pycom15g28650

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0010203
Physical Location & Seq
Forward (+)
24707547 .. 24709304
1758 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1758 bp
ATGGCTGCTTTAATTTCATTGACCGGTGAGACTCAGTTCATTCACAGTGTGTGTGCAATTGTAGTAAAGGGTCAGTGGAGCAACCTCTTGAAACCCAACAATGATTCTCTTCTCAGCTCGGCAACCATTCACCAGGTACTACTGCAACTCTCATTCCATGGCTATGGCCTTTCTCCTTCCTGGGCTTTCTTCAAATGGGTCGAATCACTTCCCTCTTGCAAGCACTCCTTGCAATGTTCTTGGACTATGATTCACATCCTCACCAAGCACACGCACTTCAAACCTGCACACCAACTGCTTGAAAAAATTGCCCTTAAGGATTTCTTGTCCTCTCCGTCGGTTTTGAATGCTTTGGTTCGGACCAATGACGATCGTGATGTGAATTCACATGTTTTGAGCTGGCTTGTGATCTTTTATGCTAATTCTAAGATGACCCAAGATGCAATTCAGGTCTTGGAGCTCATGAGGATTCATTTGTTTAAGCCCCATTTGCATGCTTGTACTGCCTTATTGAGTTCTTTGGTTAAAGATAGGATGACTAATATGGTATGGAAAGTTTACAAGAATATGATCAAGGCCGGGGTTGTGCCAAATGTTCATTTGTACAATGTGTTGATTCATGCTTGTTGCAAGTCTGGGGATGTAGAGAAGGCAGAGAGTTTGCTGAGTGAGATGGAATTCAAGTGTGTCTTTCCTGATATTTTCACATATAATACGTTGATATCGCTGTATTCTAAAAGGGGTATGCACTACGAAGCTTTGTCTGTTCAGGATAGAATGGAAAGAGCAGGAGTTAGCCCTGACATGGTGACATACAATTCTCTTATGTATGCGTTTTGTAGAGAAGGTAGGATGAGGGAGGCTGTAAGACTTTTCCGTGAAATCAAAGGTGCTACTCCGAACCATATAAGTTACACCACATTAATTGATGGGTATTGTAGAGTGAATGACCTGGAAGAAGCTTTAAGGTTGTGCGAGGTAATGAAGGCCAAGGGACTGTATCCAGGAGTTGTTACTTATAATTCAATTCTTCGCAAGTTGTGTGAACAAGGCAGGATGAGGGATGCAAATAAACTTTTGAATGAGATGAGTGATAGGAACGTTGAACCTGACAATGTCACATGTAACACATTGATTAATGCTTATTGTAAGATAGGAGATATGAGGTCTGCTGTCAATGTGAAGGACAGGATGTTGGCAGCTGGACTGAAGCTGGACGAGTTTACATATAAAGCACTCATTCATGGATTTTGCCAGGTTCTGGAGATGGACAGTGCTAAGGATATTTTATTTAGCATGCTTGGTGCAGGAATTTCTCCTAGTTATTGCACCTATACATGGATTATAGATGGTTACTGTAACCAGGGGAATGAAGCAGCAGTTATAAGACTACCGGAGAAAGGTCTTTGTGCTGATGTCTCTATGTACAGGGCATTAATAAGAAGGTTATGTAAACGTGAAAGGGTTGATGAAGCGGAAAAGGTTTTCAATCTTATGCGAGAGAAAGGTATATCAGGAGACAGTGTAATATATACTAGTCTTACATATGCTTACTTGAAAGCAGGAAAGTCCTGTGTAGTTTCAGCGATGCTAGATGAAATGTACAAGAGGAGGTTGATGGTGACACGCAAGATCTATAGATCTTTCAGTGCTTCTTATGCCAGTGATAATGATATCATACGCCTGTTTTGGGATCATATGGTAAAGAGAGGCCTAATGTCAAAAAATGTTATTACCAAGGAGATGCAGCAAACATAA

Protein Analysis

586

Amino Acids

66.66

Weight (kDa)

8.89

Isoelectric Point (pI)

30.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 128 - 221 4.3e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 152 - 210 2.4e-06 Pentatricopeptide repeat domain
PPR_long PF17177 158 - 286 1e-12 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 194 - 226 1.3e-10 PPR repeat
PPR_2 PF13041 197 - 240 1.9e-13 PPR repeat family
PPR PF01535 202 - 226 4.2e-08 PPR repeat
