pycom16g05350

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0002060
Physical Location & Seq
Forward (+)
3470460 .. 3472264
1805 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1170 bp
ATGTGTGGTGCACCAGCAAAGACAGTGGGGTGGCGAGATCCTGGATTTATACACACTGCTTTTCTGAAGGAATTGTGGCCCAACACAGTGTACACCTACAAGGTTGGACACAGATTGCCAAATGGTTCCCATATTTTGAGTCAAGAATACAAGTTCAGAGCATCTCCATATCCTGGTCAAAATTCTGTTCAACGCGTTGTCATCTTCGGTGACATGGGAAAGGATGAAGCTGATGGATCCAATGAATATAACCAATACCAGCGTGGCTCTCTCAACACAACTAAGCAGCTAATCCAAGACTTAGAGAAAATTGATATCGTTTTCCACATTGGGGATATATGTTACGCAAATGGATACCTTTCGCAGTGGGACCAATTCACGGCACAGGTTGAGCCGATAGCATCTGCTGTTCCTTACATGATCGCAAGCGGTAATCATGAGCGTGACTGGCCAGGCTCAGGATCCTTCTATGGGACCACGGATTCAGGCGGGGAATGCGGTGTCTTGGCCCAGACCATGTTTTATGTCCCTGCTGAAAACAGGGCTAAGTTCTGGTATTCCACTGACTATGGCATGTTCCGGTTCTGCATTGCGGACACAGAACACGATTGGAGGGAGGGAACAGAGCAATACAAGTTCATTGAGGAGTGCCTAGCATCAGTCGATAGACAAAAGCAACCATGGCTGATCTTTCTGGCTCATCGGGTGCTAGGTTATTCTTCTGCAAGCTTTTATGTCGCCGAAGGATCATTTGAGGAACCAATGGGAAGGGAAAGCCTTCAGAAATTATGGCAGAAGTACAAAGTTGACCTCGCTGTATACGGCCATGTGCACAACTACGAAAGGAGTTGCCCCATTTATCAGAATATCTGCACCAGTAAGGAGCAGCACAATTACAAGGGTAACCTGAATGGCACGATACATGTGGTTGCTGGTGGCGGAGGAGCGAGTCTTGCAACCTTTGCTCCTGTTCAAACGGAATGGAGTATCTTCAAGGACTATGATTACGGGTTTATCAAACTGACAGCGTTTGATCGCTCGAACCTAATGTTCGAGTACAAGAAGAGCAGGGACGGAAAGGTCTACGATTCGTTCAGAATATCAAGGGAGTACAAGGACATCTTGGCCTGCTCTGTTGATAGTTGCCCGAGTACAACTCTGGCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

390

Amino Acids

44.22

Weight (kDa)

