May be involved in modulation of pathogen defense and leaf cell death
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17430 AT2G17480 AT5G65970 AT5G65970 |
| fragaria_vesca | FvH4_1g10150 FvH4_1g10150 FvH4_1g10150 FvH4_1g10150 FvH4_1g10150 FvH4_1g10150 |
| malus_domestica | MD02G1113500.v1.1 MD15G1228700.v1.1 |
| prunus_persica | Prupe.7G185400_v2.0.a1 Prupe.7G185400_v2.0.a1 |
| pyrus_communis | pycom02g08850 pycom15g20380 |
| rosa_chinensis | RchiOBHm_Chr2g0096921 |
| rosa_laevigata | RLG00000016683 |
| rosa_multiflora | Rmu_co8349527.1_g000001 Rmu_co8468103.1_g000001 Rmu_sc0033632.1_g000001 Rmu_ssc0000215.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00145150 |
| rosa_rugosa | Rorug02G0061900 |
| rosa_samantha | Rh2AG109900 Rh2BG111800 Rh2CG113900 Rh2DG113000 |
| rosa_wichuraiana | Rw2G008490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 447 |
| Acc16I | TGCGCA | 1 cut(s) | 665 |
| Acc36I | ACCTGC | 1 cut(s) | 1564 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccII | CGCG | 1 cut(s) | 92 |
| AciI | CCGC | 2 cut(s) | 1247, 1392 |
| AclI | AACGTT | 1 cut(s) | 636 |
| AclWI | GGATC | 5 cut(s) | 277, 844, 1424, 1466, 1479 |
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AcsI | RAATTY | 3 cut(s) | 315, 704, 1087 |
| AcvI | CACGTG | 1 cut(s) | 535 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 3 cut(s) | 109, 413, 960 |
| AfeI | AGCGCT | 1 cut(s) | 222 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1511, 1512, 1513 |
| AjnI | CCWGG | 3 cut(s) | 116, 1290, 1580 |
| AluBI | AGCT | 9 cut(s) | 30, 100, 188, 233, 251, 389, 431, 1114, 1305 |
| AluI | AGCT | 9 cut(s) | 30, 100, 188, 233, 251, 389, 431, 1114, 1305 |
| Alw21I | GWGCWC | 1 cut(s) | 102 |
| Alw26I | GTCTC | 6 cut(s) | 71, 333, 394, 599, 1281, 1403 |
| AlwI | GGATC | 5 cut(s) | 277, 844, 1424, 1466, 1479 |
| Ama87I | CYCGRG | 2 cut(s) | 563, 1336 |
| Aor51HI | AGCGCT | 1 cut(s) | 222 |
| AoxI | GGCC | 3 cut(s) | 60, 992, 1224 |
| ApeKI | GCWGC | 2 cut(s) | 349, 559 |
| ApoI | RAATTY | 3 cut(s) | 315, 704, 1087 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1040 |
| AspLEI | GCGC | 4 cut(s) | 7, 223, 666, 695 |
| AspS9I | GGNCC | 4 cut(s) | 175, 1225, 1343, 1402 |
| AsuC2I | CCSGG | 1 cut(s) | 1562 |
| AsuHPI | GGTGA | 2 cut(s) | 1261, 1431 |
| AvaI | CYCGRG | 2 cut(s) | 563, 1336 |
| AvaII | GGWCC | 3 cut(s) | 175, 1343, 1402 |
| BalI | TGGCCA | 1 cut(s) | 62 |
| BamHI | GGATCC | 1 cut(s) | 1471 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 2 cut(s) | 102, 1184 |
| BbrPI | CACGTG | 1 cut(s) | 535 |
| BbsI | GAAGAC | 1 cut(s) | 1265 |
| Bbv12I | GWGCWC | 1 cut(s) | 102 |
| BbvI | GCAGC | 2 cut(s) | 336, 546 |
