Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0013167

Physical Location & Seq

Genomic Coordinates Reverse (-)

37626229 .. 37635307

Gene Structure 9079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGTCGCAGTCACTGGAGCTTTTGCTGATACAATTCCTGATGCCGGACAACGACGCCCGGCGGCAGGCGGAGGACCAGATAAAGCGGTTGGCCAAGGACCCTCAGGTGGTTCCTGCGCTCGTACAACACCTCCGCACCGCCAAGACGCCGAACGTGCGGCAATTGGCCGCCGTGCTTTTGAGGAAGAAGATCACTGGACACTGGGCCAAGCTCTCTCCTCAGAGTAAACACCTCGTTAAGCAGTCCCTCATTGAGAGCATCACAATGGAGAACAGTCCGCCGGTGAGGCGAGCCAGTGCCAATGTGGTTAGCGTCGTTGCAAAATATGCGGTCCCGGCTGGAGAATGGCCGGATTTGTTGCCCTTTCTGTTTCAATGTAGTCAGAGTGCACAGGAAGAACATAGAGAGGTGGCATTGATCCTGTTCAGCTCTTTGACTGAAACAATAGGGAATACTTTTCGGCCACATTTCGCAGATTTGCAAGCTCTTCTCTTGAAATGCCTGCAGGATGAGACAAGCAACCGCGTCAGAGTTGCTGCACTCAAGGCTGTAGGGTCTTTTCTGGAATTCACTCATGATGGGGTTGAAGTGGTGAAGTTTCGAGAATTCATACCCAGCATCTTAAATGTTTCAAGACAATGCCTTGCAGCCGGCGAGGAGGATGTTGCTATTATTGCTTTTGAAATTTTTGATGAGTTGATTGAATCTCCCGCACCTCTTCTTGGGGAATCTGTTAAATCCATTGTGCAATTCTCTCTTGAAGTATGCTCTAGTCAAAGTTTAGAATCTAATACACGTCATCAGGCAGTTCAGATAGTTTCATGGCTAGCAAAGTATAAATCCAATTCCCTCAAAAAGCATAAGCTGGTCATCCCTATTCTGCAAGTTATGTGCCCATTACTCGCGGAATCAAATGATGAAGATAAGGATGATGATCTTGCTCCAGATCGGGCTGCTGCAGAAGTTATTGATACTATGGCCTTGAACATACCAAAGCATGTTTTCCACCCTGTCTTTGAATTTTCTTCTTTAAGCAGTCAAAATGCAAATCCAAAATATCGGGAAGCATCTGTTACTGCTTTAGGTGTCATTTCAGAGGGTTGTTTGGAGATGATAAAAGATAAGTTGGATCCAGTTCTTCATATTGTTTTAGGCGCTCTGAGAGATCCTGAGGAAATGGTTAGGGGGGCTGCATCATTTGCATTGGGTCAGTTTGCGGAGCATTTGCAGCCTGAAATTGTTTCCCACTATCAAAGTGTGCTTCCTTGCATTTTGAATGCCCTCGAGGATGCATCTGACGAAGTGAAGGAGAAGTCATATTATGCTTTGGCGGCATTTTGTGACAACATGGGTGAGGAAATTCTTCCATTCCTTGATCCATTGATGGGAAAACTACTGGGGGCCCTCCATAATAGCCCTCGTAATTTGCAGGAGACGTGCATGTCTGCGATTGGTTCAGTTGCATCTGCCTCCGAACAGGCATTCGTTCCATATGCTGAAGGGGTTTTGGAGTTGATGAAAAATTTCTTGGTGCTTAGTAATGATGAGGATCGTCGTTCACGAGCAAGAGCTACTGAATTAGTTGGAATAGTTGCAATGTGTGTGGGGAGAACTAGGATGGAACCAATTTTACCCCCTTATATAGAAGCTGCAATTTCTGGTTTTGGATTGGAATTCAGTGAACTTCGGGAGTATATTCATGGATTCTTCAGCAATGTGTCAGAAATTTTGGATGATGGCTTTATACAGTATCTTCCTCATGTCGTACCCCTGGCGTTTTCTTCGTGCAATCTTGATGATGGAGCTGCAGTGGACATCGATGAGTCTGATGATGAAAACATTAATGGATTTGGTGGAGTTTCATCTGATGATGAAGCTCATGATGAGCCAAGAGTACGAAATATCAGCGTAAGAACAGGAGTTTTAGATGAAAAAGCAGCTGCAACTCAAGCTCTTGGCTTATTTGCACTACATACGAAGGCCTCATATGCACCCTATTTGGAGGAATCATTAAAGATCCTAGTACGACACTCAGGGTATTTCCATGAAGATGTTCGGCTACAAGCAATCATTTCACTGAAACATATTTTAACAGCAGCACAGGCAGTTTACCAGAATCATAATGAAGGACAAGCAAGGGCTAAGGAAATCCTGGATACTGTGATGAATACTTATATCAAGACTATGACTGAAGATGATGACAAGGAAGTTGTTGCTCAAGCTTGTATGAGCCTTGCTGATATCATCAAAGATTATGGATATATGGTTGTTGAGCCTTATGTACCACGGGTTGTTGATGCTACTCTGGTACTGCTTCGGGAGGAATCAGCTTGTCAGCAGACAGAATCCGATGATGAAATTGAGGACGATGATGTTGTACATGATGAAGAACTTATGGACGCAGTTTCTGACCTTCTTCCTGCTTTTGCGAAGTCAATGGGTCCTCATTTTGCACCTATTTTTGCTAGGCTATTTGAACCTTTAATGAAATTCGCGAGAGCTTCACGGCCATTGCAAGATCGGACAATGGTTGTTGCCTGCCTTGCTGAAGTCGCTCAAGACATGGGTGCTCCAATTGCTGGATACGTCAATAGGGTGATGCCCTTGGTAATCAAAGAACTAGCATCATCAGATGCCACCAATAGAAGGAATGCTGCTTTTTGTGTTGGAGAGTTCTGTAAAAATGGGGGCGAAGGGACGTTGAAATACTATGGTGATATATTGCGTGGACTTTACCCACTATTTGGGGAATCTGAGCCAGATGATGCCGTCAGGGATAACGCAGCTGGTGCAGTGGCAAGGATGATAATGGTGCACCCTGAATCTATCCCATTGAATCAGGTACTTCCTGTTTTCTTGAAGGCTCTTCCACTAAAAGAAGATCGTGAAGAGTCCATGGCAGTGTATAGTTGCATCTGTACTCTTGTTTTGTCATCAAATGCTCCGATCCTTTCTCTAGTCCCTGAATTGATTAATGTATTTGCTCAAGTTGTGGCATCTCCGGTTGAAACTCCTGAAGTAAAAGCACAAATCGGAAGAGCTTTTTCTCACCTGATTTCCCTCTATGGCCATCAAATGCAGCCCCTTTTGAGTAACCTCTCCCCTGCTTATGCAAATGCCCTAGCTGCATTTGTCCCGAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0017038 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061608 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT IBN_N Vac14_Fab1_bd

Protein Analysis

1049

Amino Acids

115.37

Weight (kDa)

4.91

Isoelectric Point (pI)

51.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	23 - 87	4.5e-15	Importin-beta N-terminal domain
TPR_IPO5	PF25780	92 - 251	4.2e-33	IPO5-like, TPR repeats
HEAT_GCN1	PF23271	271 - 447	1.8e-06	Stalled ribosome sensor GCN1-like, HEAT repeats
TOR1L1_N	PF24714	317 - 532	3.2e-09	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	351 - 405	5.1e-06	HEAT-like repeat
TPR_IMB1	PF25574	370 - 516	1.6e-10	Importin subunit beta-1-like, TPR repeats
HEAT_GCN1	PF23271	401 - 546	1e-05	Stalled ribosome sensor GCN1-like, HEAT repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27640
fragaria_vesca	FvH4_5g29150
malus_domestica	MD08G1233900.v1.1 MD08G1234100.v1.1 MD15G1425400.v1.1
prunus_persica	Prupe.1G571100_v2.0.a1 Prupe.1G571100_v2.0.a1
pyrus_communis	pycom08g20240 pycom15g37710
rosa_chinensis	RchiOBHm_Chr7g0221821
rosa_laevigata	RLG00000002119
rosa_multiflora	Rmu_sc0005834.1_g000014
