pycom15g18880

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012501
Physical Location & Seq
Forward (+)
13394457 .. 13396735
2279 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1932 bp
ATGAATGCATGTAACACACCGATTTTTATTCAAAAGAACGTTCTATCATCTATAAAATTTAATAACAATGGAAGATATTTAGTGCAAGTACCGGGAGAACCCATCAAAACCGCCACCCCCCACCTACTTGTCCCAACTCACCATCATCACCACCACCACCACCCCCACCCCCCCTCCTCCATGCCTCGCCGCCATGGCTCACCGTCTCCTCTTTTAAGTCCACCGTTGCTCATCATCCTCTTCCCCATCATCATCTCACTCATCCTCTTCTATACCATCCCTCCATTCCTATCTCTCACGTCTCAACTCCTCCGCCCCACCATTTCCGCCAAGAAAAGTTGGGACTCCCTCAATGTGTTTCTCGTCATTTTCGCAATCCTATGCGGCGTTTTCGCCAATCGAAACGAAGACGCATCACCTACCCAGGAAGATCGCATTCCCGACCATAATATTCCACACCCTTTGGACAACGTAACTACAAACAGCGCGAACATATCGGAATCGGAAGCAGCTGGGTCTTTACTTCCGCAGCAATGGTTTGGATATTCAGAGAGGAGGACCCCGGAAATCGGTGATGGCCGGTTGAGGAGGAGCAGCAACTCCTACCCGGATCTGAGGCAACTCGGGCAAGACTCAGTGTGGGAAACTCCGGATCACAACAAGCCGCAGTTCCGCTTCTTCGACGACTTCGAAATCGGCAATTACAATCGTGCGCCGTCAACTTCACACCAACGCCGATCCGAGGGGTACTCAGATGTAATTAAGGAGATTCCGGTGGATACTTTCGTACTTCACTCTTCTCATCCCCCGCCGCAAAAGCCGCCAACACCGACACCTCCACCGCCGCCTCCACCACGTCAACAAAAAACGAGAAGGACGTATCAGACCTTTCGACGTAAACATCCAAAAACGGAGAAAGTAGTGAATAATCATATTACTGAAGAGGGTGAAGAAATTGAGAACGTTCGAACGTCACCACCGACGCCTCCACCTCCTCCGCCGCCAAGGCCTGCTGCCCCGCCATCGCCAATTCGGATTCGGTCGGAGCCGAAGCGCCGGAAGAGTAATGTGAAGAAGGAGATAGCGATGGTTTGGGCTTCGGTTCTGTCTAATCAGAGAAAGGGGAAGAAGAAGCACAAGGTCACCGGTACCAGAAACATCTACGAAACTGTTGCTTCTCTGCCTGAAGACCAACAACAAGGAGGAGAAGGAGAATACTTTTTCACAAGACCGCGGCCGTCGCAACCTCCTCCACCGCCACCCCCACCGCCGCCACATTCTGTGTTTCATAATCTGTTCAAAAAGGGAATGAGCAAAACTAAGAAAGTTCACTCCATCTCGACACCTCCAACTCCACCACCACCACCACAGCCGGCATTGCGGAAACAAAAGAGTTGGAACACTAGTTTTCCGCTGGCGCCACCAACTCCGCCTCAACAACCACCGCCGGCTACTTCCCGACGGCGATCTTCCACCTCCAGTGGCCGTCCGCCGTTGCCGACTAAGTCGAGCAGTTATCTGTACGAGGAAAATGTAAACAGCGGCAGCCAGAGTCCGTTAATTCCAGTGGCGCCGCCACCTCCTCCGCCGTTCAAAATGCCGGAGCTGAAGTTTTTTGTGCGCGGGGATTTTGTTAAGATACGGAGTGCGGAGAGCTCACGCTGTGGATCTCCTGAATTGGAGGACGTTGATGACGTTGATGCGTCGCCACGTAAGGAAGAAGACTTGAAGTCAAAGTCAGAAGTACAGAGTAAAGTCAACGTGATGGACACTGGAGATGGTGGTGGTGGTGGCGGCAGCGGCGGCAGATCCTCCGTGTTCTGCCCTAGCCCAGATGTTAATACGAAAGCTGATAACTTCATTGCTAGGCTGAGAGATGAGTGGAAGCTTGAGAAGATGAACTCAATGAGGCAGAAAAAGAAGATGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

644

Amino Acids

71.86

Weight (kDa)

9.86

