PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g03810 |
| malus_domestica | MD02G1036600.v1.1 MD15G1176700.v1.1 |
| prunus_persica | Prupe.7G238800_v2.0.a1 |
| pyrus_communis | pycom02g03010 pycom15g15820 |
| rosa_chinensis | RchiOBHm_Chr2g0089211 |
| rosa_laevigata | RLG00000016005 |
| rosa_multiflora | Rmu_sc0008322.1_g000024 Rmu_sc0030891.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152140 |
| rosa_rugosa | Rorug01G0488400 Rorug01G0488500 |
| rosa_samantha | Rh2AG044100 Rh2BG042800 Rh2CG044300 Rh2DG043100 |
| rosa_wichuraiana | Rw2G003900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2222 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 182, 320 |
| AatII | GACGTC | 1 cut(s) | 324 |
| AccB1I | GGYRCC | 1 cut(s) | 284 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 381, 1296 |
| AccI | GTMKAC | 2 cut(s) | 174, 306 |
| AccII | CGCG | 2 cut(s) | 303, 1103 |
| AclI | AACGTT | 1 cut(s) | 2397 |
| AclWI | GGATC | 6 cut(s) | 170, 280, 436, 2284, 2627, 2640 |
| AcoI | YGGCCR | 2 cut(s) | 119, 543 |
| AcsI | RAATTY | 5 cut(s) | 694, 757, 1354, 2011, 2440 |
| AcuI | CTGAAG | 1 cut(s) | 1743 |
| AcyI | GRCGYC | 2 cut(s) | 285, 321 |
| AfaI | GTAC | 2 cut(s) | 254, 1610 |
| AflIII | ACRYGT | 2 cut(s) | 751, 1814 |
| AgeI | ACCGGT | 1 cut(s) | 862 |
| AgsI | TTSAA | 6 cut(s) | 100, 529, 694, 742, 1522, 2602 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 332 |
| AjnI | CCWGG | 1 cut(s) | 1429 |
| Alw21I | GWGCWC | 1 cut(s) | 281 |
| Alw26I | GTCTC | 4 cut(s) | 149, 608, 844, 1664 |
| AlwI | GGATC | 6 cut(s) | 170, 280, 436, 2284, 2627, 2640 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 381 |
| Ama87I | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| AoxI | GGCC | 5 cut(s) | 119, 543, 1238, 1426, 2094 |
| ApeKI | GCWGC | 6 cut(s) | 67, 93, 532, 1077, 2156, 2549 |
| ApoI | RAATTY | 5 cut(s) | 694, 757, 1354, 2011, 2440 |
| AsiGI | ACCGGT | 1 cut(s) | 862 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1223, 1617, 2568 |
| AspLEI | GCGC | 3 cut(s) | 107, 287, 1103 |
| AspS9I | GGNCC | 7 cut(s) | 459, 1377, 1427, 1868, 1961, 2053, 2429 |
| AsuC2I | CCSGG | 7 cut(s) | 118, 130, 160, 457, 463, 464, 888 |
| AsuNHI | GCTAGC | 1 cut(s) | 1889 |
| AvaI | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| AvaII | GGWCC | 6 cut(s) | 459, 1377, 1868, 1961, 2053, 2429 |
| BaeGI | GKGCMC | 1 cut(s) | 2243 |
| BalI | TGGCCA | 1 cut(s) | 545 |
| BamHI | GGATCC | 1 cut(s) | 2632 |
| BanI | GGYRCC | 1 cut(s) | 284 |