PPR_3 PF13812 220 - 279 2.1e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 232 - 281 5.8e-15 PPR repeat family
PPR PF01535 235 - 265 6.2e-07 PPR repeat
PPR_1 PF12854 264 - 295 3.6e-12 PPR repeat
PPR_2 PF13041 267 - 306 1.4e-09 PPR repeat family
PPR PF01535 270 - 296 7.9e-08 PPR repeat
TPR_24 PF23276 289 - 394 5.1e-12 Fungal tetratrico peptide repeats
PPR_long PF17177 295 - 387 8.3e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 295 - 345 1.5e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 296 - 329 2.7e-11 PPR repeat
PPR_2 PF13041 300 - 348 1.8e-14 PPR repeat family
PPR PF01535 303 - 333 1e-07 PPR repeat
PPR_long PF17177 317 - 414 5.9e-10 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 331 - 364 4.3e-09 PPR repeat
PPR_2 PF13041 335 - 374 3.6e-13 PPR repeat family
PPR_3 PF13812 358 - 402 5e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 366 - 398 4.2e-08 PPR repeat
PPR_2 PF13041 370 - 419 3.7e-15 PPR repeat family
PPR PF01535 373 - 402 6e-06 PPR repeat
PPR_3 PF13812 394 - 452 2.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 412 - 454 1.4e-06 PPR repeat family
PPR_1 PF12854 467 - 500 4.1e-08 PPR repeat
PPR_2 PF13041 472 - 515 3.8e-08 PPR repeat family
PPR PF01535 475 - 504 2.3e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1020, 1385
Acc36I ACCTGC 1 cut(s) 292
AccB7I CCANNNNNTGG 1 cut(s) 1261
AciI CCGC 1 cut(s) 1475
AclI AACGTT 1 cut(s) 1101
AclWI GGATC 1 cut(s) 1701
AcsI RAATTY 3 cut(s) 382, 677, 1311
AcuI CTGAAG 1 cut(s) 1229
AdeI CACNNNGTG 1 cut(s) 49
AfaI GTAC 5 cut(s) 138, 502, 605, 1427, 1604
AfiI CCNNNNNNNGG 5 cut(s) 805, 1261, 1338, 1400, 1690
AflII CTTAAG 1 cut(s) 314
AflIII ACRYGT 2 cut(s) 388, 1121
AgeI ACCGGT 1 cut(s) 23
AhlI ACTAGT 1 cut(s) 1535
AjnI CCWGG 6 cut(s) 132, 179, 951, 1003, 1254, 1362
AjuI GAANNNNNNNTTGG 2 cut(s) 429, 461
AluBI AGCT 7 cut(s) 117, 399, 460, 758, 962, 1202, 1213
AluI AGCT 7 cut(s) 117, 399, 460, 758, 962, 1202, 1213
Alw21I GWGCWC 1 cut(s) 462
Alw26I GTCTC 3 cut(s) 23, 1423, 1512
AlwI GGATC 1 cut(s) 1701
AlwNI CAGNNNCTG 1 cut(s) 1261
AoxI GGCC 4 cut(s) 166, 576, 987, 1711
ApeKI GCWGC 4 cut(s) 5, 1199, 1376, 1747
ApoI RAATTY 3 cut(s) 382, 677, 1311
AseI ATTAAT 3 cut(s) 923, 1137, 1436
AsiGI ACCGGT 1 cut(s) 23
Asp700I GAANNNNTTC 1 cut(s) 207
AspS9I GGNCC 1 cut(s) 360
AsuC2I CCSGG 1 cut(s) 580
AsuHPI GGTGA 5 cut(s) 38, 122, 253, 820, 1633
AvaII GGWCC 1 cut(s) 360
BanII GRGCYC 1 cut(s) 462
Bbv12I GWGCWC 1 cut(s) 462
BbvI GCAGC 2 cut(s) 1211, 1388
BccI CCATC 5 cut(s) 667, 923, 1261, 1343, 1612