| BccI | CCATC | 5 cut(s) | 816, 902, 1171, 1208, 1505 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 914, 948, 1538, 1572 |
| BciT130I | CCWGG | 3 cut(s) | 118, 1292, 1582 |
| BciVI | GTATCC | 1 cut(s) | 455 |
| BcnI | CCSGG | 1 cut(s) | 1562 |
| BcoDI | GTCTC | 6 cut(s) | 71, 333, 394, 599, 1281, 1403 |
| BfaI | CTAG | 3 cut(s) | 266, 390, 956 |
| BfoI | RGCGCY | 2 cut(s) | 8, 224 |
| BfuAI | ACCTGC | 1 cut(s) | 1564 |
| BfuI | GTATCC | 1 cut(s) | 455 |
| BglII | AGATCT | 1 cut(s) | 422 |
| BisI | GCNGC | 3 cut(s) | 350, 560, 1392 |
| BlpI | GCTNAGC | 1 cut(s) | 1387 |
| BlsI | GCNGC | 3 cut(s) | 351, 561, 1393 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 1292, 1562, 1582 |
| Bme18I | GGWCC | 3 cut(s) | 175, 1343, 1402 |
| BmeT110I | CYCGRG | 2 cut(s) | 563, 1336 |
| BmgT120I | GGNCC | 4 cut(s) | 175, 1225, 1343, 1402 |
| BmiI | GGNNCC | 3 cut(s) | 6, 967, 1473 |
| BmrFI | CCNGG | 4 cut(s) | 118, 1292, 1562, 1582 |
| BmsI | GCATC | 2 cut(s) | 851, 1363 |
| BpiI | GAAGAC | 1 cut(s) | 1265 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 68, 100, 365, 397 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1387 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| BpuMI | CCSGG | 1 cut(s) | 1562 |
| BsaAI | YACGTR | 1 cut(s) | 535 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 8 cut(s) | 63, 117, 1221, 1290, 1291, 1335, 1560, 1581 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1511, 1512, 1513 |
| Bse1I | ACTGG | 2 cut(s) | 463, 1375 |
| Bse3DI | GCAATG | 2 cut(s) | 306, 673 |
| BseBI | CCWGG | 3 cut(s) | 118, 1292, 1582 |
| BseDI | CCNNGG | 8 cut(s) | 63, 117, 1221, 1290, 1291, 1335, 1560, 1581 |
| BseGI | GGATG | 7 cut(s) | 504, 748, 827, 842, 894, 1217, 1331 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1511, 1512, 1513 |
| BseMI | GCAATG | 2 cut(s) | 306, 673 |
| BseMII | CTCAG | 3 cut(s) | 243, 1187, 1401 |
| BseNI | ACTGG | 2 cut(s) | 463, 1375 |
| BseRI | GAGGAG | 3 cut(s) | 386, 389, 1318 |
| BseXI | GCAGC | 2 cut(s) | 336, 546 |
| BseYI | CCCAGC | 3 cut(s) | 19, 44, 52 |
| BsgI | GTGCAG | 1 cut(s) | 485 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| Bsh1285I | CGRYCG | 1 cut(s) | 106 |
| BshFI | GGCC | 3 cut(s) | 62, 994, 1226 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiEI | CGRYCG | 1 cut(s) | 106 |
| BsiHKAI | GWGCWC | 1 cut(s) | 102 |
| BsiHKCI | CYCGRG | 2 cut(s) | 563, 1336 |
| BsiSI | CCGG | 2 cut(s) | 397, 1562 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1511, 1512, 1513 |
| BsmAI | GTCTC | 6 cut(s) | 71, 333, 394, 599, 1281, 1403 |
| BsmI | GAATGC | 1 cut(s) | 1040 |
| BsnI | GGCC | 3 cut(s) | 62, 994, 1226 |
| Bso31I | GGTCTC | 1 cut(s) | 71 |