5.9

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 65 - 280 1.3e-18 Calcineurin-like phosphoesterase
Metallophos_C PF14008 305 - 364 1.2e-15 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1079
AccB7I CCANNNNNTGG 1 cut(s) 173
AccI GTMKAC 2 cut(s) 819, 1083
AccII CGCG 1 cut(s) 195
AciI CCGC 5 cut(s) 429, 489, 498, 593, 939
AclWI GGATC 6 cut(s) 32, 231, 244, 456, 469, 754
AcoI YGGCCR 2 cut(s) 449, 823
AcsI RAATTY 1 cut(s) 181
AcuI CTGAAG 2 cut(s) 86, 764
AfaI GTAC 5 cut(s) 92, 800, 1058, 1112, 1153
AfiI CCNNNNNNNGG 5 cut(s) 173, 331, 379, 458, 471
AflIII ACRYGT 2 cut(s) 193, 922
AgsI TTSAA 3 cut(s) 191, 974, 994
AjnI CCWGG 3 cut(s) 40, 172, 451
AluBI AGCT 3 cut(s) 230, 289, 729
AluI AGCT 3 cut(s) 230, 289, 729
Alw21I GWGCWC 2 cut(s) 13, 834
Alw44I GTGCAC 2 cut(s) 9, 830
AlwI GGATC 6 cut(s) 32, 231, 244, 456, 469, 754
Ama87I CYCGRG 1 cut(s) 1147
AoxI GGCC 5 cut(s) 77, 449, 507, 823, 1125
ApaLI GTGCAC 2 cut(s) 9, 830
ApeKI GCWGC 2 cut(s) 286, 886
ApoI RAATTY 1 cut(s) 181
Asp700I GAANNNNTTC 1 cut(s) 777
AspS9I GGNCC 4 cut(s) 78, 370, 474, 508
AsuHPI GGTGA 1 cut(s) 221
AvaI CYCGRG 1 cut(s) 1147
AvaII GGWCC 2 cut(s) 370, 474
BaeGI GKGCMC 2 cut(s) 13, 834
BalI TGGCCA 1 cut(s) 451
BamHI GGATCC 2 cut(s) 236, 461
Bbv12I GWGCWC 2 cut(s) 13, 834
BbvI GCAGC 2 cut(s) 298, 898
BccI CCATC 1 cut(s) 227
BceAI ACGGC 2 cut(s) 396, 838
BciT130I CCWGG 3 cut(s) 42, 174, 453
BciVI GTATCC 1 cut(s) 347
BfaI CTAG 2 cut(s) 653, 710
BfuI GTATCC 1 cut(s) 347
BisI GCNGC 2 cut(s) 287, 887
BlsI GCNGC 2 cut(s) 288, 888
Bme1390I CCNGG 3 cut(s) 42, 174, 453
Bme18I GGWCC 2 cut(s) 370, 474
BmeT110I CYCGRG 1 cut(s) 1147
BmgT120I GGNCC 4 cut(s) 78, 370, 474, 508
BmiI GGNNCC 6 cut(s) 127, 238, 371, 463, 475, 759
BmrFI CCNGG 3 cut(s) 42, 174, 453
BmsI GCATC 3 cut(s) 170, 410, 665
BplI GAGNNNNNCTC 1 cut(s) 1141
Bpu10I CCTNAGC 1 cut(s) 457
BsaJI CCNNGG 2 cut(s) 477, 680
BsaWI WCCGGW 1 cut(s) 579
BsaXI ACNNNNNCTCC 2 cut(s) 949, 979
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 331, 379, 458, 471
Bse1I ACTGG 2 cut(s) 452, 876
Bse3DI GCAATG 1 cut(s) 588
BseBI CCWGG 3 cut(s) 42, 174, 453
BseDI CCNNGG 2 cut(s) 477, 680
BseGI GGATG 1 cut(s) 229
BseLI CCNNNNNNNGG 5 cut(s) 173, 331, 379, 458, 471
BseMI GCAATG 1 cut(s) 588
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 2 cut(s) 452, 876
BseRI GAGGAG 2 cut(s) 659, 957
BseSI GKGCMC 2 cut(s) 13, 834
BseXI GCAGC 2 cut(s) 298, 898
BsgI GTGCAG 1 cut(s) 856
Bsh1236I CGCG 1 cut(s) 195
BshFI GGCC 5 cut(s) 79, 451, 509, 825, 1127
BsiHKAI GWGCWC 2 cut(s) 13, 834
BsiHKCI CYCGRG 1 cut(s) 1147
BsiSI CCGG 1 cut(s) 580
BslFI GGGAC 4 cut(s) 383, 487, 512, 1085
BslI CCNNNNNNNGG 5 cut(s) 173, 331, 379, 458, 471
BsmFI GGGAC 4 cut(s) 383, 487, 512, 1085
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 5 cut(s) 79, 451, 509, 825, 1127
BsoBI CYCGRG 1 cut(s) 1147
Bsp1286I GDGCHC 2 cut(s) 13, 834
Bsp1407I TGTACA 1 cut(s) 90
Bsp143I GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 5 cut(s) 429, 489, 498, 593, 939
