PB1 domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g03810 |
| malus_domestica | MD02G1036600.v1.1 MD15G1176700.v1.1 |
| prunus_persica | Prupe.7G238800_v2.0.a1 |
| pyrus_communis | pycom02g03010 pycom15g15820 |
| rosa_chinensis | RchiOBHm_Chr2g0089211 |
| rosa_laevigata | RLG00000016005 |
| rosa_multiflora | Rmu_sc0008322.1_g000024 Rmu_sc0030891.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152140 |
| rosa_rugosa | Rorug01G0488400 Rorug01G0488500 |
| rosa_samantha | Rh2AG044100 Rh2BG042800 Rh2CG044300 Rh2DG043100 |
| rosa_wichuraiana | Rw2G003900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1590, 2279 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1976 |
| Acc36I | ACCTGC | 1 cut(s) | 3036 |
| Acc65I | GGTACC | 1 cut(s) | 2900 |
| AccB1I | GGYRCC | 1 cut(s) | 2900 |
| AccBSI | CCGCTC | 3 cut(s) | 612, 1218, 2934 |
| AccI | GTMKAC | 1 cut(s) | 2970 |
| AccII | CGCG | 2 cut(s) | 407, 3186 |
| AccIII | TCCGGA | 1 cut(s) | 1790 |
| AclI | AACGTT | 2 cut(s) | 1077, 2633 |
| AclWI | GGATC | 8 cut(s) | 318, 1315, 1328, 1745, 2258, 2271, 3092, 3134 |
| AcsI | RAATTY | 3 cut(s) | 1378, 1774, 2212 |
| AcuI | CTGAAG | 3 cut(s) | 194, 2354, 2520 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 221, 365, 992, 1371, 2910, 3034, 3150 |
| AflII | CTTAAG | 1 cut(s) | 1210 |
| AflIII | ACRYGT | 1 cut(s) | 583 |
| AgsI | TTSAA | 8 cut(s) | 193, 1384, 1500, 1886, 1954, 2665, 2806, 2966 |
| AhlI | ACTAGT | 1 cut(s) | 749 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1426, 1458 |
| Alw21I | GWGCWC | 1 cut(s) | 622 |
| Alw26I | GTCTC | 5 cut(s) | 813, 1410, 1984, 3018, 3074 |
| AlwI | GGATC | 8 cut(s) | 318, 1315, 1328, 1745, 2258, 2271, 3092, 3134 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1408 |
| Ama87I | CYCGRG | 1 cut(s) | 452 |
| Aor13HI | TCCGGA | 1 cut(s) | 1790 |
| AoxI | GGCC | 8 cut(s) | 146, 249, 1092, 1373, 1561, 1993, 2295, 3152 |
| ApeKI | GCWGC | 5 cut(s) | 186, 973, 2336, 2732, 3197 |
| ApoI | RAATTY | 3 cut(s) | 1378, 1774, 2212 |
| AseI | ATTAAT | 2 cut(s) | 1965, 3116 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1776 |
| Asp718I | GGTACC | 1 cut(s) | 2900 |
| AspLEI | GCGC | 5 cut(s) | 200, 973, 1821, 3033, 3188 |
| AspS9I | GGNCC | 8 cut(s) | 147, 268, 591, 666, 1562, 1994, 2612, 2815 |
| AsuC2I | CCSGG | 3 cut(s) | 223, 993, 1365 |
| AvaI | CYCGRG | 1 cut(s) | 452 |
| AvaII | GGWCC | 5 cut(s) | 268, 591, 666, 2612, 2815 |