| BsoBI | CYCGRG | 2 cut(s) | 563, 1336 |
| Bsp1286I | GDGCHC | 2 cut(s) | 102, 1184 |
| Bsp143I | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1387 |
| Bsp19I | CCATGG | 1 cut(s) | 63 |
| BspACI | CCGC | 2 cut(s) | 1247, 1392 |
| BspANI | GGCC | 3 cut(s) | 62, 994, 1226 |
| BspCNI | CTCAG | 3 cut(s) | 244, 1186, 1400 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BspHI | TCATGA | 1 cut(s) | 858 |
| BspLI | GGNNCC | 3 cut(s) | 6, 967, 1473 |
| BspMI | ACCTGC | 1 cut(s) | 1564 |
| BspPI | GGATC | 5 cut(s) | 277, 844, 1424, 1466, 1479 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 1 cut(s) | 71 |
| BsrDI | GCAATG | 2 cut(s) | 306, 673 |
| BsrI | ACTGG | 2 cut(s) | 463, 1375 |
| BssECI | CCNNGG | 8 cut(s) | 63, 117, 1221, 1290, 1291, 1335, 1560, 1581 |
| BssMI | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 2 cut(s) | 63, 1221 |
| Bst2UI | CCWGG | 3 cut(s) | 118, 1292, 1582 |
| Bst4CI | ACNGT | 5 cut(s) | 107, 545, 661, 682, 1029 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 499 |
| BstBAI | YACGTR | 1 cut(s) | 535 |
| BstC8I | GCNNGC | 3 cut(s) | 90, 933, 1116 |
| BstDEI | CTNAG | 3 cut(s) | 252, 1173, 1387 |
| BstDSI | CCRYGG | 1 cut(s) | 63 |
| BstF5I | GGATG | 7 cut(s) | 504, 748, 827, 842, 894, 1217, 1331 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 224 |
| BstHHI | GCGC | 4 cut(s) | 7, 223, 666, 695 |
| BstKTI | GATC | 8 cut(s) | 285, 425, 734, 798, 852, 1420, 1432, 1474 |
| BstMAI | GTCTC | 6 cut(s) | 71, 333, 394, 599, 1281, 1403 |
| BstMBI | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| BstMCI | CGRYCG | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 499, 568 |
| BstNI | CCWGG | 3 cut(s) | 118, 1292, 1582 |
| BstNSI | RCATGY | 1 cut(s) | 935 |
| BstSCI | CCNGG | 4 cut(s) | 116, 1290, 1560, 1580 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BstV1I | GCAGC | 2 cut(s) | 336, 546 |
| BstV2I | GAAGAC | 1 cut(s) | 1265 |
| BstX2I | RGATCY | 2 cut(s) | 422, 1471 |
| BstYI | RGATCY | 2 cut(s) | 422, 1471 |
| BsuI | GTATCC | 1 cut(s) | 455 |
| BsuRI | GGCC | 3 cut(s) | 62, 994, 1226 |
| BtgI | CCRYGG | 1 cut(s) | 63 |
| BtgZI | GCGATG | 1 cut(s) | 1340 |
| BtsCI | GGATG | 7 cut(s) | 504, 748, 827, 842, 894, 1217, 1331 |
| BtsI | GCAGTG | 2 cut(s) | 942, 1349 |
| BtsIMutI | CAGTG | 5 cut(s) | 666, 678, 942, 1025, 1349 |
| BveI | ACCTGC | 1 cut(s) | 1564 |
| Cac8I | GCNNGC | 3 cut(s) | 90, 933, 1116 |
| CciI | TCATGA | 1 cut(s) | 858 |
| CfoI | GCGC | 4 cut(s) | 7, 223, 666, 695 |
| Cfr13I | GGNCC | 4 cut(s) | 175, 1225, 1343, 1402 |
| CseI | GACGC | 1 cut(s) | 1270 |
| Csp6I | GTAC | 3 cut(s) | 108, 412, 959 |
| CviAII | CATG | 8 cut(s) | 64, 354, 859, 932, 1100, 1189, 1243, 1406 |
