pycom15g23290

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
17340479 .. 17340724
246 bp
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UTR
Exon/CDS
Intron
pycom15g23290.1

Sequence Viewer

Length: 246 bp
ATGAACGCCGCACTCTTAACAGAGGAGCTTGGTGTGGCGGTTCTGTCTAAGATTCCACTGTGGAAGAAAGTGGTGGAGAGGGAGGAGATAGAGGAAATGGTGAGAAAGATCATGGTGGACGAAGAAGGTTTTGCATTGAGAGATAGAGTGAAGAAGATGAAAGCAAGTGGTGCAAAATCTTTGGAAAAGAGAGGTTCGTCTTATAATGCCCTCTCTCAATTCGCAAAGCACAGTGAATTTAAGTGA

Protein Analysis

82

Amino Acids

9.21

Weight (kDa)

9.3

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018541)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AciI CCGC 2 cut(s) 9, 38
AcsI RAATTY 1 cut(s) 236
AluBI AGCT 1 cut(s) 28
AluI AGCT 1 cut(s) 28
ApoI RAATTY 1 cut(s) 236
AsuHPI GGTGA 1 cut(s) 112
BisI GCNGC 1 cut(s) 9
BlsI GCNGC 1 cut(s) 10
BseRI GAGGAG 2 cut(s) 38, 98
Bsp143I GATC 1 cut(s) 108
BspACI CCGC 2 cut(s) 9, 38
BssMI GATC 1 cut(s) 108
Bst4CI ACNGT 2 cut(s) 60, 233
BstAPI GCANNNNNTGC 1 cut(s) 170
BstDEI CTNAG 1 cut(s) 48
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
BstMWI GCNNNNNNNGC 1 cut(s) 170
BtsIMutI CAGTG 2 cut(s) 56, 238
CviAII CATG 1 cut(s) 112
CviJI RGCY 1 cut(s) 28
CviKI_1 RGCY 1 cut(s) 28
DdeI CTNAG 1 cut(s) 48
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
FaeI CATG 1 cut(s) 115
FaiI YATR 2 cut(s) 113, 204
FatI CATG 1 cut(s) 111
Fnu4HI GCNGC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 9
GluI GCNGC 1 cut(s) 9
Hin1II CATG 1 cut(s) 115
HinfI GANTC 1 cut(s) 52
HphI GGTGA 1 cut(s) 112
Hpy166II GTNNAC 1 cut(s) 118
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 2 cut(s) 60, 233
HpyCH4V TGCA 2 cut(s) 134, 173
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
HpyF3I CTNAG 1 cut(s) 48
Hsp92II CATG 1 cut(s) 115
Kzo9I GATC 1 cut(s) 108
LmnI GCTCC 1 cut(s) 25
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 4 cut(s) 76, 134, 163, 166
MluCI AATT 2 cut(s) 218, 236
MnlI CCTC 6 cut(s) 16, 72, 76, 85, 185, 221
MseI TTAA 2 cut(s) 17, 240
MwoI GCNNNNNNNGC 1 cut(s) 170
NdeII GATC 1 cut(s) 108
NlaIII CATG 1 cut(s) 115
PfeI GAWTC 1 cut(s) 52
PkrI GCNGC 1 cut(s) 10
PsiI TTATAA 1 cut(s) 204
SaqAI TTAA 2 cut(s) 17, 240
SatI GCNGC 1 cut(s) 9
Sau3AI GATC 1 cut(s) 108
SetI ASST 3 cut(s) 30, 130, 196
SgeI CNNG 3 cut(s) 41, 124, 177
Sse9I AATT 2 cut(s) 218, 236
SsiI CCGC 2 cut(s) 9, 38
TaaI ACNGT 2 cut(s) 60, 233
TasI AATT 2 cut(s) 218, 236
TauI GCSGC 1 cut(s) 11
TfiI GAWTC 1 cut(s) 52
Tru1I TTAA 2 cut(s) 17, 240
Tru9I TTAA 2 cut(s) 17, 240
TscAI CASTG 2 cut(s) 63, 238
TspDTI ATGAA 2 cut(s) 17, 173
TspRI CASTG 2 cut(s) 63, 238
XapI RAATTY 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.