pycom15g22790

epoxide hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0011037
Physical Location & Seq
Reverse (-)
16861938 .. 16867928
5991 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 960 bp
ATGGTGAACCTAGTGGCACTTCAGCAACCCTTGCTGCATGGCCTTATGAAAATGGCCGGGGTCCGACCCTACGCGGTCGAGATCGAACCGTGCACGGTTATGAATTTCTGGGTCCCGAACGAGACCCTCAACAAACCCAAGAAGGGGGAAAAACCCGCTATGGTGTCGGGCCCAACGAAGCCCGTGGTGGTTCTCATCCATGGGTTCGCCGCCGAGGGGATAGTGACGTGGCAGTTCCAGGTTGGTGCTTTGACCAAAAGATACTCCGTCTATGTCCCCGACCTCCTCTTCTTCGGCGGCTCCTCCACCGACAACCCCGACCGGTCGCCGACTTTCCAGGCGGAGTGTGTGGCCGCGGGGTTGAGGAAGCTCGGGGTGGAGAGGTGTGCGGTGGTTGGGTTTAGTTACGGCGGAATGGTGGCGTTTAAGTTGGCCGAGATGTACCCGGACCTGGTGGAGTCCATGGTAGTGTCCGGGTCGATCTTGGCCATGACTTGCTCAGTCAGCGACGCAACGATGGAGAGGCTCGGGTTTTCGTCGTCGTCGGAGCTTCTACTGCCAAGCTCCGTGAAGGGGCTCAAGGCTCTGCTGTCTGTTGCTGCTCACAAGAAGCTGTATTTTCCTGATCGGCTTCACAAGGACTTCCTTGAGGTGATGTTCACCCACAGGAAGGAAAGGGCAGAACTCCTTGAAGCTTTAGTCATTGATACCAAGGACCCAACCATCCCCAAATTCCCACAGAGAATACATCTGTTATGGGGTGAAAATGATCAGATATTCAACCAGGAGCTTGCCCACAACATGAAAGTGCAATTAGGAGAAAATGCAACATTTGAAGGCATAAAGAAGGCAGGCCACTTGGTTCATTTGGAACGGCCCTGTGTTTACAACAGGTGTCTCAAGCGATTTCTTGCTTCCCTGCAGCACGAAGAAGATGGAGCCCCAAAAAAGGGACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

320

Amino Acids

35.36

Weight (kDa)

8.43

Isoelectric Point (pI)

33.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 59 - 292 1.5e-06 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 61 - 178 1.5e-19 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 63 - 294 4.6e-17 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18360 AT2G18360 AT4G36610
fragaria_vesca FvH4_1g13190 FvH4_1g13200
malus_domestica MD02G1146700.v1.1 MD15G1260700.v1.1
prunus_persica Prupe.7G155500_v2.0.a1
pyrus_communis pycom02g11600 pycom15g22790
rosa_chinensis RchiOBHm_Chr2g0101411
rosa_laevigata RLG00000017076
rosa_multiflora Rmu_sc0006128.1_g000006
rosa_roxburghii Rroxscaffold_2G00141330
rosa_rugosa Rorug02G0098400
rosa_samantha Rh2AG146700 Rh2BG152100 Rh2CG152600 Rh2DG152200
rosa_wichuraiana Rw2G011440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 74, 356
AciI CCGC 9 cut(s) 74, 156, 210, 297, 341, 354, 356, 389, 411
AcoI YGGCCR 4 cut(s) 54, 351, 432, 486
AcsI RAATTY 2 cut(s) 103, 731
AcuI CTGAAG 1 cut(s) 5
AfaI GTAC 1 cut(s) 443
AfiI CCNNNNNNNGG 8 cut(s) 143, 144, 216, 451, 573, 670, 949, 950
AgeI ACCGGT 1 cut(s) 321
