Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006596

Physical Location & Seq

Genomic Coordinates Reverse (-)

41517952 .. 41523399

Gene Structure 5448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG328400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGAAGACGACATCCCCAAATTGGCTGCTGATTCCGATGAGCTTGACCATGTTCCGTTGATACGACGCCGTAACCTGTTACTGGCTACCAAGCAAAAACCGACGTCTCTCATTGATATTGCTCTTAAACAAGAAGACGCAGTCTCCGAGTCTCGAGATGTGTTTTCTTTTCCTTGTGCTGCTAGAGAAGTGGGAGTTCAATTATTGGAACAAGAAGAACATCGGGATTTTGCAACTCCCAGAGGAGCTACACCTGAACTTCCGTTCTGCAAAACTGAAGTAGATTCTTCTGTCGATCAATGTTTACATAATGACGCTTTCAGCCGATGTGTGGAAATGACTGCTATCTGCGACTCCAATGGGACAAAGTTGAATACTTTTGCTTCTTCCGATCAGATTGACTGTACTAAACCTAGCATTGGTGTTGCTCAACTAAAGAGAATTGATGTTGATAGTTGCACTCTACCTGAAAATCCTACACTATCAGAAGTTTCTGCTGAAGTTAAGGTTGCTTACCCTGACAACTTGTCAAGCTCATTTGGAGATGGAATGAATGGCTTTGCTGGTTCTCGTGTGCAGACTGTTATGGTGAAAAATGAAATCTCCATGCACTCTACTTATGATCATCTGGACCACATTGCCCTGAAAGAGCGGCAAAGGATGCTACTAGCAAGGAAACTCTTCAGGTTGGAAAATTCAGTTTCGGAGGATATCCCTGAGGCATTCTCGGAAGATGTTTTGCAACAACTTGACAGTCAAGAAAAGGGAGGTACTAGTATTGTTGGTGAAGAAGCTGTAAAGGCTACCTTTCAGCCTTATGACAATCCTGGAACAAATGCTTCAGTTCTTTGTAGATCTATGATCAGTTCACCACAACAGAATGTTGCTTTCTCATCATCTACTAGTACTACTAGTCAATTTTCATTTGATGTAGCTAAATCTAAATCAAACGATTATAGGAAAAGTTCTGAAAGTGACAAGATATGCTCATCTGAGAGAATTCCCCCTACTGCCATGAATTTAAGTCCATGTGGGGGACAAGATGATGGGCCTACAGGCACAAGTAGAGTGCATTCCTCAGTCAAAATAAAGGATGAACCTTTGGACAACAGTGACTTCCTGAGTCTGGGCAGATGTGTTAGGGGTGACTTCTCTCTTAACATACTTCCTGTAAAGCAAGAACTTAGATCTACCAACAAAATTGGTGACGATGAGATAGACAATATGCTGCTGCGAGATCGGATGAATCTATTGGTGTCACAAGAGAACTCTGAAGTGAGAATGTCTAAGAACTATGGATGCTTGGTTAAAATTGTGCCTTCTGCCGTTAGCTGTAGCCCTATTTCCGAATCTGCTAAGCCTATAAGCATTAGTCGTCCAAGGAAAAGGAAAAAGACTGCCACGGATTCTATTAAAACAGCTTTGGAGGAGGATGCTCCAGGACTCTTGCAGGTATTAATTGACAAGGGGGTATTGGTTGATGAAATCAAGCTTTATGGTGAGATCGAGAGTGATGAAGCTTTAGATGAGTCTTTTCGTGAAGATAGCTTTGCACAGCTTGAAGCAGTGATATCAAAGCTTTTCTCGCAGCGCCAGTCGTTTTTTAAGTTTGCTCCAATACGATGCACGAAGGAGTCGAGGGCTAGTTATTGCTTGGCTTGTCTAATTTCACTTGTAGAGCAGGCCCGATATTTGCAGTTTAGAAACTGGCCTGTTGAATGGGGTTGGTGCCGGGACCTTCAATCGTTTATATTTGTCTTTGCGAGACATAATAGAATTGTGCTTGAACGACCGGAATATGGCTATGCAACATACTTCTTTGAGCTAGTAGATTCACTACCAATTGAATGGCAGATCAAGCGCCTGGTGACTGCAATGAAGCTTACCAGCTGTAGCAGGCTTTCTCTAATTGAGAATAAAGCACTAACGGTAAACATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

646

Amino Acids

72.09

Weight (kDa)

5.13

Isoelectric Point (pI)