BciT130I CCWGG 6 cut(s) 134, 181, 953, 1005, 1256, 1364
BciVI GTATCC 1 cut(s) 1011
BclI TGATCA 1 cut(s) 570
BcnI CCSGG 1 cut(s) 580
BcoDI GTCTC 3 cut(s) 23, 1423, 1512
BcuI ACTAGT 1 cut(s) 1535
BfaI CTAG 3 cut(s) 1320, 1536, 1592
BfmI CTRYAG 1 cut(s) 1636
BfrI CTTAAG 1 cut(s) 314
BfuAI ACCTGC 1 cut(s) 292
BfuI GTATCC 1 cut(s) 1011
BglII AGATCT 2 cut(s) 1632, 1640
BisI GCNGC 4 cut(s) 6, 1200, 1377, 1748
BlsI GCNGC 4 cut(s) 7, 1201, 1378, 1749
Bme1390I CCNGG 7 cut(s) 134, 181, 580, 953, 1005, 1256, 1364
Bme18I GGWCC 1 cut(s) 360
BmgT120I GGNCC 1 cut(s) 360
BmrFI CCNGG 7 cut(s) 134, 181, 580, 953, 1005, 1256, 1364
BmsI GCATC 4 cut(s) 430, 1054, 1578, 1734
BpmI CTGGAG 1 cut(s) 1283
Bpu10I CCTNAGC 1 cut(s) 1278
BpuMI CCSGG 1 cut(s) 580
BsaBI GATNNNNATC 1 cut(s) 254
BsaJI CCNNGG 6 cut(s) 157, 180, 579, 990, 1363, 1737
BsaWI WCCGGW 2 cut(s) 23, 1393
BsaXI ACNNNNNCTCC 2 cut(s) 1509, 1539
Bsc4I CCNNNNNNNGG 5 cut(s) 805, 1261, 1338, 1400, 1690
Bse118I RCCGGY 1 cut(s) 23
Bse1I ACTGG 1 cut(s) 1662
Bse3DI GCAATG 1 cut(s) 239
Bse8I GATNNNNATC 1 cut(s) 254
BseBI CCWGG 6 cut(s) 134, 181, 953, 1005, 1256, 1364
BseDI CCNNGG 6 cut(s) 157, 180, 579, 990, 1363, 1737
BseGI GGATG 7 cut(s) 255, 540, 646, 858, 1062, 1069, 1197
BseJI GATNNNNATC 1 cut(s) 254
BseLI CCNNNNNNNGG 5 cut(s) 805, 1261, 1338, 1400, 1690
BseMI GCAATG 1 cut(s) 239
BseMII CTCAG 3 cut(s) 47, 127, 656
BseNI ACTGG 1 cut(s) 1662
BseRI GAGGAG 1 cut(s) 1624
BseXI GCAGC 2 cut(s) 1211, 1388
BsgI GTGCAG 2 cut(s) 270, 1326
Bsh1285I CGRYCG 1 cut(s) 373
BshFI GGCC 4 cut(s) 168, 578, 989, 1713
BshTI ACCGGT 1 cut(s) 23
BsiEI CGRYCG 1 cut(s) 373
BsiHKAI GWGCWC 1 cut(s) 462
BsiSI CCGG 3 cut(s) 24, 579, 1394
BslFI GGGAC 1 cut(s) 1008
BslI CCNNNNNNNGG 5 cut(s) 805, 1261, 1338, 1400, 1690
BsmAI GTCTC 3 cut(s) 23, 1423, 1512
BsmFI GGGAC 1 cut(s) 1008
BsmI GAATGC 1 cut(s) 352
BsnI GGCC 4 cut(s) 168, 578, 989, 1713
Bsp1286I GDGCHC 1 cut(s) 462
Bsp1407I TGTACA 3 cut(s) 603, 1425, 1602
Bsp143I GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
Bsp19I CCATGG 1 cut(s) 157
BspACI CCGC 1 cut(s) 1475
BspANI GGCC 4 cut(s) 168, 578, 989, 1713
BspCNI CTCAG 3 cut(s) 46, 126, 657
BspHI TCATGA 1 cut(s) 462
BspMI ACCTGC 1 cut(s) 292
BspPI GGATC 1 cut(s) 1701
BspTI CTTAAG 1 cut(s) 314
BsrDI GCAATG 1 cut(s) 239
BsrFI RCCGGY 1 cut(s) 23
BsrGI TGTACA 3 cut(s) 603, 1425, 1602
BsrI ACTGG 1 cut(s) 1662
BssAI RCCGGY 1 cut(s) 23
BssECI CCNNGG 6 cut(s) 157, 180, 579, 990, 1363, 1737
BssMI GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
