2027
BmsI	GCATC	5 cut(s)	714, 1352, 1489, 1679, 2145
BpiI	GAAGAC	4 cut(s)	12, 141, 389, 2010
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
BpmI	CTGGAG	1 cut(s)	1488
Bpu1102I	GCTNAGC	2 cut(s)	1422, 1720
BpuEI	CTTGAG	2 cut(s)	1997, 2029
BpuMI	CCSGG	1 cut(s)	233
BsaHI	GRCGYC	2 cut(s)	67, 104
BsaI	GGTCTC	1 cut(s)	1794
BsaJI	CCNNGG	5 cut(s)	1410, 1445, 1467, 1695, 2025
BsaWI	WCCGGW	1 cut(s)	1858
BsaXI	ACNNNNNCTCC	2 cut(s)	128, 158
Bsc4I	CCNNNNNNNGG	8 cut(s)	22, 82, 340, 1097, 1189, 1865, 2060, 2209
Bse118I	RCCGGY	1 cut(s)	714
Bse1I	ACTGG	5 cut(s)	87, 816, 1660, 1778, 2065
Bse21I	CCTNAGG	1 cut(s)	780
Bse3DI	GCAATG	2 cut(s)	699, 1947
BseBI	CCWGG	4 cut(s)	891, 1506, 1931, 2027
BseDI	CCNNGG	5 cut(s)	1410, 1445, 1467, 1695, 2025
BseGI	GGATG	8 cut(s)	12, 172, 729, 1162, 1311, 1367, 1504, 2199
BseLI	CCNNNNNNNGG	8 cut(s)	22, 82, 340, 1097, 1189, 1865, 2060, 2209
BseMI	GCAATG	2 cut(s)	699, 1947
BseMII	CTCAG	6 cut(s)	771, 1047, 1155, 1175, 1337, 2142
BseNI	ACTGG	5 cut(s)	87, 816, 1660, 1778, 2065
BseRI	GAGGAG	2 cut(s)	267, 1508
BseXI	GCAGC	5 cut(s)	13, 175, 1278, 1281, 1666
BsgI	GTGCAG	3 cut(s)	295, 659, 2242
Bsh1285I	CGRYCG	1 cut(s)	1859
BshFI	GGCC	5 cut(s)	1114, 1401, 1751, 1777, 2024
BshNI	GGYRCC	1 cut(s)	1794
BsiEI	CGRYCG	1 cut(s)	1859
BsiHKAI	GWGCWC	1 cut(s)	1255
BsiSI	CCGG	3 cut(s)	232, 715, 1859
BslFI	GGGAC	2 cut(s)	385, 1113
BslI	CCNNNNNNNGG	8 cut(s)	22, 82, 340, 1097, 1189, 1865, 2060, 2209
BsmAI	GTCTC	6 cut(s)	111, 148, 156, 1326, 1794, 1825
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	2 cut(s)	385, 1113
BsmI	GAATGC	2 cut(s)	785, 1135
BsnI	GGCC	5 cut(s)	1114, 1401, 1751, 1777, 2024
Bso31I	GGTCTC	1 cut(s)	1794
Bsp1286I	GDGCHC	1 cut(s)	1255
Bsp143I	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
Bsp1720I	GCTNAGC	2 cut(s)	1422, 1720
Bsp19I	CCATGG	1 cut(s)	1410
BspANI	GGCC	5 cut(s)	1114, 1401, 1751, 1777, 2024
BspCNI	CTCAG	6 cut(s)	772, 1048, 1154, 1176, 1336, 2141
BspLI	GGNNCC	3 cut(s)	1796, 2052, 2071
BspMI	ACCTGC	1 cut(s)	1507
BspT107I	GGYRCC	1 cut(s)	1794
BspTNI	GGTCTC	1 cut(s)	1794
BsrDI	GCAATG	2 cut(s)	699, 1947
BsrFI	RCCGGY	1 cut(s)	714
BsrI	ACTGG	5 cut(s)	87, 816, 1660, 1778, 2065
BssAI	RCCGGY	1 cut(s)	714
BssECI	CCNNGG	5 cut(s)	1410, 1445, 1467, 1695, 2025
BssMI	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
BssNI	GRCGYC	2 cut(s)	67, 104
BssSI	CACGAG	1 cut(s)	633
BssT1I	CCWWGG	3 cut(s)	1410, 1445, 1695
Bst2BI	CACGAG	1 cut(s)	633
Bst2UI	CCWGG	4 cut(s)	891, 1506, 1931, 2027
Bst4CI	ACNGT	5 cut(s)	646, 1175, 1996, 2087, 2168
Bst6I	CTCTTC	2 cut(s)	749, 2105
BstACI	GRCGYC	2 cut(s)	67, 104
BstAPI	GCANNNNNTGC	1 cut(s)	724