53.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16610 AT5G16610 AT5G16610
fragaria_vesca	FvH4_1g25400
malus_domestica	MD15G1138100.v1.1
prunus_persica	Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1 Prupe.4G281200_v2.0.a1
pyrus_communis	pycom15g12440
rosa_chinensis	RchiOBHm_Chr2g0123431
rosa_laevigata	RLG00000018748 RLG00000018755
rosa_multiflora	Rmu_sc0005876.1_g000009
rosa_roxburghii	Rroxscaffold_2G00120670
rosa_rugosa	Rorug02G0245500 Rorug02G0245600 Rorug02G0245700 Rorug02G0245800
rosa_samantha	Rh2AG304400 Rh2BG312400 Rh2CG290900 Rh2DG328400
rosa_wichuraiana	Rw2G024370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	107
Acc36I	ACCTGC	1 cut(s)	1441
AccB1I	GGYRCC	1 cut(s)	1728
AccBSI	CCGCTC	1 cut(s)	652
AciI	CCGC	1 cut(s)	652
AcsI	RAATTY	3 cut(s)	694, 999, 1018
AcuI	CTGAAG	5 cut(s)	297, 519, 667, 825, 1293
AcyI	GRCGYC	2 cut(s)	67, 104
AfaI	GTAC	3 cut(s)	406, 772, 907
AfiI	CCNNNNNNNGG	7 cut(s)	22, 82, 331, 419, 1034, 1126, 1799
AgsI	TTSAA	7 cut(s)	200, 373, 1562, 1718, 1742, 1787, 1847
AhdI	GACNNNNNGTC	1 cut(s)	526
AhlI	ACTAGT	3 cut(s)	773, 902, 911
AjnI	CCWGG	3 cut(s)	826, 1438, 1863
Alw26I	GTCTC	4 cut(s)	111, 148, 156, 1759
Ama87I	CYCGRG	1 cut(s)	153
AoxI	GGCC	3 cut(s)	1049, 1683, 1709
ApeKI	GCWGC	5 cut(s)	26, 179, 1228, 1231, 1588
ApoI	RAATTY	3 cut(s)	694, 999, 1018
AseI	ATTAAT	1 cut(s)	1457
Asp700I	GAANNNNTTC	1 cut(s)	680
AspLEI	GCGC	2 cut(s)	1593, 1863
AspS9I	GGNCC	4 cut(s)	631, 1049, 1684, 1735
AsuC2I	CCSGG	1 cut(s)	1733
AsuHPI	GGTGA	7 cut(s)	601, 797, 861, 1157, 1217, 1511, 1879
AvaI	CYCGRG	1 cut(s)	153
AvaII	GGWCC	2 cut(s)	631, 1735
AxyI	CCTNAGG	1 cut(s)	717
BanI	GGYRCC	1 cut(s)	1728
BauI	CACGAG	1 cut(s)	570
BbsI	GAAGAC	2 cut(s)	12, 141
BbvI	GCAGC	5 cut(s)	13, 166, 1215, 1218, 1600
BccI	CCATC	2 cut(s)	539, 1040
BceAI	ACGGC	2 cut(s)	54, 1310
BciT130I	CCWGG	3 cut(s)	828, 1440, 1865
BclI	TGATCA	2 cut(s)	622, 861
BcnI	CCSGG	1 cut(s)	1733
BcoDI	GTCTC	4 cut(s)	111, 148, 156, 1759
BcuI	ACTAGT	3 cut(s)	773, 902, 911
BfaI	CTAG	8 cut(s)	183, 414, 668, 774, 903, 912, 1644, 1826
BfmI	CTRYAG	3 cut(s)	1053, 1333, 1891
BfoI	RGCGCY	2 cut(s)	1594, 1864
BfuAI	ACCTGC	1 cut(s)	1441
BglII	AGATCT	2 cut(s)	854, 1187
BisI	GCNGC	6 cut(s)	27, 180, 653, 1229, 1232, 1589
BlpI	GCTNAGC	1 cut(s)	1356
BlsI	GCNGC	6 cut(s)	28, 181, 654, 1230, 1233, 1590
BmcAI	AGTACT	1 cut(s)	907
Bme1390I	CCNGG	4 cut(s)	828, 1440, 1733, 1865
Bme18I	GGWCC	2 cut(s)	631, 1735
BmeRI	GACNNNNNGTC	1 cut(s)	526