BssT1I CCWWGG 3 cut(s) 157, 990, 1737
Bst2UI CCWGG 6 cut(s) 134, 181, 953, 1005, 1256, 1364
Bst4CI ACNGT 5 cut(s) 47, 999, 1274, 1358, 1523
Bst6I CTCTTC 1 cut(s) 114
BstAFI CTTAAG 1 cut(s) 314
BstAPI GCANNNNNTGC 1 cut(s) 229
BstAUI TGTACA 3 cut(s) 603, 1425, 1602
BstC8I GCNNGC 4 cut(s) 221, 401, 495, 1298
BstDEI CTNAG 5 cut(s) 33, 113, 426, 665, 1278
BstDSI CCRYGG 1 cut(s) 157
BstF5I GGATG 7 cut(s) 255, 540, 646, 858, 1062, 1069, 1197
BstKTI GATC 6 cut(s) 373, 411, 573, 1635, 1643, 1696
BstMAI GTCTC 3 cut(s) 23, 1423, 1512
BstMBI GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
BstMCI CGRYCG 1 cut(s) 373
BstMWI GCNNNNNNNGC 4 cut(s) 229, 490, 503, 1658
BstNI CCWGG 6 cut(s) 134, 181, 953, 1005, 1256, 1364
BstNSI RCATGY 4 cut(s) 392, 497, 1125, 1300
BstSCI CCNGG 7 cut(s) 132, 179, 578, 951, 1003, 1254, 1362
BstSFI CTRYAG 1 cut(s) 1636
BstV1I GCAGC 2 cut(s) 1211, 1388
BstX2I RGATCY 2 cut(s) 1632, 1640
BstXI CCANNNNNNTGG 1 cut(s) 164
BstYI RGATCY 2 cut(s) 1632, 1640
BsuI GTATCC 1 cut(s) 1011
BsuRI GGCC 4 cut(s) 168, 578, 989, 1713
BtgI CCRYGG 1 cut(s) 157
BtgZI GCGATG 1 cut(s) 1601
BtsCI GGATG 7 cut(s) 255, 540, 646, 858, 1062, 1069, 1197
BtsIMutI CAGTG 6 cut(s) 52, 80, 1279, 1528, 1654, 1669
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 4 cut(s) 221, 401, 495, 1298
CaiI CAGNNNCTG 1 cut(s) 1261
CciI TCATGA 1 cut(s) 462
Cfr10I RCCGGY 1 cut(s) 23
Cfr13I GGNCC 1 cut(s) 360
CsiI ACCWGGT 1 cut(s) 132
Csp6I GTAC 5 cut(s) 137, 501, 604, 1426, 1603
CspAI ACCGGT 1 cut(s) 23
CspCI CAANNNNNGTGG 2 cut(s) 907, 942
CviQI GTAC 5 cut(s) 137, 501, 604, 1426, 1603
DdeI CTNAG 5 cut(s) 33, 113, 426, 665, 1278
DpnI GATC 6 cut(s) 372, 410, 572, 1634, 1642, 1695
DpnII GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
DraIII CACNNNGTG 1 cut(s) 49
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 3 cut(s) 157, 990, 1737
Eco147I AGGCCT 1 cut(s) 1713
Eco24I GRGCYC 1 cut(s) 462
Eco32I GATATC 2 cut(s) 723, 1675
Eco47I GGWCC 1 cut(s) 360
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 1 cut(s) 1229
EcoICRI GAGCTC 1 cut(s) 460
EcoRI GAATTC 2 cut(s) 382, 677
EcoRII CCWGG 6 cut(s) 132, 179, 951, 1003, 1254, 1362
EcoRV GATATC 2 cut(s) 723, 1675
EcoT14I CCWWGG 3 cut(s) 157, 990, 1737
EcoT38I GRGCYC 1 cut(s) 462
ErhI CCWWGG 3 cut(s) 157, 990, 1737
FalI AAGNNNNNCTT 6 cut(s) 212, 244, 308, 340, 674, 706
FaqI GGGAC 1 cut(s) 1008
FauNDI CATATG 2 cut(s) 1546, 1698
FbaI TGATCA 1 cut(s) 570
Fnu4HI GCNGC 4 cut(s) 6, 1200, 1377, 1748