| CviQI | GTAC | 3 cut(s) | 108, 412, 959 |
| DdeI | CTNAG | 3 cut(s) | 252, 1173, 1387 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DpnI | GATC | 8 cut(s) | 284, 424, 733, 797, 851, 1419, 1431, 1473 |
| DpnII | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| Ecl136II | GAGCTC | 1 cut(s) | 100 |
| Eco130I | CCWWGG | 2 cut(s) | 63, 1221 |
| Eco24I | GRGCYC | 2 cut(s) | 102, 1184 |
| Eco31I | GGTCTC | 1 cut(s) | 71 |
| Eco47I | GGWCC | 3 cut(s) | 175, 1343, 1402 |
| Eco47III | AGCGCT | 1 cut(s) | 222 |
| Eco53kI | GAGCTC | 1 cut(s) | 100 |
| Eco72I | CACGTG | 1 cut(s) | 535 |
| Eco88I | CYCGRG | 2 cut(s) | 563, 1336 |
| EcoICRI | GAGCTC | 1 cut(s) | 100 |
| EcoO109I | RGGNCCY | 2 cut(s) | 175, 1225 |
| EcoRI | GAATTC | 1 cut(s) | 1087 |
| EcoRII | CCWGG | 3 cut(s) | 116, 1290, 1580 |
| EcoT14I | CCWWGG | 2 cut(s) | 63, 1221 |
| EcoT38I | GRGCYC | 2 cut(s) | 102, 1184 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 2 cut(s) | 63, 1221 |
| FaeI | CATG | 8 cut(s) | 67, 357, 862, 935, 1103, 1192, 1246, 1409 |
| FatI | CATG | 8 cut(s) | 63, 353, 858, 931, 1099, 1188, 1242, 1405 |
| Fnu4HI | GCNGC | 3 cut(s) | 350, 560, 1392 |
| FokI | GGATG | 7 cut(s) | 491, 755, 829, 834, 881, 1204, 1318 |
| FriOI | GRGCYC | 2 cut(s) | 102, 1184 |
| Fsp4HI | GCNGC | 3 cut(s) | 350, 560, 1392 |
| FspBI | CTAG | 3 cut(s) | 266, 390, 956 |
| FspI | TGCGCA | 1 cut(s) | 665 |
| GlaI | GCGC | 4 cut(s) | 6, 222, 665, 694 |
| GluI | GCNGC | 3 cut(s) | 350, 560, 1392 |
| GsaI | CCCAGC | 3 cut(s) | 23, 48, 56 |
| HaeII | RGCGCY | 2 cut(s) | 8, 224 |
| HaeIII | GGCC | 3 cut(s) | 62, 994, 1226 |
| HapII | CCGG | 2 cut(s) | 397, 1562 |
| HgaI | GACGC | 1 cut(s) | 1270 |
| HhaI | GCGC | 4 cut(s) | 7, 223, 666, 695 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 8 cut(s) | 67, 357, 862, 935, 1103, 1192, 1246, 1409 |
| Hin6I | GCGC | 4 cut(s) | 5, 221, 664, 693 |
| HinP1I | GCGC | 4 cut(s) | 5, 221, 664, 693 |
| HinfI | GANTC | 8 cut(s) | 262, 380, 402, 577, 672, 949, 1003, 1325 |
| HpaII | CCGG | 2 cut(s) | 397, 1562 |
| HphI | GGTGA | 2 cut(s) | 1261, 1431 |
| Hpy166II | GTNNAC | 2 cut(s) | 110, 783 |
| Hpy188I | TCNGA | 5 cut(s) | 649, 970, 1035, 1176, 1417 |
| Hpy8I | GTNNAC | 2 cut(s) | 110, 783 |
| HpyAV | CCTTC | 5 cut(s) | 166, 188, 235, 1315, 1452 |
| HpyCH4III | ACNGT | 5 cut(s) | 107, 545, 661, 682, 1029 |
| HpyCH4IV | ACGT | 3 cut(s) | 194, 534, 636 |
| HpyCH4V | TGCA | 6 cut(s) | 36, 453, 493, 502, 935, 1354 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 499, 568 |
| HpyF3I | CTNAG | 3 cut(s) | 252, 1173, 1387 |
| HpySE526I | ACGT | 3 cut(s) | 194, 534, 636 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 8 cut(s) | 67, 357, 862, 935, 1103, 1192, 1246, 1409 |