BstC8I	GCNNGC	2 cut(s)	1749, 1964
BstDSI	CCRYGG	2 cut(s)	1410, 1467
BstF5I	GGATG	8 cut(s)	12, 172, 729, 1162, 1311, 1367, 1504, 2199
BstH2I	RGCGCY	2 cut(s)	1660, 1930
BstHHI	GCGC	3 cut(s)	524, 1659, 1929
BstKTI	GATC	9 cut(s)	307, 403, 666, 688, 920, 927, 1303, 1923, 2141
BstMAI	GTCTC	6 cut(s)	111, 148, 156, 1326, 1794, 1825
BstMBI	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
BstMCI	CGRYCG	1 cut(s)	1859
BstMWI	GCNNNNNNNGC	4 cut(s)	724, 863, 1651, 1924
BstNI	CCWGG	4 cut(s)	891, 1506, 1931, 2027
BstSCI	CCNGG	5 cut(s)	231, 889, 1504, 1929, 2025
BstSFI	CTRYAG	1 cut(s)	1957
BstV1I	GCAGC	5 cut(s)	13, 175, 1278, 1281, 1666
BstV2I	GAAGAC	4 cut(s)	12, 141, 389, 2010
BstX2I	RGATCY	2 cut(s)	663, 917
BstXI	CCANNNNNNTGG	1 cut(s)	1914
BstYI	RGATCY	2 cut(s)	663, 917
Bsu36I	CCTNAGG	1 cut(s)	780
BsuRI	GGCC	5 cut(s)	1114, 1401, 1751, 1777, 2024
BtgI	CCRYGG	2 cut(s)	1410, 1467
BtsCI	GGATG	8 cut(s)	12, 172, 729, 1162, 1311, 1367, 1504, 2199
BtsIMutI	CAGTG	1 cut(s)	1180
BveI	ACCTGC	1 cut(s)	1507
Cac8I	GCNNGC	2 cut(s)	1749, 1964
CfoI	GCGC	3 cut(s)	524, 1659, 1929
Cfr10I	RCCGGY	1 cut(s)	714
Cfr13I	GGNCC	5 cut(s)	694, 1112, 1400, 1750, 2023
CseI	GACGC	3 cut(s)	75, 146, 332
Csp6I	GTAC	5 cut(s)	414, 468, 834, 969, 2083
CviAII	CATG	6 cut(s)	50, 670, 1078, 1411, 2074, 2102
CviQI	GTAC	5 cut(s)	414, 468, 834, 969, 2083
DpnI	GATC	9 cut(s)	306, 402, 665, 687, 919, 926, 1302, 1922, 2140
DpnII	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
DriI	GACNNNNNGTC	1 cut(s)	589
Eam1104I	CTCTTC	2 cut(s)	749, 2105
Eam1105I	GACNNNNNGTC	1 cut(s)	589
EarI	CTCTTC	2 cut(s)	749, 2105
Ecl136II	GAGCTC	1 cut(s)	1253
Eco130I	CCWWGG	3 cut(s)	1410, 1445, 1695
Eco24I	GRGCYC	1 cut(s)	1255
Eco31I	GGTCTC	1 cut(s)	1794
Eco32I	GATATC	1 cut(s)	775
Eco47I	GGWCC	1 cut(s)	694
Eco53kI	GAGCTC	1 cut(s)	1253
Eco57I	CTGAAG	7 cut(s)	282, 306, 582, 730, 813, 888, 1356
Eco81I	CCTNAGG	1 cut(s)	780
EcoICRI	GAGCTC	1 cut(s)	1253
EcoRII	CCWGG	4 cut(s)	889, 1504, 1929, 2025
EcoRV	GATATC	1 cut(s)	775
EcoT14I	CCWWGG	3 cut(s)	1410, 1445, 1695
EcoT38I	GRGCYC	1 cut(s)	1255
ErhI	CCWWGG	3 cut(s)	1410, 1445, 1695
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	6 cut(s)	53, 673, 1081, 1414, 2077, 2105
FalI	AAGNNNNNCTT	2 cut(s)	1634, 1666
FaqI	GGGAC	2 cut(s)	385, 1113
FatI	CATG	6 cut(s)	49, 669, 1077, 1410, 2073, 2101
FauNDI	CATATG	1 cut(s)	1093
FbaI	TGATCA	3 cut(s)	400, 685, 924
Fnu4HI	GCNGC	5 cut(s)	27, 189, 1292, 1295, 1655
FokI	GGATG	7 cut(s)	179, 736, 1169, 1318, 1374, 1511, 2186
FriOI	GRGCYC	1 cut(s)	1255
Fsp4HI	GCNGC	5 cut(s)	27, 189, 1292, 1295, 1655
FspBI	CTAG	8 cut(s)	192, 443, 497, 837, 966, 975, 1710, 1892