| BanII | GRGCYC | 1 cut(s) | 281 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 125, 157 |
| BauI | CACGAG | 1 cut(s) | 2573 |
| Bbv12I | GWGCWC | 1 cut(s) | 281 |
| BbvCI | CCTCAGC | 3 cut(s) | 512, 1872, 2637 |
| BbvI | GCAGC | 6 cut(s) | 79, 105, 544, 1089, 2143, 2561 |
| BceAI | ACGGC | 3 cut(s) | 109, 118, 514 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2138, 2172, 2631, 2665 |
| BciT130I | CCWGG | 1 cut(s) | 1431 |
| BclI | TGATCA | 3 cut(s) | 769, 829, 1507 |
| BcnI | CCSGG | 7 cut(s) | 118, 130, 160, 457, 463, 464, 888 |
| BcoDI | GTCTC | 4 cut(s) | 149, 608, 844, 1664 |
| BfaI | CTAG | 9 cut(s) | 618, 726, 1113, 1359, 1497, 1890, 2073, 2174, 2618 |
| BfmI | CTRYAG | 2 cut(s) | 91, 2189 |
| BfoI | RGCGCY | 1 cut(s) | 288 |
| BglII | AGATCT | 1 cut(s) | 1930 |
| Bme1390I | CCNGG | 8 cut(s) | 118, 130, 160, 457, 463, 464, 888, 1431 |
| Bme18I | GGWCC | 6 cut(s) | 459, 1377, 1868, 1961, 2053, 2429 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 332 |
| BmeT110I | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| BmgT120I | GGNCC | 7 cut(s) | 459, 1377, 1427, 1868, 1961, 2053, 2429 |
| BmrFI | CCNGG | 8 cut(s) | 118, 130, 160, 457, 463, 464, 888, 1431 |
| BmsI | GCATC | 3 cut(s) | 1315, 2000, 2536 |
| BmtI | GCTAGC | 1 cut(s) | 1893 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2620, 2652 |
| Bpu10I | CCTNAGC | 4 cut(s) | 512, 1474, 1872, 2637 |
| BpuEI | CTTGAG | 5 cut(s) | 65, 1402, 1911, 1950, 2234 |
| BpuMI | CCSGG | 7 cut(s) | 118, 130, 160, 457, 463, 464, 888 |
| Bsa29I | ATCGAT | 1 cut(s) | 2338 |
| BsaHI | GRCGYC | 2 cut(s) | 285, 321 |
| BsaI | GGTCTC | 1 cut(s) | 149 |
| BsaJI | CCNNGG | 9 cut(s) | 116, 462, 887, 965, 1228, 1429, 1461, 2101, 2260 |
| BsaWI | WCCGGW | 4 cut(s) | 177, 201, 862, 875 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 221, 251, 775, 805 |
| Bse118I | RCCGGY | 3 cut(s) | 862, 1055, 1310 |
| Bse1I | ACTGG | 3 cut(s) | 975, 2432, 2645 |
| Bse3DI | GCAATG | 5 cut(s) | 231, 412, 852, 1251, 2547 |
| BseBI | CCWGG | 1 cut(s) | 1431 |
| BseCI | ATCGAT | 1 cut(s) | 2338 |
| BseDI | CCNNGG | 9 cut(s) | 116, 462, 887, 965, 1228, 1429, 1461, 2101, 2260 |
| BseGI | GGATG | 9 cut(s) | 922, 1000, 1204, 1285, 1330, 1353, 1945, 2389, 2551 |
| BseMI | GCAATG | 5 cut(s) | 231, 412, 852, 1251, 2547 |
| BseMII | CTCAG | 7 cut(s) | 503, 1158, 1311, 1586, 1886, 1948, 2651 |
| BseNI | ACTGG | 3 cut(s) | 975, 2432, 2645 |
| BseRI | GAGGAG | 1 cut(s) | 2063 |
| BseSI | GKGCMC | 1 cut(s) | 2243 |
| BseX3I | CGGCCG | 1 cut(s) | 119 |
