Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011815

Physical Location & Seq

Genomic Coordinates Forward (+)

15353215 .. 15358446

Gene Structure 5232 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGTCCCGTGGCATTCAGAATCCTGTGCGTGGGCTATTCTTAAGGAGTTACCTTTCTCAAGTGAGTAGGGATAAATTGCCTGATATTGGTTCTGAATATGAAGGAGATGCTGACACTGTCAAGGACGCTGTTGAGTTTGTTCTCCAAAATTTCACTGAGATGAACAAACTTTGGGTGCGGATGCAACATCAGGGACCTGCCCGGGAAAAGGAGAAGCGGGAGAAAGAAAGGAGCGAGCTACGTGATCTTGTTGGTAAAAACTTGCATGTCCTCAGCCAGATAGAAGGTGTTGATCTGGATTTGTACAAAGATACGGTGCTTCCCAGAGTCCTGGAACAGGTTGTCAATTGTAAGGATGAGCTTGCACAGTTTTATTTGATGGATTGCATAATTCAAGTCTTTCCTGATGAGTACCACTTGCAAACTCTTGATATATTGTTAGGTGCTTGCCCCCAACTTCAGCCATCTGTTGATATCAAGACAGTTCTATCCCAGTTGATGGAAAGACTTTCAAATTATGCTGCTTCAAGTACAGAAGTGCTGCCTGAGTTTTTACAAGTAGAAGCTTTTTCGAAACTGAGCAATGCTATTGGAAAGGTGATTGAAGCACAAGTTGACATGCCTATCATCGGTGTTGTAACTCTATATTCATCTCTTCTTAAATTTACCCTCCATGTGCACCCTGATCGACTTGATTATGCTGACCAAGTGTTGGGCTCATTTGTTAAGAAACTCTCTGGAAAAGGGAAAATTCAAGACAGCAGGGCAACAAAACAAGTGGTTGCACTTTTAAGTGCTCCACTTGAGAAATATAATGATATTGTCACGGCTTTGAAGCTTACAAATTATCCTCGTGTCCTGGAATTTCTTGATAGTGGAACAAATAAAGTCATGGCTACTGTTATAATTCAGAGCATTATGAAAAATACAACTCATGTTTTAACTGCTGAGAAGGTTGAGGCATTATTTGAATTAATAAAAGGACTTATTGAGGATTTGGATGGGCCTCTTAATGATGAGGTTGATGAAGAGGATTTCAAGGAGGAGCAAAATTCAGTTGCGCGACTTATTCAAATGTTTTCTAATGATGATTCCGAAGAGATGTTTAAGATCATATGTACTGTGAAGAAGCACATCCTGAATGGAGGACCAAAGCGTTTGCCTTTTACTGTCCCTCCCCTAGTTTTCTCTTCTCTAAAGTTGGTTAGGAAATTGCAAGCCCGGGAAGAGAATCCATTTGGAGATGATGCATCAACCACACCAAAGAAAATTTTTCAGCTCTTGACTCAGACTATTGAGGCTCTGTTAAATGTTCCAGCACCTGAACTGGCATTACGGTTATACTTGCAATGTGCTGAGGCTGCAAATGACTGTGATTTGGAACCCGTTGCATATGAGTTCTTCACCCAAGCATATATTCTTTACGAAGAAGAAATTTCAGATTCGAAAGCACAGGTGACTGCCATTCATCTGATAGTTGGGACTCTCCAGAGGATGCATGTATTTGGTGTTGAAAACAGGGATACTTTAACTCACAAAGCCACGGGGTATTCGGCAAAGCTTTTAAAGAAGGCTGATCAGTGCCGAGCTGTTTATGCTTGCTCACATCTCTTCTGGGTTGACGATCAGGAGAACATGAAGGATGGAGAAAGGGTACTGATTTGCCTAAAGCGAGCTTTAAGAATCGCCAATGCTGCCCAGCAGATGTCCAGTGCTACACGGGGTAGCACCGGTTCTGTGGCGCTCTTTGTTGAAATACTGAACAAGTACCTTTATTTCTTTGAGAAGGGGAACCCACAGATAACGGTTGCTTCAGTTCAAAGCCTGATTGAATTGGTTACAACTGAACTGCAAAGCGACTCGGCCTCAGCAGAGCCATCTGTTGATGCTTTCTTTGCCAGCACACAGCGGTACATCCAGTTCCAGAAGCAGAAAGGCGGCGCAGTTGGTGAAAGATATGAGCCCATCAAGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

