Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0013463

Physical Location & Seq

Genomic Coordinates Forward (+)

31224733 .. 31226586

Gene Structure 1854 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGCTTTCGCCGACTTTCTTGCCACCACGTATTGGTATCAGCCTTTATCAAACACCTTCTCTGCTCTCCATTCGACCGCCAAAACACACAAAGCATTCGAATTCAAAGCCTAATTATCTCAAAACCTCATCAAATTTTCGCTGTTTTTCTTGTGAAACTTCATCTTCTGCGTCAGATTTTCAGAATTCGAACTCCCACGAAAACCCAGAGGCTGAATTTTCGGGTACTCAATCGCTGAGCCAAAGCTTACGGCCCTACTTGCTTGCTCTTTGGCTTCGGTCATGTCGCGGTCTGAAAGAAGTGAGGAGATTGCATGCGATTGTTTTGAGGTGTTTGGCGAACCCGGTTACGTATGTTTTCAACAATTTGATGTGTGCGTATTTGGTTTTTGGGAAGTTGGGGGACGCCCGGAAGGTGTTTGATGAAATGACTGTGAGAAATGTGGTTTCTTGGACTGCCATTATTAATGGGTACTTGAACTTTGGTTTTGACGATGAGGCTTTGGGGTTGTTTGGGGAAGCTATCAATGATGGGGTTGTGCCGAATGGTAAGATGTTCGTGTGCTTGTTAAATTTATGTAGTGAGAGAGGGGATTATGAGCTTGGGAAGCAAATTCATGGTGGTGTTTTGAAAGGGGGTTGGAGCAACTTGATTGTTGACAGCGCCGTTGTTAAATTATATGCGCAGTGCGGAGAGCTAGTGAGTGCTTTCTGCGCATTTGATCAGATGCCGAAGTGGGATGTTGTTTGCTGGACAACTATGATCACTGCGTGTTCGCAACAAGGGCATGGACAGGAGGCTTTTTCGCTGTTCTCGCAGATGTTGAGTGATGGGTTTTCTCCGAATGAGTTTACAGTGTGTGGTGTTCTCAAGGCTTGTGGGGAAGAGAAGGAATTAGGATTTGGGAGACAGTTGCATGGTGCCATAGTTAAGAAGATTTACAAGAATGATATTTTCATAGACACTTCTCTAGTTGATATGTATGCAAAATGTGGGGAGATGGTACACTCGAGAAACGTATTTGATGGAATGAGAAACCGAAACACAGTTACATGGACATCTATTATAGCGGGGTATGCGCGGAAGGGCCTCAGTGAGGAGGCCATATACCTCTTTCAAGTAATGAAGAGGCGGAACATATTGGTCAACAACTTGACCATTGTAAGCATCCTCAGAGCTTGTGGTGGGATTAGGAATTCGGTGATGGGGAGAGAAGTTCATGCACAGATAGTCAAGAACTCGGTCGAAAGACTCAAAACCAATTTACACCTAGGAAGTACTCTAGTGTGGTTCTACTGTAGGTGTGGAGAGTACTCCAATGCCACAAGGGTCCTCCAACAAATGCCTTTACGAGATGTTGTCTCATGGACTGCAATCATTTCTGGTTGTACACAACTTGGGCATGAGGCTGAAGCTCTGGAATTCTTGAAAGAAATGATGGAGGACGGGGTGGAGCCCAACGCGTTTACTTATTCATCCGCTTTGAAAGCATGTGCTAAGCTGGAAACTGTTCTGCATGGGAAATTGATTCACTCCTCTGCAAACAAAAGTCCTGCCATGTCTAATGTGTTTGTAGGTAGCGCTCTGATTTATATGTATGCAAAATGTGGGTACGTAACAGAGGCATTTGAAGTTTTTGACAGCATGCCAGAACGTAATTTGGTTTCTTGGAAGGCTATGATAGTGGGTTATGCAACAAATGGTCTCTGCCAAGAGGCTATGAAGCTCATGTACCGTATGCGAGCAGAAGGTTTTGAGGTGGATGATTACATCCTTTCCACTGTTCTTACTGCATGTGGAGATCTTGGATGGGAGATAGATCCTTCTTTGGAGTGTAGCCTACGGTCTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

618

Amino Acids

68.68

Weight (kDa)

7.44

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	247 - 293	1.2e-12	PPR repeat family
PPR	PF01535	249 - 279	2.3e-07	PPR repeat