GlaI	GCGC	3 cut(s)	523, 1658, 1928
GluI	GCNGC	5 cut(s)	27, 189, 1292, 1295, 1655
GsuI	CTGGAG	1 cut(s)	1488
HaeII	RGCGCY	2 cut(s)	1660, 1930
HaeIII	GGCC	5 cut(s)	1114, 1401, 1751, 1777, 2024
HapII	CCGG	3 cut(s)	232, 715, 1859
HgaI	GACGC	3 cut(s)	75, 146, 332
HhaI	GCGC	3 cut(s)	524, 1659, 1929
Hin1I	GRCGYC	2 cut(s)	67, 104
Hin1II	CATG	6 cut(s)	53, 673, 1081, 1414, 2077, 2105
Hin6I	GCGC	3 cut(s)	522, 1657, 1927
HinP1I	GCGC	3 cut(s)	522, 1657, 1927
HindIII	AAGCTT	5 cut(s)	552, 1556, 1584, 1643, 1946
HpaII	CCGG	3 cut(s)	232, 715, 1859
HphI	GGTGA	5 cut(s)	664, 860, 1220, 1577, 1945
Hpy166II	GTNNAC	1 cut(s)	932
Hpy188III	TCNNGA	5 cut(s)	153, 692, 821, 1183, 1325
Hpy8I	GTNNAC	1 cut(s)	932
Hpy99I	CGWCG	3 cut(s)	69, 106, 159
HpyAV	CCTTC	4 cut(s)	1392, 1814, 2009, 2203
HpyCH4III	ACNGT	5 cut(s)	646, 1175, 1996, 2087, 2168
HpyCH4IV	ACGT	4 cut(s)	104, 157, 421, 475
HpyF10VI	GCNNNNNNNGC	4 cut(s)	724, 863, 1651, 1924
HpySE526I	ACGT	4 cut(s)	104, 157, 421, 475
Hsp92I	GRCGYC	2 cut(s)	67, 104
Hsp92II	CATG	6 cut(s)	53, 673, 1081, 1414, 2077, 2105
HspAI	GCGC	3 cut(s)	522, 1657, 1927
Ksp22I	TGATCA	3 cut(s)	400, 685, 924
Kzo9I	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
LmnI	GCTCC	4 cut(s)	254, 1258, 1507, 1684
Lsp1109I	GCAGC	5 cut(s)	13, 175, 1278, 1281, 1666
LweI	GCATC	5 cut(s)	714, 1352, 1489, 1679, 2145
MaeI	CTAG	8 cut(s)	192, 443, 497, 837, 966, 975, 1710, 1892
MaeII	ACGT	4 cut(s)	104, 157, 421, 475
MaeIII	GTNAC	8 cut(s)	71, 78, 1037, 1175, 1208, 1268, 1933, 2188
MalI	GATC	9 cut(s)	306, 402, 665, 687, 919, 926, 1302, 1922, 2140
MboI	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
MfeI	CAATTG	1 cut(s)	1908
MflI	RGATCY	2 cut(s)	663, 917
MhlI	GDGCHC	1 cut(s)	1255
MlyI	GAGTC	6 cut(s)	158, 356, 1195, 1503, 1604, 1709
MmeI	TCCRAC	3 cut(s)	732, 1978, 2232
MnlI	CCTC	9 cut(s)	245, 763, 775, 824, 1150, 1486, 1489, 1698, 2014
MroXI	GAANNNNTTC	2 cut(s)	743, 1027
MseI	TTAA	8 cut(s)	126, 567, 1085, 1221, 1371, 1479, 1523, 1671
MspA1I	CMGCKG	1 cut(s)	1956
MspI	CCGG	3 cut(s)	232, 715, 1859
MspR9I	CCNGG	5 cut(s)	233, 891, 1506, 1931, 2027
MunI	CAATTG	1 cut(s)	1908
Mva1269I	GAATGC	2 cut(s)	785, 1135
MvaI	CCWGG	4 cut(s)	891, 1506, 1931, 2027
MwoI	GCNNNNNNNGC	4 cut(s)	724, 863, 1651, 1924
NciI	CCSGG	1 cut(s)	233
NcoI	CCATGG	1 cut(s)	1410
NdeI	CATATG	1 cut(s)	1093
NdeII	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
NlaIII	CATG	6 cut(s)	53, 673, 1081, 1414, 2077, 2105
NlaIV	GGNNCC	3 cut(s)	1796, 2052, 2071
NmeAIII	GCCGAG	1 cut(s)	1823
NmuCI	GTSAC	5 cut(s)	1037, 1175, 1208, 1268, 1933
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	2 cut(s)	785, 1135