| BseXI | GCAGC | 6 cut(s) | 79, 105, 544, 1089, 2143, 2561 |
| BseYI | CCCAGC | 1 cut(s) | 63 |
| Bsh1236I | CGCG | 2 cut(s) | 303, 1103 |
| Bsh1285I | CGRYCG | 4 cut(s) | 122, 178, 206, 1699 |
| BshFI | GGCC | 5 cut(s) | 121, 545, 1240, 1428, 2096 |
| BshNI | GGYRCC | 1 cut(s) | 284 |
| BshTI | ACCGGT | 1 cut(s) | 862 |
| BshVI | ATCGAT | 1 cut(s) | 2338 |
| BsiEI | CGRYCG | 4 cut(s) | 122, 178, 206, 1699 |
| BsiHKAI | GWGCWC | 1 cut(s) | 281 |
| BsiHKCI | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| BsmAI | GTCTC | 4 cut(s) | 149, 608, 844, 1664 |
| BsmI | GAATGC | 2 cut(s) | 107, 2405 |
| BsnI | GGCC | 5 cut(s) | 121, 545, 1240, 1428, 2096 |
| Bso31I | GGTCTC | 1 cut(s) | 149 |
| BsoBI | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| Bsp1286I | GDGCHC | 2 cut(s) | 281, 2243 |
| Bsp19I | CCATGG | 2 cut(s) | 2101, 2260 |
| BspANI | GGCC | 5 cut(s) | 121, 545, 1240, 1428, 2096 |
| BspCNI | CTCAG | 7 cut(s) | 504, 1159, 1312, 1585, 1885, 1947, 2650 |
| BspDI | ATCGAT | 1 cut(s) | 2338 |
| BspFNI | CGCG | 2 cut(s) | 303, 1103 |
| BspMAI | CTGCAG | 1 cut(s) | 95 |
| BspOI | GCTAGC | 1 cut(s) | 1893 |
| BspPI | GGATC | 6 cut(s) | 170, 280, 436, 2284, 2627, 2640 |
| BspQI | GCTCTTC | 1 cut(s) | 2573 |
| BspT107I | GGYRCC | 1 cut(s) | 284 |
| BspTNI | GGTCTC | 1 cut(s) | 149 |
| BsrDI | GCAATG | 5 cut(s) | 231, 412, 852, 1251, 2547 |
| BsrFI | RCCGGY | 3 cut(s) | 862, 1055, 1310 |
| BsrI | ACTGG | 3 cut(s) | 975, 2432, 2645 |
| BssAI | RCCGGY | 3 cut(s) | 862, 1055, 1310 |
| BssECI | CCNNGG | 9 cut(s) | 116, 462, 887, 965, 1228, 1429, 1461, 2101, 2260 |
| BssNI | GRCGYC | 2 cut(s) | 285, 321 |
| BssSI | CACGAG | 1 cut(s) | 2573 |
| BssT1I | CCWWGG | 5 cut(s) | 965, 1228, 1461, 2101, 2260 |
| Bst2BI | CACGAG | 1 cut(s) | 2573 |
| Bst2UI | CCWGG | 1 cut(s) | 1431 |
| Bst6I | CTCTTC | 4 cut(s) | 1885, 2071, 2519, 2573 |
| BstACI | GRCGYC | 2 cut(s) | 285, 321 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 538, 2546 |
| BstC8I | GCNNGC | 4 cut(s) | 543, 1643, 1891, 2346 |
| BstDSI | CCRYGG | 2 cut(s) | 2101, 2260 |
| BstF5I | GGATG | 9 cut(s) | 922, 1000, 1204, 1285, 1330, 1353, 1945, 2389, 2551 |
| BstFNI | CGCG | 2 cut(s) | 303, 1103 |
| BstH2I | RGCGCY | 1 cut(s) | 288 |
| BstHHI | GCGC | 3 cut(s) | 107, 287, 1103 |
| BstMAI | GTCTC | 4 cut(s) | 149, 608, 844, 1664 |
| BstMCI | CGRYCG | 4 cut(s) | 122, 178, 206, 1699 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 76, 102, 147, 538, 547, 2546 |
| BstNI | CCWGG | 1 cut(s) | 1431 |