Isoelectric Point (pI)

79.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 611 - 642 2.3e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1148
AccB1I GGYRCC 3 cut(s) 1148, 1417, 1570
AccII CGCG 3 cut(s) 488, 1234, 1623
AccIII TCCGGA 1 cut(s) 649
AclI AACGTT 2 cut(s) 39, 963
AclWI GGATC 5 cut(s) 618, 660, 732, 1675, 1803
AcoI YGGCCR 3 cut(s) 577, 1235, 1483
AcsI RAATTY 1 cut(s) 56
AcuI CTGAAG 3 cut(s) 960, 1206, 1628
AcyI GRCGYC 3 cut(s) 983, 1418, 1571
AdeI CACNNNGTG 1 cut(s) 1664
AfaI GTAC 6 cut(s) 90, 749, 789, 1150, 1523, 1746
AfiI CCNNNNNNNGG 2 cut(s) 569, 742
AgeI ACCGGT 1 cut(s) 1145
AgsI TTSAA 4 cut(s) 32, 1300, 1594, 1729
AhdI GACNNNNNGTC 1 cut(s) 1729
AhlI ACTAGT 1 cut(s) 1403
AjiI CACGTC 2 cut(s) 300, 857
AjnI CCWGG 1 cut(s) 423
AluBI AGCT 5 cut(s) 512, 1606, 1656, 1850, 1888
AluI AGCT 5 cut(s) 512, 1606, 1656, 1850, 1888
Alw21I GWGCWC 1 cut(s) 1658
Alw26I GTCTC 2 cut(s) 210, 306
AlwI GGATC 5 cut(s) 618, 660, 732, 1675, 1803
Ama87I CYCGRG 1 cut(s) 623
Aor13HI TCCGGA 1 cut(s) 649
AoxI GGCC 4 cut(s) 577, 1007, 1235, 1483
ApeKI GCWGC 6 cut(s) 509, 529, 594, 1013, 1545, 1797
ApoI RAATTY 1 cut(s) 56
AsiGI ACCGGT 1 cut(s) 1145
Asp718I GGTACC 1 cut(s) 1148
AspLEI GCGC 6 cut(s) 488, 715, 1056, 1420, 1573, 1623
AspS9I GGNCC 1 cut(s) 558
AsuC2I CCSGG 3 cut(s) 93, 563, 608
AsuHPI GGTGA 8 cut(s) 131, 140, 192, 408, 584, 959, 966, 1135
AsuII TTCGAA 2 cut(s) 690, 967
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 1 cut(s) 558
BaeI ACNNNNGTAYC 2 cut(s) 771, 804
BanI GGYRCC 3 cut(s) 1148, 1417, 1570
BanII GRGCYC 1 cut(s) 1658
BbsI GAAGAC 3 cut(s) 414, 1194, 1728
Bbv12I GWGCWC 1 cut(s) 1658
BbvI GCAGC 6 cut(s) 521, 541, 606, 1000, 1557, 1809
BceAI ACGGC 6 cut(s) 700, 1222, 1470, 1477, 1478, 1573
BcgI CGANNNNNNTGC 2 cut(s) 1154, 1188
BciT130I CCWGG 1 cut(s) 425
BciVI GTATCC 1 cut(s) 772
BcnI CCSGG 3 cut(s) 93, 563, 608
BcoDI GTCTC 2 cut(s) 210, 306
BcuI ACTAGT 1 cut(s) 1403
BfaI CTAG 3 cut(s) 1404, 1827, 1866
BfoI RGCGCY 3 cut(s) 1057, 1421, 1574
BfuI GTATCC 1 cut(s) 772
BglI GCCNNNNNGGC 2 cut(s) 195, 1006
Bme1390I CCNGG 4 cut(s) 93, 425, 563, 608
Bme18I GGWCC 1 cut(s) 558
BmeRI GACNNNNNGTC 1 cut(s) 1729
BmeT110I CYCGRG 1 cut(s) 623
BmgBI CACGTC 2 cut(s) 300, 857
BmgT120I GGNCC 1 cut(s) 558