| BamHI | GGATCC | 2 cut(s) | 1320, 2263 |
| BanI | GGYRCC | 1 cut(s) | 2900 |
| BanII | GRGCYC | 1 cut(s) | 622 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 218, 250, 2538, 2570 |
| BbsI | GAAGAC | 3 cut(s) | 1170, 1700, 2508 |
| Bbv12I | GWGCWC | 1 cut(s) | 622 |
| BbvCI | CCTCAGC | 1 cut(s) | 2820 |
| BbvI | GCAGC | 5 cut(s) | 173, 960, 2323, 2744, 3184 |
| BccI | CCATC | 5 cut(s) | 554, 1309, 1892, 2603, 2908 |
| BceAI | ACGGC | 3 cut(s) | 211, 720, 1975 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 705, 739 |
| BciVI | GTATCC | 1 cut(s) | 1176 |
| BclI | TGATCA | 2 cut(s) | 808, 1518 |
| BcnI | CCSGG | 3 cut(s) | 223, 993, 1365 |
| BcoDI | GTCTC | 5 cut(s) | 813, 1410, 1984, 3018, 3074 |
| BcuI | ACTAGT | 1 cut(s) | 749 |
| BfaI | CTAG | 5 cut(s) | 750, 1254, 2354, 2558, 3150 |
| BfmI | CTRYAG | 2 cut(s) | 1566, 2127 |
| BfrI | CTTAAG | 1 cut(s) | 1210 |
| BfuAI | ACCTGC | 1 cut(s) | 3036 |
| BfuI | GTATCC | 1 cut(s) | 1176 |
| BglII | AGATCT | 2 cut(s) | 1714, 2131 |
| Bme1390I | CCNGG | 3 cut(s) | 223, 993, 1365 |
| Bme18I | GGWCC | 5 cut(s) | 268, 591, 666, 2612, 2815 |
| BmeT110I | CYCGRG | 1 cut(s) | 452 |
| BmgT120I | GGNCC | 8 cut(s) | 147, 268, 591, 666, 1562, 1994, 2612, 2815 |
| BmrFI | CCNGG | 3 cut(s) | 223, 993, 1365 |
| BmrI | ACTGGG | 3 cut(s) | 1929, 2153, 3015 |
| BmsI | GCATC | 3 cut(s) | 1240, 1806, 2719 |
| BmuI | ACTGGG | 3 cut(s) | 1929, 2153, 3015 |
| BpiI | GAAGAC | 3 cut(s) | 1170, 1700, 2508 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2803, 2835 |
| BpmI | CTGGAG | 1 cut(s) | 2308 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1455, 2820 |
| BpuEI | CTTGAG | 3 cut(s) | 329, 2346, 2414 |
| BpuMI | CCSGG | 3 cut(s) | 223, 993, 1365 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1319, 1755 |
| BsaI | GGTCTC | 2 cut(s) | 1984, 3018 |
| BsaJI | CCNNGG | 4 cut(s) | 264, 473, 1363, 2909 |
| BsaWI | WCCGGW | 1 cut(s) | 1790 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 221, 365, 992, 1371, 2910, 3034, 3150 |
| Bse1I | ACTGG | 8 cut(s) | 1636, 1729, 1924, 2159, 2325, 2615, 2828, 3010 |
| Bse3DI | GCAATG | 4 cut(s) | 1050, 1386, 1445, 2730 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1319, 1755 |
| BseAI | TCCGGA | 1 cut(s) | 1790 |
| BseDI | CCNNGG | 4 cut(s) | 264, 473, 1363, 2909 |
| BseGI | GGATG | 9 cut(s) | 835, 1420, 1488, 1880, 1903, 2039, 2146, 2734, 2919 |
