Cold acclimation protein WCOR413
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g14181 FvH4_1g14252 |
| malus_domestica | MD15G1270400.v1.1 |
| prunus_persica | Prupe.7G147700_v2.0.a1 |
| pyrus_communis | pycom15g23460 |
| rosa_chinensis | RchiOBHm_Chr2g0102851 |
| rosa_laevigata | RLG00000017184 |
| rosa_multiflora | Rmu_sc0000388.1_g000049 |
| rosa_roxburghii | Rroxscaffold_2G00140250 |
| rosa_rugosa | Rorug02G0110100 |
| rosa_samantha | Rh2AG158500 Rh2AG434100 Rh2BG164900 Rh2CG164600 Rh2CG419800 Rh2DG163700 |
| rosa_wichuraiana | Rw2G012330 Rw2G012380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 108 |
| AclI | AACGTT | 1 cut(s) | 401 |
| AcsI | RAATTY | 2 cut(s) | 60, 366 |
| AfaI | GTAC | 3 cut(s) | 21, 26, 512 |
| AflIII | ACRYGT | 1 cut(s) | 461 |
| AgsI | TTSAA | 2 cut(s) | 58, 582 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 386, 418 |
| AluBI | AGCT | 3 cut(s) | 39, 101, 470 |
| AluI | AGCT | 3 cut(s) | 39, 101, 470 |
| AoxI | GGCC | 1 cut(s) | 451 |
| ApeKI | GCWGC | 1 cut(s) | 210 |
| ApoI | RAATTY | 2 cut(s) | 60, 366 |
| AspLEI | GCGC | 1 cut(s) | 548 |
| AsuHPI | GGTGA | 2 cut(s) | 433, 530 |
| AsuII | TTCGAA | 1 cut(s) | 405 |
| BbvI | GCAGC | 1 cut(s) | 197 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BfmI | CTRYAG | 1 cut(s) | 498 |
| BisI | GCNGC | 2 cut(s) | 108, 211 |
| BlsI | GCNGC | 2 cut(s) | 109, 212 |
| BmsI | GCATC | 2 cut(s) | 222, 533 |
| Bpu10I | CCTNAGC | 1 cut(s) | 448 |
| Bpu14I | TTCGAA | 1 cut(s) | 405 |
| Bse1I | ACTGG | 1 cut(s) | 137 |
| Bse3DI | GCAATG | 1 cut(s) | 298 |
| BseMI | GCAATG | 1 cut(s) | 298 |
| BseMII | CTCAG | 2 cut(s) | 375, 462 |
| BseNI | ACTGG | 1 cut(s) | 137 |
| BseXI | GCAGC | 1 cut(s) | 197 |
| BshFI | GGCC | 1 cut(s) | 453 |
| BsnI | GGCC | 1 cut(s) | 453 |
| Bsp119I | TTCGAA | 1 cut(s) | 405 |
| Bsp1407I | TGTACA | 1 cut(s) | 510 |
| Bsp143I | GATC | 1 cut(s) | 570 |
| BspACI | CCGC | 1 cut(s) | 108 |
| BspANI | GGCC | 1 cut(s) | 453 |
| BspCNI | CTCAG | 2 cut(s) | 374, 461 |
| BspMAI | CTGCAG | 1 cut(s) | 502 |
| BspT104I | TTCGAA | 1 cut(s) | 405 |
| BsrDI | GCAATG | 1 cut(s) | 298 |
| BsrGI | TGTACA | 1 cut(s) | 510 |
| BsrI | ACTGG | 1 cut(s) | 137 |
| BssMI | GATC | 1 cut(s) | 570 |
| Bst4CI | ACNGT | 4 cut(s) | 24, 49, 200, 284 |
| Bst6I | CTCTTC | 1 cut(s) | 122 |
| BstAUI | TGTACA | 1 cut(s) | 510 |
| BstBI | TTCGAA | 1 cut(s) | 405 |
| BstDEI | CTNAG | 3 cut(s) | 361, 448, 539 |
| BstHHI | GCGC | 1 cut(s) | 548 |
| BstKTI | GATC | 1 cut(s) | 573 |
| BstMBI | GATC | 1 cut(s) | 570 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 107 |
| BstNSI | RCATGY | 1 cut(s) | 465 |
| BstSFI | CTRYAG | 1 cut(s) | 498 |
| BstV1I | GCAGC | 1 cut(s) | 197 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 418 |
| BsuRI | GGCC | 1 cut(s) | 453 |
| CfoI | GCGC | 1 cut(s) | 548 |
| Csp6I | GTAC | 3 cut(s) | 20, 25, 511 |
| CviAII | CATG | 1 cut(s) | 462 |
| CviJI | RGCY | 5 cut(s) | 39, 101, 210, 453, 470 |
| CviKI_1 | RGCY | 5 cut(s) | 39, 101, 210, 453, 470 |
| CviQI | GTAC | 3 cut(s) | 20, 25, 511 |
| DdeI | CTNAG | 3 cut(s) | 361, 448, 539 |
| DpnI | GATC | 1 cut(s) | 572 |
| DpnII | GATC | 1 cut(s) | 570 |
| Eam1104I | CTCTTC | 1 cut(s) | 122 |
| EarI | CTCTTC | 1 cut(s) | 122 |
| Eco147I | AGGCCT | 1 cut(s) | 453 |
| FaeI | CATG | 1 cut(s) | 465 |
| FaiI | YATR | 7 cut(s) | 248, 323, 358, 376, 388, 463, 473 |