BmiI GGNNCC 5 cut(s) 560, 1047, 1150, 1419, 1572
BmrFI CCNGG 4 cut(s) 93, 425, 563, 608
BmsI GCATC 3 cut(s) 422, 1690, 1914
BpiI GAAGAC 3 cut(s) 414, 1194, 1728
BplI GAGNNNNNCTC 2 cut(s) 734, 766
BpmI CTGGAG 2 cut(s) 1462, 1794
Bpu14I TTCGAA 2 cut(s) 690, 967
BpuEI CTTGAG 1 cut(s) 1910
BpuMI CCSGG 3 cut(s) 93, 563, 608
BsaAI YACGTR 1 cut(s) 1712
BsaHI GRCGYC 3 cut(s) 983, 1418, 1571
BsaJI CCNNGG 6 cut(s) 193, 423, 561, 741, 1004, 1232
BsaWI WCCGGW 3 cut(s) 649, 772, 1145
BsaXI ACNNNNNCTCC 6 cut(s) 158, 188, 265, 295, 1595, 1625
Bsc4I CCNNNNNNNGG 2 cut(s) 569, 742
Bse118I RCCGGY 4 cut(s) 579, 1145, 1372, 1447
Bse1I ACTGG 3 cut(s) 1479, 1565, 1777
Bse3DI GCAATG 3 cut(s) 539, 1376, 1860
BseAI TCCGGA 1 cut(s) 649
BseBI CCWGG 1 cut(s) 425
BseDI CCNNGG 6 cut(s) 193, 423, 561, 741, 1004, 1232
BseGI GGATG 5 cut(s) 234, 261, 276, 802, 901
BseLI CCNNNNNNNGG 2 cut(s) 569, 742
BseMI GCAATG 3 cut(s) 539, 1376, 1860
BseMII CTCAG 4 cut(s) 605, 648, 765, 1862
BseNI ACTGG 3 cut(s) 1479, 1565, 1777
BseX3I CGGCCG 1 cut(s) 1235
BseXI GCAGC 6 cut(s) 521, 541, 606, 1000, 1557, 1809
BseYI CCCAGC 1 cut(s) 512
Bsh1236I CGCG 3 cut(s) 488, 1234, 1623
Bsh1285I CGRYCG 2 cut(s) 1043, 1238
BshFI GGCC 4 cut(s) 579, 1009, 1237, 1485
BshNI GGYRCC 3 cut(s) 1148, 1417, 1570
BshTI ACCGGT 1 cut(s) 1145
BsiEI CGRYCG 2 cut(s) 1043, 1238
BsiHKAI GWGCWC 1 cut(s) 1658
BsiHKCI CYCGRG 1 cut(s) 623
BslFI GGGAC 2 cut(s) 116, 356
BslI CCNNNNNNNGG 2 cut(s) 569, 742
BsmAI GTCTC 2 cut(s) 210, 306
BsmBI CGTCTC 2 cut(s) 210, 306
BsmFI GGGAC 2 cut(s) 116, 356
BsmI GAATGC 2 cut(s) 10, 435
BsnI GGCC 4 cut(s) 579, 1009, 1237, 1485
BsoBI CYCGRG 1 cut(s) 623
Bsp119I TTCGAA 2 cut(s) 690, 967
Bsp1286I GDGCHC 1 cut(s) 1658
Bsp13I TCCGGA 1 cut(s) 649
Bsp143I GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
Bsp19I CCATGG 1 cut(s) 193
BspANI GGCC 4 cut(s) 579, 1009, 1237, 1485
BspCNI CTCAG 4 cut(s) 606, 647, 764, 1863
BspEI TCCGGA 1 cut(s) 649
BspFNI CGCG 3 cut(s) 488, 1234, 1623
BspLI GGNNCC 5 cut(s) 560, 1047, 1150, 1419, 1572
BspPI GGATC 5 cut(s) 618, 660, 732, 1675, 1803
BspT104I TTCGAA 2 cut(s) 690, 967
BspT107I GGYRCC 3 cut(s) 1148, 1417, 1570
BsrDI GCAATG 3 cut(s) 539, 1376, 1860
BsrFI RCCGGY 4 cut(s) 579, 1145, 1372, 1447
BsrI ACTGG 3 cut(s) 1479, 1565, 1777
