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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16610 AT5G16610 AT5G16610 |
| fragaria_vesca | FvH4_1g25400 |
| malus_domestica | MD15G1138100.v1.1 |
| prunus_persica | Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 |
| pyrus_communis | pycom15g12440 |
| rosa_chinensis | RchiOBHm_Chr2g0123431 |
| rosa_laevigata | RLG00000018748 RLG00000018755 |
| rosa_multiflora | Rmu_sc0005876.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00120670 |
| rosa_rugosa | Rorug02G0245500 Rorug02G0245600 Rorug02G0245700 Rorug02G0245800 |
| rosa_samantha | Rh2AG304400 Rh2BG312400 Rh2CG290900 Rh2DG328400 |
| rosa_wichuraiana | Rw2G024370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2130 |
| Acc36I | ACCTGC | 1 cut(s) | 1465 |
| AccB1I | GGYRCC | 1 cut(s) | 1752 |
| AciI | CCGC | 1 cut(s) | 2136 |
| AclWI | GGATC | 1 cut(s) | 253 |
| AcsI | RAATTY | 3 cut(s) | 694, 1023, 1042 |
| AcuI | CTGAAG | 6 cut(s) | 273, 297, 667, 698, 849, 1317 |
| AcyI | GRCGYC | 2 cut(s) | 67, 104 |
| AfaI | GTAC | 4 cut(s) | 406, 796, 931, 2042 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 22, 82, 331, 419, 1058, 1150, 1823, 2018, 2167 |
| AgsI | TTSAA | 7 cut(s) | 200, 1586, 1742, 1766, 1811, 1871, 2192 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 526 |
| AhlI | ACTAGT | 3 cut(s) | 797, 926, 935 |
| AjnI | CCWGG | 4 cut(s) | 850, 1462, 1887, 1983 |
| Alw26I | GTCTC | 4 cut(s) | 111, 148, 156, 1783 |
| AlwI | GGATC | 1 cut(s) | 253 |
| Ama87I | CYCGRG | 1 cut(s) | 153 |
| AoxI | GGCC | 4 cut(s) | 1073, 1707, 1733, 1980 |
| ApeKI | GCWGC | 3 cut(s) | 26, 179, 1612 |
| ApoI | RAATTY | 3 cut(s) | 694, 1023, 1042 |
| AseI | ATTAAT | 1 cut(s) | 1481 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 680 |
| AspLEI | GCGC | 2 cut(s) | 1617, 1887 |
| AspS9I | GGNCC | 5 cut(s) | 631, 1073, 1708, 1759, 1981 |
| AsuC2I | CCSGG | 1 cut(s) | 1757 |
| AsuHPI | GGTGA | 8 cut(s) | 601, 821, 885, 1181, 1241, 1535, 1903, 1988 |
| AvaI | CYCGRG | 1 cut(s) | 153 |
| AvaII | GGWCC | 2 cut(s) | 631, 1759 |
| AxyI | CCTNAGG | 1 cut(s) | 741 |
| BanI | GGYRCC | 1 cut(s) | 1752 |
| BauI | CACGAG | 1 cut(s) | 570 |
| BbsI | GAAGAC | 3 cut(s) | 12, 141, 1968 |
| BbvI | GCAGC | 3 cut(s) | 13, 166, 1624 |
| BccI | CCATC | 2 cut(s) | 539, 1064 |
| BceAI | ACGGC | 1 cut(s) | 54 |
| BciT130I | CCWGG | 4 cut(s) | 852, 1464, 1889, 1985 |
| BclI | TGATCA | 1 cut(s) | 622 |
| BcnI | CCSGG | 1 cut(s) | 1757 |
| BcoDI | GTCTC | 4 cut(s) | 111, 148, 156, 1783 |
| BcuI | ACTAGT | 3 cut(s) | 797, 926, 935 |