| FatI | CATG | 1 cut(s) | 461 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 211 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 211 |
| FspBI | CTAG | 1 cut(s) | 98 |
| GlaI | GCGC | 1 cut(s) | 547 |
| GluI | GCNGC | 2 cut(s) | 108, 211 |
| HaeIII | GGCC | 1 cut(s) | 453 |
| HhaI | GCGC | 1 cut(s) | 548 |
| Hin1II | CATG | 1 cut(s) | 465 |
| Hin6I | GCGC | 1 cut(s) | 546 |
| HinP1I | GCGC | 1 cut(s) | 546 |
| HindIII | AAGCTT | 1 cut(s) | 37 |
| HinfI | GANTC | 3 cut(s) | 256, 264, 525 |
| HphI | GGTGA | 2 cut(s) | 433, 530 |
| Hpy166II | GTNNAC | 2 cut(s) | 33, 554 |
| Hpy188I | TCNGA | 4 cut(s) | 233, 269, 364, 432 |
| Hpy8I | GTNNAC | 2 cut(s) | 33, 554 |
| HpyCH4III | ACNGT | 4 cut(s) | 24, 49, 200, 284 |
| HpyCH4IV | ACGT | 2 cut(s) | 401, 576 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 213, 500 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 107 |
| HpyF3I | CTNAG | 3 cut(s) | 361, 448, 539 |
| HpySE526I | ACGT | 2 cut(s) | 401, 576 |
| Hsp92II | CATG | 1 cut(s) | 465 |
| HspAI | GCGC | 1 cut(s) | 546 |
| Kzo9I | GATC | 1 cut(s) | 570 |
| LmnI | GCTCC | 1 cut(s) | 446 |
| LpnPI | CCDG | 7 cut(s) | 150, 160, 183, 227, 435, 457, 494 |
| Lsp1109I | GCAGC | 1 cut(s) | 197 |
| LweI | GCATC | 2 cut(s) | 222, 533 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MaeII | ACGT | 2 cut(s) | 401, 576 |
| MaeIII | GTNAC | 4 cut(s) | 8, 163, 194, 278 |
| MalI | GATC | 1 cut(s) | 572 |
| MboI | GATC | 1 cut(s) | 570 |
| MboII | GAAGA | 3 cut(s) | 109, 325, 328 |
| MluCI | AATT | 4 cut(s) | 60, 74, 292, 366 |
| MlyI | GAGTC | 1 cut(s) | 519 |
| MnlI | CCTC | 6 cut(s) | 60, 125, 135, 254, 263, 385 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 107 |
| NdeII | GATC | 1 cut(s) | 570 |
| NlaIII | CATG | 1 cut(s) | 465 |
| NmuCI | GTSAC | 2 cut(s) | 163, 194 |
| NspI | RCATGY | 1 cut(s) | 465 |
| NspV | TTCGAA | 1 cut(s) | 405 |
| PceI | AGGCCT | 1 cut(s) | 453 |
| PciI | ACATGT | 1 cut(s) | 461 |
| PfeI | GAWTC | 2 cut(s) | 256, 264 |
| PkrI | GCNGC | 2 cut(s) | 109, 212 |
| PleI | GAGTC | 1 cut(s) | 519 |
| PpsI | GAGTC | 1 cut(s) | 519 |
| PscI | ACATGT | 1 cut(s) | 461 |
| Psp1406I | AACGTT | 1 cut(s) | 401 |
| PstI | CTGCAG | 1 cut(s) | 502 |
| RsaI | GTAC | 3 cut(s) | 21, 26, 512 |
| RsaNI | GTAC | 3 cut(s) | 20, 25, 511 |
| SatI | GCNGC | 2 cut(s) | 108, 211 |
| Sau3AI | GATC | 1 cut(s) | 570 |
| SchI | GAGTC | 1 cut(s) | 519 |
| SetI | ASST | 8 cut(s) | 41, 103, 117, 172, 274, 404, 472, 579 |
| SfaNI | GCATC | 2 cut(s) | 222, 533 |
| SfcI | CTRYAG | 1 cut(s) | 498 |
| SfuI | TTCGAA | 1 cut(s) | 405 |
| Sse9I | AATT | 4 cut(s) | 60, 74, 292, 366 |
| SseBI | AGGCCT | 1 cut(s) | 453 |
| SsiI | CCGC | 1 cut(s) | 108 |
| SspI | AATATT | 1 cut(s) | 348 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StuI | AGGCCT | 1 cut(s) | 453 |
| TaaI | ACNGT | 4 cut(s) | 24, 49, 200, 284 |
| TaiI | ACGT | 2 cut(s) | 404, 579 |
| TaqI | TCGA | 4 cut(s) | 259, 286, 405, 458 |
| TasI | AATT | 4 cut(s) | 60, 74, 292, 366 |
| TatI | WGTACW | 3 cut(s) | 19, 24, 510 |
| TauI | GCSGC | 1 cut(s) | 110 |
| TfiI | GAWTC | 2 cut(s) | 256, 264 |
| TseFI | GTSAC | 2 cut(s) | 163, 194 |
| TseI | GCWGC | 1 cut(s) | 210 |
| Tsp45I | GTSAC | 2 cut(s) | 163, 194 |
| TspDTI | ATGAA | 1 cut(s) | 287 |
| TspGWI | ACGGA | 1 cut(s) | 201 |
| XapI | RAATTY | 2 cut(s) | 60, 366 |
| XceI | RCATGY | 1 cut(s) | 465 |
| XspI | CTAG | 1 cut(s) | 98 |