BmeT110I	CYCGRG	1 cut(s)	153
BmgT120I	GGNCC	4 cut(s)	631, 1049, 1684, 1735
BmiI	GGNNCC	2 cut(s)	1730, 1736
BmrFI	CCNGG	4 cut(s)	828, 1440, 1733, 1865
BmsI	GCATC	4 cut(s)	651, 1289, 1423, 1613
BpiI	GAAGAC	2 cut(s)	12, 141
BplI	GAGNNNNNCTC	2 cut(s)	710, 742
BpmI	CTGGAG	1 cut(s)	1422
Bpu1102I	GCTNAGC	1 cut(s)	1356
BpuMI	CCSGG	1 cut(s)	1733
BsaHI	GRCGYC	2 cut(s)	67, 104
BsaJI	CCNNGG	2 cut(s)	1379, 1401
BsaWI	WCCGGW	1 cut(s)	1792
BsaXI	ACNNNNNCTCC	2 cut(s)	128, 158
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 82, 331, 419, 1034, 1126, 1799
Bse1I	ACTGG	3 cut(s)	87, 1594, 1712
Bse21I	CCTNAGG	1 cut(s)	717
Bse3DI	GCAATG	2 cut(s)	636, 1881
BseBI	CCWGG	3 cut(s)	828, 1440, 1865
BseDI	CCNNGG	2 cut(s)	1379, 1401
BseGI	GGATG	6 cut(s)	12, 666, 1099, 1248, 1304, 1438
BseLI	CCNNNNNNNGG	7 cut(s)	22, 82, 331, 419, 1034, 1126, 1799
BseMI	GCAATG	2 cut(s)	636, 1881
BseMII	CTCAG	4 cut(s)	708, 984, 1092, 1112
BseNI	ACTGG	3 cut(s)	87, 1594, 1712
BseRI	GAGGAG	2 cut(s)	258, 1442
BseXI	GCAGC	5 cut(s)	13, 166, 1215, 1218, 1600
BsgI	GTGCAG	1 cut(s)	596
Bsh1285I	CGRYCG	1 cut(s)	1793
BshFI	GGCC	3 cut(s)	1051, 1685, 1711
BshNI	GGYRCC	1 cut(s)	1728
BsiEI	CGRYCG	1 cut(s)	1793
BsiHKCI	CYCGRG	1 cut(s)	153
BsiSI	CCGG	2 cut(s)	1732, 1793
BslFI	GGGAC	3 cut(s)	376, 1050, 1748
BslI	CCNNNNNNNGG	7 cut(s)	22, 82, 331, 419, 1034, 1126, 1799
BsmAI	GTCTC	4 cut(s)	111, 148, 156, 1759
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	3 cut(s)	376, 1050, 1748
BsmI	GAATGC	2 cut(s)	722, 1072
BsnI	GGCC	3 cut(s)	1051, 1685, 1711
BsoBI	CYCGRG	1 cut(s)	153
Bsp143I	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
Bsp1720I	GCTNAGC	1 cut(s)	1356
BspACI	CCGC	1 cut(s)	652
BspANI	GGCC	3 cut(s)	1051, 1685, 1711
BspCNI	CTCAG	4 cut(s)	709, 985, 1091, 1113
BspLI	GGNNCC	2 cut(s)	1730, 1736
BspMI	ACCTGC	1 cut(s)	1441
BspT107I	GGYRCC	1 cut(s)	1728
BsrBI	CCGCTC	1 cut(s)	652
BsrDI	GCAATG	2 cut(s)	636, 1881
BsrI	ACTGG	3 cut(s)	87, 1594, 1712
BssECI	CCNNGG	2 cut(s)	1379, 1401
BssMI	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
BssNI	GRCGYC	2 cut(s)	67, 104
BssSI	CACGAG	1 cut(s)	570
BssT1I	CCWWGG	1 cut(s)	1379
Bst2BI	CACGAG	1 cut(s)	570
Bst2UI	CCWGG	3 cut(s)	828, 1440, 1865
Bst4CI	ACNGT	5 cut(s)	404, 583, 755, 1112, 1930
Bst6I	CTCTTC	1 cut(s)	686
BstACI	GRCGYC	2 cut(s)	67, 104
BstAPI	GCANNNNNTGC	1 cut(s)	661
BstC8I	GCNNGC	2 cut(s)	1683, 1898
BstDEI	CTNAG	7 cut(s)	717, 993, 1078, 1121, 1184, 1287, 1356
BstDSI	CCRYGG	1 cut(s)	1401