rosa_roxburghii	Rroxscaffold_3G00237670
rosa_rugosa	Rorug07G0203600
rosa_samantha	Rh7BG335300 Rh7CG362100 Rh7DG342400
rosa_wichuraiana	Rw7G029220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1441
AbsI	CCTCGAGG	1 cut(s)	1283
AccB7I	CCANNNNNTGG	2 cut(s)	2579, 2744
AccII	CGCG	3 cut(s)	525, 905, 2495
AclWI	GGATC	8 cut(s)	412, 1124, 1137, 1160, 1370, 1557, 2011, 2941
AcoI	YGGCCR	6 cut(s)	90, 165, 347, 461, 2507, 3067
AcsI	RAATTY	9 cut(s)	566, 605, 684, 1019, 1359, 1522, 1673, 1725, 2489
AcuI	CTGAAG	5 cut(s)	1518, 1693, 2211, 2568, 3036
AcyI	GRCGYC	2 cut(s)	54, 146
AfaI	GTAC	9 cut(s)	123, 1767, 1896, 2025, 2283, 2310, 2379, 2844, 2920
AfiI	CCNNNNNNNGG	8 cut(s)	43, 64, 106, 722, 1385, 2579, 2646, 2744
AflIII	ACRYGT	1 cut(s)	794
AjiI	CACGTC	2 cut(s)	797, 1437
AjnI	CCWGG	2 cut(s)	1770, 2151
AjuI	GAANNNNNNNTTGG	2 cut(s)	1511, 1543
Alw21I	GWGCWC	3 cut(s)	391, 2572, 2817
Alw26I	GTCTC	2 cut(s)	506, 1427
Alw44I	GTGCAC	2 cut(s)	387, 2813
AlwI	GGATC	8 cut(s)	412, 1124, 1137, 1160, 1370, 1557, 2011, 2941
AlwNI	CAGNNNCTG	2 cut(s)	13, 2408
Ama87I	CYCGRG	1 cut(s)	1283
ApaI	GGGCCC	1 cut(s)	1405
ApaLI	GTGCAC	2 cut(s)	387, 2813
ApoI	RAATTY	9 cut(s)	566, 605, 684, 1019, 1359, 1522, 1673, 1725, 2489
AseI	ATTAAT	2 cut(s)	1842, 2973
Asp700I	GAANNNNTTC	3 cut(s)	1362, 1523, 2052
AspLEI	GCGC	2 cut(s)	118, 1157
AspS9I	GGNCC	7 cut(s)	73, 97, 204, 331, 1401, 1402, 2441
AsuC2I	CCSGG	2 cut(s)	58, 335
AsuHPI	GGTGA	6 cut(s)	295, 604, 1364, 2608, 2726, 3041
AsuNHI	GCTAGC	1 cut(s)	826
AvaI	CYCGRG	1 cut(s)	1283
AvaII	GGWCC	4 cut(s)	73, 97, 331, 2441
AxyI	CCTNAGG	2 cut(s)	102, 1170
BaeGI	GKGCMC	4 cut(s)	391, 896, 1405, 2817
BalI	TGGCCA	2 cut(s)	92, 3069
BamHI	GGATCC	1 cut(s)	1129
BanII	GRGCYC	1 cut(s)	1405
BauI	CACGAG	1 cut(s)	1560
Bbv12I	GWGCWC	3 cut(s)	391, 2572, 2817
BccI	CCATC	6 cut(s)	572, 1378, 1612, 1730, 1793, 3078
BceAI	ACGGC	3 cut(s)	155, 2522, 2753
BciT130I	CCWGG	2 cut(s)	1772, 2153
BciVI	GTATCC	2 cut(s)	2149, 2576
BcnI	CCSGG	2 cut(s)	58, 335
BcoDI	GTCTC	2 cut(s)	506, 1427
BfaI	CTAG	8 cut(s)	771, 827, 1614, 2021, 2466, 2621, 2957, 3122
BfmI	CTRYAG	4 cut(s)	503, 549, 957, 1806
BfoI	RGCGCY	1 cut(s)	1158
BfuI	GTATCC	2 cut(s)	2149, 2576
BglI	GCCNNNNNGGC	1 cut(s)	286
Bme1390I	CCNGG	4 cut(s)	58, 335, 1772, 2153
Bme18I	GGWCC	4 cut(s)	73, 97, 331, 2441
