Rh2BG162100

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
14065964 .. 14086107
20144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG162100.1

Sequence Viewer

Length: 567 bp
ATGAATGCCACGTTGTTGACTGAGGAGCTTGGCGTGGCGGTCAGGTCAGAGGTGCCACCGTGGAAGAAAGTGGTGGGCAGGGAGGAGATAGAGAGGATGGTGAGGAAGATAATGGTGGAGAAAGATGGGTTTGAAATAAGAGGTAGGGTGAAAGAGCTAAAACAAAGTGGAGAAAAGGCTTCGAGGGAAGGTGGTTCGTCGTATAATGACTTGTTTCAAGTGGAAAAGTCTCAAGTATCTTCCTGCTATATGTGCTGTATTGTCAGTTTTCTTCAATGTAGGCACAGAGTATCCTCTACTCAATCTGAAGACTTGTCTATTACTTCTACTACTTCAAGTACCGAGGTTGGAGAATTAAAGGGAAATGCACTCGGGCTTGAACACCATTTACACGGTGGACGTGCATTAGCTGCTTTTAATCATTTTCTTGGTTTTAGAGTTCAAAAATTGAAATCACAAGGAAAAGGACAAATACAAGCAAATGTTCAAGCAGATGTTCAAACACTTCTTGGACCTATGACAGAAAGAGAAGAGTCTCTTCATTCATCAGTAAGTTTTATTGTCTAG

Protein Analysis

188

Amino Acids

20.84

Weight (kDa)