| BstNSI | RCATGY | 5 cut(s) | 755, 1677, 1792, 1818, 2045 |
| BstSCI | CCNGG | 8 cut(s) | 116, 128, 158, 455, 461, 462, 886, 1429 |
| BstSFI | CTRYAG | 2 cut(s) | 91, 2189 |
| BstSLI | GKGCMC | 1 cut(s) | 2243 |
| BstUI | CGCG | 2 cut(s) | 303, 1103 |
| BstV1I | GCAGC | 6 cut(s) | 79, 105, 544, 1089, 2143, 2561 |
| BstX2I | RGATCY | 3 cut(s) | 1930, 2276, 2632 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1097, 1861, 2152 |
| BstYI | RGATCY | 3 cut(s) | 1930, 2276, 2632 |
| BstZI | CGGCCG | 1 cut(s) | 119 |
| Bsu15I | ATCGAT | 1 cut(s) | 2338 |
| BsuRI | GGCC | 5 cut(s) | 121, 545, 1240, 1428, 2096 |
| BsuTUI | ATCGAT | 1 cut(s) | 2338 |
| BtgI | CCRYGG | 2 cut(s) | 2101, 2260 |
| BtgZI | GCGATG | 1 cut(s) | 516 |
| BtsCI | GGATG | 9 cut(s) | 922, 1000, 1204, 1285, 1330, 1353, 1945, 2389, 2551 |
| BtsI | GCAGTG | 1 cut(s) | 2041 |
| BtsIMutI | CAGTG | 5 cut(s) | 456, 726, 1847, 2041, 2439 |
| Cac8I | GCNNGC | 4 cut(s) | 543, 1643, 1891, 2346 |
| CaiI | CAGNNNCTG | 1 cut(s) | 381 |
| CfoI | GCGC | 3 cut(s) | 107, 287, 1103 |
| Cfr10I | RCCGGY | 3 cut(s) | 862, 1055, 1310 |
| Cfr13I | GGNCC | 7 cut(s) | 459, 1377, 1427, 1868, 1961, 2053, 2429 |
| Cfr9I | CCCGGG | 1 cut(s) | 462 |
| ClaI | ATCGAT | 1 cut(s) | 2338 |
| CseI | GACGC | 2 cut(s) | 292, 336 |
| Csp6I | GTAC | 2 cut(s) | 253, 1609 |
| CspAI | ACCGGT | 1 cut(s) | 862 |
| CviQI | GTAC | 2 cut(s) | 253, 1609 |
| DinI | GGCGCC | 1 cut(s) | 286 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 182, 320 |
| DriI | GACNNNNNGTC | 1 cut(s) | 332 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 182, 320 |
| EaeI | YGGCCR | 2 cut(s) | 119, 543 |
| EagI | CGGCCG | 1 cut(s) | 119 |
| Eam1104I | CTCTTC | 4 cut(s) | 1885, 2071, 2519, 2573 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 332 |
| EarI | CTCTTC | 4 cut(s) | 1885, 2071, 2519, 2573 |
| EciI | GGCGGA | 1 cut(s) | 361 |
| Ecl136II | GAGCTC | 1 cut(s) | 279 |
| EclXI | CGGCCG | 1 cut(s) | 119 |
| Eco130I | CCWWGG | 5 cut(s) | 965, 1228, 1461, 2101, 2260 |
| Eco24I | GRGCYC | 1 cut(s) | 281 |
| Eco31I | GGTCTC | 1 cut(s) | 149 |
| Eco47I | GGWCC | 6 cut(s) | 459, 1377, 1868, 1961, 2053, 2429 |
| Eco52I | CGGCCG | 1 cut(s) | 119 |
| Eco53kI | GAGCTC | 1 cut(s) | 279 |
| Eco57I | CTGAAG | 1 cut(s) | 1743 |
| Eco88I | CYCGRG | 3 cut(s) | 353, 462, 2181 |
| EcoICRI | GAGCTC | 1 cut(s) | 279 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1377, 1868, 1961 |
| EcoRI | GAATTC | 3 cut(s) | 694, 1354, 2011 |
| EcoRII | CCWGG | 1 cut(s) | 1429 |
