Rh2BG161300

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
13925630 .. 13937124
11495 bp
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UTR
Exon/CDS
Intron
Rh2BG161300.1

Sequence Viewer

Length: 294 bp
ATGGTGAGGAAAATTATGGAGGGAGAAGAAGGTTTTGCATTGAGAGATAGAGCCAAGAATCTTAAATTCAGTGGTGTAAAAGCTTTGGAACAAGGTGGTTCGTCTTATGATGCTCTTTCTCTGTTCACTAAACATGCTGACATGTTCGTGCAATTTGCAAATGGTGTTGATCCTTCTTCCCAAGTTCCGGGTGATGTAGTGCATAGGGGGGTAACTCAATTTAATCATTTGGCATTTCGAGGAGTCTCTCTGATAACGAGGAAGACTTTGAATCTGGACATCACAGAGGATTAG

Protein Analysis

97

Amino Acids

10.71

Weight (kDa)

6.83

Isoelectric Point (pI)

21.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018541)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 164
AcsI RAATTY 1 cut(s) 65
AfiI CCNNNNNNNGG 1 cut(s) 187
AflIII ACRYGT 1 cut(s) 141
AgsI TTSAA 1 cut(s) 271
AluBI AGCT 1 cut(s) 83
AluI AGCT 1 cut(s) 83
Alw26I GTCTC 1 cut(s) 250
AlwI GGATC 1 cut(s) 164
ApoI RAATTY 1 cut(s) 65
AsuC2I CCSGG 1 cut(s) 189
AsuHPI GGTGA 2 cut(s) 16, 203
BbsI GAAGAC 1 cut(s) 269
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 250
Bme1390I CCNGG 1 cut(s) 189
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 1 cut(s) 100
BpiI GAAGAC 1 cut(s) 269
BpuMI CCSGG 1 cut(s) 189
Bsc4I CCNNNNNNNGG 1 cut(s) 187
BseLI CCNNNNNNNGG 1 cut(s) 187
BseRI GAGGAG 1 cut(s) 255
BsiSI CCGG 1 cut(s) 188
BslI CCNNNNNNNGG 1 cut(s) 187
BsmAI GTCTC 1 cut(s) 250
Bsp143I GATC 1 cut(s) 169
BspPI GGATC 1 cut(s) 164
BssMI GATC 1 cut(s) 169
BstKTI GATC 1 cut(s) 172
BstMAI GTCTC 1 cut(s) 250
BstMBI GATC 1 cut(s) 169
BstNSI RCATGY 2 cut(s) 137, 145
BstSCI CCNGG 1 cut(s) 187
BstV2I GAAGAC 1 cut(s) 269
BtsIMutI CAGTG 1 cut(s) 76
CviAII CATG 2 cut(s) 134, 142
CviJI RGCY 2 cut(s) 53, 83
CviKI_1 RGCY 2 cut(s) 53, 83
DpnI GATC 1 cut(s) 171
DpnII GATC 1 cut(s) 169
FaeI CATG 2 cut(s) 137, 145
FaiI YATR 5 cut(s) 17, 108, 135, 143, 204
FatI CATG 2 cut(s) 133, 141
HapII CCGG 1 cut(s) 188
Hin1II CATG 2 cut(s) 137, 145
HindIII AAGCTT 1 cut(s) 81
HinfI GANTC 3 cut(s) 58, 243, 271
HpaII CCGG 1 cut(s) 188
HphI GGTGA 2 cut(s) 16, 203
Hpy166II GTNNAC 1 cut(s) 126
Hpy188I TCNGA 1 cut(s) 252
Hpy188III TCNNGA 1 cut(s) 275
Hpy8I GTNNAC 1 cut(s) 126
HpyAV CCTTC 2 cut(s) 23, 183
HpyCH4V TGCA 4 cut(s) 38, 151, 158, 202
Hsp92II CATG 2 cut(s) 137, 145
Kzo9I GATC 1 cut(s) 169
LpnPI CCDG 2 cut(s) 201, 260
LweI GCATC 1 cut(s) 100
MaeIII GTNAC 1 cut(s) 211
MalI GATC 1 cut(s) 171
MboI GATC 1 cut(s) 169
MboII GAAGA 3 cut(s) 38, 168, 274
MluCI AATT 4 cut(s) 12, 65, 152, 218
MlyI GAGTC 1 cut(s) 252
MnlI CCTC 4 cut(s) 13, 233, 252, 280
MseI TTAA 2 cut(s) 63, 222
MslI CAYNNNNRTG 1 cut(s) 146
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 1 cut(s) 189
NciI CCSGG 1 cut(s) 189
NdeII GATC 1 cut(s) 169
NlaIII CATG 2 cut(s) 137, 145
NspI RCATGY 2 cut(s) 137, 145
PciI ACATGT 1 cut(s) 141
PfeI GAWTC 2 cut(s) 58, 271
PleI GAGTC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 251
PscI ACATGT 1 cut(s) 141
RseI CAYNNNNRTG 1 cut(s) 146
SaqAI TTAA 2 cut(s) 63, 222
Sau3AI GATC 1 cut(s) 169
SchI GAGTC 1 cut(s) 252
ScrFI CCNGG 1 cut(s) 189
SetI ASST 3 cut(s) 34, 85, 97
SfaNI GCATC 1 cut(s) 100
SmiMI CAYNNNNRTG 1 cut(s) 146
Sse9I AATT 4 cut(s) 12, 65, 152, 218
StyD4I CCNGG 1 cut(s) 187
TaqI TCGA 1 cut(s) 238
TasI AATT 4 cut(s) 12, 65, 152, 218
TfiI GAWTC 2 cut(s) 58, 271
Tru1I TTAA 2 cut(s) 63, 222
Tru9I TTAA 2 cut(s) 63, 222
TscAI CASTG 1 cut(s) 76
TspRI CASTG 1 cut(s) 76
XapI RAATTY 1 cut(s) 65
XceI RCATGY 2 cut(s) 137, 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.