BssAI RCCGGY 4 cut(s) 579, 1145, 1372, 1447
BssECI CCNNGG 6 cut(s) 193, 423, 561, 741, 1004, 1232
BssMI GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
BssNI GRCGYC 3 cut(s) 983, 1418, 1571
BssT1I CCWWGG 2 cut(s) 193, 1004
Bst2UI CCWGG 1 cut(s) 425
Bst4CI ACNGT 3 cut(s) 204, 225, 1171
Bst6I CTCTTC 5 cut(s) 245, 272, 802, 936, 1055
BstACI GRCGYC 3 cut(s) 983, 1418, 1571
BstBAI YACGTR 1 cut(s) 1712
BstBI TTCGAA 2 cut(s) 690, 967
BstC8I GCNNGC 4 cut(s) 1011, 1374, 1416, 1449
BstDEI CTNAG 6 cut(s) 614, 634, 751, 1320, 1503, 1871
BstDSI CCRYGG 2 cut(s) 193, 1232
BstEII GGTNACC 1 cut(s) 1141
BstF5I GGATG 5 cut(s) 234, 261, 276, 802, 901
BstFNI CGCG 3 cut(s) 488, 1234, 1623
BstH2I RGCGCY 3 cut(s) 1057, 1421, 1574
BstHHI GCGC 6 cut(s) 488, 715, 1056, 1420, 1573, 1623
BstKTI GATC 7 cut(s) 433, 613, 655, 740, 1469, 1670, 1811
BstMAI GTCTC 2 cut(s) 210, 306
BstMBI GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
BstMCI CGRYCG 2 cut(s) 1043, 1238
BstMWI GCNNNNNNNGC 9 cut(s) 195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
BstNI CCWGG 1 cut(s) 425
BstNSI RCATGY 1 cut(s) 12
BstPI GGTNACC 1 cut(s) 1141
BstSCI CCNGG 4 cut(s) 91, 423, 561, 606
BstUI CGCG 3 cut(s) 488, 1234, 1623
BstV1I GCAGC 6 cut(s) 521, 541, 606, 1000, 1557, 1809
BstV2I GAAGAC 3 cut(s) 414, 1194, 1728
BstX2I RGATCY 3 cut(s) 610, 1667, 1808
BstYI RGATCY 3 cut(s) 610, 1667, 1808
BstZI CGGCCG 1 cut(s) 1235
BsuI GTATCC 1 cut(s) 772
BsuRI GGCC 4 cut(s) 579, 1009, 1237, 1485
BtgI CCRYGG 2 cut(s) 193, 1232
BtgZI GCGATG 2 cut(s) 1008, 1100
BtrI CACGTC 2 cut(s) 300, 857
BtsCI GGATG 5 cut(s) 234, 261, 276, 802, 901
BtsIMutI CAGTG 4 cut(s) 642, 1486, 1572, 1770
Cac8I GCNNGC 4 cut(s) 1011, 1374, 1416, 1449
CfoI GCGC 6 cut(s) 488, 715, 1056, 1420, 1573, 1623
Cfr10I RCCGGY 4 cut(s) 579, 1145, 1372, 1447
Cfr13I GGNCC 1 cut(s) 558
Cfr42I CCGCGG 1 cut(s) 1235
CseI GACGC 3 cut(s) 419, 991, 1692
Csp6I GTAC 6 cut(s) 89, 748, 788, 1149, 1522, 1745
CspAI ACCGGT 1 cut(s) 1145
CspCI CAANNNNNGTGG 2 cut(s) 444, 479
CviAII CATG 3 cut(s) 9, 181, 194
CviQI GTAC 6 cut(s) 89, 748, 788, 1149, 1522, 1745
DdeI CTNAG 6 cut(s) 614, 634, 751, 1320, 1503, 1871
DinI GGCGCC 2 cut(s) 1419, 1572
DpnI GATC 7 cut(s) 432, 612, 654, 739, 1468, 1669, 1810