PPR_2	PF13041	347 - 394	9.3e-11	PPR repeat family
PPR	PF01535	350 - 380	1e-07	PPR repeat
PPR_2	PF13041	451 - 500	6e-13	PPR repeat family
PPR_3	PF13812	452 - 499	6.3e-08	Pentatricopeptide repeat domain
PPR	PF01535	454 - 484	3.4e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18520
fragaria_vesca	FvH4_5g38291
malus_domestica	MD15G1361300.v1.1
prunus_persica	Prupe.1G508700_v2.0.a1
pyrus_communis	pycom15g32280
rosa_chinensis	RchiOBHm_Chr7g0240331
rosa_laevigata	RLG00000000684
rosa_multiflora	Rmu_sc0002676.1_g000012 Rmu_sc0025468.1_g000002 Rmu_sc0037875.1_g000001 Rmu_sc0038463.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220210
rosa_rugosa	Rorug07G0334900
rosa_samantha	Rh7AG489200 Rh7BG462100 Rh7CG505400 Rh7DG473200
rosa_wichuraiana	Rw7G040930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	684, 715
AccB1I	GGYRCC	1 cut(s)	920
AccB7I	CCANNNNNTGG	1 cut(s)	32
AccII	CGCG	3 cut(s)	288, 1081, 1463
AciI	CCGC	7 cut(s)	77, 288, 690, 1070, 1081, 1132, 1479
AclWI	GGATC	1 cut(s)	1814
AcsI	RAATTY	8 cut(s)	100, 133, 184, 215, 571, 612, 1195, 1421
AcuI	CTGAAG	1 cut(s)	1431
AcyI	GRCGYC	1 cut(s)	405
AdeI	CACNNNGTG	1 cut(s)	771
AfaI	GTAC	8 cut(s)	226, 473, 1005, 1279, 1313, 1390, 1613, 1733
AfeI	AGCGCT	1 cut(s)	1582
AfiI	CCNNNNNNNGG	2 cut(s)	32, 1096
AflIII	ACRYGT	1 cut(s)	1461
AgsI	TTSAA	8 cut(s)	105, 361, 478, 631, 1118, 1429, 1486, 1631
AjuI	GAANNNNNNNTTGG	2 cut(s)	885, 917
AluBI	AGCT	8 cut(s)	246, 521, 601, 697, 1178, 1415, 1501, 1726
AluI	AGCT	8 cut(s)	246, 521, 601, 697, 1178, 1415, 1501, 1726
Alw26I	GTCTC	3 cut(s)	901, 1366, 1709
AlwI	GGATC	1 cut(s)	1814
AlwNI	CAGNNNCTG	1 cut(s)	212
Ama87I	CYCGRG	1 cut(s)	1009
Aor51HI	AGCGCT	1 cut(s)	1582
AoxI	GGCC	3 cut(s)	251, 1087, 1101
ApoI	RAATTY	8 cut(s)	100, 133, 184, 215, 571, 612, 1195, 1421
AseI	ATTAAT	1 cut(s)	465
Asp700I	GAANNNNTTC	1 cut(s)	1509
AspA2I	CCTAGG	1 cut(s)	1270
AspLEI	GCGC	5 cut(s)	665, 685, 716, 1081, 1583
AspS9I	GGNCC	3 cut(s)	252, 1087, 1330
AsuC2I	CCSGG	2 cut(s)	344, 409
AsuHPI	GGTGA	1 cut(s)	1213
AsuII	TTCGAA	2 cut(s)	98, 188
AvaI	CYCGRG	1 cut(s)	1009
AvaII	GGWCC	1 cut(s)	1330
AvrII	CCTAGG	1 cut(s)	1270
BanI	GGYRCC	1 cut(s)	920
BanII	GRGCYC	1 cut(s)	1458
BarI	GAAGNNNNNNTAC	2 cut(s)	1715, 1747
BccI	CCATC	7 cut(s)	524, 824, 994, 1019, 1198, 1432, 1803