BmeT110I	CYCGRG	1 cut(s)	1283
BmgBI	CACGTC	2 cut(s)	797, 1437
BmgT120I	GGNCC	7 cut(s)	73, 97, 204, 331, 1401, 1402, 2441
BmiI	GGNNCC	8 cut(s)	99, 111, 333, 1131, 1402, 1403, 1623, 2442
BmrFI	CCNGG	4 cut(s)	58, 335, 1772, 2153
BmrI	ACTGGG	2 cut(s)	211, 1406
BmtI	GCTAGC	1 cut(s)	830
BmuI	ACTGGG	2 cut(s)	211, 1406
BpmI	CTGGAG	3 cut(s)	35, 360, 927
Bpu10I	CCTNAGC	1 cut(s)	2142
BpuEI	CTTGAG	5 cut(s)	527, 1932, 2202, 2541, 2970
BpuMI	CCSGG	2 cut(s)	58, 335
Bsa29I	ATCGAT	1 cut(s)	1818
BsaBI	GATNNNNATC	2 cut(s)	933, 1548
BsaHI	GRCGYC	2 cut(s)	54, 146
BsaJI	CCNNGG	5 cut(s)	93, 1770, 2285, 2604, 2895
BsaWI	WCCGGW	1 cut(s)	3001
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 1794, 1824
Bsc4I	CCNNNNNNNGG	8 cut(s)	43, 64, 106, 722, 1385, 2579, 2646, 2744
Bse118I	RCCGGY	2 cut(s)	280, 650
Bse1I	ACTGG	6 cut(s)	18, 199, 206, 294, 1133, 1401
Bse21I	CCTNAGG	2 cut(s)	102, 1170
Bse3DI	GCAATG	3 cut(s)	1602, 1720, 2510
Bse8I	GATNNNNATC	2 cut(s)	933, 1548
BseBI	CCWGG	2 cut(s)	1772, 2153
BseCI	ATCGAT	1 cut(s)	1818
BseDI	CCNNGG	5 cut(s)	93, 1770, 2285, 2604, 2895
BseGI	GGATG	8 cut(s)	514, 667, 870, 934, 1294, 1623, 1738, 2808
BseJI	GATNNNNATC	2 cut(s)	933, 1548
BseLI	CCNNNNNNNGG	8 cut(s)	43, 64, 106, 722, 1385, 2579, 2646, 2744
BseMI	GCAATG	3 cut(s)	1602, 1720, 2510
BseMII	CTCAG	6 cut(s)	116, 233, 1151, 1161, 2046, 2745
BseNI	ACTGG	6 cut(s)	18, 199, 206, 294, 1133, 1401
BseRI	GAGGAG	2 cut(s)	207, 671
BseSI	GKGCMC	4 cut(s)	391, 896, 1405, 2817
BseYI	CCCAGC	1 cut(s)	614
BsgI	GTGCAG	2 cut(s)	522, 2811
Bsh1236I	CGCG	3 cut(s)	525, 905, 2495
BshVI	ATCGAT	1 cut(s)	1818
BsiHKAI	GWGCWC	3 cut(s)	391, 2572, 2817
BsiHKCI	CYCGRG	1 cut(s)	1283
BsiSI	CCGG	7 cut(s)	44, 58, 281, 335, 350, 651, 3002
BslFI	GGGAC	5 cut(s)	229, 317, 2710, 2945, 3119
BslI	CCNNNNNNNGG	8 cut(s)	43, 64, 106, 722, 1385, 2579, 2646, 2744
BsmAI	GTCTC	2 cut(s)	506, 1427
BsmBI	CGTCTC	1 cut(s)	1427
BsmFI	GGGAC	5 cut(s)	229, 317, 2710, 2945, 3119
BsmI	GAATGC	3 cut(s)	1282, 1481, 2656
BsoBI	CYCGRG	1 cut(s)	1283
Bsp120I	GGGCCC	1 cut(s)	1401
Bsp1286I	GDGCHC	5 cut(s)	391, 896, 1405, 2572, 2817
Bsp1407I	TGTACA	1 cut(s)	2377
Bsp19I	CCATGG	1 cut(s)	2895
Bsp68I	TCGCGA	1 cut(s)	2495
BspCNI	CTCAG	6 cut(s)	115, 232, 1152, 1162, 2045, 2746
BspDI	ATCGAT	1 cut(s)	1818
BspFNI	CGCG	3 cut(s)	525, 905, 2495