BstF5I	GGATG	6 cut(s)	12, 666, 1099, 1248, 1304, 1438
BstH2I	RGCGCY	2 cut(s)	1594, 1864
BstHHI	GCGC	2 cut(s)	1593, 1863
BstKTI	GATC	9 cut(s)	298, 394, 625, 857, 864, 1190, 1240, 1506, 1857
BstMAI	GTCTC	4 cut(s)	111, 148, 156, 1759
BstMBI	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
BstMCI	CGRYCG	1 cut(s)	1793
BstMWI	GCNNNNNNNGC	4 cut(s)	661, 800, 1585, 1858
BstNI	CCWGG	3 cut(s)	828, 1440, 1865
BstSCI	CCNGG	4 cut(s)	826, 1438, 1731, 1863
BstSFI	CTRYAG	3 cut(s)	1053, 1333, 1891
BstV1I	GCAGC	5 cut(s)	13, 166, 1215, 1218, 1600
BstV2I	GAAGAC	2 cut(s)	12, 141
BstX2I	RGATCY	2 cut(s)	854, 1187
BstXI	CCANNNNNNTGG	1 cut(s)	1848
BstYI	RGATCY	2 cut(s)	854, 1187
Bsu36I	CCTNAGG	1 cut(s)	717
BsuRI	GGCC	3 cut(s)	1051, 1685, 1711
BtgI	CCRYGG	1 cut(s)	1401
BtsCI	GGATG	6 cut(s)	12, 666, 1099, 1248, 1304, 1438
BtsI	GCAGTG	1 cut(s)	1572
BtsIMutI	CAGTG	2 cut(s)	1117, 1572
BveI	ACCTGC	1 cut(s)	1441
Cac8I	GCNNGC	2 cut(s)	1683, 1898
CfoI	GCGC	2 cut(s)	1593, 1863
Cfr13I	GGNCC	4 cut(s)	631, 1049, 1684, 1735
CseI	GACGC	3 cut(s)	75, 146, 323
Csp6I	GTAC	3 cut(s)	405, 771, 906
CviAII	CATG	4 cut(s)	50, 607, 1015, 1029
CviQI	GTAC	3 cut(s)	405, 771, 906
DdeI	CTNAG	7 cut(s)	717, 993, 1078, 1121, 1184, 1287, 1356
DpnI	GATC	9 cut(s)	297, 393, 624, 856, 863, 1189, 1239, 1505, 1856
DpnII	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
DriI	GACNNNNNGTC	1 cut(s)	526
Eam1104I	CTCTTC	1 cut(s)	686
Eam1105I	GACNNNNNGTC	1 cut(s)	526
EarI	CTCTTC	1 cut(s)	686
Eco130I	CCWWGG	1 cut(s)	1379
Eco32I	GATATC	2 cut(s)	712, 1572
Eco47I	GGWCC	2 cut(s)	631, 1735
Eco57I	CTGAAG	5 cut(s)	297, 519, 667, 825, 1293
Eco81I	CCTNAGG	1 cut(s)	717
Eco88I	CYCGRG	1 cut(s)	153
EcoO109I	RGGNCCY	1 cut(s)	1735
EcoRI	GAATTC	1 cut(s)	999
EcoRII	CCWGG	3 cut(s)	826, 1438, 1863
EcoRV	GATATC	2 cut(s)	712, 1572
EcoT14I	CCWWGG	1 cut(s)	1379
ErhI	CCWWGG	1 cut(s)	1379
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	4 cut(s)	53, 610, 1018, 1032
FalI	AAGNNNNNCTT	2 cut(s)	791, 823
FaqI	GGGAC	3 cut(s)	376, 1050, 1748
FatI	CATG	4 cut(s)	49, 606, 1014, 1028
FbaI	TGATCA	2 cut(s)	622, 861
Fnu4HI	GCNGC	6 cut(s)	27, 180, 653, 1229, 1232, 1589
FokI	GGATG	5 cut(s)	673, 1106, 1255, 1311, 1445
Fsp4HI	GCNGC	6 cut(s)	27, 180, 653, 1229, 1232, 1589
FspBI	CTAG	8 cut(s)	183, 414, 668, 774, 903, 912, 1644, 1826
GlaI	GCGC	2 cut(s)	1592, 1862
GluI	GCNGC	6 cut(s)	27, 180, 653, 1229, 1232, 1589
GsuI	CTGGAG	1 cut(s)	1422
HaeII	RGCGCY	2 cut(s)	1594, 1864
HaeIII	GGCC	3 cut(s)	1051, 1685, 1711