BceAI	ACGGC	2 cut(s)	266, 650
BcgI	CGANNNNNNTGC	1 cut(s)	35
BclI	TGATCA	2 cut(s)	721, 762
BcnI	CCSGG	2 cut(s)	344, 409
BcoDI	GTCTC	3 cut(s)	901, 1366, 1709
BfaI	CTAG	5 cut(s)	698, 971, 1271, 1283, 1848
BfmI	CTRYAG	1 cut(s)	1297
BfoI	RGCGCY	2 cut(s)	666, 1584
BglII	AGATCT	1 cut(s)	1801
BlnI	CCTAGG	1 cut(s)	1270
BlpI	GCTNAGC	2 cut(s)	236, 1497
BmcAI	AGTACT	2 cut(s)	1279, 1313
Bme1390I	CCNGG	2 cut(s)	344, 409
Bme18I	GGWCC	1 cut(s)	1330
BmeT110I	CYCGRG	1 cut(s)	1009
BmgT120I	GGNCC	3 cut(s)	252, 1087, 1330
BmiI	GGNNCC	3 cut(s)	922, 1331, 1455
BmrFI	CCNGG	2 cut(s)	344, 409
BmsI	GCATC	2 cut(s)	717, 1176
Bpu1102I	GCTNAGC	2 cut(s)	236, 1497
Bpu14I	TTCGAA	2 cut(s)	98, 188
BpuEI	CTTGAG	1 cut(s)	854
BpuMI	CCSGG	2 cut(s)	344, 409
BsaAI	YACGTR	3 cut(s)	29, 351, 1615
BsaHI	GRCGYC	1 cut(s)	405
BsaI	GGTCTC	1 cut(s)	1709
BsaJI	CCNNGG	1 cut(s)	1270
BsaXI	ACNNNNNCTCC	2 cut(s)	684, 714
Bsc4I	CCNNNNNNNGG	2 cut(s)	32, 1096
BseDI	CCNNGG	1 cut(s)	1270
BseGI	GGATG	6 cut(s)	745, 1167, 1475, 1768, 1770, 1814
BseLI	CCNNNNNNNGG	2 cut(s)	32, 1096
BseMII	CTCAG	3 cut(s)	227, 1105, 1186
BseRI	GAGGAG	3 cut(s)	319, 1112, 1525
Bsh1236I	CGCG	3 cut(s)	288, 1081, 1463
Bsh1285I	CGRYCG	2 cut(s)	77, 1245
BshFI	GGCC	3 cut(s)	253, 1089, 1103
BshNI	GGYRCC	1 cut(s)	920
BsiEI	CGRYCG	2 cut(s)	77, 1245
BsiHKCI	CYCGRG	1 cut(s)	1009
BsiSI	CCGG	2 cut(s)	344, 409
BslFI	GGGAC	1 cut(s)	416
BslI	CCNNNNNNNGG	2 cut(s)	32, 1096
BsmAI	GTCTC	3 cut(s)	901, 1366, 1709
BsmFI	GGGAC	1 cut(s)	416
BsmI	GAATGC	1 cut(s)	94
BsnI	GGCC	3 cut(s)	253, 1089, 1103
Bso31I	GGTCTC	1 cut(s)	1709
BsoBI	CYCGRG	1 cut(s)	1009
Bsp119I	TTCGAA	2 cut(s)	98, 188
Bsp1286I	GDGCHC	1 cut(s)	1458
Bsp1407I	TGTACA	1 cut(s)	1388
Bsp143I	GATC	4 cut(s)	721, 762, 1801, 1819
Bsp1720I	GCTNAGC	2 cut(s)	236, 1497
BspACI	CCGC	7 cut(s)	77, 288, 690, 1070, 1081, 1132, 1479
BspANI	GGCC	3 cut(s)	253, 1089, 1103
BspCNI	CTCAG	3 cut(s)	228, 1104, 1185
BspFNI	CGCG	3 cut(s)	288, 1081, 1463
BspLI	GGNNCC	3 cut(s)	922, 1331, 1455
BspPI	GGATC	1 cut(s)	1814
BspT104I	TTCGAA	2 cut(s)	98, 188
BspT107I	GGYRCC	1 cut(s)	920
BspTNI	GGTCTC	1 cut(s)	1709
BsrGI	TGTACA	1 cut(s)	1388
BssECI	CCNNGG	1 cut(s)	1270
BssMI	GATC	4 cut(s)	721, 762, 1801, 1819
BssNI	GRCGYC	1 cut(s)	405
BssT1I	CCWWGG	1 cut(s)	1270
Bst4CI	ACNGT	9 cut(s)	433, 856, 912, 1048, 1298, 1510, 1736, 1783, 1845
