Rh2DG160300

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
13632083 .. 13632322
240 bp
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UTR
Exon/CDS
Intron
Rh2DG160300.1

Sequence Viewer

Length: 240 bp
ATGAGCGCCACGTTGCTGACGGAGGAGCTTGGCGTGGCAGTTCGGTCGAGGAAACCGCCGTGGGAGAGGGTGGTTGAGAGGGAAGAGATTAAGGAGATGGTGAGAAAGATAATCGATATCATAGGGTTTGCTATGAGAGAAAGAGCCCATAATCTAAAATCAAGCGGTATAGAAGCTTTAGGAAAAGGTGGTTCATCATATAAGGTTCTTTCTCAATTAGCAAAACCGAATGAACAATGA

Protein Analysis

79

Amino Acids

8.86

Weight (kDa)

9.52

Isoelectric Point (pI)

47.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018541)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 56, 165
AluBI AGCT 2 cut(s) 28, 176
AluI AGCT 2 cut(s) 28, 176
AspLEI GCGC 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 112
BanII GRGCYC 1 cut(s) 148
BccI CCATC 1 cut(s) 91
BceAI ACGGC 1 cut(s) 43
BcgI CGANNNNNNTGC 2 cut(s) 27, 61
BfoI RGCGCY 1 cut(s) 9
Bsa29I ATCGAT 1 cut(s) 114
BsaJI CCNNGG 1 cut(s) 59
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 1 cut(s) 59
BseRI GAGGAG 1 cut(s) 38
Bsh1285I CGRYCG 1 cut(s) 47
BshVI ATCGAT 1 cut(s) 114
BsiEI CGRYCG 1 cut(s) 47
Bsp1286I GDGCHC 1 cut(s) 148
BspACI CCGC 2 cut(s) 56, 165
BspDI ATCGAT 1 cut(s) 114
BssECI CCNNGG 1 cut(s) 59
Bst6I CTCTTC 1 cut(s) 78
BstDSI CCRYGG 1 cut(s) 59
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 1 cut(s) 8
BstMCI CGRYCG 1 cut(s) 47
Bsu15I ATCGAT 1 cut(s) 114
BsuTUI ATCGAT 1 cut(s) 114
BtgI CCRYGG 1 cut(s) 59
CfoI GCGC 1 cut(s) 8
ClaI ATCGAT 1 cut(s) 114
CviJI RGCY 3 cut(s) 28, 146, 176
CviKI_1 RGCY 3 cut(s) 28, 146, 176
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
Eco24I GRGCYC 1 cut(s) 148
Eco32I GATATC 1 cut(s) 118
EcoRV GATATC 1 cut(s) 118
EcoT38I GRGCYC 1 cut(s) 148
FaiI YATR 6 cut(s) 122, 134, 150, 170, 199, 201
FriOI GRGCYC 1 cut(s) 148
GlaI GCGC 1 cut(s) 7
HaeII RGCGCY 1 cut(s) 9
HhaI GCGC 1 cut(s) 8
Hin6I GCGC 1 cut(s) 6
HinP1I GCGC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 174
HphI GGTGA 1 cut(s) 112
HpyCH4IV ACGT 1 cut(s) 11
HpySE526I ACGT 1 cut(s) 11
HspAI GCGC 1 cut(s) 6
LmnI GCTCC 1 cut(s) 25
MaeII ACGT 1 cut(s) 11
MboII GAAGA 1 cut(s) 95
MhlI GDGCHC 1 cut(s) 148
MluCI AATT 1 cut(s) 215
MnlI CCTC 4 cut(s) 16, 42, 60, 72
MseI TTAA 1 cut(s) 90
SaqAI TTAA 1 cut(s) 90
SduI GDGCHC 1 cut(s) 148
SetI ASST 5 cut(s) 14, 30, 178, 190, 207
SgeI CNNG 6 cut(s) 22, 41, 46, 60, 72, 174
Sse9I AATT 1 cut(s) 215
SsiI CCGC 2 cut(s) 56, 165
TaiI ACGT 1 cut(s) 14
TaqI TCGA 2 cut(s) 47, 114
TaqII GACCGA 1 cut(s) 33
TasI AATT 1 cut(s) 215
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TspDTI ATGAA 1 cut(s) 183
TspGWI ACGGA 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.