HapII	CCGG	2 cut(s)	1732, 1793
HgaI	GACGC	3 cut(s)	75, 146, 323
HhaI	GCGC	2 cut(s)	1593, 1863
Hin1I	GRCGYC	2 cut(s)	67, 104
Hin1II	CATG	4 cut(s)	53, 610, 1018, 1032
Hin6I	GCGC	2 cut(s)	1591, 1861
HinP1I	GCGC	2 cut(s)	1591, 1861
HindIII	AAGCTT	4 cut(s)	1490, 1518, 1577, 1880
HpaII	CCGG	2 cut(s)	1732, 1793
HphI	GGTGA	7 cut(s)	601, 797, 861, 1157, 1217, 1511, 1879
Hpy166II	GTNNAC	3 cut(s)	305, 869, 1933
Hpy188III	TCNNGA	8 cut(s)	153, 155, 224, 629, 758, 1120, 1507, 1538
Hpy8I	GTNNAC	3 cut(s)	305, 869, 1933
Hpy99I	CGWCG	2 cut(s)	69, 106
HpyAV	CCTTC	3 cut(s)	1329, 1624, 1748
HpyCH4III	ACNGT	5 cut(s)	404, 583, 755, 1112, 1930
HpyCH4IV	ACGT	1 cut(s)	104
HpyF10VI	GCNNNNNNNGC	4 cut(s)	661, 800, 1585, 1858
HpyF3I	CTNAG	7 cut(s)	717, 993, 1078, 1121, 1184, 1287, 1356
HpySE526I	ACGT	1 cut(s)	104
Hsp92I	GRCGYC	2 cut(s)	67, 104
Hsp92II	CATG	4 cut(s)	53, 610, 1018, 1032
HspAI	GCGC	2 cut(s)	1591, 1861
Ksp22I	TGATCA	2 cut(s)	622, 861
Kzo9I	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
LmnI	GCTCC	3 cut(s)	245, 1441, 1618
Lsp1109I	GCAGC	5 cut(s)	13, 166, 1215, 1218, 1600
LweI	GCATC	4 cut(s)	651, 1289, 1423, 1613
MaeI	CTAG	8 cut(s)	183, 414, 668, 774, 903, 912, 1644, 1826
MaeII	ACGT	1 cut(s)	104
MaeIII	GTNAC	8 cut(s)	71, 78, 974, 1112, 1145, 1205, 1257, 1867
MalI	GATC	9 cut(s)	297, 393, 624, 856, 863, 1189, 1239, 1505, 1856
MbiI	CCGCTC	1 cut(s)	652
MboI	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
MboII	GAAGA	9 cut(s)	17, 146, 227, 279, 378, 673, 743, 800, 1553
MfeI	CAATTG	1 cut(s)	1842
MflI	RGATCY	2 cut(s)	854, 1187
MlyI	GAGTC	6 cut(s)	158, 347, 1132, 1437, 1538, 1643
MmeI	TCCRAC	1 cut(s)	669
MnlI	CCTC	8 cut(s)	236, 700, 712, 761, 1087, 1420, 1423, 1632
MroXI	GAANNNNTTC	1 cut(s)	680
MseI	TTAA	8 cut(s)	126, 504, 1022, 1158, 1308, 1413, 1457, 1605
MspA1I	CMGCKG	1 cut(s)	1890
MspI	CCGG	2 cut(s)	1732, 1793
MspR9I	CCNGG	4 cut(s)	828, 1440, 1733, 1865
MunI	CAATTG	1 cut(s)	1842
Mva1269I	GAATGC	2 cut(s)	722, 1072
MvaI	CCWGG	3 cut(s)	828, 1440, 1865
MwoI	GCNNNNNNNGC	4 cut(s)	661, 800, 1585, 1858
NciI	CCSGG	1 cut(s)	1733
NdeII	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
NlaIII	CATG	4 cut(s)	53, 610, 1018, 1032
NlaIV	GGNNCC	2 cut(s)	1730, 1736
NmuCI	GTSAC	6 cut(s)	974, 1112, 1145, 1205, 1257, 1867
PaeR7I	CTCGAG	1 cut(s)	153
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 1634
PctI	GAATGC	2 cut(s)	722, 1072
PdmI	GAANNNNTTC	1 cut(s)	680
PfeI	GAWTC	6 cut(s)	32, 284, 1246, 1349, 1406, 1832