| EcoT14I | CCWWGG | 5 cut(s) | 965, 1228, 1461, 2101, 2260 |
| EcoT22I | ATGCAT | 1 cut(s) | 1330 |
| EcoT38I | GRGCYC | 1 cut(s) | 281 |
| EgeI | GGCGCC | 1 cut(s) | 286 |
| EheI | GGCGCC | 1 cut(s) | 286 |
| ErhI | CCWWGG | 5 cut(s) | 965, 1228, 1461, 2101, 2260 |
| FauNDI | CATATG | 3 cut(s) | 1245, 1446, 2245 |
| FbaI | TGATCA | 3 cut(s) | 769, 829, 1507 |
| FblI | GTMKAC | 2 cut(s) | 174, 306 |
| FokI | GGATG | 9 cut(s) | 929, 1007, 1211, 1272, 1337, 1360, 1952, 2376, 2558 |
| FriOI | GRGCYC | 1 cut(s) | 281 |
| FspBI | CTAG | 9 cut(s) | 618, 726, 1113, 1359, 1497, 1890, 2073, 2174, 2618 |
| GlaI | GCGC | 3 cut(s) | 106, 286, 1102 |
| GsaI | CCCAGC | 1 cut(s) | 67 |
| HaeII | RGCGCY | 1 cut(s) | 288 |
| HaeIII | GGCC | 5 cut(s) | 121, 545, 1240, 1428, 2096 |
| HgaI | GACGC | 2 cut(s) | 292, 336 |
| HhaI | GCGC | 3 cut(s) | 107, 287, 1103 |
| Hin1I | GRCGYC | 2 cut(s) | 285, 321 |
| Hin6I | GCGC | 3 cut(s) | 105, 285, 1101 |
| HinP1I | GCGC | 3 cut(s) | 105, 285, 1101 |
| HincII | GTYRAC | 3 cut(s) | 175, 307, 2381 |
| HindII | GTYRAC | 3 cut(s) | 175, 307, 2381 |
| HindIII | AAGCTT | 1 cut(s) | 2080 |
| Hpy166II | GTNNAC | 6 cut(s) | 175, 307, 946, 1693, 2257, 2381 |
| Hpy8I | GTNNAC | 6 cut(s) | 175, 307, 946, 1693, 2257, 2381 |
| Hpy99I | CGWCG | 9 cut(s) | 36, 176, 188, 308, 317, 320, 323, 330, 2452 |
| HpyCH4IV | ACGT | 5 cut(s) | 183, 321, 705, 942, 2397 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 76, 102, 147, 538, 547, 2546 |
| HpySE526I | ACGT | 5 cut(s) | 183, 321, 705, 942, 2397 |
| Hsp92I | GRCGYC | 2 cut(s) | 285, 321 |
| HspAI | GCGC | 3 cut(s) | 105, 285, 1101 |
| KasI | GGCGCC | 1 cut(s) | 284 |
| Ksp22I | TGATCA | 3 cut(s) | 769, 829, 1507 |
| LguI | GCTCTTC | 1 cut(s) | 2573 |
| LmnI | GCTCC | 6 cut(s) | 141, 204, 264, 284, 971, 2480 |
| Lsp1109I | GCAGC | 6 cut(s) | 79, 105, 544, 1089, 2143, 2561 |
| LweI | GCATC | 3 cut(s) | 1315, 2000, 2536 |
| MaeI | CTAG | 9 cut(s) | 618, 726, 1113, 1359, 1497, 1890, 2073, 2174, 2618 |
| MaeII | ACGT | 5 cut(s) | 183, 321, 705, 942, 2397 |
| MfeI | CAATTG | 1 cut(s) | 536 |
| MflI | RGATCY | 3 cut(s) | 1930, 2276, 2632 |
| MhlI | GDGCHC | 2 cut(s) | 281, 2243 |
| MlsI | TGGCCA | 1 cut(s) | 545 |
| MluNI | TGGCCA | 1 cut(s) | 545 |
| Mly113I | GGCGCC | 1 cut(s) | 285 |
| MlyI | GAGTC | 4 cut(s) | 302, 372, 432, 2057 |
| MmeI | TCCRAC | 6 cut(s) | 336, 349, 406, 1417, 2080, 2169 |
| Mox20I | TGGCCA | 1 cut(s) | 545 |
| Mph1103I | ATGCAT | 1 cut(s) | 1330 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1223, 1617, 2568 |