AgsI TTSAA 3 cut(s) 692, 781, 836
AjiI CACGTC 1 cut(s) 228
AjnI CCWGG 4 cut(s) 237, 336, 450, 783
AluBI AGCT 6 cut(s) 370, 550, 564, 613, 695, 790
AluI AGCT 6 cut(s) 370, 550, 564, 613, 695, 790
Alw21I GWGCWC 1 cut(s) 95
Alw26I GTCTC 2 cut(s) 116, 902
Alw44I GTGCAC 1 cut(s) 91
Ama87I CYCGRG 2 cut(s) 371, 527
AoxI GGCC 8 cut(s) 40, 54, 169, 351, 432, 486, 853, 875
ApaI GGGCCC 1 cut(s) 173
ApaLI GTGCAC 1 cut(s) 91
ApeKI GCWGC 3 cut(s) 34, 599, 922
ApoI RAATTY 2 cut(s) 103, 731
AsiGI ACCGGT 1 cut(s) 321
AspS9I GGNCC 7 cut(s) 61, 112, 169, 170, 448, 715, 876
AsuC2I CCSGG 3 cut(s) 58, 446, 475
AsuHPI GGTGA 4 cut(s) 16, 652, 664, 773
AvaI CYCGRG 2 cut(s) 371, 527
AvaII GGWCC 4 cut(s) 61, 112, 448, 715
BaeGI GKGCMC 2 cut(s) 95, 173
BalI TGGCCA 1 cut(s) 488
BanII GRGCYC 3 cut(s) 173, 579, 943
Bbv12I GWGCWC 1 cut(s) 95
BbvI GCAGC 3 cut(s) 21, 586, 934
BccI CCATC 3 cut(s) 511, 731, 929
BceAI ACGGC 2 cut(s) 424, 890
BciT130I CCWGG 4 cut(s) 239, 338, 452, 785
BclI TGATCA 1 cut(s) 769
BcnI CCSGG 3 cut(s) 58, 446, 475
BcoDI GTCTC 2 cut(s) 116, 902
BfaI CTAG 1 cut(s) 11
BfmI CTRYAG 1 cut(s) 920
BisI GCNGC 6 cut(s) 35, 210, 298, 354, 600, 923
BlsI GCNGC 6 cut(s) 36, 211, 299, 355, 601, 924
Bme1390I CCNGG 7 cut(s) 58, 239, 338, 446, 452, 475, 785
Bme18I GGWCC 4 cut(s) 61, 112, 448, 715
BmeT110I CYCGRG 2 cut(s) 371, 527
BmgBI CACGTC 1 cut(s) 228
BmgT120I GGNCC 7 cut(s) 61, 112, 169, 170, 448, 715, 876
BmiI GGNNCC 7 cut(s) 62, 113, 114, 171, 301, 717, 940
BmrFI CCNGG 7 cut(s) 58, 239, 338, 446, 452, 475, 785
BpuEI CTTGAG 3 cut(s) 563, 668, 884
BpuMI CCSGG 3 cut(s) 58, 446, 475
BsaI GGTCTC 1 cut(s) 116
BsaJI CCNNGG 7 cut(s) 57, 183, 199, 213, 354, 462, 711
BsaWI WCCGGW 1 cut(s) 321
Bsc4I CCNNNNNNNGG 8 cut(s) 143, 144, 216, 451, 573, 670, 949, 950
Bse118I RCCGGY 1 cut(s) 321
BseBI CCWGG 4 cut(s) 239, 338, 452, 785
BseDI CCNNGG 7 cut(s) 57, 183, 199, 213, 354, 462, 711
BseGI GGATG 2 cut(s) 195, 723
BseLI CCNNNNNNNGG 8 cut(s) 143, 144, 216, 451, 573, 670, 949, 950
BseMII CTCAG 1 cut(s) 513
BseRI GAGGAG 2 cut(s) 275, 292
BseSI GKGCMC 2 cut(s) 95, 173
BseXI GCAGC 3 cut(s) 21, 586, 934
Bsh1236I CGCG 2 cut(s) 74, 356
Bsh1285I CGRYCG 3 cut(s) 78, 322, 326
BshFI GGCC 8 cut(s) 42, 56, 171, 353, 434, 488, 855, 877
BshTI ACCGGT 1 cut(s) 321
BsiEI CGRYCG 3 cut(s) 78, 322, 326
BsiHKAI GWGCWC 1 cut(s) 95
BsiHKCI CYCGRG 2 cut(s) 371, 527
BsiSI CCGG 4 cut(s) 57, 322, 446, 474