| BfaI | CTAG | 7 cut(s) | 183, 414, 434, 798, 927, 936, 1668 |
| BfmI | CTRYAG | 3 cut(s) | 1077, 1357, 1915 |
| BfoI | RGCGCY | 2 cut(s) | 1618, 1888 |
| BfuAI | ACCTGC | 1 cut(s) | 1465 |
| BglII | AGATCT | 3 cut(s) | 600, 878, 1211 |
| BisI | GCNGC | 3 cut(s) | 27, 180, 1613 |
| BlpI | GCTNAGC | 1 cut(s) | 1380 |
| BlsI | GCNGC | 3 cut(s) | 28, 181, 1614 |
| BmcAI | AGTACT | 2 cut(s) | 931, 2042 |
| Bme1390I | CCNGG | 5 cut(s) | 852, 1464, 1757, 1889, 1985 |
| Bme18I | GGWCC | 2 cut(s) | 631, 1759 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 526 |
| BmeT110I | CYCGRG | 1 cut(s) | 153 |
| BmgT120I | GGNCC | 5 cut(s) | 631, 1073, 1708, 1759, 1981 |
| BmiI | GGNNCC | 4 cut(s) | 1754, 1760, 2010, 2029 |
| BmrFI | CCNGG | 5 cut(s) | 852, 1464, 1757, 1889, 1985 |
| BmsI | GCATC | 5 cut(s) | 651, 1313, 1447, 1637, 2103 |
| BpiI | GAAGAC | 3 cut(s) | 12, 141, 1968 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 734, 766 |
| BpmI | CTGGAG | 1 cut(s) | 1446 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1380 |
| BpuEI | CTTGAG | 2 cut(s) | 483, 1987 |
| BpuMI | CCSGG | 1 cut(s) | 1757 |
| BsaHI | GRCGYC | 2 cut(s) | 67, 104 |
| BsaJI | CCNNGG | 3 cut(s) | 1403, 1425, 1983 |
| BsaWI | WCCGGW | 1 cut(s) | 1816 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 128, 158 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 22, 82, 331, 419, 1058, 1150, 1823, 2018, 2167 |
| Bse118I | RCCGGY | 1 cut(s) | 100 |
| Bse1I | ACTGG | 4 cut(s) | 87, 1618, 1736, 2023 |
| Bse21I | CCTNAGG | 1 cut(s) | 741 |
| Bse3DI | GCAATG | 3 cut(s) | 636, 718, 1905 |
| BseBI | CCWGG | 4 cut(s) | 852, 1464, 1889, 1985 |
| BseDI | CCNNGG | 3 cut(s) | 1403, 1425, 1983 |
| BseGI | GGATG | 8 cut(s) | 12, 666, 1123, 1240, 1272, 1328, 1462, 2157 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 22, 82, 331, 419, 1058, 1150, 1823, 2018, 2167 |
| BseMI | GCAATG | 3 cut(s) | 636, 718, 1905 |
| BseMII | CTCAG | 5 cut(s) | 732, 1008, 1116, 1136, 2100 |
| BseNI | ACTGG | 4 cut(s) | 87, 1618, 1736, 2023 |
| BseRI | GAGGAG | 1 cut(s) | 1466 |
| BseXI | GCAGC | 3 cut(s) | 13, 166, 1624 |
| BsgI | GTGCAG | 3 cut(s) | 286, 596, 2200 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1817 |
| BshFI | GGCC | 4 cut(s) | 1075, 1709, 1735, 1982 |
| BshNI | GGYRCC | 1 cut(s) | 1752 |
| BsiEI | CGRYCG | 1 cut(s) | 1817 |
| BsiHKCI | CYCGRG | 1 cut(s) | 153 |
| BsiSI | CCGG | 3 cut(s) | 101, 1756, 1817 |
| BslFI | GGGAC | 3 cut(s) | 376, 1074, 1772 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 22, 82, 331, 419, 1058, 1150, 1823, 2018, 2167 |