BspHI	TCATGA	2 cut(s)	574, 1879
BspLI	GGNNCC	8 cut(s)	99, 111, 333, 1131, 1402, 1403, 1623, 2442
BspMAI	CTGCAG	3 cut(s)	507, 961, 1810
BspOI	GCTAGC	1 cut(s)	830
BspPI	GGATC	8 cut(s)	412, 1124, 1137, 1160, 1370, 1557, 2011, 2941
BspQI	GCTCTTC	3 cut(s)	492, 2871, 3031
BsrDI	GCAATG	3 cut(s)	1602, 1720, 2510
BsrFI	RCCGGY	2 cut(s)	280, 650
BsrGI	TGTACA	1 cut(s)	2377
BsrI	ACTGG	6 cut(s)	18, 199, 206, 294, 1133, 1401
BssAI	RCCGGY	2 cut(s)	280, 650
BssECI	CCNNGG	5 cut(s)	93, 1770, 2285, 2604, 2895
BssNI	GRCGYC	2 cut(s)	54, 146
BssSI	CACGAG	1 cut(s)	1560
BssT1I	CCWWGG	3 cut(s)	93, 2604, 2895
Bst2BI	CACGAG	1 cut(s)	1560
Bst2UI	CCWGG	2 cut(s)	1772, 2153
Bst4CI	ACNGT	3 cut(s)	275, 1749, 2161
Bst6I	CTCTTC	5 cut(s)	492, 723, 2871, 2883, 3031
BstACI	GRCGYC	2 cut(s)	54, 146
BstAPI	GCANNNNNTGC	3 cut(s)	326, 1199, 2789
BstAUI	TGTACA	1 cut(s)	2377
BstC8I	GCNNGC	7 cut(s)	66, 291, 483, 503, 652, 828, 2539
BstDEI	CTNAG	8 cut(s)	102, 219, 1160, 1170, 1535, 2032, 2142, 2754
BstDSI	CCRYGG	2 cut(s)	2285, 2895
BstF5I	GGATG	8 cut(s)	514, 667, 870, 934, 1294, 1623, 1738, 2808
BstFNI	CGCG	3 cut(s)	525, 905, 2495
BstH2I	RGCGCY	1 cut(s)	1158
BstHHI	GCGC	2 cut(s)	118, 1157
BstMAI	GTCTC	2 cut(s)	506, 1427
BstNI	CCWGG	2 cut(s)	1772, 2153
BstNSI	RCATGY	2 cut(s)	1001, 1444
BstSCI	CCNGG	4 cut(s)	56, 333, 1770, 2151
BstSFI	CTRYAG	4 cut(s)	503, 549, 957, 1806
BstSLI	GKGCMC	4 cut(s)	391, 896, 1405, 2817
BstUI	CGCG	3 cut(s)	525, 905, 2495
BstX2I	RGATCY	3 cut(s)	1129, 1165, 2016
BstYI	RGATCY	3 cut(s)	1129, 1165, 2016
Bsu15I	ATCGAT	1 cut(s)	1818
Bsu36I	CCTNAGG	2 cut(s)	102, 1170
BsuI	GTATCC	2 cut(s)	2149, 2576
BsuTUI	ATCGAT	1 cut(s)	1818
BtgI	CCRYGG	2 cut(s)	2285, 2895
BtrI	CACGTC	2 cut(s)	797, 1437
BtsCI	GGATG	8 cut(s)	514, 667, 870, 934, 1294, 1623, 1738, 2808
BtsI	GCAGTG	3 cut(s)	1815, 2799, 2907
BtsIMutI	CAGTG	9 cut(s)	11, 192, 199, 301, 1684, 1815, 2075, 2799, 2907
BtuMI	TCGCGA	1 cut(s)	2495
Cac8I	GCNNGC	7 cut(s)	66, 291, 483, 503, 652, 828, 2539
CaiI	CAGNNNCTG	2 cut(s)	13, 2408
CciI	TCATGA	2 cut(s)	574, 1879
CfoI	GCGC	2 cut(s)	118, 1157
Cfr10I	RCCGGY	2 cut(s)	280, 650
Cfr13I	GGNCC	7 cut(s)	73, 97, 204, 331, 1401, 1402, 2441
ClaI	ATCGAT	1 cut(s)	1818
CseI	GACGC	5 cut(s)	62, 154, 301, 514, 2408
Csp6I	GTAC	9 cut(s)	122, 1766, 1895, 2024, 2282, 2309, 2378, 2843, 2919