BslFI GGGAC 2 cut(s) 98, 260
BslI CCNNNNNNNGG 8 cut(s) 143, 144, 216, 451, 573, 670, 949, 950
BsmAI GTCTC 2 cut(s) 116, 902
BsmFI GGGAC 2 cut(s) 98, 260
BsnI GGCC 8 cut(s) 42, 56, 171, 353, 434, 488, 855, 877
Bso31I GGTCTC 1 cut(s) 116
BsoBI CYCGRG 2 cut(s) 371, 527
Bsp120I GGGCCC 1 cut(s) 169
Bsp1286I GDGCHC 4 cut(s) 95, 173, 579, 943
Bsp143I GATC 4 cut(s) 81, 480, 625, 769
Bsp19I CCATGG 2 cut(s) 199, 462
BspACI CCGC 9 cut(s) 74, 156, 210, 297, 341, 354, 356, 389, 411
BspANI GGCC 8 cut(s) 42, 56, 171, 353, 434, 488, 855, 877
BspCNI CTCAG 1 cut(s) 512
BspFNI CGCG 2 cut(s) 74, 356
BspLI GGNNCC 7 cut(s) 62, 113, 114, 171, 301, 717, 940
BspMAI CTGCAG 1 cut(s) 924
BspTNI GGTCTC 1 cut(s) 116
BsrFI RCCGGY 1 cut(s) 321
BssAI RCCGGY 1 cut(s) 321
BssECI CCNNGG 7 cut(s) 57, 183, 199, 213, 354, 462, 711
BssMI GATC 4 cut(s) 81, 480, 625, 769
BssT1I CCWWGG 3 cut(s) 199, 462, 711
Bst2UI CCWGG 4 cut(s) 239, 338, 452, 785
Bst4CI ACNGT 3 cut(s) 90, 97, 957
Bst6I CTCTTC 1 cut(s) 293
BstAPI GCANNNNNTGC 1 cut(s) 31
BstC8I GCNNGC 2 cut(s) 792, 853
BstDEI CTNAG 1 cut(s) 499
BstDSI CCRYGG 4 cut(s) 183, 199, 354, 462
BstF5I GGATG 2 cut(s) 195, 723
BstFNI CGCG 2 cut(s) 74, 356
BstKTI GATC 4 cut(s) 84, 483, 628, 772
BstMAI GTCTC 2 cut(s) 116, 902
BstMBI GATC 4 cut(s) 81, 480, 625, 769
BstMCI CGRYCG 3 cut(s) 78, 322, 326
BstMWI GCNNNNNNNGC 3 cut(s) 31, 504, 556
BstNI CCWGG 4 cut(s) 239, 338, 452, 785
BstSCI CCNGG 7 cut(s) 56, 237, 336, 444, 450, 473, 783
BstSFI CTRYAG 1 cut(s) 920
BstSLI GKGCMC 2 cut(s) 95, 173
BstUI CGCG 2 cut(s) 74, 356
BstV1I GCAGC 3 cut(s) 21, 586, 934
BsuRI GGCC 8 cut(s) 42, 56, 171, 353, 434, 488, 855, 877
BtgI CCRYGG 4 cut(s) 183, 199, 354, 462
BtrI CACGTC 1 cut(s) 228
BtsCI GGATG 2 cut(s) 195, 723
Cac8I GCNNGC 2 cut(s) 792, 853
Cfr10I RCCGGY 1 cut(s) 321
Cfr13I GGNCC 7 cut(s) 61, 112, 169, 170, 448, 715, 876
Cfr42I CCGCGG 1 cut(s) 357
CseI GACGC 1 cut(s) 518
CsiI ACCWGGT 1 cut(s) 450
Csp6I GTAC 1 cut(s) 442
CspAI ACCGGT 1 cut(s) 321
CviAII CATG 5 cut(s) 38, 200, 463, 490, 802
CviQI GTAC 1 cut(s) 442
DdeI CTNAG 1 cut(s) 499
DpnI GATC 4 cut(s) 83, 482, 627, 771
DpnII GATC 4 cut(s) 81, 480, 625, 769
EaeI YGGCCR 4 cut(s) 54, 351, 432, 486
Eam1104I CTCTTC 1 cut(s) 293
EarI CTCTTC 1 cut(s) 293
EciI GGCGGA 2 cut(s) 356, 426
Eco130I CCWWGG 3 cut(s) 199, 462, 711
Eco24I GRGCYC 3 cut(s) 173, 579, 943
Eco31I GGTCTC 1 cut(s) 116