BspANI GGCC 5 cut(s) 79, 451, 509, 825, 1127
BspCNI CTCAG 1 cut(s) 470
BspFNI CGCG 1 cut(s) 195
BspHI TCATGA 1 cut(s) 436
BspLI GGNNCC 6 cut(s) 127, 238, 371, 463, 475, 759
BspPI GGATC 6 cut(s) 32, 231, 244, 456, 469, 754
BspQI GCTCTTC 1 cut(s) 1058
BsrDI GCAATG 1 cut(s) 588
BsrGI TGTACA 1 cut(s) 90
BsrI ACTGG 2 cut(s) 452, 876
BssECI CCNNGG 2 cut(s) 477, 680
BssMI GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
BssNAI GTATAC 1 cut(s) 820
BssT1I CCWWGG 1 cut(s) 680
Bst1107I GTATAC 1 cut(s) 820
Bst2UI CCWGG 3 cut(s) 42, 174, 453
Bst4CI ACNGT 2 cut(s) 25, 88
Bst6I CTCTTC 1 cut(s) 1058
BstAPI GCANNNNNTGC 1 cut(s) 962
BstAUI TGTACA 1 cut(s) 90
BstC8I GCNNGC 3 cut(s) 427, 727, 1129
BstDEI CTNAG 4 cut(s) 282, 301, 457, 546
BstDSI CCRYGG 2 cut(s) 477, 680
BstEII GGTNACC 1 cut(s) 902
BstF5I GGATG 1 cut(s) 229
BstFNI CGCG 1 cut(s) 195
BstKTI GATC 7 cut(s) 40, 239, 423, 464, 690, 749, 1036
BstMBI GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
BstMWI GCNNNNNNNGC 5 cut(s) 448, 495, 682, 953, 962
BstNI CCWGG 3 cut(s) 42, 174, 453
BstNSI RCATGY 2 cut(s) 577, 926
BstPI GGTNACC 1 cut(s) 902
BstSCI CCNGG 3 cut(s) 40, 172, 451
BstSLI GKGCMC 2 cut(s) 13, 834
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 2 cut(s) 298, 898
BstX2I RGATCY 3 cut(s) 37, 236, 461
BstYI RGATCY 3 cut(s) 37, 236, 461
BstZ17I GTATAC 1 cut(s) 820
BsuI GTATCC 1 cut(s) 347
BsuRI GGCC 5 cut(s) 79, 451, 509, 825, 1127
BtgI CCRYGG 2 cut(s) 477, 680
BtsCI GGATG 1 cut(s) 229
BtsI GCAGTG 2 cut(s) 54, 371
BtsIMutI CAGTG 5 cut(s) 30, 54, 93, 371, 561
Cac8I GCNNGC 3 cut(s) 427, 727, 1129
CciI TCATGA 1 cut(s) 436
Cfr13I GGNCC 4 cut(s) 78, 370, 474, 508
Csp6I GTAC 5 cut(s) 91, 799, 1057, 1111, 1152
CspCI CAANNNNNGTGG 2 cut(s) 6, 41
CviAII CATG 8 cut(s) 214, 418, 437, 517, 574, 681, 827, 923
CviQI GTAC 5 cut(s) 91, 799, 1057, 1111, 1152
DdeI CTNAG 4 cut(s) 282, 301, 457, 546
DpnI GATC 7 cut(s) 39, 238, 422, 463, 689, 748, 1035
DpnII GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
DrdI GACNNNNNNGTC 1 cut(s) 1079
DseDI GACNNNNNNGTC 1 cut(s) 1079
EaeI YGGCCR 2 cut(s) 449, 823
Eam1104I CTCTTC 1 cut(s) 1058
EarI CTCTTC 1 cut(s) 1058
EciI GGCGGA 1 cut(s) 954
Eco130I CCWWGG 1 cut(s) 680
Eco32I GATATC 1 cut(s) 316
Eco47I GGWCC 2 cut(s) 370, 474
Eco57I CTGAAG 2 cut(s) 86, 764
Eco88I CYCGRG 1 cut(s) 1147
Eco91I GGTNACC 1 cut(s) 902
EcoO65I GGTNACC 1 cut(s) 902
EcoRII CCWGG 3 cut(s) 40, 172, 451
EcoRV GATATC 1 cut(s) 316
EcoT14I CCWWGG 1 cut(s) 680
ErhI CCWWGG 1 cut(s) 680
FaeI CATG 8 cut(s) 217, 421, 440, 520, 577, 684, 830, 926
FalI AAGNNNNNCTT 2 cut(s) 1106, 1138
FaqI GGGAC 4 cut(s) 383, 487, 512, 1085
FatI CATG 8 cut(s) 213, 417, 436, 516, 573, 680, 826, 922
FauI CCCGC 1 cut(s) 482
FblI GTMKAC 2 cut(s) 819, 1083
Fnu4HI GCNGC 2 cut(s) 287, 887
FokI GGATG 1 cut(s) 236
Fsp4HI GCNGC 2 cut(s) 287, 887
FspBI CTAG 2 cut(s) 653, 710
GluI GCNGC 2 cut(s) 287, 887
HaeIII GGCC 5 cut(s) 79, 451, 509, 825, 1127
HapII CCGG 1 cut(s) 580