7.72

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018541)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 52
AciI CCGC 1 cut(s) 38
AcuI CTGAAG 1 cut(s) 327
AfaI GTAC 1 cut(s) 340
AgsI TTSAA 9 cut(s) 134, 218, 275, 336, 380, 443, 451, 488, 500
AjiI CACGTC 1 cut(s) 401
AluBI AGCT 3 cut(s) 28, 157, 410
AluI AGCT 3 cut(s) 28, 157, 410
Alw26I GTCTC 2 cut(s) 234, 540
Ama87I CYCGRG 1 cut(s) 371
ApeKI GCWGC 1 cut(s) 410
AspS9I GGNCC 1 cut(s) 512
AsuHPI GGTGA 2 cut(s) 112, 160
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 1 cut(s) 512
BanI GGYRCC 1 cut(s) 52
BbsI GAAGAC 1 cut(s) 315
BbvI GCAGC 1 cut(s) 397
BccI CCATC 2 cut(s) 91, 119
BciVI GTATCC 1 cut(s) 301
BcoDI GTCTC 2 cut(s) 234, 540
BfaI CTAG 1 cut(s) 565
BfuI GTATCC 1 cut(s) 301
BisI GCNGC 1 cut(s) 411
BlsI GCNGC 1 cut(s) 412
Bme18I GGWCC 1 cut(s) 512
BmeT110I CYCGRG 1 cut(s) 371
BmgBI CACGTC 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 512
BmiI GGNNCC 1 cut(s) 54
BpiI GAAGAC 1 cut(s) 315
BpuEI CTTGAG 1 cut(s) 216
BsaJI CCNNGG 2 cut(s) 59, 342
BseDI CCNNGG 2 cut(s) 59, 342
BseGI GGATG 1 cut(s) 102
BseMII CTCAG 1 cut(s) 12
BseRI GAGGAG 2 cut(s) 38, 98
BseXI GCAGC 1 cut(s) 397
BshNI GGYRCC 1 cut(s) 52
BsiHKCI CYCGRG 1 cut(s) 371
BsmAI GTCTC 2 cut(s) 234, 540
BsmI GAATGC 1 cut(s) 10
BsoBI CYCGRG 1 cut(s) 371
BspACI CCGC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 13
BspLI GGNNCC 1 cut(s) 54
BspT107I GGYRCC 1 cut(s) 52
BssECI CCNNGG 2 cut(s) 59, 342
Bst4CI ACNGT 2 cut(s) 60, 395
Bst6I CTCTTC 2 cut(s) 525, 543
BstAPI GCANNNNNTGC 1 cut(s) 410
BstDEI CTNAG 1 cut(s) 21
BstDSI CCRYGG 1 cut(s) 59
BstF5I GGATG 1 cut(s) 102
BstMAI GTCTC 2 cut(s) 234, 540
BstMWI GCNNNNNNNGC 2 cut(s) 252, 410
BstV1I GCAGC 1 cut(s) 397
BstV2I GAAGAC 1 cut(s) 315
BsuI GTATCC 1 cut(s) 301
BtgI CCRYGG 1 cut(s) 59
BtrI CACGTC 1 cut(s) 401
BtsCI GGATG 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 512
Csp6I GTAC 1 cut(s) 339
CviJI RGCY 5 cut(s) 28, 157, 179, 376, 410
CviKI_1 RGCY 5 cut(s) 28, 157, 179, 376, 410
CviQI GTAC 1 cut(s) 339
DdeI CTNAG 1 cut(s) 21
Eam1104I CTCTTC 2 cut(s) 525, 543
EarI CTCTTC 2 cut(s) 525, 543
Eco47I GGWCC 1 cut(s) 512
Eco57I CTGAAG 1 cut(s) 327
Eco88I CYCGRG 1 cut(s) 371
FaiI YATR 4 cut(s) 204, 249, 251, 518
FalI AAGNNNNNCTT 2 cut(s) 522, 554
Fnu4HI GCNGC 1 cut(s) 411
FokI GGATG 1 cut(s) 109
Fsp4HI GCNGC 1 cut(s) 411
FspBI CTAG 1 cut(s) 565
GluI GCNGC 1 cut(s) 411
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HinfI GANTC 1 cut(s) 533
HphI GGTGA 2 cut(s) 112, 160
Hpy166II GTNNAC 2 cut(s) 18, 398
Hpy188I TCNGA 2 cut(s) 49, 307
Hpy8I GTNNAC 2 cut(s) 18, 398
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 1 cut(s) 182
HpyCH4III ACNGT 2 cut(s) 60, 395
HpyCH4IV ACGT 2 cut(s) 11, 400
HpyCH4V TGCA 2 cut(s) 368, 404
HpyF10VI GCNNNNNNNGC 2 cut(s) 252, 410
HpyF3I CTNAG 1 cut(s) 21
HpySE526I ACGT 2 cut(s) 11, 400
LmnI GCTCC 1 cut(s) 25
LpnPI CCDG 3 cut(s) 28, 64, 256
Lsp1109I GCAGC 1 cut(s) 397
MaeI CTAG 1 cut(s) 565
MaeII ACGT 2 cut(s) 11, 400
MboII GAAGA 7 cut(s) 76, 118, 231, 263, 320, 530, 542
MluCI AATT 2 cut(s) 353, 446
MlyI GAGTC 1 cut(s) 542
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 9 cut(s) 16, 43, 76, 87, 96, 134, 177, 304, 337
MseI TTAA 2 cut(s) 356, 417
Mva1269I GAATGC 1 cut(s) 10
MwoI GCNNNNNNNGC 2 cut(s) 252, 410
NlaIV GGNNCC 1 cut(s) 54
PctI GAATGC 1 cut(s) 10
PkrI GCNGC 1 cut(s) 412
PleI GAGTC 1 cut(s) 541
PpsI GAGTC 1 cut(s) 541
PspN4I GGNNCC 1 cut(s) 54
PspPI GGNCC 1 cut(s) 512
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
RsaI GTAC 1 cut(s) 340
RsaNI GTAC 1 cut(s) 339
SaqAI TTAA 2 cut(s) 356, 417
SatI GCNGC 1 cut(s) 411
Sau96I GGNCC 1 cut(s) 512
SchI GAGTC 1 cut(s) 542
SinI GGWCC 1 cut(s) 512
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
Sse9I AATT 2 cut(s) 353, 446
SsiI CCGC 1 cut(s) 38
SspMI CTAG 1 cut(s) 565
TaaI ACNGT 2 cut(s) 60, 395
TaiI ACGT 2 cut(s) 14, 403
TaqI TCGA 1 cut(s) 182
TasI AATT 2 cut(s) 353, 446
Tru1I TTAA 2 cut(s) 356, 417
Tru9I TTAA 2 cut(s) 356, 417
TseI GCWGC 1 cut(s) 410
TspDTI ATGAA 3 cut(s) 17, 530, 534
VpaK11BI GGWCC 1 cut(s) 512
XcmI CCANNNNNNNNNTGG 1 cut(s) 392
XspI CTAG 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.