CspCI	CAANNNNNGTGG	2 cut(s)	1584, 1619
CviQI	GTAC	9 cut(s)	122, 1766, 1895, 2024, 2282, 2309, 2378, 2843, 2919
DdeI	CTNAG	8 cut(s)	102, 219, 1160, 1170, 1535, 2032, 2142, 2754
DrdI	GACNNNNNNGTC	1 cut(s)	1441
DseDI	GACNNNNNNGTC	1 cut(s)	1441
EaeI	YGGCCR	6 cut(s)	90, 165, 347, 461, 2507, 3067
Eam1104I	CTCTTC	5 cut(s)	492, 723, 2871, 2883, 3031
EarI	CTCTTC	5 cut(s)	492, 723, 2871, 2883, 3031
EciI	GGCGGA	2 cut(s)	83, 267
Eco130I	CCWWGG	3 cut(s)	93, 2604, 2895
Eco147I	AGGCCT	1 cut(s)	1982
Eco24I	GRGCYC	1 cut(s)	1405
Eco32I	GATATC	1 cut(s)	2242
Eco47I	GGWCC	4 cut(s)	73, 97, 331, 2441
Eco57I	CTGAAG	5 cut(s)	1518, 1693, 2211, 2568, 3036
Eco81I	CCTNAGG	2 cut(s)	102, 1170
Eco88I	CYCGRG	1 cut(s)	1283
EcoO109I	RGGNCCY	4 cut(s)	97, 1401, 1402, 2441
EcoRI	GAATTC	3 cut(s)	566, 605, 1673
EcoRII	CCWGG	2 cut(s)	1770, 2151
EcoRV	GATATC	1 cut(s)	2242
EcoT14I	CCWWGG	3 cut(s)	93, 2604, 2895
EcoT22I	ATGCAT	1 cut(s)	1294
EcoT38I	GRGCYC	1 cut(s)	1405
ErhI	CCWWGG	3 cut(s)	93, 2604, 2895
Esp3I	CGTCTC	1 cut(s)	1427
FaqI	GGGAC	5 cut(s)	229, 317, 2710, 2945, 3119
FauI	CCCGC	1 cut(s)	718
FauNDI	CATATG	2 cut(s)	1492, 1987
FokI	GGATG	8 cut(s)	521, 674, 857, 941, 1301, 1630, 1745, 2815
FriOI	GRGCYC	1 cut(s)	1405
FspBI	CTAG	8 cut(s)	771, 827, 1614, 2021, 2466, 2621, 2957, 3122
GlaI	GCGC	2 cut(s)	117, 1156
GsaI	CCCAGC	1 cut(s)	618
GsuI	CTGGAG	3 cut(s)	35, 360, 927
HaeII	RGCGCY	1 cut(s)	1158
HapII	CCGG	7 cut(s)	44, 58, 281, 335, 350, 651, 3002
HgaI	GACGC	5 cut(s)	62, 154, 301, 514, 2408
HhaI	GCGC	2 cut(s)	118, 1157
Hin1I	GRCGYC	2 cut(s)	54, 146
Hin6I	GCGC	2 cut(s)	116, 1155
HinP1I	GCGC	2 cut(s)	116, 1155
HindIII	AAGCTT	1 cut(s)	2220
HpaII	CCGG	7 cut(s)	44, 58, 281, 335, 350, 651, 3002
HphI	GGTGA	6 cut(s)	295, 604, 1364, 2608, 2726, 3041
Hpy166II	GTNNAC	8 cut(s)	227, 389, 1559, 1682, 1813, 2110, 2729, 2815
Hpy8I	GTNNAC	8 cut(s)	227, 389, 1559, 1682, 1813, 2110, 2729, 2815
Hpy99I	CGWCG	3 cut(s)	56, 317, 1557
HpyAV	CCTTC	8 cut(s)	1300, 1493, 1972, 2120, 2423, 2640, 2687, 2854
HpyCH4III	ACNGT	3 cut(s)	275, 1749, 2161
HpyCH4IV	ACGT	5 cut(s)	153, 796, 1436, 2586, 2699
HpyF3I	CTNAG	8 cut(s)	102, 219, 1160, 1170, 1535, 2032, 2142, 2754
HpySE526I	ACGT	5 cut(s)	153, 796, 1436, 2586, 2699
Hsp92I	GRCGYC	2 cut(s)	54, 146
HspAI	GCGC	2 cut(s)	116, 1155