FokI GGATG 7 cut(s) 242, 547, 653, 865, 1069, 1076, 1204
FriOI GRGCYC 1 cut(s) 462
Fsp4HI GCNGC 4 cut(s) 6, 1200, 1377, 1748
FspBI CTAG 3 cut(s) 1320, 1536, 1592
GluI GCNGC 4 cut(s) 6, 1200, 1377, 1748
GsuI CTGGAG 1 cut(s) 1283
HaeIII GGCC 4 cut(s) 168, 578, 989, 1713
HapII CCGG 3 cut(s) 24, 579, 1394
HindIII AAGCTT 2 cut(s) 756, 960
HinfI GANTC 6 cut(s) 31, 104, 203, 250, 469, 616
HpaII CCGG 3 cut(s) 24, 579, 1394
HphI GGTGA 5 cut(s) 38, 122, 253, 820, 1633
Hpy166II GTNNAC 4 cut(s) 559, 1046, 1224, 1454
Hpy188I TCNGA 2 cut(s) 360, 900
Hpy188III TCNNGA 7 cut(s) 88, 374, 463, 695, 770, 1262, 1515
Hpy8I GTNNAC 4 cut(s) 559, 1046, 1224, 1454
Hpy99I CGWCG 1 cut(s) 340
HpyAV CCTTC 6 cut(s) 186, 643, 839, 979, 1177, 1437
HpyCH4III ACNGT 5 cut(s) 47, 999, 1274, 1358, 1523
HpyCH4IV ACGT 3 cut(s) 716, 1101, 1456
HpyF10VI GCNNNNNNNGC 4 cut(s) 229, 490, 503, 1658
HpyF3I CTNAG 5 cut(s) 33, 113, 426, 665, 1278
HpySE526I ACGT 3 cut(s) 716, 1101, 1456
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
LmnI GCTCC 2 cut(s) 78, 457
Lsp1109I GCAGC 2 cut(s) 1211, 1388
LweI GCATC 4 cut(s) 430, 1054, 1578, 1734
MabI ACCWGGT 1 cut(s) 132
MaeI CTAG 3 cut(s) 1320, 1536, 1592
MaeII ACGT 3 cut(s) 716, 1101, 1456
MaeIII GTNAC 8 cut(s) 808, 911, 1012, 1117, 1124, 1352, 1358, 1621
MalI GATC 6 cut(s) 372, 410, 572, 1634, 1642, 1695
MboI GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
MboII GAAGA 4 cut(s) 101, 181, 968, 1022
MfeI CAATTG 1 cut(s) 57
MflI RGATCY 2 cut(s) 1632, 1640
MhlI GDGCHC 1 cut(s) 462
MlyI GAGTC 1 cut(s) 25
MroXI GAANNNNTTC 1 cut(s) 207
MseI TTAA 8 cut(s) 11, 315, 480, 525, 923, 965, 1137, 1436
MslI CAYNNNNRTG 2 cut(s) 162, 492
MspA1I CMGCKG 1 cut(s) 1202
MspCI CTTAAG 1 cut(s) 314
MspI CCGG 3 cut(s) 24, 579, 1394
MspR9I CCNGG 7 cut(s) 134, 181, 580, 953, 1005, 1256, 1364
MunI CAATTG 1 cut(s) 57
Mva1269I GAATGC 1 cut(s) 352
MvaI CCWGG 6 cut(s) 134, 181, 953, 1005, 1256, 1364
MwoI GCNNNNNNNGC 4 cut(s) 229, 490, 503, 1658
NciI CCSGG 1 cut(s) 580
NcoI CCATGG 1 cut(s) 157
NdeI CATATG 2 cut(s) 1546, 1698
NdeII GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
NmeAIII GCCGAG 1 cut(s) 98
NmuCI GTSAC 3 cut(s) 808, 1117, 1621
NspI RCATGY 4 cut(s) 392, 497, 1125, 1300
PaeI GCATGC 2 cut(s) 497, 1300
PagI TCATGA 1 cut(s) 462
PceI AGGCCT 1 cut(s) 1713
PciI ACATGT 2 cut(s) 388, 1121
PctI GAATGC 1 cut(s) 352
PdmI GAANNNNTTC 1 cut(s) 207
PfeI GAWTC 5 cut(s) 104, 203, 250, 469, 616
PflFI GACNNNGTC 1 cut(s) 1115
PflMI CCANNNNNTGG 1 cut(s) 1261