| BseJI | GATNNNNATC | 2 cut(s) | 1319, 1755 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 221, 365, 992, 1371, 2910, 3034, 3150 |
| BseMI | GCAATG | 4 cut(s) | 1050, 1386, 1445, 2730 |
| BseMII | CTCAG | 6 cut(s) | 674, 1302, 1400, 1446, 2834, 3177 |
| BseNI | ACTGG | 8 cut(s) | 1636, 1729, 1924, 2159, 2325, 2615, 2828, 3010 |
| BseRI | GAGGAG | 1 cut(s) | 2264 |
| BseXI | GCAGC | 5 cut(s) | 173, 960, 2323, 2744, 3184 |
| BseYI | CCCAGC | 3 cut(s) | 320, 1049, 1996 |
| Bsh1236I | CGCG | 2 cut(s) | 407, 3186 |
| Bsh1285I | CGRYCG | 1 cut(s) | 222 |
| BshFI | GGCC | 8 cut(s) | 148, 251, 1094, 1375, 1563, 1995, 2297, 3154 |
| BshNI | GGYRCC | 1 cut(s) | 2900 |
| BsiEI | CGRYCG | 1 cut(s) | 222 |
| BsiHKAI | GWGCWC | 1 cut(s) | 622 |
| BsiHKCI | CYCGRG | 1 cut(s) | 452 |
| BsiSI | CCGG | 8 cut(s) | 222, 366, 372, 669, 908, 992, 1365, 1791 |
| BsiWI | CGTACG | 1 cut(s) | 661 |
| BslFI | GGGAC | 3 cut(s) | 454, 604, 2828 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 221, 365, 992, 1371, 2910, 3034, 3150 |
| BsmAI | GTCTC | 5 cut(s) | 813, 1410, 1984, 3018, 3074 |
| BsmFI | GGGAC | 3 cut(s) | 454, 604, 2828 |
| BsmI | GAATGC | 2 cut(s) | 200, 2588 |
| BsnI | GGCC | 8 cut(s) | 148, 251, 1094, 1375, 1563, 1995, 2297, 3154 |
| Bso31I | GGTCTC | 2 cut(s) | 1984, 3018 |
| BsoBI | CYCGRG | 1 cut(s) | 452 |
| Bsp1286I | GDGCHC | 1 cut(s) | 622 |
| Bsp13I | TCCGGA | 1 cut(s) | 1790 |
| Bsp1407I | TGTACA | 1 cut(s) | 8 |
| Bsp19I | CCATGG | 1 cut(s) | 2909 |
| BspANI | GGCC | 8 cut(s) | 148, 251, 1094, 1375, 1563, 1995, 2297, 3154 |
| BspCNI | CTCAG | 6 cut(s) | 675, 1303, 1401, 1447, 2833, 3176 |
| BspEI | TCCGGA | 1 cut(s) | 1790 |
| BspFNI | CGCG | 2 cut(s) | 407, 3186 |
| BspHI | TCATGA | 4 cut(s) | 1653, 1834, 2400, 2755 |
| BspMAI | CTGCAG | 1 cut(s) | 1570 |
| BspMI | ACCTGC | 1 cut(s) | 3036 |
| BspPI | GGATC | 8 cut(s) | 318, 1315, 1328, 1745, 2258, 2271, 3092, 3134 |
| BspT107I | GGYRCC | 1 cut(s) | 2900 |
| BspTI | CTTAAG | 1 cut(s) | 1210 |
| BspTNI | GGTCTC | 2 cut(s) | 1984, 3018 |
| BsrBI | CCGCTC | 3 cut(s) | 612, 1218, 2934 |
| BsrDI | GCAATG | 4 cut(s) | 1050, 1386, 1445, 2730 |
| BsrGI | TGTACA | 1 cut(s) | 8 |
| BsrI | ACTGG | 8 cut(s) | 1636, 1729, 1924, 2159, 2325, 2615, 2828, 3010 |
| BssECI | CCNNGG | 4 cut(s) | 264, 473, 1363, 2909 |
| BssT1I | CCWWGG | 2 cut(s) | 473, 2909 |
| Bst4CI | ACNGT | 8 cut(s) | 61, 272, 464, 666, 2034, 2434, 2509, 2905 |
| Bst6I | CTCTTC | 2 cut(s) | 432, 2074 |