| BsmAI | GTCTC | 4 cut(s) | 111, 148, 156, 1783 |
| BsmBI | CGTCTC | 1 cut(s) | 111 |
| BsmFI | GGGAC | 3 cut(s) | 376, 1074, 1772 |
| BsmI | GAATGC | 3 cut(s) | 746, 1096, 2198 |
| BsnI | GGCC | 4 cut(s) | 1075, 1709, 1735, 1982 |
| BsoBI | CYCGRG | 1 cut(s) | 153 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1380 |
| BspACI | CCGC | 1 cut(s) | 2136 |
| BspANI | GGCC | 4 cut(s) | 1075, 1709, 1735, 1982 |
| BspCNI | CTCAG | 5 cut(s) | 733, 1009, 1115, 1137, 2099 |
| BspLI | GGNNCC | 4 cut(s) | 1754, 1760, 2010, 2029 |
| BspMI | ACCTGC | 1 cut(s) | 1465 |
| BspPI | GGATC | 1 cut(s) | 253 |
| BspT107I | GGYRCC | 1 cut(s) | 1752 |
| BsrDI | GCAATG | 3 cut(s) | 636, 718, 1905 |
| BsrFI | RCCGGY | 1 cut(s) | 100 |
| BsrI | ACTGG | 4 cut(s) | 87, 1618, 1736, 2023 |
| BssAI | RCCGGY | 1 cut(s) | 100 |
| BssECI | CCNNGG | 3 cut(s) | 1403, 1425, 1983 |
| BssNI | GRCGYC | 2 cut(s) | 67, 104 |
| BssSI | CACGAG | 1 cut(s) | 570 |
| BssT1I | CCWWGG | 1 cut(s) | 1403 |
| Bst2BI | CACGAG | 1 cut(s) | 570 |
| Bst2UI | CCWGG | 4 cut(s) | 852, 1464, 1889, 1985 |
| Bst4CI | ACNGT | 7 cut(s) | 404, 583, 779, 1136, 1954, 2045, 2126 |
| Bst6I | CTCTTC | 1 cut(s) | 686 |
| BstACI | GRCGYC | 2 cut(s) | 67, 104 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 661 |
| BstC8I | GCNNGC | 2 cut(s) | 1707, 1922 |
| BstDEI | CTNAG | 8 cut(s) | 741, 1017, 1102, 1145, 1208, 1311, 1380, 2086 |
| BstDSI | CCRYGG | 1 cut(s) | 1425 |
| BstF5I | GGATG | 8 cut(s) | 12, 666, 1123, 1240, 1272, 1328, 1462, 2157 |
| BstH2I | RGCGCY | 2 cut(s) | 1618, 1888 |
| BstHHI | GCGC | 2 cut(s) | 1617, 1887 |
| BstMAI | GTCTC | 4 cut(s) | 111, 148, 156, 1783 |
| BstMCI | CGRYCG | 1 cut(s) | 1817 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 661, 824, 1609, 1882 |
| BstNI | CCWGG | 4 cut(s) | 852, 1464, 1889, 1985 |
| BstNSI | RCATGY | 1 cut(s) | 1252 |
| BstSCI | CCNGG | 5 cut(s) | 850, 1462, 1755, 1887, 1983 |
| BstSFI | CTRYAG | 3 cut(s) | 1077, 1357, 1915 |
| BstV1I | GCAGC | 3 cut(s) | 13, 166, 1624 |
| BstV2I | GAAGAC | 3 cut(s) | 12, 141, 1968 |
| BstX2I | RGATCY | 4 cut(s) | 245, 600, 878, 1211 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1872 |
| BstYI | RGATCY | 4 cut(s) | 245, 600, 878, 1211 |
| Bsu36I | CCTNAGG | 1 cut(s) | 741 |
| BsuRI | GGCC | 4 cut(s) | 1075, 1709, 1735, 1982 |
| BtgI | CCRYGG | 1 cut(s) | 1425 |
| BtsCI | GGATG | 8 cut(s) | 12, 666, 1123, 1240, 1272, 1328, 1462, 2157 |
| BtsI | GCAGTG | 1 cut(s) | 1596 |
| BtsIMutI | CAGTG | 2 cut(s) | 1141, 1596 |