PdmI	GAANNNNTTC	2 cut(s)	743, 1027
PfeI	GAWTC	6 cut(s)	32, 293, 1309, 1415, 1472, 1898
PflFI	GACNNNGTC	1 cut(s)	140
PfoI	TCCNGGA	2 cut(s)	889, 1504
PkrI	GCNGC	5 cut(s)	28, 190, 1293, 1296, 1656
PleI	GAGTC	6 cut(s)	157, 356, 1194, 1503, 1603, 1708
PpsI	GAGTC	6 cut(s)	157, 356, 1194, 1503, 1603, 1708
PshBI	ATTAAT	1 cut(s)	1523
PsiI	TTATAA	1 cut(s)	2172
Psp124BI	GAGCTC	1 cut(s)	1255
Psp6I	CCWGG	4 cut(s)	889, 1504, 1929, 2025
PspGI	CCWGG	4 cut(s)	889, 1504, 1929, 2025
PspN4I	GGNNCC	3 cut(s)	1796, 2052, 2071
PspPI	GGNCC	5 cut(s)	694, 1112, 1400, 1750, 2023
PsrI	GAACNNNNNNTAC	2 cut(s)	2173, 2205
PsuI	RGATCY	2 cut(s)	663, 917
PsyI	GACNNNGTC	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	1956
RsaI	GTAC	5 cut(s)	415, 469, 835, 970, 2084
RsaNI	GTAC	5 cut(s)	414, 468, 834, 969, 2083
SacI	GAGCTC	1 cut(s)	1255
SaqAI	TTAA	8 cut(s)	126, 567, 1085, 1221, 1371, 1479, 1523, 1671
SatI	GCNGC	5 cut(s)	27, 189, 1292, 1295, 1655
Sau3AI	GATC	9 cut(s)	304, 400, 663, 685, 917, 924, 1300, 1920, 2138
Sau96I	GGNCC	5 cut(s)	694, 1112, 1400, 1750, 2023
ScaI	AGTACT	2 cut(s)	970, 2084
SchI	GAGTC	6 cut(s)	158, 356, 1195, 1503, 1604, 1709
ScrFI	CCNGG	5 cut(s)	233, 891, 1506, 1931, 2027
SduI	GDGCHC	1 cut(s)	1255
SfaNI	GCATC	5 cut(s)	714, 1352, 1489, 1679, 2145
SfcI	CTRYAG	1 cut(s)	1957
SinI	GGWCC	1 cut(s)	694
SmlI	CTYRAG	2 cut(s)	1976, 2008
SmoI	CTYRAG	2 cut(s)	1976, 2008
SpeI	ACTAGT	2 cut(s)	836, 974
SspMI	CTAG	8 cut(s)	192, 443, 497, 837, 966, 975, 1710, 1892
SstI	GAGCTC	1 cut(s)	1255
StyD4I	CCNGG	5 cut(s)	231, 889, 1504, 1929, 2025
StyI	CCWWGG	3 cut(s)	1410, 1445, 1695
TaaI	ACNGT	5 cut(s)	646, 1175, 1996, 2087, 2168
TaiI	ACGT	4 cut(s)	107, 160, 424, 478
TaqI	TCGA	3 cut(s)	154, 303, 1703
TatI	WGTACW	4 cut(s)	413, 467, 968, 2082
TfiI	GAWTC	6 cut(s)	32, 293, 1309, 1415, 1472, 1898
Tru1I	TTAA	8 cut(s)	126, 567, 1085, 1221, 1371, 1479, 1523, 1671
Tru9I	TTAA	8 cut(s)	126, 567, 1085, 1221, 1371, 1479, 1523, 1671
TscAI	CASTG	1 cut(s)	1180
TseFI	GTSAC	5 cut(s)	1037, 1175, 1208, 1268, 1933
TseI	GCWGC	5 cut(s)	26, 188, 1291, 1294, 1654
Tsp45I	GTSAC	5 cut(s)	1037, 1175, 1208, 1268, 1933
TspDTI	ATGAA	8 cut(s)	629, 975, 1094, 1173, 1322, 1563, 1596, 1958
TspGWI	ACGGA	3 cut(s)	45, 261, 1484
TspRI	CASTG	1 cut(s)	1180
Tth111I	GACNNNGTC	1 cut(s)	140
VpaK11BI	GGWCC	1 cut(s)	694
VspI	ATTAAT	1 cut(s)	1523
XapI	RAATTY	3 cut(s)	757, 1062, 1081
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2062
XmnI	GAANNNNTTC	2 cut(s)	743, 1027
XspI	CTAG	8 cut(s)	192, 443, 497, 837, 966, 975, 1710, 1892
ZraI	GACGTC	1 cut(s)	105
ZrmI	AGTACT	2 cut(s)	970, 2084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.