| BstAFI | CTTAAG | 1 cut(s) | 1210 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2729 |
| BstAUI | TGTACA | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 6 cut(s) | 215, 714, 978, 1461, 2080, 2529 |
| BstDEI | CTNAG | 8 cut(s) | 683, 1311, 1370, 1409, 1455, 2220, 2820, 3163 |
| BstDSI | CCRYGG | 2 cut(s) | 264, 2909 |
| BstF5I | GGATG | 9 cut(s) | 835, 1420, 1488, 1880, 1903, 2039, 2146, 2734, 2919 |
| BstFNI | CGCG | 2 cut(s) | 407, 3186 |
| BstHHI | GCGC | 5 cut(s) | 200, 973, 1821, 3033, 3188 |
| BstMAI | GTCTC | 5 cut(s) | 813, 1410, 1984, 3018, 3074 |
| BstMCI | CGRYCG | 1 cut(s) | 222 |
| BstNSI | RCATGY | 3 cut(s) | 587, 1463, 2531 |
| BstSCI | CCNGG | 3 cut(s) | 221, 991, 1363 |
| BstSFI | CTRYAG | 2 cut(s) | 1566, 2127 |
| BstUI | CGCG | 2 cut(s) | 407, 3186 |
| BstV1I | GCAGC | 5 cut(s) | 173, 960, 2323, 2744, 3184 |
| BstV2I | GAAGAC | 3 cut(s) | 1170, 1700, 2508 |
| BstX2I | RGATCY | 5 cut(s) | 310, 1320, 1714, 2131, 2263 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 480, 1238, 2050 |
| BstYI | RGATCY | 5 cut(s) | 310, 1320, 1714, 2131, 2263 |
| BsuI | GTATCC | 1 cut(s) | 1176 |
| BsuRI | GGCC | 8 cut(s) | 148, 251, 1094, 1375, 1563, 1995, 2297, 3154 |
| BtgI | CCRYGG | 2 cut(s) | 264, 2909 |
| BtgZI | GCGATG | 2 cut(s) | 388, 687 |
| BtsCI | GGATG | 9 cut(s) | 835, 1420, 1488, 1880, 1903, 2039, 2146, 2734, 2919 |
| BtsI | GCAGTG | 4 cut(s) | 514, 905, 1470, 2089 |
| BveI | ACCTGC | 1 cut(s) | 3036 |
| Cac8I | GCNNGC | 6 cut(s) | 215, 714, 978, 1461, 2080, 2529 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1408 |
| CciI | TCATGA | 4 cut(s) | 1653, 1834, 2400, 2755 |
| CfoI | GCGC | 5 cut(s) | 200, 973, 1821, 3033, 3188 |
| Cfr13I | GGNCC | 8 cut(s) | 147, 268, 591, 666, 1562, 1994, 2612, 2815 |
| CpoI | CGGWCCG | 1 cut(s) | 666 |
| CseI | GACGC | 3 cut(s) | 396, 1946, 2813 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1851, 1886 |
| CspI | CGGWCCG | 1 cut(s) | 666 |
| DdeI | CTNAG | 8 cut(s) | 683, 1311, 1370, 1409, 1455, 2220, 2820, 3163 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1976 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1976 |
| Eam1104I | CTCTTC | 2 cut(s) | 432, 2074 |
| EarI | CTCTTC | 2 cut(s) | 432, 2074 |
| EciI | GGCGGA | 3 cut(s) | 194, 373, 630 |
| Ecl136II | GAGCTC | 1 cut(s) | 620 |
| Eco130I | CCWWGG | 2 cut(s) | 473, 2909 |
| Eco24I | GRGCYC | 1 cut(s) | 622 |
| Eco31I | GGTCTC | 2 cut(s) | 1984, 3018 |