PflFI	GACNNNGTC	1 cut(s)	140
PfoI	TCCNGGA	2 cut(s)	826, 1438
PkrI	GCNGC	6 cut(s)	28, 181, 654, 1230, 1233, 1590
PleI	GAGTC	6 cut(s)	157, 347, 1131, 1437, 1537, 1642
PpsI	GAGTC	6 cut(s)	157, 347, 1131, 1437, 1537, 1642
PpuMI	RGGWCCY	1 cut(s)	1735
PshBI	ATTAAT	1 cut(s)	1457
Psp5II	RGGWCCY	1 cut(s)	1735
Psp6I	CCWGG	3 cut(s)	826, 1438, 1863
PspGI	CCWGG	3 cut(s)	826, 1438, 1863
PspN4I	GGNNCC	2 cut(s)	1730, 1736
PspPI	GGNCC	4 cut(s)	631, 1049, 1684, 1735
PspPPI	RGGWCCY	1 cut(s)	1735
PsuI	RGATCY	2 cut(s)	854, 1187
PsyI	GACNNNGTC	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	1890
RsaI	GTAC	3 cut(s)	406, 772, 907
RsaNI	GTAC	3 cut(s)	405, 771, 906
SaqAI	TTAA	8 cut(s)	126, 504, 1022, 1158, 1308, 1413, 1457, 1605
SatI	GCNGC	6 cut(s)	27, 180, 653, 1229, 1232, 1589
Sau3AI	GATC	9 cut(s)	295, 391, 622, 854, 861, 1187, 1237, 1503, 1854
Sau96I	GGNCC	4 cut(s)	631, 1049, 1684, 1735
ScaI	AGTACT	1 cut(s)	907
SchI	GAGTC	6 cut(s)	158, 347, 1132, 1437, 1538, 1643
ScrFI	CCNGG	4 cut(s)	828, 1440, 1733, 1865
SfaNI	GCATC	4 cut(s)	651, 1289, 1423, 1613
SfcI	CTRYAG	3 cut(s)	1053, 1333, 1891
Sfr274I	CTCGAG	1 cut(s)	153
SinI	GGWCC	2 cut(s)	631, 1735
SlaI	CTCGAG	1 cut(s)	153
SmlI	CTYRAG	1 cut(s)	153
SmoI	CTYRAG	1 cut(s)	153
SpeI	ACTAGT	3 cut(s)	773, 902, 911
SsiI	CCGC	1 cut(s)	652
SspMI	CTAG	8 cut(s)	183, 414, 668, 774, 903, 912, 1644, 1826
StyD4I	CCNGG	4 cut(s)	826, 1438, 1731, 1863
StyI	CCWWGG	1 cut(s)	1379
TaaI	ACNGT	5 cut(s)	404, 583, 755, 1112, 1930
TaiI	ACGT	1 cut(s)	107
TaqI	TCGA	4 cut(s)	154, 294, 1506, 1637
TatI	WGTACW	2 cut(s)	404, 905
TauI	GCSGC	1 cut(s)	655
TfiI	GAWTC	6 cut(s)	32, 284, 1246, 1349, 1406, 1832
Tru1I	TTAA	8 cut(s)	126, 504, 1022, 1158, 1308, 1413, 1457, 1605
Tru9I	TTAA	8 cut(s)	126, 504, 1022, 1158, 1308, 1413, 1457, 1605
TscAI	CASTG	2 cut(s)	1117, 1572
TseFI	GTSAC	6 cut(s)	974, 1112, 1145, 1205, 1257, 1867
TseI	GCWGC	5 cut(s)	26, 179, 1228, 1231, 1588
Tsp45I	GTSAC	6 cut(s)	974, 1112, 1145, 1205, 1257, 1867
TspDTI	ATGAA	9 cut(s)	566, 612, 912, 1031, 1110, 1259, 1497, 1530, 1892
TspGWI	ACGGA	3 cut(s)	45, 252, 1418
TspRI	CASTG	2 cut(s)	1117, 1572
Tth111I	GACNNNGTC	1 cut(s)	140
VpaK11BI	GGWCC	2 cut(s)	631, 1735
VspI	ATTAAT	1 cut(s)	1457
XapI	RAATTY	3 cut(s)	694, 999, 1018
XhoI	CTCGAG	1 cut(s)	153
XmnI	GAANNNNTTC	1 cut(s)	680
XspI	CTAG	8 cut(s)	183, 414, 668, 774, 903, 912, 1644, 1826
ZraI	GACGTC	1 cut(s)	105
ZrmI	AGTACT	1 cut(s)	907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.