Bst6I	CTCTTC	2 cut(s)	879, 1121
BstACI	GRCGYC	1 cut(s)	405
BstAUI	TGTACA	1 cut(s)	1388
BstBAI	YACGTR	3 cut(s)	29, 351, 1615
BstBI	TTCGAA	2 cut(s)	98, 188
BstC8I	GCNNGC	4 cut(s)	264, 315, 1646, 1743
BstDEI	CTNAG	4 cut(s)	236, 1091, 1172, 1497
BstENI	CCTNNNNNAGG	1 cut(s)	1094
BstF5I	GGATG	6 cut(s)	745, 1167, 1475, 1768, 1770, 1814
BstFNI	CGCG	3 cut(s)	288, 1081, 1463
BstH2I	RGCGCY	2 cut(s)	666, 1584
BstHHI	GCGC	5 cut(s)	665, 685, 716, 1081, 1583
BstKTI	GATC	4 cut(s)	724, 765, 1804, 1822
BstMAI	GTCTC	3 cut(s)	901, 1366, 1709
BstMBI	GATC	4 cut(s)	721, 762, 1801, 1819
BstMCI	CGRYCG	2 cut(s)	77, 1245
BstMWI	GCNNNNNNNGC	7 cut(s)	259, 607, 713, 784, 814, 1076, 1487
BstNSI	RCATGY	4 cut(s)	317, 1494, 1648, 1797
BstSCI	CCNGG	2 cut(s)	342, 407
BstSFI	CTRYAG	1 cut(s)	1297
BstSNI	TACGTA	2 cut(s)	351, 1615
BstUI	CGCG	3 cut(s)	288, 1081, 1463
BstX2I	RGATCY	2 cut(s)	1801, 1819
BstYI	RGATCY	2 cut(s)	1801, 1819
BsuRI	GGCC	3 cut(s)	253, 1089, 1103
BtsCI	GGATG	6 cut(s)	745, 1167, 1475, 1768, 1770, 1814
BtsI	GCAGTG	2 cut(s)	692, 765
BtsIMutI	CAGTG	5 cut(s)	692, 765, 861, 1099, 1779
Cac8I	GCNNGC	4 cut(s)	264, 315, 1646, 1743
CaiI	CAGNNNCTG	1 cut(s)	212
CfoI	GCGC	5 cut(s)	665, 685, 716, 1081, 1583
Cfr13I	GGNCC	3 cut(s)	252, 1087, 1330
CseI	GACGC	2 cut(s)	159, 413
Csp6I	GTAC	8 cut(s)	225, 472, 1004, 1278, 1312, 1389, 1612, 1732
CspCI	CAANNNNNGTGG	2 cut(s)	859, 894
CviQI	GTAC	8 cut(s)	225, 472, 1004, 1278, 1312, 1389, 1612, 1732
DdeI	CTNAG	4 cut(s)	236, 1091, 1172, 1497
DpnI	GATC	4 cut(s)	723, 764, 1803, 1821
DpnII	GATC	4 cut(s)	721, 762, 1801, 1819
DraIII	CACNNNGTG	1 cut(s)	771
Eam1104I	CTCTTC	2 cut(s)	879, 1121
EarI	CTCTTC	2 cut(s)	879, 1121
EciI	GGCGGA	1 cut(s)	1147
Eco105I	TACGTA	2 cut(s)	351, 1615
Eco130I	CCWWGG	1 cut(s)	1270
Eco24I	GRGCYC	1 cut(s)	1458
Eco31I	GGTCTC	1 cut(s)	1709
Eco47I	GGWCC	1 cut(s)	1330
Eco47III	AGCGCT	1 cut(s)	1582
Eco57I	CTGAAG	1 cut(s)	1431
Eco88I	CYCGRG	1 cut(s)	1009
EcoNI	CCTNNNNNAGG	1 cut(s)	1094
EcoO109I	RGGNCCY	2 cut(s)	1087, 1330
EcoRI	GAATTC	4 cut(s)	100, 184, 1195, 1421
EcoT14I	CCWWGG	1 cut(s)	1270
EcoT38I	GRGCYC	1 cut(s)	1458
ErhI	CCWWGG	1 cut(s)	1270
FaqI	GGGAC	1 cut(s)	416
FauI	CCCGC	1 cut(s)	1063
FbaI	TGATCA	2 cut(s)	721, 762
FokI	GGATG	6 cut(s)	752, 1154, 1462, 1757, 1775, 1821
FriOI	GRGCYC	1 cut(s)	1458