| MscI | TGGCCA | 1 cut(s) | 545 |
| MseI | TTAA | 6 cut(s) | 489, 909, 1416, 2078, 2115, 2480 |
| MslI | CAYNNNNRTG | 3 cut(s) | 501, 1014, 1449 |
| Msp20I | TGGCCA | 1 cut(s) | 545 |
| MspA1I | CMGCKG | 3 cut(s) | 1030, 1123, 1166 |
| MspR9I | CCNGG | 8 cut(s) | 118, 130, 160, 457, 463, 464, 888, 1431 |
| MunI | CAATTG | 1 cut(s) | 536 |
| Mva1269I | GAATGC | 2 cut(s) | 107, 2405 |
| MvaI | CCWGG | 1 cut(s) | 1431 |
| MvnI | CGCG | 2 cut(s) | 303, 1103 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 76, 102, 147, 538, 547, 2546 |
| NarI | GGCGCC | 1 cut(s) | 285 |
| NciI | CCSGG | 7 cut(s) | 118, 130, 160, 457, 463, 464, 888 |
| NcoI | CCATGG | 2 cut(s) | 2101, 2260 |
| NdeI | CATATG | 3 cut(s) | 1245, 1446, 2245 |
| NheI | GCTAGC | 1 cut(s) | 1889 |
| NmeAIII | GCCGAG | 1 cut(s) | 821 |
| NmuCI | GTSAC | 6 cut(s) | 451, 1627, 1900, 2419, 2434, 2452 |
| NsiI | ATGCAT | 1 cut(s) | 1330 |
| NspI | RCATGY | 5 cut(s) | 755, 1677, 1792, 1818, 2045 |
| PaeR7I | CTCGAG | 2 cut(s) | 353, 2181 |
| PciI | ACATGT | 2 cut(s) | 751, 1814 |
| PciSI | GCTCTTC | 1 cut(s) | 2573 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 180, 303, 312, 342, 351 |
| PctI | GAATGC | 2 cut(s) | 107, 2405 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1223, 1617, 2568 |
| PfeI | GAWTC | 6 cut(s) | 506, 1022, 1042, 1456, 1796, 1976 |
| PflFI | GACNNNGTC | 1 cut(s) | 320 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 381, 1296 |
| PfoI | TCCNGGA | 1 cut(s) | 128 |
| PinAI | ACCGGT | 1 cut(s) | 862 |
| PleI | GAGTC | 4 cut(s) | 302, 372, 431, 2057 |
| PluTI | GGCGCC | 1 cut(s) | 288 |
| PpsI | GAGTC | 4 cut(s) | 302, 372, 431, 2057 |
| PpuMI | RGGWCCY | 3 cut(s) | 1377, 1868, 1961 |
| PscI | ACATGT | 2 cut(s) | 751, 1814 |
| PsiI | TTATAA | 1 cut(s) | 2222 |
| Psp124BI | GAGCTC | 1 cut(s) | 281 |
| Psp1406I | AACGTT | 1 cut(s) | 2397 |
| Psp5II | RGGWCCY | 3 cut(s) | 1377, 1868, 1961 |
| Psp6I | CCWGG | 1 cut(s) | 1429 |
| PspFI | CCCAGC | 1 cut(s) | 63 |
| PspGI | CCWGG | 1 cut(s) | 1429 |
| PspPI | GGNCC | 7 cut(s) | 459, 1377, 1427, 1868, 1961, 2053, 2429 |
| PspPPI | RGGWCCY | 3 cut(s) | 1377, 1868, 1961 |
| PstI | CTGCAG | 1 cut(s) | 95 |
| PstNI | CAGNNNCTG | 1 cut(s) | 381 |
| PsuI | RGATCY | 3 cut(s) | 1930, 2276, 2632 |
| PsyI | GACNNNGTC | 1 cut(s) | 320 |
| PvuII | CAGCTG | 1 cut(s) | 1166 |
| RsaI | GTAC | 2 cut(s) | 254, 1610 |
| RsaNI | GTAC | 2 cut(s) | 253, 1609 |
| RseI | CAYNNNNRTG | 3 cut(s) | 501, 1014, 1449 |
| SacI | GAGCTC | 1 cut(s) | 281 |