659

Amino Acids

73.97

Weight (kDa)

5.28

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	1 - 615	1.2e-226	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17790 AT3G51310
fragaria_vesca	FvH4_1g11410
malus_domestica	MD02G1126400.v1.1 MD15G1242400.v1.1
prunus_persica	Prupe.7G171800_v2.0.a1 Prupe.7G171800_v2.0.a1
pyrus_communis	pycom02g09870 pycom15g21360
rosa_chinensis	RchiOBHm_Chr2g0098981
rosa_laevigata	RLG00000016838
rosa_multiflora	Rmu_sc0000577.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143530
rosa_rugosa	Rorug02G0075400
rosa_samantha	Rh2AG124900 Rh2BG128100 Rh2CG129000 Rh2DG129200
rosa_wichuraiana	Rw2G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	905
Acc36I	ACCTGC	1 cut(s)	205
AccB7I	CCANNNNNTGG	2 cut(s)	499, 712
AccII	CGCG	1 cut(s)	1063
AciI	CCGC	4 cut(s)	178, 217, 1909, 1938
AcsI	RAATTY	7 cut(s)	148, 662, 750, 863, 1051, 1269, 1434
AcuI	CTGAAG	2 cut(s)	443, 1797
AfaI	GTAC	7 cut(s)	305, 413, 532, 1120, 1656, 1769, 1913
AfiI	CCNNNNNNNGG	7 cut(s)	29, 86, 208, 337, 499, 629, 712
AflII	CTTAAG	1 cut(s)	40
AgeI	ACCGGT	1 cut(s)	1730
AjnI	CCWGG	2 cut(s)	330, 858
AjuI	GAANNNNNNNTTGG	2 cut(s)	1401, 1433
AluBI	AGCT	8 cut(s)	238, 361, 566, 838, 1279, 1561, 1589, 1676
AluI	AGCT	8 cut(s)	238, 361, 566, 838, 1279, 1561, 1589, 1676
Alw21I	GWGCWC	2 cut(s)	681, 799
Alw44I	GTGCAC	1 cut(s)	677
AlwNI	CAGNNNCTG	1 cut(s)	1322
Ama87I	CYCGRG	2 cut(s)	201, 1221
AoxI	GGCC	2 cut(s)	1004, 1863
ApaLI	GTGCAC	1 cut(s)	677
ApeKI	GCWGC	4 cut(s)	521, 541, 1361, 1694
ApoI	RAATTY	7 cut(s)	148, 662, 750, 863, 1051, 1269, 1434
AseI	ATTAAT	1 cut(s)	974
AsiGI	ACCGGT	1 cut(s)	1730
AspLEI	GCGC	3 cut(s)	1063, 1744, 1943
AspS9I	GGNCC	3 cut(s)	194, 1004, 1148
AsuC2I	CCSGG	4 cut(s)	202, 203, 1222, 1223
AsuHPI	GGTGA	4 cut(s)	610, 1396, 1468, 1961
AsuII	TTCGAA	2 cut(s)	572, 1445
AvaI	CYCGRG	2 cut(s)	201, 1221
AvaII	GGWCC	2 cut(s)	194, 1148
BaeGI	GKGCMC	1 cut(s)	681
BanII	GRGCYC	2 cut(s)	719, 1965
BauI	CACGAG	1 cut(s)	852
Bbv12I	GWGCWC	2 cut(s)	681, 799
BbvCI	CCTCAGC	3 cut(s)	272, 1356, 1867