| BveI | ACCTGC | 1 cut(s) | 1465 |
| Cac8I | GCNNGC | 2 cut(s) | 1707, 1922 |
| CfoI | GCGC | 2 cut(s) | 1617, 1887 |
| Cfr10I | RCCGGY | 1 cut(s) | 100 |
| Cfr13I | GGNCC | 5 cut(s) | 631, 1073, 1708, 1759, 1981 |
| CseI | GACGC | 4 cut(s) | 75, 93, 146, 323 |
| Csp6I | GTAC | 4 cut(s) | 405, 795, 930, 2041 |
| CviAII | CATG | 7 cut(s) | 50, 607, 1039, 1053, 1249, 2032, 2060 |
| CviQI | GTAC | 4 cut(s) | 405, 795, 930, 2041 |
| DdeI | CTNAG | 8 cut(s) | 741, 1017, 1102, 1145, 1208, 1311, 1380, 2086 |
| DriI | GACNNNNNGTC | 1 cut(s) | 526 |
| Eam1104I | CTCTTC | 1 cut(s) | 686 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 526 |
| EarI | CTCTTC | 1 cut(s) | 686 |
| EciI | GGCGGA | 1 cut(s) | 2151 |
| Eco130I | CCWWGG | 1 cut(s) | 1403 |
| Eco32I | GATATC | 2 cut(s) | 736, 1596 |
| Eco47I | GGWCC | 2 cut(s) | 631, 1759 |
| Eco57I | CTGAAG | 6 cut(s) | 273, 297, 667, 698, 849, 1317 |
| Eco81I | CCTNAGG | 1 cut(s) | 741 |
| Eco88I | CYCGRG | 1 cut(s) | 153 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1759 |
| EcoRI | GAATTC | 1 cut(s) | 1023 |
| EcoRII | CCWGG | 4 cut(s) | 850, 1462, 1887, 1983 |
| EcoRV | GATATC | 2 cut(s) | 736, 1596 |
| EcoT14I | CCWWGG | 1 cut(s) | 1403 |
| ErhI | CCWWGG | 1 cut(s) | 1403 |
| Esp3I | CGTCTC | 1 cut(s) | 111 |
| FaeI | CATG | 7 cut(s) | 53, 610, 1042, 1056, 1252, 2035, 2063 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 815, 847 |
| FaqI | GGGAC | 3 cut(s) | 376, 1074, 1772 |
| FatI | CATG | 7 cut(s) | 49, 606, 1038, 1052, 1248, 2031, 2059 |
| FbaI | TGATCA | 1 cut(s) | 622 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 180, 1613 |
| FokI | GGATG | 7 cut(s) | 673, 1130, 1247, 1279, 1335, 1469, 2144 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 180, 1613 |
| FspBI | CTAG | 7 cut(s) | 183, 414, 434, 798, 927, 936, 1668 |
| GlaI | GCGC | 2 cut(s) | 1616, 1886 |
| GluI | GCNGC | 3 cut(s) | 27, 180, 1613 |
| GsuI | CTGGAG | 1 cut(s) | 1446 |
| HaeII | RGCGCY | 2 cut(s) | 1618, 1888 |
| HaeIII | GGCC | 4 cut(s) | 1075, 1709, 1735, 1982 |
| HapII | CCGG | 3 cut(s) | 101, 1756, 1817 |
| HgaI | GACGC | 4 cut(s) | 75, 93, 146, 323 |
| HhaI | GCGC | 2 cut(s) | 1617, 1887 |
| Hin1I | GRCGYC | 2 cut(s) | 67, 104 |
| Hin1II | CATG | 7 cut(s) | 53, 610, 1042, 1056, 1252, 2035, 2063 |
| Hin6I | GCGC | 2 cut(s) | 1615, 1885 |
| HinP1I | GCGC | 2 cut(s) | 1615, 1885 |
| HindIII | AAGCTT | 4 cut(s) | 1514, 1542, 1601, 1904 |
| HpaII | CCGG | 3 cut(s) | 101, 1756, 1817 |
| HphI | GGTGA | 8 cut(s) | 601, 821, 885, 1181, 1241, 1535, 1903, 1988 |