| Eco47I | GGWCC | 5 cut(s) | 268, 591, 666, 2612, 2815 |
| Eco53kI | GAGCTC | 1 cut(s) | 620 |
| Eco57I | CTGAAG | 3 cut(s) | 194, 2354, 2520 |
| Eco88I | CYCGRG | 1 cut(s) | 452 |
| EcoICRI | GAGCTC | 1 cut(s) | 620 |
| EcoO109I | RGGNCCY | 2 cut(s) | 591, 2815 |
| EcoRI | GAATTC | 1 cut(s) | 2212 |
| EcoT14I | CCWWGG | 2 cut(s) | 473, 2909 |
| EcoT38I | GRGCYC | 1 cut(s) | 622 |
| ErhI | CCWWGG | 2 cut(s) | 473, 2909 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 136, 168, 2930, 2962 |
| FaqI | GGGAC | 3 cut(s) | 454, 604, 2828 |
| FauI | CCCGC | 3 cut(s) | 218, 222, 1211 |
| FauNDI | CATATG | 2 cut(s) | 2425, 3019 |
| FbaI | TGATCA | 2 cut(s) | 808, 1518 |
| FblI | GTMKAC | 1 cut(s) | 2970 |
| FokI | GGATG | 9 cut(s) | 842, 1407, 1495, 1887, 1910, 2026, 2153, 2741, 2926 |
| FriOI | GRGCYC | 1 cut(s) | 622 |
| FspBI | CTAG | 5 cut(s) | 750, 1254, 2354, 2558, 3150 |
| GlaI | GCGC | 5 cut(s) | 199, 972, 1820, 3032, 3187 |
| GsaI | CCCAGC | 3 cut(s) | 324, 1053, 2000 |
| GsuI | CTGGAG | 1 cut(s) | 2308 |
| HaeIII | GGCC | 8 cut(s) | 148, 251, 1094, 1375, 1563, 1995, 2297, 3154 |
| HapII | CCGG | 8 cut(s) | 222, 366, 372, 669, 908, 992, 1365, 1791 |
| HgaI | GACGC | 3 cut(s) | 396, 1946, 2813 |
| HhaI | GCGC | 5 cut(s) | 200, 973, 1821, 3033, 3188 |
| Hin6I | GCGC | 5 cut(s) | 198, 971, 1819, 3031, 3186 |
| HinP1I | GCGC | 5 cut(s) | 198, 971, 1819, 3031, 3186 |
| HincII | GTYRAC | 1 cut(s) | 2637 |
| HindII | GTYRAC | 1 cut(s) | 2637 |
| HpaII | CCGG | 8 cut(s) | 222, 366, 372, 669, 908, 992, 1365, 1791 |
| Hpy166II | GTNNAC | 7 cut(s) | 268, 550, 1066, 1553, 2437, 2637, 2971 |
| Hpy8I | GTNNAC | 7 cut(s) | 268, 550, 1066, 1553, 2437, 2637, 2971 |
| Hpy99I | CGWCG | 7 cut(s) | 141, 242, 422, 741, 1329, 1940, 2706 |
| HpyAV | CCTTC | 9 cut(s) | 138, 628, 875, 1804, 2138, 2277, 2446, 2536, 3169 |
| HpyCH4III | ACNGT | 8 cut(s) | 61, 272, 464, 666, 2034, 2434, 2509, 2905 |
| HpyCH4IV | ACGT | 5 cut(s) | 237, 420, 1077, 1546, 2633 |
| HpyF3I | CTNAG | 8 cut(s) | 683, 1311, 1370, 1409, 1455, 2220, 2820, 3163 |
| HpySE526I | ACGT | 5 cut(s) | 237, 420, 1077, 1546, 2633 |
| HspAI | GCGC | 5 cut(s) | 198, 971, 1819, 3031, 3186 |
| KflI | GGGWCCC | 2 cut(s) | 591, 2815 |
| Kpn2I | TCCGGA | 1 cut(s) | 1790 |
| KpnI | GGTACC | 1 cut(s) | 2904 |
| Ksp22I | TGATCA | 2 cut(s) | 808, 1518 |
| Lsp1109I | GCAGC | 5 cut(s) | 173, 960, 2323, 2744, 3184 |
| LweI | GCATC | 3 cut(s) | 1240, 1806, 2719 |