DpnII GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
DraIII CACNNNGTG 1 cut(s) 1664
DriI GACNNNNNGTC 1 cut(s) 1729
EaeI YGGCCR 3 cut(s) 577, 1235, 1483
EagI CGGCCG 1 cut(s) 1235
Eam1104I CTCTTC 5 cut(s) 245, 272, 802, 936, 1055
Eam1105I GACNNNNNGTC 1 cut(s) 1729
EarI CTCTTC 5 cut(s) 245, 272, 802, 936, 1055
EciI GGCGGA 6 cut(s) 302, 316, 987, 1419, 1479, 1575
Ecl136II GAGCTC 1 cut(s) 1656
EclXI CGGCCG 1 cut(s) 1235
Eco130I CCWWGG 2 cut(s) 193, 1004
Eco147I AGGCCT 1 cut(s) 1009
Eco24I GRGCYC 1 cut(s) 1658
Eco47I GGWCC 1 cut(s) 558
Eco52I CGGCCG 1 cut(s) 1235
Eco53kI GAGCTC 1 cut(s) 1656
Eco57I CTGAAG 3 cut(s) 960, 1206, 1628
Eco88I CYCGRG 1 cut(s) 623
Eco91I GGTNACC 1 cut(s) 1141
EcoICRI GAGCTC 1 cut(s) 1656
EcoO109I RGGNCCY 1 cut(s) 558
EcoO65I GGTNACC 1 cut(s) 1141
EcoRII CCWGG 1 cut(s) 423
EcoT14I CCWWGG 2 cut(s) 193, 1004
EcoT22I ATGCAT 1 cut(s) 10
EcoT38I GRGCYC 1 cut(s) 1658
EgeI GGCGCC 2 cut(s) 1419, 1572
EheI GGCGCC 2 cut(s) 1419, 1572
ErhI CCWWGG 2 cut(s) 193, 1004
Esp3I CGTCTC 2 cut(s) 210, 306
FaeI CATG 3 cut(s) 12, 184, 197
FaqI GGGAC 2 cut(s) 116, 356
FatI CATG 3 cut(s) 8, 180, 193
FauI CCCGC 3 cut(s) 816, 1026, 1616
FokI GGATG 5 cut(s) 221, 248, 263, 789, 888
FriOI GRGCYC 1 cut(s) 1658
FspBI CTAG 3 cut(s) 1404, 1827, 1866
GlaI GCGC 6 cut(s) 487, 714, 1055, 1419, 1572, 1622
GsaI CCCAGC 1 cut(s) 516
GsuI CTGGAG 2 cut(s) 1462, 1794
HaeII RGCGCY 3 cut(s) 1057, 1421, 1574
HaeIII GGCC 4 cut(s) 579, 1009, 1237, 1485
HgaI GACGC 3 cut(s) 419, 991, 1692
HhaI GCGC 6 cut(s) 488, 715, 1056, 1420, 1573, 1623
Hin1I GRCGYC 3 cut(s) 983, 1418, 1571
Hin1II CATG 3 cut(s) 12, 184, 197
Hin6I GCGC 6 cut(s) 486, 713, 1054, 1418, 1571, 1621
HinP1I GCGC 6 cut(s) 486, 713, 1054, 1418, 1571, 1621
HincII GTYRAC 3 cut(s) 720, 860, 1759
HindII GTYRAC 3 cut(s) 720, 860, 1759
HindIII AAGCTT 1 cut(s) 1886
HinfI GANTC 6 cut(s) 344, 500, 632, 769, 1036, 1552
HphI GGTGA 8 cut(s) 131, 140, 192, 408, 584, 959, 966, 1135
Hpy166II GTNNAC 7 cut(s) 221, 720, 860, 899, 1330, 1537, 1759
Hpy188III TCNNGA 5 cut(s) 440, 650, 1339, 1458, 1673
Hpy8I GTNNAC 7 cut(s) 221, 720, 860, 899, 1330, 1537, 1759
Hpy99I CGWCG 6 cut(s) 686, 897, 985, 1243, 1464, 1708
HpyAV CCTTC 3 cut(s) 867, 1069, 1202
HpyCH4III ACNGT 3 cut(s) 204, 225, 1171