| Hpy166II | GTNNAC | 2 cut(s) | 305, 893 |
| Hpy188III | TCNNGA | 7 cut(s) | 153, 155, 224, 629, 782, 1144, 1531 |
| Hpy8I | GTNNAC | 2 cut(s) | 305, 893 |
| Hpy99I | CGWCG | 1 cut(s) | 69 |
| HpyAV | CCTTC | 5 cut(s) | 1353, 1648, 1772, 1967, 2161 |
| HpyCH4III | ACNGT | 7 cut(s) | 404, 583, 779, 1136, 1954, 2045, 2126 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 661, 824, 1609, 1882 |
| HpyF3I | CTNAG | 8 cut(s) | 741, 1017, 1102, 1145, 1208, 1311, 1380, 2086 |
| Hsp92I | GRCGYC | 2 cut(s) | 67, 104 |
| Hsp92II | CATG | 7 cut(s) | 53, 610, 1042, 1056, 1252, 2035, 2063 |
| HspAI | GCGC | 2 cut(s) | 1615, 1885 |
| Ksp22I | TGATCA | 1 cut(s) | 622 |
| LmnI | GCTCC | 2 cut(s) | 1465, 1642 |
| Lsp1109I | GCAGC | 3 cut(s) | 13, 166, 1624 |
| LweI | GCATC | 5 cut(s) | 651, 1313, 1447, 1637, 2103 |
| MaeI | CTAG | 7 cut(s) | 183, 414, 434, 798, 927, 936, 1668 |
| MaeIII | GTNAC | 8 cut(s) | 71, 78, 998, 1136, 1169, 1281, 1891, 2146 |
| MfeI | CAATTG | 1 cut(s) | 1866 |
| MflI | RGATCY | 4 cut(s) | 245, 600, 878, 1211 |
| MlyI | GAGTC | 6 cut(s) | 158, 347, 1156, 1461, 1562, 1667 |
| MmeI | TCCRAC | 3 cut(s) | 669, 1936, 2190 |
| MroXI | GAANNNNTTC | 1 cut(s) | 680 |
| MseI | TTAA | 8 cut(s) | 371, 504, 1046, 1182, 1332, 1437, 1481, 1629 |
| MspA1I | CMGCKG | 1 cut(s) | 1914 |
| MspI | CCGG | 3 cut(s) | 101, 1756, 1817 |
| MspR9I | CCNGG | 5 cut(s) | 852, 1464, 1757, 1889, 1985 |
| MunI | CAATTG | 1 cut(s) | 1866 |
| Mva1269I | GAATGC | 3 cut(s) | 746, 1096, 2198 |
| MvaI | CCWGG | 4 cut(s) | 852, 1464, 1889, 1985 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 661, 824, 1609, 1882 |
| NciI | CCSGG | 1 cut(s) | 1757 |
| NlaIII | CATG | 7 cut(s) | 53, 610, 1042, 1056, 1252, 2035, 2063 |
| NlaIV | GGNNCC | 4 cut(s) | 1754, 1760, 2010, 2029 |
| NmuCI | GTSAC | 5 cut(s) | 998, 1136, 1169, 1281, 1891 |
| NspI | RCATGY | 1 cut(s) | 1252 |
| PaeR7I | CTCGAG | 1 cut(s) | 153 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 144, 1658 |
| PctI | GAATGC | 3 cut(s) | 746, 1096, 2198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 680 |
| PfeI | GAWTC | 5 cut(s) | 32, 1270, 1373, 1430, 1856 |
| PflFI | GACNNNGTC | 1 cut(s) | 140 |
| PfoI | TCCNGGA | 2 cut(s) | 850, 1462 |
| PkrI | GCNGC | 3 cut(s) | 28, 181, 1614 |
| PleI | GAGTC | 6 cut(s) | 157, 347, 1155, 1461, 1561, 1666 |
| PpsI | GAGTC | 6 cut(s) | 157, 347, 1155, 1461, 1561, 1666 |
| PpuMI | RGGWCCY | 1 cut(s) | 1759 |
| PshBI | ATTAAT | 1 cut(s) | 1481 |
| PsiI | TTATAA | 1 cut(s) | 2130 |
| Psp5II | RGGWCCY | 1 cut(s) | 1759 |