FspBI	CTAG	5 cut(s)	698, 971, 1271, 1283, 1848
FspI	TGCGCA	2 cut(s)	684, 715
GlaI	GCGC	5 cut(s)	664, 684, 715, 1080, 1582
HaeII	RGCGCY	2 cut(s)	666, 1584
HaeIII	GGCC	3 cut(s)	253, 1089, 1103
HapII	CCGG	2 cut(s)	344, 409
HgaI	GACGC	2 cut(s)	159, 413
HhaI	GCGC	5 cut(s)	665, 685, 716, 1081, 1583
Hin1I	GRCGYC	1 cut(s)	405
Hin6I	GCGC	5 cut(s)	663, 683, 714, 1079, 1581
HinP1I	GCGC	5 cut(s)	663, 683, 714, 1079, 1581
HincII	GTYRAC	2 cut(s)	658, 1147
HindII	GTYRAC	2 cut(s)	658, 1147
HindIII	AAGCTT	1 cut(s)	244
HinfI	GANTC	2 cut(s)	1251, 1528
HpaII	CCGG	2 cut(s)	344, 409
HphI	GGTGA	1 cut(s)	1213
Hpy166II	GTNNAC	6 cut(s)	658, 852, 1006, 1147, 1391, 1467
Hpy188I	TCNGA	7 cut(s)	175, 183, 294, 726, 843, 1175, 1587
Hpy188III	TCNNGA	4 cut(s)	1011, 1234, 1418, 1426
Hpy8I	GTNNAC	6 cut(s)	658, 852, 1006, 1147, 1391, 1467
HpyAV	CCTTC	7 cut(s)	66, 406, 883, 1078, 1666, 1742, 1833
HpyCH4III	ACNGT	9 cut(s)	433, 856, 912, 1048, 1298, 1510, 1736, 1783, 1845
HpyCH4IV	ACGT	5 cut(s)	28, 350, 1017, 1614, 1654
HpyF10VI	GCNNNNNNNGC	7 cut(s)	259, 607, 713, 784, 814, 1076, 1487
HpyF3I	CTNAG	4 cut(s)	236, 1091, 1172, 1497
HpySE526I	ACGT	5 cut(s)	28, 350, 1017, 1614, 1654
Hsp92I	GRCGYC	1 cut(s)	405
HspAI	GCGC	5 cut(s)	663, 683, 714, 1079, 1581
Ksp22I	TGATCA	2 cut(s)	721, 762
Kzo9I	GATC	4 cut(s)	721, 762, 1801, 1819
LmnI	GCTCC	2 cut(s)	642, 1453
LweI	GCATC	2 cut(s)	717, 1176
MaeI	CTAG	5 cut(s)	698, 971, 1271, 1283, 1848
MaeII	ACGT	5 cut(s)	28, 350, 1017, 1614, 1654
MaeIII	GTNAC	3 cut(s)	346, 1048, 1615
MalI	GATC	4 cut(s)	723, 764, 1803, 1821
MboI	GATC	4 cut(s)	721, 762, 1801, 1819
MboII	GAAGA	4 cut(s)	156, 896, 946, 1138
MflI	RGATCY	2 cut(s)	1801, 1819
MhlI	GDGCHC	1 cut(s)	1458
MluI	ACGCGT	1 cut(s)	1461
MlyI	GAGTC	1 cut(s)	1245
MmeI	TCCRAC	2 cut(s)	620, 1360
MroXI	GAANNNNTTC	1 cut(s)	1509
MseI	TTAA	4 cut(s)	465, 569, 672, 930
MslI	CAYNNNNRTG	1 cut(s)	621
MspI	CCGG	2 cut(s)	344, 409
MspR9I	CCNGG	2 cut(s)	344, 409
Mva1269I	GAATGC	1 cut(s)	94
MvnI	CGCG	3 cut(s)	288, 1081, 1463
MwoI	GCNNNNNNNGC	7 cut(s)	259, 607, 713, 784, 814, 1076, 1487
NciI	CCSGG	2 cut(s)	344, 409
NdeII	GATC	4 cut(s)	721, 762, 1801, 1819
NlaIV	GGNNCC	3 cut(s)	922, 1331, 1455
NsbI	TGCGCA	2 cut(s)	684, 715
NspI	RCATGY	4 cut(s)	317, 1494, 1648, 1797
NspV	TTCGAA	2 cut(s)	98, 188
PaeI	GCATGC	2 cut(s)	317, 1648