| HspAI | GCGC | 4 cut(s) | 5, 221, 664, 693 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Kzo9I | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| LmnI | GCTCC | 5 cut(s) | 68, 97, 810, 971, 1310 |
| Lsp1109I | GCAGC | 2 cut(s) | 336, 546 |
| LweI | GCATC | 2 cut(s) | 851, 1363 |
| MaeI | CTAG | 3 cut(s) | 266, 390, 956 |
| MaeII | ACGT | 3 cut(s) | 194, 534, 636 |
| MaeIII | GTNAC | 5 cut(s) | 302, 828, 1168, 1373, 1437 |
| MalI | GATC | 8 cut(s) | 284, 424, 733, 797, 851, 1419, 1431, 1473 |
| MboI | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| MboII | GAAGA | 4 cut(s) | 86, 508, 1195, 1270 |
| MflI | RGATCY | 2 cut(s) | 422, 1471 |
| MhlI | GDGCHC | 2 cut(s) | 102, 1184 |
| MlsI | TGGCCA | 1 cut(s) | 62 |
| MluCI | AATT | 7 cut(s) | 315, 704, 918, 1047, 1087, 1105, 1131 |
| MluNI | TGGCCA | 1 cut(s) | 62 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 3 cut(s) | 374, 396, 1319 |
| MmeI | TCCRAC | 5 cut(s) | 316, 657, 742, 856, 993 |
| Mox20I | TGGCCA | 1 cut(s) | 62 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1040 |
| MscI | TGGCCA | 1 cut(s) | 62 |
| MseI | TTAA | 6 cut(s) | 246, 483, 656, 708, 810, 1008 |
| MslI | CAYNNNNRTG | 2 cut(s) | 621, 1247 |
| Msp20I | TGGCCA | 1 cut(s) | 62 |
| MspI | CCGG | 2 cut(s) | 397, 1562 |
| MspR9I | CCNGG | 4 cut(s) | 118, 1292, 1562, 1582 |
| Mva1269I | GAATGC | 1 cut(s) | 1040 |
| MvaI | CCWGG | 3 cut(s) | 118, 1292, 1582 |
| MvnI | CGCG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 499, 568 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 1 cut(s) | 1562 |
| NcoI | CCATGG | 1 cut(s) | 63 |
| NdeII | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| NlaIII | CATG | 8 cut(s) | 67, 357, 862, 935, 1103, 1192, 1246, 1409 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 967, 1473 |
| NmeAIII | GCCGAG | 1 cut(s) | 1116 |
| NmuCI | GTSAC | 2 cut(s) | 1373, 1437 |
| NsbI | TGCGCA | 1 cut(s) | 665 |
| NspI | RCATGY | 1 cut(s) | 935 |
| PaeI | GCATGC | 1 cut(s) | 935 |
| PagI | TCATGA | 1 cut(s) | 858 |
| PasI | CCCWGGG | 1 cut(s) | 1291 |
| PctI | GAATGC | 1 cut(s) | 1040 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1040 |
| PfeI | GAWTC | 5 cut(s) | 262, 577, 672, 949, 1003 |
| PkrI | GCNGC | 3 cut(s) | 351, 561, 1393 |
| PleI | GAGTC | 3 cut(s) | 374, 396, 1319 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PmaCI | CACGTG | 1 cut(s) | 535 |
| PmlI | CACGTG | 1 cut(s) | 535 |
| PpsI | GAGTC | 3 cut(s) | 374, 396, 1319 |
| Ppu21I | YACGTR | 1 cut(s) | 535 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| PsiI | TTATAA | 1 cut(s) | 447 |
| Psp124BI | GAGCTC | 1 cut(s) | 102 |