Eco47I GGWCC 4 cut(s) 61, 112, 448, 715
Eco57I CTGAAG 1 cut(s) 5
Eco88I CYCGRG 2 cut(s) 371, 527
EcoO109I RGGNCCY 2 cut(s) 112, 715
EcoRII CCWGG 4 cut(s) 237, 336, 450, 783
EcoT14I CCWWGG 3 cut(s) 199, 462, 711
EcoT38I GRGCYC 3 cut(s) 173, 579, 943
ErhI CCWWGG 3 cut(s) 199, 462, 711
FaeI CATG 5 cut(s) 41, 203, 466, 493, 805
FaqI GGGAC 2 cut(s) 98, 260
FatI CATG 5 cut(s) 37, 199, 462, 489, 801
FauI CCCGC 2 cut(s) 163, 349
FbaI TGATCA 1 cut(s) 769
Fnu4HI GCNGC 6 cut(s) 35, 210, 298, 354, 600, 923
FokI GGATG 2 cut(s) 182, 710
FriOI GRGCYC 3 cut(s) 173, 579, 943
Fsp4HI GCNGC 6 cut(s) 35, 210, 298, 354, 600, 923
FspBI CTAG 1 cut(s) 11
GluI GCNGC 6 cut(s) 35, 210, 298, 354, 600, 923
HaeIII GGCC 8 cut(s) 42, 56, 171, 353, 434, 488, 855, 877
HapII CCGG 4 cut(s) 57, 322, 446, 474
HgaI GACGC 1 cut(s) 518
Hin1II CATG 5 cut(s) 41, 203, 466, 493, 805
HindIII AAGCTT 1 cut(s) 693
HinfI GANTC 1 cut(s) 458
HpaII CCGG 4 cut(s) 57, 322, 446, 474
HphI GGTGA 4 cut(s) 16, 652, 664, 773
Hpy166II GTNNAC 4 cut(s) 7, 93, 660, 886
Hpy188I TCNGA 3 cut(s) 65, 547, 774
Hpy188III TCNNGA 3 cut(s) 79, 115, 623
Hpy8I GTNNAC 4 cut(s) 7, 93, 660, 886
Hpy99I CGWCG 4 cut(s) 512, 541, 544, 547
HpyAV CCTTC 5 cut(s) 136, 565, 664, 830, 841
HpyCH4III ACNGT 3 cut(s) 90, 97, 957
HpyCH4IV ACGT 1 cut(s) 227
HpyCH4V TGCA 5 cut(s) 37, 93, 811, 827, 922
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 504, 556
HpyF3I CTNAG 1 cut(s) 499
HpySE526I ACGT 1 cut(s) 227
Hsp92II CATG 5 cut(s) 41, 203, 466, 493, 805
KflI GGGWCCC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 769
KspI CCGCGG 1 cut(s) 357
Kzo9I GATC 4 cut(s) 81, 480, 625, 769
LmnI GCTCC 5 cut(s) 305, 547, 569, 787, 938
Lsp1109I GCAGC 3 cut(s) 21, 586, 934
MabI ACCWGGT 1 cut(s) 450
MaeI CTAG 1 cut(s) 11
MaeII ACGT 1 cut(s) 227
MaeIII GTNAC 2 cut(s) 223, 404
MalI GATC 4 cut(s) 83, 482, 627, 771
MboI GATC 4 cut(s) 81, 480, 625, 769
MboII GAAGA 4 cut(s) 280, 283, 941, 944
MhlI GDGCHC 4 cut(s) 95, 173, 579, 943
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 3 cut(s) 103, 731, 812
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 2 cut(s) 88, 525
MnlI CCTC 9 cut(s) 137, 208, 293, 296, 313, 357, 375, 516, 643
Mox20I TGGCCA 1 cut(s) 488
MscI TGGCCA 1 cut(s) 488
MseI TTAA 1 cut(s) 426
MslI CAYNNNNRTG 3 cut(s) 98, 467, 806
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 356