KroI	GCCGGC	1 cut(s)	650
KroNI	GCCGGC	1 cut(s)	652
LguI	GCTCTTC	3 cut(s)	492, 2871, 3031
LmnI	GCTCC	6 cut(s)	16, 946, 1219, 1802, 2575, 2947
MaeI	CTAG	8 cut(s)	771, 827, 1614, 2021, 2466, 2621, 2957, 3122
MaeII	ACGT	5 cut(s)	153, 796, 1436, 2586, 2699
MaeIII	GTNAC	4 cut(s)	9, 1072, 1340, 3092
MfeI	CAATTG	2 cut(s)	161, 2574
MflI	RGATCY	3 cut(s)	1129, 1165, 2016
MhlI	GDGCHC	5 cut(s)	391, 896, 1405, 2572, 2817
MlsI	TGGCCA	2 cut(s)	92, 3069
MluNI	TGGCCA	2 cut(s)	92, 3069
MlyI	GAGTC	2 cut(s)	1832, 2900
MmeI	TCCRAC	3 cut(s)	1107, 1564, 2647
Mox20I	TGGCCA	2 cut(s)	92, 3069
Mph1103I	ATGCAT	1 cut(s)	1294
MroNI	GCCGGC	1 cut(s)	650
MroXI	GAANNNNTTC	3 cut(s)	1362, 1523, 2052
MscI	TGGCCA	2 cut(s)	92, 3069
MseI	TTAA	9 cut(s)	237, 623, 735, 1031, 1842, 2012, 2090, 2483, 2973
MslI	CAYNNNNRTG	3 cut(s)	263, 2049, 2900
Msp20I	TGGCCA	2 cut(s)	92, 3069
MspA1I	CMGCKG	2 cut(s)	1940, 2786
MspI	CCGG	7 cut(s)	44, 58, 281, 335, 350, 651, 3002
MspR9I	CCNGG	4 cut(s)	58, 335, 1772, 2153
MunI	CAATTG	2 cut(s)	161, 2574
Mva1269I	GAATGC	3 cut(s)	1282, 1481, 2656
MvaI	CCWGG	2 cut(s)	1772, 2153
MvnI	CGCG	3 cut(s)	525, 905, 2495
NaeI	GCCGGC	1 cut(s)	652
NciI	CCSGG	2 cut(s)	58, 335
NcoI	CCATGG	1 cut(s)	2895
NdeI	CATATG	2 cut(s)	1492, 1987
NgoMIV	GCCGGC	1 cut(s)	650
NheI	GCTAGC	1 cut(s)	826
NlaIV	GGNNCC	8 cut(s)	99, 111, 333, 1131, 1402, 1403, 1623, 2442
NmuCI	GTSAC	2 cut(s)	9, 1340
NruI	TCGCGA	1 cut(s)	2495
NsiI	ATGCAT	1 cut(s)	1294
NspI	RCATGY	2 cut(s)	1001, 1444
PaeR7I	CTCGAG	1 cut(s)	1283
PagI	TCATGA	2 cut(s)	574, 1879
PceI	AGGCCT	1 cut(s)	1982
PciSI	GCTCTTC	3 cut(s)	492, 2871, 3031
PcsI	WCGNNNNNNNCGW	1 cut(s)	1558
PctI	GAATGC	3 cut(s)	1282, 1481, 2656
PdiI	GCCGGC	1 cut(s)	652
PdmI	GAANNNNTTC	3 cut(s)	1362, 1523, 2052
PflMI	CCANNNNNTGG	2 cut(s)	2579, 2744
PfoI	TCCNGGA	1 cut(s)	2151
PleI	GAGTC	2 cut(s)	1831, 2899
PpsI	GAGTC	2 cut(s)	1831, 2899
PpuMI	RGGWCCY	2 cut(s)	97, 2441
PshBI	ATTAAT	2 cut(s)	1842, 2973
Psp5II	RGGWCCY	2 cut(s)	97, 2441
Psp6I	CCWGG	2 cut(s)	1770, 2151
PspFI	CCCAGC	1 cut(s)	614
PspGI	CCWGG	2 cut(s)	1770, 2151
PspN4I	GGNNCC	8 cut(s)	99, 111, 333, 1131, 1402, 1403, 1623, 2442
PspOMI	GGGCCC	1 cut(s)	1401
PspPI	GGNCC	7 cut(s)	73, 97, 204, 331, 1401, 1402, 2441
PspPPI	RGGWCCY	2 cut(s)	97, 2441
PspXI	VCTCGAGB	1 cut(s)	1283