| MaeI | CTAG | 5 cut(s) | 750, 1254, 2354, 2558, 3150 |
| MaeII | ACGT | 5 cut(s) | 237, 420, 1077, 1546, 2633 |
| MaeIII | GTNAC | 5 cut(s) | 272, 1226, 2327, 2617, 2950 |
| MbiI | CCGCTC | 3 cut(s) | 612, 1218, 2934 |
| MfeI | CAATTG | 2 cut(s) | 707, 1096 |
| MflI | RGATCY | 5 cut(s) | 310, 1320, 1714, 2131, 2263 |
| MhlI | GDGCHC | 1 cut(s) | 622 |
| MlyI | GAGTC | 3 cut(s) | 578, 961, 1823 |
| MmeI | TCCRAC | 5 cut(s) | 807, 902, 1348, 1806, 3097 |
| MroI | TCCGGA | 1 cut(s) | 1790 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1776 |
| MseI | TTAA | 9 cut(s) | 327, 933, 1020, 1211, 1721, 1965, 2153, 2481, 3116 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2987 |
| MspA1I | CMGCKG | 2 cut(s) | 1264, 3197 |
| MspCI | CTTAAG | 1 cut(s) | 1210 |
| MspI | CCGG | 8 cut(s) | 222, 366, 372, 669, 908, 992, 1365, 1791 |
| MspR9I | CCNGG | 3 cut(s) | 223, 993, 1365 |
| MunI | CAATTG | 2 cut(s) | 707, 1096 |
| Mva1269I | GAATGC | 2 cut(s) | 200, 2588 |
| MvnI | CGCG | 2 cut(s) | 407, 3186 |
| NciI | CCSGG | 3 cut(s) | 223, 993, 1365 |
| NcoI | CCATGG | 1 cut(s) | 2909 |
| NdeI | CATATG | 2 cut(s) | 2425, 3019 |
| NmuCI | GTSAC | 3 cut(s) | 2327, 2617, 2950 |
| NspI | RCATGY | 3 cut(s) | 587, 1463, 2531 |
| PaeI | GCATGC | 2 cut(s) | 1463, 2531 |
| PaeR7I | CTCGAG | 1 cut(s) | 452 |
| PagI | TCATGA | 4 cut(s) | 1653, 1834, 2400, 2755 |
| PciI | ACATGT | 1 cut(s) | 583 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 243, 441, 450 |
| PctI | GAATGC | 2 cut(s) | 200, 2588 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1776 |
| PfeI | GAWTC | 8 cut(s) | 380, 677, 785, 800, 1142, 1222, 1288, 1490 |
| Pfl23II | CGTACG | 1 cut(s) | 661 |
| PleI | GAGTC | 3 cut(s) | 577, 960, 1823 |
| PpsI | GAGTC | 3 cut(s) | 577, 960, 1823 |
| PpuMI | RGGWCCY | 2 cut(s) | 591, 2815 |
| PscI | ACATGT | 1 cut(s) | 583 |
| PshBI | ATTAAT | 2 cut(s) | 1965, 3116 |
| PsiI | TTATAA | 2 cut(s) | 1590, 2279 |
| Psp124BI | GAGCTC | 1 cut(s) | 622 |
| Psp1406I | AACGTT | 2 cut(s) | 1077, 2633 |
| Psp5II | RGGWCCY | 2 cut(s) | 591, 2815 |
| PspFI | CCCAGC | 3 cut(s) | 320, 1049, 1996 |
| PspLI | CGTACG | 1 cut(s) | 661 |
| PspPI | GGNCC | 8 cut(s) | 147, 268, 591, 666, 1562, 1994, 2612, 2815 |
| PspPPI | RGGWCCY | 2 cut(s) | 591, 2815 |
| PspXI | VCTCGAGB | 1 cut(s) | 452 |
| PstI | CTGCAG | 1 cut(s) | 1570 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1408 |
| PsuI | RGATCY | 5 cut(s) | 310, 1320, 1714, 2131, 2263 |