PfoI TCCNGGA 1 cut(s) 1003
PinAI ACCGGT 1 cut(s) 23
PkrI GCNGC 4 cut(s) 7, 1201, 1378, 1749
Ple19I CGATCG 1 cut(s) 373
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PscI ACATGT 2 cut(s) 388, 1121
PshBI ATTAAT 3 cut(s) 923, 1137, 1436
PsiI TTATAA 2 cut(s) 1020, 1385
Psp124BI GAGCTC 1 cut(s) 462
Psp1406I AACGTT 1 cut(s) 1101
Psp6I CCWGG 6 cut(s) 132, 179, 951, 1003, 1254, 1362
PspGI CCWGG 6 cut(s) 132, 179, 951, 1003, 1254, 1362
PspPI GGNCC 1 cut(s) 360
PstNI CAGNNNCTG 1 cut(s) 1261
PsuI RGATCY 2 cut(s) 1632, 1640
PsyI GACNNNGTC 1 cut(s) 1115
PvuI CGATCG 1 cut(s) 373
PvuII CAGCTG 1 cut(s) 1202
RsaI GTAC 5 cut(s) 138, 502, 605, 1427, 1604
RsaNI GTAC 5 cut(s) 137, 501, 604, 1426, 1603
RseI CAYNNNNRTG 2 cut(s) 162, 492
SacI GAGCTC 1 cut(s) 462
SaqAI TTAA 8 cut(s) 11, 315, 480, 525, 923, 965, 1137, 1436
SatI GCNGC 4 cut(s) 6, 1200, 1377, 1748
Sau3AI GATC 6 cut(s) 370, 408, 570, 1632, 1640, 1693
Sau96I GGNCC 1 cut(s) 360
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 7 cut(s) 134, 181, 580, 953, 1005, 1256, 1364
SduI GDGCHC 1 cut(s) 462
SexAI ACCWGGT 1 cut(s) 132
SfaNI GCATC 4 cut(s) 430, 1054, 1578, 1734
SfcI CTRYAG 1 cut(s) 1636
SinI GGWCC 1 cut(s) 360
SmiMI CAYNNNNRTG 2 cut(s) 162, 492
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
SpeI ACTAGT 1 cut(s) 1535
SphI GCATGC 2 cut(s) 497, 1300
SseBI AGGCCT 1 cut(s) 1713
SsiI CCGC 1 cut(s) 1475
SspMI CTAG 3 cut(s) 1320, 1536, 1592
SstI GAGCTC 1 cut(s) 462
StuI AGGCCT 1 cut(s) 1713
StyD4I CCNGG 7 cut(s) 132, 179, 578, 951, 1003, 1254, 1362
StyI CCWWGG 3 cut(s) 157, 990, 1737
TaaI ACNGT 5 cut(s) 47, 999, 1274, 1358, 1523
TaiI ACGT 3 cut(s) 719, 1104, 1459
TaqI TCGA 1 cut(s) 201
TatI WGTACW 4 cut(s) 500, 603, 1425, 1602
TfiI GAWTC 5 cut(s) 104, 203, 250, 469, 616
Tru1I TTAA 8 cut(s) 11, 315, 480, 525, 923, 965, 1137, 1436
Tru9I TTAA 8 cut(s) 11, 315, 480, 525, 923, 965, 1137, 1436
TscAI CASTG 6 cut(s) 52, 80, 1279, 1528, 1654, 1669
TseFI GTSAC 3 cut(s) 808, 1117, 1621
TseI GCWGC 4 cut(s) 5, 1199, 1376, 1747
Tsp45I GTSAC 3 cut(s) 808, 1117, 1621
TspGWI ACGGA 2 cut(s) 324, 866
TspRI CASTG 6 cut(s) 52, 80, 1279, 1528, 1654, 1669
Tth111I GACNNNGTC 1 cut(s) 1115
Van91I CCANNNNNTGG 1 cut(s) 1261
Vha464I CTTAAG 1 cut(s) 314
VpaK11BI GGWCC 1 cut(s) 360
VspI ATTAAT 3 cut(s) 923, 1137, 1436
XapI RAATTY 3 cut(s) 382, 677, 1311
XceI RCATGY 4 cut(s) 392, 497, 1125, 1300
XmnI GAANNNNTTC 1 cut(s) 207
XspI CTAG 3 cut(s) 1320, 1536, 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.