PsrI	GAACNNNNNNTAC	2 cut(s)	1614, 1646
PstI	CTGCAG	3 cut(s)	507, 961, 1810
PstNI	CAGNNNCTG	2 cut(s)	13, 2408
PsuI	RGATCY	3 cut(s)	1129, 1165, 2016
PvuII	CAGCTG	2 cut(s)	1940, 2786
RruI	TCGCGA	1 cut(s)	2495
RsaI	GTAC	9 cut(s)	123, 1767, 1896, 2025, 2283, 2310, 2379, 2844, 2920
RsaNI	GTAC	9 cut(s)	122, 1766, 1895, 2024, 2282, 2309, 2378, 2843, 2919
RseI	CAYNNNNRTG	3 cut(s)	263, 2049, 2900
SapI	GCTCTTC	3 cut(s)	492, 2871, 3031
SaqAI	TTAA	9 cut(s)	237, 623, 735, 1031, 1842, 2012, 2090, 2483, 2973
Sau96I	GGNCC	7 cut(s)	73, 97, 204, 331, 1401, 1402, 2441
SbfI	CCTGCAGG	1 cut(s)	507
SchI	GAGTC	2 cut(s)	1832, 2900
ScrFI	CCNGG	4 cut(s)	58, 335, 1772, 2153
SdaI	CCTGCAGG	1 cut(s)	507
SduI	GDGCHC	5 cut(s)	391, 896, 1405, 2572, 2817
SfcI	CTRYAG	4 cut(s)	503, 549, 957, 1806
Sfr274I	CTCGAG	1 cut(s)	1283
SgrAI	CRCCGGYG	1 cut(s)	280
SinI	GGWCC	4 cut(s)	73, 97, 331, 2441
SlaI	CTCGAG	1 cut(s)	1283
SmiMI	CAYNNNNRTG	3 cut(s)	263, 2049, 2900
SmlI	CTYRAG	6 cut(s)	542, 1283, 1947, 2217, 2556, 2985
SmoI	CTYRAG	6 cut(s)	542, 1283, 1947, 2217, 2556, 2985
Sse8387I	CCTGCAGG	1 cut(s)	507
SseBI	AGGCCT	1 cut(s)	1982
SspMI	CTAG	8 cut(s)	771, 827, 1614, 2021, 2466, 2621, 2957, 3122
StuI	AGGCCT	1 cut(s)	1982
StyD4I	CCNGG	4 cut(s)	56, 333, 1770, 2151
StyI	CCWWGG	3 cut(s)	93, 2604, 2895
TaaI	ACNGT	3 cut(s)	275, 1749, 2161
TaiI	ACGT	5 cut(s)	156, 799, 1439, 2589, 2702
TaqI	TCGA	3 cut(s)	601, 1284, 1818
TatI	WGTACW	2 cut(s)	2377, 2918
TauI	GCSGC	4 cut(s)	64, 160, 170, 1334
Tru1I	TTAA	9 cut(s)	237, 623, 735, 1031, 1842, 2012, 2090, 2483, 2973
Tru9I	TTAA	9 cut(s)	237, 623, 735, 1031, 1842, 2012, 2090, 2483, 2973
TscAI	CASTG	9 cut(s)	18, 199, 206, 301, 1684, 1815, 2082, 2799, 2907
TseFI	GTSAC	2 cut(s)	9, 1340
Tsp45I	GTSAC	2 cut(s)	9, 1340
TspRI	CASTG	9 cut(s)	18, 199, 206, 301, 1684, 1815, 2082, 2799, 2907
Van91I	CCANNNNNTGG	2 cut(s)	2579, 2744
VneI	GTGCAC	2 cut(s)	387, 2813
VpaK11BI	GGWCC	4 cut(s)	73, 97, 331, 2441
VspI	ATTAAT	2 cut(s)	1842, 2973
XapI	RAATTY	9 cut(s)	566, 605, 684, 1019, 1359, 1522, 1673, 1725, 2489
XceI	RCATGY	2 cut(s)	1001, 1444
XcmI	CCANNNNNNNNNTGG	1 cut(s)	301
XhoI	CTCGAG	1 cut(s)	1283
XmnI	GAANNNNTTC	3 cut(s)	1362, 1523, 2052
XspI	CTAG	8 cut(s)	771, 827, 1614, 2021, 2466, 2621, 2957, 3122
Zsp2I	ATGCAT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.