BbvI	GCAGC	4 cut(s)	508, 528, 1348, 1681
BccI	CCATC	7 cut(s)	373, 472, 493, 995, 1637, 1885, 1973
BceAI	ACGGC	1 cut(s)	843
BcgI	CGANNNNNNTGC	2 cut(s)	668, 702
BciT130I	CCWGG	2 cut(s)	332, 860
BciVI	GTATCC	1 cut(s)	1516
BclI	TGATCA	1 cut(s)	1576
BcnI	CCSGG	4 cut(s)	202, 203, 1222, 1223
BfaI	CTAG	1 cut(s)	1181
BfoI	RGCGCY	1 cut(s)	1745
BfrI	CTTAAG	1 cut(s)	40
BfuAI	ACCTGC	1 cut(s)	205
BfuI	GTATCC	1 cut(s)	1516
BisI	GCNGC	5 cut(s)	522, 542, 1362, 1695, 1939
BlsI	GCNGC	5 cut(s)	523, 543, 1363, 1696, 1940
Bme1390I	CCNGG	6 cut(s)	202, 203, 332, 860, 1222, 1223
Bme18I	GGWCC	2 cut(s)	194, 1148
BmeT110I	CYCGRG	2 cut(s)	201, 1221
BmgT120I	GGNCC	3 cut(s)	194, 1004, 1148
BmiI	GGNNCC	3 cut(s)	195, 1383, 1793
BmrFI	CCNGG	6 cut(s)	202, 203, 332, 860, 1222, 1223
BmrI	ACTGGG	1 cut(s)	487
BmsI	GCATC	6 cut(s)	97, 171, 1237, 1259, 1485, 1876
BmuI	ACTGGG	1 cut(s)	487
BpmI	CTGGAG	1 cut(s)	1472
Bpu10I	CCTNAGC	3 cut(s)	272, 1356, 1867
Bpu14I	TTCGAA	2 cut(s)	572, 1445
BpuEI	CTTGAG	2 cut(s)	42, 824
BpuMI	CCSGG	4 cut(s)	202, 203, 1222, 1223
BsaAI	YACGTR	1 cut(s)	242
BsaJI	CCNNGG	4 cut(s)	7, 201, 1221, 1542
BsaWI	WCCGGW	1 cut(s)	1730
BsaXI	ACNNNNNCTCC	4 cut(s)	1159, 1189, 1638, 1668
Bsc4I	CCNNNNNNNGG	7 cut(s)	29, 86, 208, 337, 499, 629, 712
Bse118I	RCCGGY	1 cut(s)	1730
Bse1I	ACTGG	4 cut(s)	493, 1332, 1710, 1918
Bse3DI	GCAATG	2 cut(s)	589, 1355
BseBI	CCWGG	2 cut(s)	332, 860
BseDI	CCNNGG	4 cut(s)	7, 201, 1221, 1542
BseGI	GGATG	7 cut(s)	186, 361, 1006, 1134, 1500, 1648, 1914
BseLI	CCNNNNNNNGG	7 cut(s)	29, 86, 208, 337, 499, 629, 712
BseMI	GCAATG	2 cut(s)	589, 1355
BseMII	CTCAG	8 cut(s)	147, 286, 537, 569, 939, 1301, 1347, 1881
BseNI	ACTGG	4 cut(s)	493, 1332, 1710, 1918
BseRI	GAGGAG	1 cut(s)	1058
BseSI	GKGCMC	1 cut(s)	681
BseXI	GCAGC	4 cut(s)	508, 528, 1348, 1681
BseYI	CCCAGC	1 cut(s)	1698
Bsh1236I	CGCG	1 cut(s)	1063
BshFI	GGCC	2 cut(s)	1006, 1865
BshTI	ACCGGT	1 cut(s)	1730
BsiHKAI	GWGCWC	2 cut(s)	681, 799
BsiHKCI	CYCGRG	2 cut(s)	201, 1221
BsiSI	CCGG	3 cut(s)	202, 1222, 1731
BslFI	GGGAC	3 cut(s)	207, 1157, 1495
BslI	CCNNNNNNNGG	7 cut(s)	29, 86, 208, 337, 499, 629, 712
BsmFI	GGGAC	3 cut(s)	207, 1157, 1495