| Psp6I | CCWGG | 4 cut(s) | 850, 1462, 1887, 1983 |
| PspGI | CCWGG | 4 cut(s) | 850, 1462, 1887, 1983 |
| PspN4I | GGNNCC | 4 cut(s) | 1754, 1760, 2010, 2029 |
| PspPI | GGNCC | 5 cut(s) | 631, 1073, 1708, 1759, 1981 |
| PspPPI | RGGWCCY | 1 cut(s) | 1759 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2131, 2163 |
| PsuI | RGATCY | 4 cut(s) | 245, 600, 878, 1211 |
| PsyI | GACNNNGTC | 1 cut(s) | 140 |
| PvuII | CAGCTG | 1 cut(s) | 1914 |
| RsaI | GTAC | 4 cut(s) | 406, 796, 931, 2042 |
| RsaNI | GTAC | 4 cut(s) | 405, 795, 930, 2041 |
| SaqAI | TTAA | 8 cut(s) | 371, 504, 1046, 1182, 1332, 1437, 1481, 1629 |
| SatI | GCNGC | 3 cut(s) | 27, 180, 1613 |
| Sau96I | GGNCC | 5 cut(s) | 631, 1073, 1708, 1759, 1981 |
| ScaI | AGTACT | 2 cut(s) | 931, 2042 |
| SchI | GAGTC | 6 cut(s) | 158, 347, 1156, 1461, 1562, 1667 |
| ScrFI | CCNGG | 5 cut(s) | 852, 1464, 1757, 1889, 1985 |
| SfaNI | GCATC | 5 cut(s) | 651, 1313, 1447, 1637, 2103 |
| SfcI | CTRYAG | 3 cut(s) | 1077, 1357, 1915 |
| Sfr274I | CTCGAG | 1 cut(s) | 153 |
| SinI | GGWCC | 2 cut(s) | 631, 1759 |
| SlaI | CTCGAG | 1 cut(s) | 153 |
| SmlI | CTYRAG | 3 cut(s) | 153, 498, 1966 |
| SmoI | CTYRAG | 3 cut(s) | 153, 498, 1966 |
| SpeI | ACTAGT | 3 cut(s) | 797, 926, 935 |
| SsiI | CCGC | 1 cut(s) | 2136 |
| SspMI | CTAG | 7 cut(s) | 183, 414, 434, 798, 927, 936, 1668 |
| StyD4I | CCNGG | 5 cut(s) | 850, 1462, 1755, 1887, 1983 |
| StyI | CCWWGG | 1 cut(s) | 1403 |
| TaaI | ACNGT | 7 cut(s) | 404, 583, 779, 1136, 1954, 2045, 2126 |
| TaqI | TCGA | 5 cut(s) | 154, 294, 671, 1530, 1661 |
| TatI | WGTACW | 3 cut(s) | 404, 929, 2040 |
| TfiI | GAWTC | 5 cut(s) | 32, 1270, 1373, 1430, 1856 |
| Tru1I | TTAA | 8 cut(s) | 371, 504, 1046, 1182, 1332, 1437, 1481, 1629 |
| Tru9I | TTAA | 8 cut(s) | 371, 504, 1046, 1182, 1332, 1437, 1481, 1629 |
| TscAI | CASTG | 2 cut(s) | 1141, 1596 |
| TseFI | GTSAC | 5 cut(s) | 998, 1136, 1169, 1281, 1891 |
| TseI | GCWGC | 3 cut(s) | 26, 179, 1612 |
| Tsp45I | GTSAC | 5 cut(s) | 998, 1136, 1169, 1281, 1891 |
| TspGWI | ACGGA | 3 cut(s) | 45, 252, 1442 |
| TspRI | CASTG | 2 cut(s) | 1141, 1596 |
| Tth111I | GACNNNGTC | 1 cut(s) | 140 |
| VpaK11BI | GGWCC | 2 cut(s) | 631, 1759 |
| VspI | ATTAAT | 1 cut(s) | 1481 |
| XapI | RAATTY | 3 cut(s) | 694, 1023, 1042 |
| XceI | RCATGY | 1 cut(s) | 1252 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2020 |
| XhoI | CTCGAG | 1 cut(s) | 153 |
| XmnI | GAANNNNTTC | 1 cut(s) | 680 |
| XspI | CTAG | 7 cut(s) | 183, 414, 434, 798, 927, 936, 1668 |
| ZrmI | AGTACT | 2 cut(s) | 931, 2042 |