| PvuII | CAGCTG | 1 cut(s) | 3197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2987 |
| Rsr2I | CGGWCCG | 1 cut(s) | 666 |
| RsrII | CGGWCCG | 1 cut(s) | 666 |
| SacI | GAGCTC | 1 cut(s) | 622 |
| SaqAI | TTAA | 9 cut(s) | 327, 933, 1020, 1211, 1721, 1965, 2153, 2481, 3116 |
| Sau96I | GGNCC | 8 cut(s) | 147, 268, 591, 666, 1562, 1994, 2612, 2815 |
| SchI | GAGTC | 3 cut(s) | 578, 961, 1823 |
| ScrFI | CCNGG | 3 cut(s) | 223, 993, 1365 |
| SduI | GDGCHC | 1 cut(s) | 622 |
| SfaNI | GCATC | 3 cut(s) | 1240, 1806, 2719 |
| SfcI | CTRYAG | 2 cut(s) | 1566, 2127 |
| Sfr274I | CTCGAG | 1 cut(s) | 452 |
| SinI | GGWCC | 5 cut(s) | 268, 591, 666, 2612, 2815 |
| SlaI | CTCGAG | 1 cut(s) | 452 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2987 |
| SmlI | CTYRAG | 5 cut(s) | 344, 452, 1210, 2361, 2393 |
| SmoI | CTYRAG | 5 cut(s) | 344, 452, 1210, 2361, 2393 |
| SpeI | ACTAGT | 1 cut(s) | 749 |
| SphI | GCATGC | 2 cut(s) | 1463, 2531 |
| SspI | AATATT | 3 cut(s) | 304, 2384, 2581 |
| SspMI | CTAG | 5 cut(s) | 750, 1254, 2354, 2558, 3150 |
| SstI | GAGCTC | 1 cut(s) | 622 |
| StyD4I | CCNGG | 3 cut(s) | 221, 991, 1363 |
| StyI | CCWWGG | 2 cut(s) | 473, 2909 |
| TaaI | ACNGT | 8 cut(s) | 61, 272, 464, 666, 2034, 2434, 2509, 2905 |
| TaiI | ACGT | 5 cut(s) | 240, 423, 1080, 1549, 2636 |
| TaqI | TCGA | 9 cut(s) | 14, 287, 435, 453, 950, 1935, 2180, 2257, 2704 |
| TatI | WGTACW | 3 cut(s) | 8, 2643, 2893 |
| TauI | GCSGC | 6 cut(s) | 246, 389, 603, 615, 641, 2937 |
| TfiI | GAWTC | 8 cut(s) | 380, 677, 785, 800, 1142, 1222, 1288, 1490 |
| Tru1I | TTAA | 9 cut(s) | 327, 933, 1020, 1211, 1721, 1965, 2153, 2481, 3116 |
| Tru9I | TTAA | 9 cut(s) | 327, 933, 1020, 1211, 1721, 1965, 2153, 2481, 3116 |
| TseFI | GTSAC | 3 cut(s) | 2327, 2617, 2950 |
| TseI | GCWGC | 5 cut(s) | 186, 973, 2336, 2732, 3197 |
| Tsp45I | GTSAC | 3 cut(s) | 2327, 2617, 2950 |
| TspGWI | ACGGA | 5 cut(s) | 253, 1131, 1502, 1570, 2636 |
| Vha464I | CTTAAG | 1 cut(s) | 1210 |
| VpaK11BI | GGWCC | 5 cut(s) | 268, 591, 666, 2612, 2815 |
| VspI | ATTAAT | 2 cut(s) | 1965, 3116 |
| XapI | RAATTY | 3 cut(s) | 1378, 1774, 2212 |
| XceI | RCATGY | 3 cut(s) | 587, 1463, 2531 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1102 |
| XhoI | CTCGAG | 1 cut(s) | 452 |
| XmiI | GTMKAC | 1 cut(s) | 2970 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1776 |
| XspI | CTAG | 5 cut(s) | 750, 1254, 2354, 2558, 3150 |