| SalI | GTCGAC | 2 cut(s) | 173, 305 |
| SapI | GCTCTTC | 1 cut(s) | 2573 |
| SaqAI | TTAA | 6 cut(s) | 489, 909, 1416, 2078, 2115, 2480 |
| Sau96I | GGNCC | 7 cut(s) | 459, 1377, 1427, 1868, 1961, 2053, 2429 |
| SchI | GAGTC | 4 cut(s) | 302, 372, 432, 2057 |
| ScrFI | CCNGG | 8 cut(s) | 118, 130, 160, 457, 463, 464, 888, 1431 |
| SduI | GDGCHC | 2 cut(s) | 281, 2243 |
| SfaNI | GCATC | 3 cut(s) | 1315, 2000, 2536 |
| SfcI | CTRYAG | 2 cut(s) | 91, 2189 |
| SfoI | GGCGCC | 1 cut(s) | 286 |
| Sfr274I | CTCGAG | 2 cut(s) | 353, 2181 |
| SinI | GGWCC | 6 cut(s) | 459, 1377, 1868, 1961, 2053, 2429 |
| SlaI | CTCGAG | 2 cut(s) | 353, 2181 |
| SmaI | CCCGGG | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 501, 1014, 1449 |
| SmlI | CTYRAG | 7 cut(s) | 80, 353, 1381, 1926, 1965, 2181, 2213 |
| SmoI | CTYRAG | 7 cut(s) | 80, 353, 1381, 1926, 1965, 2181, 2213 |
| SspDI | GGCGCC | 1 cut(s) | 284 |
| SspI | AATATT | 2 cut(s) | 1469, 1828 |
| SspMI | CTAG | 9 cut(s) | 618, 726, 1113, 1359, 1497, 1890, 2073, 2174, 2618 |
| SstI | GAGCTC | 1 cut(s) | 281 |
| StyD4I | CCNGG | 8 cut(s) | 116, 128, 158, 455, 461, 462, 886, 1429 |
| StyI | CCWWGG | 5 cut(s) | 965, 1228, 1461, 2101, 2260 |
| TaiI | ACGT | 5 cut(s) | 186, 324, 708, 945, 2400 |
| TauI | GCSGC | 4 cut(s) | 124, 153, 290, 485 |
| TfiI | GAWTC | 6 cut(s) | 506, 1022, 1042, 1456, 1796, 1976 |
| Tru1I | TTAA | 6 cut(s) | 489, 909, 1416, 2078, 2115, 2480 |
| Tru9I | TTAA | 6 cut(s) | 489, 909, 1416, 2078, 2115, 2480 |
| TscAI | CASTG | 5 cut(s) | 456, 726, 1854, 2041, 2439 |
| TseFI | GTSAC | 6 cut(s) | 451, 1627, 1900, 2419, 2434, 2452 |
| TseI | GCWGC | 6 cut(s) | 67, 93, 532, 1077, 2156, 2549 |
| Tsp45I | GTSAC | 6 cut(s) | 451, 1627, 1900, 2419, 2434, 2452 |
| TspGWI | ACGGA | 3 cut(s) | 160, 435, 1035 |
| TspMI | CCCGGG | 1 cut(s) | 462 |
| TspRI | CASTG | 5 cut(s) | 456, 726, 1854, 2041, 2439 |
| Tth111I | GACNNNGTC | 1 cut(s) | 320 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 381, 1296 |
| VpaK11BI | GGWCC | 6 cut(s) | 459, 1377, 1868, 1961, 2053, 2429 |
| XapI | RAATTY | 5 cut(s) | 694, 757, 1354, 2011, 2440 |
| XceI | RCATGY | 5 cut(s) | 755, 1677, 1792, 1818, 2045 |
| XhoI | CTCGAG | 2 cut(s) | 353, 2181 |
| XmaI | CCCGGG | 1 cut(s) | 462 |
| XmiI | GTMKAC | 2 cut(s) | 174, 306 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1223, 1617, 2568 |
| XspI | CTAG | 9 cut(s) | 618, 726, 1113, 1359, 1497, 1890, 2073, 2174, 2618 |
| ZraI | GACGTC | 1 cut(s) | 322 |
| Zsp2I | ATGCAT | 1 cut(s) | 1330 |