BsmI	GAATGC	1 cut(s)	12
BsnI	GGCC	2 cut(s)	1006, 1865
BsoBI	CYCGRG	2 cut(s)	201, 1221
Bsp119I	TTCGAA	2 cut(s)	572, 1445
Bsp1286I	GDGCHC	4 cut(s)	681, 719, 799, 1965
Bsp1407I	TGTACA	1 cut(s)	303
Bsp143I	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
BspACI	CCGC	4 cut(s)	178, 217, 1909, 1938
BspANI	GGCC	2 cut(s)	1006, 1865
BspCNI	CTCAG	8 cut(s)	148, 285, 538, 570, 940, 1300, 1348, 1880
BspFNI	CGCG	1 cut(s)	1063
BspLI	GGNNCC	3 cut(s)	195, 1383, 1793
BspMI	ACCTGC	1 cut(s)	205
BspT104I	TTCGAA	2 cut(s)	572, 1445
BspTI	CTTAAG	1 cut(s)	40
BsrDI	GCAATG	2 cut(s)	589, 1355
BsrFI	RCCGGY	1 cut(s)	1730
BsrGI	TGTACA	1 cut(s)	303
BsrI	ACTGG	4 cut(s)	493, 1332, 1710, 1918
BssAI	RCCGGY	1 cut(s)	1730
BssECI	CCNNGG	4 cut(s)	7, 201, 1221, 1542
BssMI	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
BssSI	CACGAG	1 cut(s)	852
Bst2BI	CACGAG	1 cut(s)	852
Bst2UI	CCWGG	2 cut(s)	332, 860
Bst6I	CTCTTC	6 cut(s)	660, 1023, 1092, 1195, 1221, 1616
BstAFI	CTTAAG	1 cut(s)	40
BstAUI	TGTACA	1 cut(s)	303
BstBAI	YACGTR	1 cut(s)	242
BstBI	TTCGAA	2 cut(s)	572, 1445
BstC8I	GCNNGC	7 cut(s)	236, 363, 448, 1218, 1600, 1674, 1900
BstDEI	CTNAG	8 cut(s)	156, 272, 546, 578, 948, 1287, 1356, 1867
BstDSI	CCRYGG	2 cut(s)	7, 1542
BstENI	CCTNNNNNAGG	1 cut(s)	335
BstF5I	GGATG	7 cut(s)	186, 361, 1006, 1134, 1500, 1648, 1914
BstFNI	CGCG	1 cut(s)	1063
BstH2I	RGCGCY	1 cut(s)	1745
BstHHI	GCGC	3 cut(s)	1063, 1744, 1943
BstKTI	GATC	6 cut(s)	247, 295, 688, 1113, 1579, 1627
BstMBI	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
BstMWI	GCNNNNNNNGC	4 cut(s)	1361, 1595, 1694, 1895
BstNI	CCWGG	2 cut(s)	332, 860
BstNSI	RCATGY	3 cut(s)	269, 622, 1502
BstSCI	CCNGG	6 cut(s)	200, 201, 330, 858, 1220, 1221
BstSLI	GKGCMC	1 cut(s)	681
BstUI	CGCG	1 cut(s)	1063
BstV1I	GCAGC	4 cut(s)	508, 528, 1348, 1681
BstXI	CCANNNNNNTGG	1 cut(s)	331
BsuI	GTATCC	1 cut(s)	1516
BsuRI	GGCC	2 cut(s)	1006, 1865
BtgI	CCRYGG	2 cut(s)	7, 1542
BtsCI	GGATG	7 cut(s)	186, 361, 1006, 1134, 1500, 1648, 1914
BtsIMutI	CAGTG	4 cut(s)	114, 153, 1586, 1717
BveI	ACCTGC	1 cut(s)	205
Cac8I	GCNNGC	7 cut(s)	236, 363, 448, 1218, 1600, 1674, 1900
CaiI	CAGNNNCTG	1 cut(s)	1322