HpyCH4V TGCA 2 cut(s) 8, 85
HpyF10VI GCNNNNNNNGC 9 cut(s) 195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
HpyF3I CTNAG 6 cut(s) 614, 634, 751, 1320, 1503, 1871
Hsp92I GRCGYC 3 cut(s) 983, 1418, 1571
Hsp92II CATG 3 cut(s) 12, 184, 197
HspAI GCGC 6 cut(s) 486, 713, 1054, 1418, 1571, 1621
KasI GGCGCC 2 cut(s) 1417, 1570
Kpn2I TCCGGA 1 cut(s) 649
KpnI GGTACC 1 cut(s) 1152
KroI GCCGGC 2 cut(s) 1372, 1447
KroNI GCCGGC 2 cut(s) 1374, 1449
KspI CCGCGG 1 cut(s) 1235
Kzo9I GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
LmnI GCTCC 3 cut(s) 591, 1045, 1603
Lsp1109I GCAGC 6 cut(s) 521, 541, 606, 1000, 1557, 1809
LweI GCATC 3 cut(s) 422, 1690, 1914
MaeI CTAG 3 cut(s) 1404, 1827, 1866
MaeIII GTNAC 4 cut(s) 11, 472, 972, 1141
MalI GATC 7 cut(s) 432, 612, 654, 739, 1468, 1669, 1810
MboI GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
MflI RGATCY 3 cut(s) 610, 1667, 1808
MhlI GDGCHC 1 cut(s) 1658
MluCI AATT 7 cut(s) 56, 700, 759, 954, 1029, 1560, 1676
Mly113I GGCGCC 2 cut(s) 1418, 1571
MlyI GAGTC 3 cut(s) 338, 626, 1561
MmeI TCCRAC 3 cut(s) 1023, 1373, 1376
Mph1103I ATGCAT 1 cut(s) 10
MroI TCCGGA 1 cut(s) 649
MroNI GCCGGC 2 cut(s) 1372, 1447
MseI TTAA 6 cut(s) 60, 215, 762, 1559, 1635, 1839
MspA1I CMGCKG 5 cut(s) 512, 1234, 1414, 1542, 1800
MspR9I CCNGG 4 cut(s) 93, 425, 563, 608
Mva1269I GAATGC 2 cut(s) 10, 435
MvaI CCWGG 1 cut(s) 425
MvnI CGCG 3 cut(s) 488, 1234, 1623
MwoI GCNNNNNNNGC 9 cut(s) 195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
NaeI GCCGGC 2 cut(s) 1374, 1449
NarI GGCGCC 2 cut(s) 1418, 1571
NciI CCSGG 3 cut(s) 93, 563, 608
NcoI CCATGG 1 cut(s) 193
NdeII GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
NgoMIV GCCGGC 2 cut(s) 1372, 1447
NlaIII CATG 3 cut(s) 12, 184, 197
NlaIV GGNNCC 5 cut(s) 560, 1047, 1150, 1419, 1572
NmuCI GTSAC 2 cut(s) 972, 1141
NsiI ATGCAT 1 cut(s) 10
NspI RCATGY 1 cut(s) 12
NspV TTCGAA 2 cut(s) 690, 967
PceI AGGCCT 1 cut(s) 1009
PcsI WCGNNNNNNNCGW 4 cut(s) 687, 875, 977, 1692
PctI GAATGC 2 cut(s) 10, 435
PdiI GCCGGC 2 cut(s) 1374, 1449
PfeI GAWTC 3 cut(s) 500, 769, 1036
PflFI GACNNNGTC 1 cut(s) 1504
PinAI ACCGGT 1 cut(s) 1145
PleI GAGTC 3 cut(s) 338, 626, 1560
PluTI GGCGCC 2 cut(s) 1421, 1574
PpsI GAGTC 3 cut(s) 338, 626, 1560