PaeR7I	CTCGAG	1 cut(s)	1009
PctI	GAATGC	1 cut(s)	94
PdmI	GAANNNNTTC	1 cut(s)	1509
PfeI	GAWTC	1 cut(s)	1528
PflMI	CCANNNNNTGG	1 cut(s)	32
PleI	GAGTC	1 cut(s)	1245
PpsI	GAGTC	1 cut(s)	1245
Ppu21I	YACGTR	3 cut(s)	29, 351, 1615
PpuMI	RGGWCCY	1 cut(s)	1330
PshBI	ATTAAT	1 cut(s)	465
Psp5II	RGGWCCY	1 cut(s)	1330
PspN4I	GGNNCC	3 cut(s)	922, 1331, 1455
PspPI	GGNCC	3 cut(s)	252, 1087, 1330
PspPPI	RGGWCCY	1 cut(s)	1330
PstNI	CAGNNNCTG	1 cut(s)	212
PsuI	RGATCY	2 cut(s)	1801, 1819
RsaI	GTAC	8 cut(s)	226, 473, 1005, 1279, 1313, 1390, 1613, 1733
RsaNI	GTAC	8 cut(s)	225, 472, 1004, 1278, 1312, 1389, 1612, 1732
RseI	CAYNNNNRTG	1 cut(s)	621
SaqAI	TTAA	4 cut(s)	465, 569, 672, 930
Sau3AI	GATC	4 cut(s)	721, 762, 1801, 1819
Sau96I	GGNCC	3 cut(s)	252, 1087, 1330
ScaI	AGTACT	2 cut(s)	1279, 1313
SchI	GAGTC	1 cut(s)	1245
ScrFI	CCNGG	2 cut(s)	344, 409
SduI	GDGCHC	1 cut(s)	1458
SfaNI	GCATC	2 cut(s)	717, 1176
SfcI	CTRYAG	1 cut(s)	1297
Sfr274I	CTCGAG	1 cut(s)	1009
SfuI	TTCGAA	2 cut(s)	98, 188
SinI	GGWCC	1 cut(s)	1330
SlaI	CTCGAG	1 cut(s)	1009
SmiMI	CAYNNNNRTG	1 cut(s)	621
SmlI	CTYRAG	2 cut(s)	869, 1009
SmoI	CTYRAG	2 cut(s)	869, 1009
SnaBI	TACGTA	2 cut(s)	351, 1615
SphI	GCATGC	2 cut(s)	317, 1648
SsiI	CCGC	7 cut(s)	77, 288, 690, 1070, 1081, 1132, 1479
SspMI	CTAG	5 cut(s)	698, 971, 1271, 1283, 1848
StyD4I	CCNGG	2 cut(s)	342, 407
StyI	CCWWGG	1 cut(s)	1270
TaaI	ACNGT	9 cut(s)	433, 856, 912, 1048, 1298, 1510, 1736, 1783, 1845
TaiI	ACGT	5 cut(s)	31, 353, 1020, 1617, 1657
TaqI	TCGA	5 cut(s)	73, 98, 188, 1010, 1245
TaqII	GACCGA	2 cut(s)	267, 1231
TatI	WGTACW	3 cut(s)	1277, 1311, 1388
TfiI	GAWTC	1 cut(s)	1528
Tru1I	TTAA	4 cut(s)	465, 569, 672, 930
Tru9I	TTAA	4 cut(s)	465, 569, 672, 930
TscAI	CASTG	5 cut(s)	692, 772, 861, 1099, 1786
TspDTI	ATGAA	8 cut(s)	150, 438, 605, 946, 1139, 1208, 1464, 1736
TspRI	CASTG	5 cut(s)	692, 772, 861, 1099, 1786
Van91I	CCANNNNNTGG	1 cut(s)	32
VpaK11BI	GGWCC	1 cut(s)	1330
VspI	ATTAAT	1 cut(s)	465
XagI	CCTNNNNNAGG	1 cut(s)	1094
XapI	RAATTY	8 cut(s)	100, 133, 184, 215, 571, 612, 1195, 1421
XceI	RCATGY	4 cut(s)	317, 1494, 1648, 1797
XhoI	CTCGAG	1 cut(s)	1009
XmaJI	CCTAGG	1 cut(s)	1270
XmnI	GAANNNNTTC	1 cut(s)	1509
XspI	CTAG	5 cut(s)	698, 971, 1271, 1283, 1848
ZrmI	AGTACT	2 cut(s)	1279, 1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.