CfoI	GCGC	3 cut(s)	1063, 1744, 1943
Cfr10I	RCCGGY	1 cut(s)	1730
Cfr13I	GGNCC	3 cut(s)	194, 1004, 1148
Cfr9I	CCCGGG	2 cut(s)	201, 1221
CseI	GACGC	1 cut(s)	134
Csp6I	GTAC	7 cut(s)	304, 412, 531, 1119, 1655, 1768, 1912
CspAI	ACCGGT	1 cut(s)	1730
CspCI	CAANNNNNGTGG	2 cut(s)	759, 794
CviAII	CATG	7 cut(s)	266, 619, 674, 892, 935, 1499, 1636
CviQI	GTAC	7 cut(s)	304, 412, 531, 1119, 1655, 1768, 1912
DdeI	CTNAG	8 cut(s)	156, 272, 546, 578, 948, 1287, 1356, 1867
DpnI	GATC	6 cut(s)	246, 294, 687, 1112, 1578, 1626
DpnII	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
DraI	TTTAAA	1 cut(s)	1566
Eam1104I	CTCTTC	6 cut(s)	660, 1023, 1092, 1195, 1221, 1616
EarI	CTCTTC	6 cut(s)	660, 1023, 1092, 1195, 1221, 1616
Eco24I	GRGCYC	2 cut(s)	719, 1965
Eco32I	GATATC	1 cut(s)	475
Eco47I	GGWCC	2 cut(s)	194, 1148
Eco57I	CTGAAG	2 cut(s)	443, 1797
Eco88I	CYCGRG	2 cut(s)	201, 1221
EcoNI	CCTNNNNNAGG	1 cut(s)	335
EcoO109I	RGGNCCY	1 cut(s)	194
EcoRII	CCWGG	2 cut(s)	330, 858
EcoRV	GATATC	1 cut(s)	475
EcoT22I	ATGCAT	2 cut(s)	1252, 1500
EcoT38I	GRGCYC	2 cut(s)	719, 1965
FaeI	CATG	7 cut(s)	269, 622, 677, 895, 938, 1502, 1639
FaqI	GGGAC	3 cut(s)	207, 1157, 1495
FatI	CATG	7 cut(s)	265, 618, 673, 891, 934, 1498, 1635
FauI	CCCGC	1 cut(s)	210
FauNDI	CATATG	2 cut(s)	1115, 1393
FbaI	TGATCA	1 cut(s)	1576
Fnu4HI	GCNGC	5 cut(s)	522, 542, 1362, 1695, 1939
FokI	GGATG	7 cut(s)	193, 368, 1013, 1121, 1507, 1655, 1901
FriOI	GRGCYC	2 cut(s)	719, 1965
Fsp4HI	GCNGC	5 cut(s)	522, 542, 1362, 1695, 1939
FspBI	CTAG	1 cut(s)	1181
GlaI	GCGC	3 cut(s)	1062, 1743, 1942
GluI	GCNGC	5 cut(s)	522, 542, 1362, 1695, 1939
GsaI	CCCAGC	1 cut(s)	1702
GsuI	CTGGAG	1 cut(s)	1472
HaeII	RGCGCY	1 cut(s)	1745
HaeIII	GGCC	2 cut(s)	1006, 1865
HapII	CCGG	3 cut(s)	202, 1222, 1731
HgaI	GACGC	1 cut(s)	134
HhaI	GCGC	3 cut(s)	1063, 1744, 1943
Hin1II	CATG	7 cut(s)	269, 622, 677, 895, 938, 1502, 1639
Hin6I	GCGC	3 cut(s)	1061, 1742, 1941
HinP1I	GCGC	3 cut(s)	1061, 1742, 1941
HincII	GTYRAC	2 cut(s)	616, 1621
HindII	GTYRAC	2 cut(s)	616, 1621
HindIII	AAGCTT	3 cut(s)	564, 836, 1559
HinfI	GANTC	9 cut(s)	19, 327, 1091, 1231, 1285, 1442, 1483, 1683, 1859
HpaII	CCGG	3 cut(s)	202, 1222, 1731