Ppu21I YACGTR 1 cut(s) 1712
PpuMI RGGWCCY 1 cut(s) 558
Psp124BI GAGCTC 1 cut(s) 1658
Psp1406I AACGTT 2 cut(s) 39, 963
Psp5II RGGWCCY 1 cut(s) 558
Psp6I CCWGG 1 cut(s) 423
PspEI GGTNACC 1 cut(s) 1141
PspFI CCCAGC 1 cut(s) 512
PspGI CCWGG 1 cut(s) 423
PspN4I GGNNCC 5 cut(s) 560, 1047, 1150, 1419, 1572
PspPI GGNCC 1 cut(s) 558
PspPPI RGGWCCY 1 cut(s) 558
PsuI RGATCY 3 cut(s) 610, 1667, 1808
PsyI GACNNNGTC 1 cut(s) 1504
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 6 cut(s) 90, 749, 789, 1150, 1523, 1746
RsaNI GTAC 6 cut(s) 89, 748, 788, 1149, 1522, 1745
SacI GAGCTC 1 cut(s) 1658
SacII CCGCGG 1 cut(s) 1235
SaqAI TTAA 6 cut(s) 60, 215, 762, 1559, 1635, 1839
Sau3AI GATC 7 cut(s) 430, 610, 652, 737, 1466, 1667, 1808
Sau96I GGNCC 1 cut(s) 558
SchI GAGTC 3 cut(s) 338, 626, 1561
ScrFI CCNGG 4 cut(s) 93, 425, 563, 608
SduI GDGCHC 1 cut(s) 1658
SfaNI GCATC 3 cut(s) 422, 1690, 1914
SfoI GGCGCC 2 cut(s) 1419, 1572
Sfr303I CCGCGG 1 cut(s) 1235
SfuI TTCGAA 2 cut(s) 690, 967
SgrBI CCGCGG 1 cut(s) 1235
SinI GGWCC 1 cut(s) 558
SmlI CTYRAG 1 cut(s) 1889
SmoI CTYRAG 1 cut(s) 1889
SpeI ACTAGT 1 cut(s) 1403
Sse9I AATT 7 cut(s) 56, 700, 759, 954, 1029, 1560, 1676
SseBI AGGCCT 1 cut(s) 1009
SspDI GGCGCC 2 cut(s) 1417, 1570
SspI AATATT 1 cut(s) 451
SspMI CTAG 3 cut(s) 1404, 1827, 1866
SstI GAGCTC 1 cut(s) 1658
StuI AGGCCT 1 cut(s) 1009
StyD4I CCNGG 4 cut(s) 91, 423, 561, 606
StyI CCWWGG 2 cut(s) 193, 1004
TaaI ACNGT 3 cut(s) 204, 225, 1171
TaqI TCGA 7 cut(s) 400, 681, 690, 892, 967, 1340, 1508
TaqII GACCGA 1 cut(s) 1029
TasI AATT 7 cut(s) 56, 700, 759, 954, 1029, 1560, 1676
TatI WGTACW 1 cut(s) 1744
TfiI GAWTC 3 cut(s) 500, 769, 1036
Tru1I TTAA 6 cut(s) 60, 215, 762, 1559, 1635, 1839
Tru9I TTAA 6 cut(s) 60, 215, 762, 1559, 1635, 1839
TscAI CASTG 4 cut(s) 642, 1486, 1572, 1777
TseFI GTSAC 2 cut(s) 972, 1141
TseI GCWGC 6 cut(s) 509, 529, 594, 1013, 1545, 1797
Tsp45I GTSAC 2 cut(s) 972, 1141
TspDTI ATGAA 4 cut(s) 17, 1277, 1849, 1913
TspGWI ACGGA 4 cut(s) 926, 1545, 1657, 1804
TspRI CASTG 4 cut(s) 642, 1486, 1572, 1777
Tth111I GACNNNGTC 1 cut(s) 1504
VpaK11BI GGWCC 1 cut(s) 558
XapI RAATTY 1 cut(s) 56
XceI RCATGY 1 cut(s) 12
XspI CTAG 3 cut(s) 1404, 1827, 1866
Zsp2I ATGCAT 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.