| Psp1406I | AACGTT | 1 cut(s) | 636 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| Psp6I | CCWGG | 3 cut(s) | 116, 1290, 1580 |
| PspCI | CACGTG | 1 cut(s) | 535 |
| PspFI | CCCAGC | 3 cut(s) | 19, 44, 52 |
| PspGI | CCWGG | 3 cut(s) | 116, 1290, 1580 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 967, 1473 |
| PspPI | GGNCC | 4 cut(s) | 175, 1225, 1343, 1402 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 184, 216 |
| PsuI | RGATCY | 2 cut(s) | 422, 1471 |
| RsaI | GTAC | 3 cut(s) | 109, 413, 960 |
| RsaNI | GTAC | 3 cut(s) | 108, 412, 959 |
| RseI | CAYNNNNRTG | 2 cut(s) | 621, 1247 |
| SacI | GAGCTC | 1 cut(s) | 102 |
| SaqAI | TTAA | 6 cut(s) | 246, 483, 656, 708, 810, 1008 |
| SatI | GCNGC | 3 cut(s) | 350, 560, 1392 |
| Sau3AI | GATC | 8 cut(s) | 282, 422, 731, 795, 849, 1417, 1429, 1471 |
| Sau96I | GGNCC | 4 cut(s) | 175, 1225, 1343, 1402 |
| SchI | GAGTC | 3 cut(s) | 374, 396, 1319 |
| ScrFI | CCNGG | 4 cut(s) | 118, 1292, 1562, 1582 |
| SduI | GDGCHC | 2 cut(s) | 102, 1184 |
| SfaNI | GCATC | 2 cut(s) | 851, 1363 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SinI | GGWCC | 3 cut(s) | 175, 1343, 1402 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 621, 1247 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| SphI | GCATGC | 1 cut(s) | 935 |
| Sse9I | AATT | 7 cut(s) | 315, 704, 918, 1047, 1087, 1105, 1131 |
| SsiI | CCGC | 2 cut(s) | 1247, 1392 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 1 cut(s) | 1592 |
| SspMI | CTAG | 3 cut(s) | 266, 390, 956 |
| SstI | GAGCTC | 1 cut(s) | 102 |
| StyD4I | CCNGG | 4 cut(s) | 116, 1290, 1560, 1580 |
| StyI | CCWWGG | 2 cut(s) | 63, 1221 |
| TaaI | ACNGT | 5 cut(s) | 107, 545, 661, 682, 1029 |
| TaiI | ACGT | 3 cut(s) | 197, 537, 639 |
| TaqI | TCGA | 6 cut(s) | 102, 580, 1206, 1285, 1422, 1548 |
| TasI | AATT | 7 cut(s) | 315, 704, 918, 1047, 1087, 1105, 1131 |
| TatI | WGTACW | 1 cut(s) | 958 |
| TauI | GCSGC | 1 cut(s) | 1394 |
| TfiI | GAWTC | 5 cut(s) | 262, 577, 672, 949, 1003 |
| Tru1I | TTAA | 6 cut(s) | 246, 483, 656, 708, 810, 1008 |
| Tru9I | TTAA | 6 cut(s) | 246, 483, 656, 708, 810, 1008 |
| TscAI | CASTG | 5 cut(s) | 666, 685, 942, 1032, 1356 |
| TseFI | GTSAC | 2 cut(s) | 1373, 1437 |
| TseI | GCWGC | 2 cut(s) | 349, 559 |
| Tsp45I | GTSAC | 2 cut(s) | 1373, 1437 |
| TspDTI | ATGAA | 7 cut(s) | 664, 674, 1065, 1205, 1224, 1434, 1515 |
| TspGWI | ACGGA | 1 cut(s) | 218 |
| TspRI | CASTG | 5 cut(s) | 666, 685, 942, 1032, 1356 |
| VpaK11BI | GGWCC | 3 cut(s) | 175, 1343, 1402 |
| XapI | RAATTY | 3 cut(s) | 315, 704, 1087 |
| XceI | RCATGY | 1 cut(s) | 935 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1040 |
| XspI | CTAG | 3 cut(s) | 266, 390, 956 |