HphI	GGTGA	4 cut(s)	610, 1396, 1468, 1961
Hpy166II	GTNNAC	3 cut(s)	616, 679, 1621
Hpy188I	TCNGA	7 cut(s)	18, 94, 912, 1096, 1290, 1441, 1473
Hpy8I	GTNNAC	3 cut(s)	616, 679, 1621
HpyAV	CCTTC	6 cut(s)	95, 278, 946, 1564, 1633, 1780
HpyCH4IV	ACGT	1 cut(s)	241
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1361, 1595, 1694, 1895
HpyF3I	CTNAG	8 cut(s)	156, 272, 546, 578, 948, 1287, 1356, 1867
HpySE526I	ACGT	1 cut(s)	241
Hsp92II	CATG	7 cut(s)	269, 622, 677, 895, 938, 1502, 1639
HspAI	GCGC	3 cut(s)	1061, 1742, 1941
Ksp22I	TGATCA	1 cut(s)	1576
Kzo9I	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
LmnI	GCTCC	3 cut(s)	231, 802, 1045
Lsp1109I	GCAGC	4 cut(s)	508, 528, 1348, 1681
LweI	GCATC	6 cut(s)	97, 171, 1237, 1259, 1485, 1876
MaeI	CTAG	1 cut(s)	1181
MaeII	ACGT	1 cut(s)	241
MaeIII	GTNAC	5 cut(s)	47, 637, 823, 1456, 1837
MalI	GATC	6 cut(s)	246, 294, 687, 1112, 1578, 1626
MboI	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
MfeI	CAATTG	1 cut(s)	346
MhlI	GDGCHC	4 cut(s)	681, 719, 799, 1965
MlyI	GAGTC	4 cut(s)	336, 1279, 1477, 1853
Mph1103I	ATGCAT	2 cut(s)	1252, 1500
MslI	CAYNNNNRTG	1 cut(s)	158
MspA1I	CMGCKG	1 cut(s)	1909
MspCI	CTTAAG	1 cut(s)	40
MspI	CCGG	3 cut(s)	202, 1222, 1731
MspR9I	CCNGG	6 cut(s)	202, 203, 332, 860, 1222, 1223
MunI	CAATTG	1 cut(s)	346
Mva1269I	GAATGC	1 cut(s)	12
MvaI	CCWGG	2 cut(s)	332, 860
MvnI	CGCG	1 cut(s)	1063
MwoI	GCNNNNNNNGC	4 cut(s)	1361, 1595, 1694, 1895
NciI	CCSGG	4 cut(s)	202, 203, 1222, 1223
NdeI	CATATG	2 cut(s)	1115, 1393
NdeII	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
NlaIII	CATG	7 cut(s)	269, 622, 677, 895, 938, 1502, 1639
NlaIV	GGNNCC	3 cut(s)	195, 1383, 1793
NmeAIII	GCCGAG	2 cut(s)	1610, 1841
NmuCI	GTSAC	2 cut(s)	823, 1456
NsiI	ATGCAT	2 cut(s)	1252, 1500
NspI	RCATGY	3 cut(s)	269, 622, 1502
NspV	TTCGAA	2 cut(s)	572, 1445
PctI	GAATGC	1 cut(s)	12
PfeI	GAWTC	5 cut(s)	19, 1091, 1231, 1442, 1683
PflFI	GACNNNGTC	1 cut(s)	116
PflMI	CCANNNNNTGG	2 cut(s)	499, 712
PfoI	TCCNGGA	2 cut(s)	330, 858
PinAI	ACCGGT	1 cut(s)	1730
PkrI	GCNGC	5 cut(s)	523, 543, 1363, 1696, 1940
PleI	GAGTC	4 cut(s)	335, 1279, 1477, 1853
PpsI	GAGTC	4 cut(s)	335, 1279, 1477, 1853