MspI CCGG 4 cut(s) 57, 322, 446, 474
MspR9I CCNGG 7 cut(s) 58, 239, 338, 446, 452, 475, 785
MvaI CCWGG 4 cut(s) 239, 338, 452, 785
MvnI CGCG 2 cut(s) 74, 356
MwoI GCNNNNNNNGC 3 cut(s) 31, 504, 556
NciI CCSGG 3 cut(s) 58, 446, 475
NcoI CCATGG 2 cut(s) 199, 462
NdeII GATC 4 cut(s) 81, 480, 625, 769
NlaIII CATG 5 cut(s) 41, 203, 466, 493, 805
NlaIV GGNNCC 7 cut(s) 62, 113, 114, 171, 301, 717, 940
NmeAIII GCCGAG 2 cut(s) 238, 460
NmuCI GTSAC 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 173
PinAI ACCGGT 1 cut(s) 321
PkrI GCNGC 6 cut(s) 36, 211, 299, 355, 601, 924
PleI GAGTC 1 cut(s) 466
PpsI GAGTC 1 cut(s) 466
PpuMI RGGWCCY 2 cut(s) 112, 715
Psp5II RGGWCCY 2 cut(s) 112, 715
Psp6I CCWGG 4 cut(s) 237, 336, 450, 783
PspGI CCWGG 4 cut(s) 237, 336, 450, 783
PspN4I GGNNCC 7 cut(s) 62, 113, 114, 171, 301, 717, 940
PspOMI GGGCCC 1 cut(s) 169
PspPI GGNCC 7 cut(s) 61, 112, 169, 170, 448, 715, 876
PspPPI RGGWCCY 2 cut(s) 112, 715
PstI CTGCAG 1 cut(s) 924
RsaI GTAC 1 cut(s) 443
RsaNI GTAC 1 cut(s) 442
RseI CAYNNNNRTG 3 cut(s) 98, 467, 806
SacII CCGCGG 1 cut(s) 357
SaqAI TTAA 1 cut(s) 426
SatI GCNGC 6 cut(s) 35, 210, 298, 354, 600, 923
Sau3AI GATC 4 cut(s) 81, 480, 625, 769
Sau96I GGNCC 7 cut(s) 61, 112, 169, 170, 448, 715, 876
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 7 cut(s) 58, 239, 338, 446, 452, 475, 785
SduI GDGCHC 4 cut(s) 95, 173, 579, 943
SexAI ACCWGGT 1 cut(s) 450
SfcI CTRYAG 1 cut(s) 920
Sfr303I CCGCGG 1 cut(s) 357
SgrBI CCGCGG 1 cut(s) 357
SinI GGWCC 4 cut(s) 61, 112, 448, 715
SmiMI CAYNNNNRTG 3 cut(s) 98, 467, 806
SmlI CTYRAG 3 cut(s) 578, 647, 899
SmoI CTYRAG 3 cut(s) 578, 647, 899
Sse9I AATT 3 cut(s) 103, 731, 812
SsiI CCGC 9 cut(s) 74, 156, 210, 297, 341, 354, 356, 389, 411
SspMI CTAG 1 cut(s) 11
StyD4I CCNGG 7 cut(s) 56, 237, 336, 444, 450, 473, 783
StyI CCWWGG 3 cut(s) 199, 462, 711
TaaI ACNGT 3 cut(s) 90, 97, 957
TaiI ACGT 1 cut(s) 230
TaqI TCGA 3 cut(s) 78, 84, 479
TasI AATT 3 cut(s) 103, 731, 812
TauI GCSGC 3 cut(s) 212, 300, 356
Tru1I TTAA 1 cut(s) 426
Tru9I TTAA 1 cut(s) 426
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 3 cut(s) 34, 599, 922
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 4 cut(s) 62, 116, 818, 854
TspGWI ACGGA 2 cut(s) 256, 556
VneI GTGCAC 1 cut(s) 91
VpaK11BI GGWCC 4 cut(s) 61, 112, 448, 715
XapI RAATTY 2 cut(s) 103, 731
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.