Ppu21I	YACGTR	1 cut(s)	242
PpuMI	RGGWCCY	1 cut(s)	194
PshBI	ATTAAT	1 cut(s)	974
PsiI	TTATAA	1 cut(s)	905
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	2 cut(s)	330, 858
PspFI	CCCAGC	1 cut(s)	1698
PspGI	CCWGG	2 cut(s)	330, 858
PspN4I	GGNNCC	3 cut(s)	195, 1383, 1793
PspPI	GGNCC	3 cut(s)	194, 1004, 1148
PspPPI	RGGWCCY	1 cut(s)	194
PsrI	GAACNNNNNNTAC	6 cut(s)	1317, 1349, 1717, 1749, 1904, 1936
PstNI	CAGNNNCTG	1 cut(s)	1322
PsyI	GACNNNGTC	1 cut(s)	116
RsaI	GTAC	7 cut(s)	305, 413, 532, 1120, 1656, 1769, 1913
RsaNI	GTAC	7 cut(s)	304, 412, 531, 1119, 1655, 1768, 1912
RseI	CAYNNNNRTG	1 cut(s)	158
SatI	GCNGC	5 cut(s)	522, 542, 1362, 1695, 1939
Sau3AI	GATC	6 cut(s)	244, 292, 685, 1110, 1576, 1624
Sau96I	GGNCC	3 cut(s)	194, 1004, 1148
SchI	GAGTC	4 cut(s)	336, 1279, 1477, 1853
ScrFI	CCNGG	6 cut(s)	202, 203, 332, 860, 1222, 1223
SduI	GDGCHC	4 cut(s)	681, 719, 799, 1965
SfaNI	GCATC	6 cut(s)	97, 171, 1237, 1259, 1485, 1876
SfuI	TTCGAA	2 cut(s)	572, 1445
SinI	GGWCC	2 cut(s)	194, 1148
SmaI	CCCGGG	2 cut(s)	203, 1223
SmiMI	CAYNNNNRTG	1 cut(s)	158
SmlI	CTYRAG	3 cut(s)	40, 57, 803
SmoI	CTYRAG	3 cut(s)	40, 57, 803
SsiI	CCGC	4 cut(s)	178, 217, 1909, 1938
SspMI	CTAG	1 cut(s)	1181
StyD4I	CCNGG	6 cut(s)	200, 201, 330, 858, 1220, 1221
TaiI	ACGT	1 cut(s)	244
TaqI	TCGA	3 cut(s)	572, 688, 1445
TatI	WGTACW	3 cut(s)	303, 530, 1118
TauI	GCSGC	1 cut(s)	1941
TfiI	GAWTC	5 cut(s)	19, 1091, 1231, 1442, 1683
TscAI	CASTG	4 cut(s)	121, 160, 1586, 1717
TseFI	GTSAC	2 cut(s)	823, 1456
TseI	GCWGC	4 cut(s)	521, 541, 1361, 1694
Tsp45I	GTSAC	2 cut(s)	823, 1456
TspDTI	ATGAA	7 cut(s)	114, 176, 639, 935, 1041, 1457, 1652
TspMI	CCCGGG	2 cut(s)	201, 1221
TspRI	CASTG	4 cut(s)	121, 160, 1586, 1717
Tth111I	GACNNNGTC	1 cut(s)	116
Van91I	CCANNNNNTGG	2 cut(s)	499, 712
Vha464I	CTTAAG	1 cut(s)	40
VneI	GTGCAC	1 cut(s)	677
VpaK11BI	GGWCC	2 cut(s)	194, 1148
VspI	ATTAAT	1 cut(s)	974
XagI	CCTNNNNNAGG	1 cut(s)	335
XapI	RAATTY	7 cut(s)	148, 662, 750, 863, 1051, 1269, 1434
XceI	RCATGY	3 cut(s)	269, 622, 1502
XmaI	CCCGGG	2 cut(s)	201, 1221
XspI	CTAG	1 cut(s)	1181
Zsp2I	ATGCAT	2 cut(s)	1252, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.