Hin1II CATG 8 cut(s) 217, 421, 440, 520, 577, 684, 830, 926
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HindIII AAGCTT 1 cut(s) 727
HinfI GANTC 4 cut(s) 139, 482, 949, 1088
HpaII CCGG 1 cut(s) 580
HphI GGTGA 1 cut(s) 221
Hpy166II GTNNAC 7 cut(s) 11, 91, 93, 808, 820, 832, 1084
Hpy188I TCNGA 5 cut(s) 66, 158, 783, 864, 1097
Hpy188III TCNNGA 4 cut(s) 143, 437, 459, 1167
Hpy8I GTNNAC 7 cut(s) 11, 91, 93, 808, 820, 832, 1084
HpyAV CCTTC 5 cut(s) 61, 475, 737, 762, 788
HpyCH4III ACNGT 2 cut(s) 25, 88
HpyCH4V TGCA 6 cut(s) 11, 588, 725, 832, 873, 956
HpyF10VI GCNNNNNNNGC 5 cut(s) 448, 495, 682, 953, 962
HpyF3I CTNAG 4 cut(s) 282, 301, 457, 546
Hsp92II CATG 8 cut(s) 217, 421, 440, 520, 577, 684, 830, 926
Kzo9I GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
LguI GCTCTTC 1 cut(s) 1058
LmnI GCTCC 3 cut(s) 883, 944, 970
Lsp1109I GCAGC 2 cut(s) 298, 898
LweI GCATC 3 cut(s) 170, 410, 665
MaeI CTAG 2 cut(s) 653, 710
MaeIII GTNAC 4 cut(s) 209, 341, 443, 902
MalI GATC 7 cut(s) 39, 238, 422, 463, 689, 748, 1035
MboI GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
MboII GAAGA 4 cut(s) 196, 711, 982, 1075
MflI RGATCY 3 cut(s) 37, 236, 461
MhlI GDGCHC 2 cut(s) 13, 834
MlsI TGGCCA 1 cut(s) 451
MluCI AATT 6 cut(s) 71, 181, 309, 374, 785, 892
MluI ACGCGT 1 cut(s) 193
MluNI TGGCCA 1 cut(s) 451
MlyI GAGTC 2 cut(s) 148, 958
MmeI TCCRAC 1 cut(s) 85
MnlI CCTC 6 cut(s) 606, 610, 637, 748, 821, 935
Mox20I TGGCCA 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 777
MscI TGGCCA 1 cut(s) 451
MslI CAYNNNNRTG 1 cut(s) 441
Msp20I TGGCCA 1 cut(s) 451
MspI CCGG 1 cut(s) 580
MspR9I CCNGG 3 cut(s) 42, 174, 453
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 3 cut(s) 42, 174, 453
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 5 cut(s) 448, 495, 682, 953, 962
NcoI CCATGG 1 cut(s) 680
NdeII GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
NlaIII CATG 8 cut(s) 217, 421, 440, 520, 577, 684, 830, 926
NlaIV GGNNCC 6 cut(s) 127, 238, 371, 463, 475, 759
NmuCI GTSAC 2 cut(s) 209, 443
NspI RCATGY 2 cut(s) 577, 926
PagI TCATGA 1 cut(s) 436
PciI ACATGT 1 cut(s) 922
PciSI GCTCTTC 1 cut(s) 1058
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 777
PfeI GAWTC 2 cut(s) 482, 1088
PflMI CCANNNNNTGG 1 cut(s) 173
PfoI TCCNGGA 1 cut(s) 40
PkrI GCNGC 2 cut(s) 288, 888
PleI GAGTC 2 cut(s) 147, 957
PpsI GAGTC 2 cut(s) 147, 957
PscI ACATGT 1 cut(s) 922
Psp6I CCWGG 3 cut(s) 40, 172, 451
PspEI GGTNACC 1 cut(s) 902
PspGI CCWGG 3 cut(s) 40, 172, 451
PspN4I GGNNCC 6 cut(s) 127, 238, 371, 463, 475, 759
PspPI GGNCC 4 cut(s) 78, 370, 474, 508
PsuI RGATCY 3 cut(s) 37, 236, 461
RsaI GTAC 5 cut(s) 92, 800, 1058, 1112, 1153
RsaNI GTAC 5 cut(s) 91, 799, 1057, 1111, 1152
RseI CAYNNNNRTG 1 cut(s) 441
SapI GCTCTTC 1 cut(s) 1058
SatI GCNGC 2 cut(s) 287, 887
Sau3AI GATC 7 cut(s) 37, 236, 420, 461, 687, 746, 1033
Sau96I GGNCC 4 cut(s) 78, 370, 474, 508
SchI GAGTC 2 cut(s) 148, 958
ScrFI CCNGG 3 cut(s) 42, 174, 453
SduI GDGCHC 2 cut(s) 13, 834
SfaNI GCATC 3 cut(s) 170, 410, 665
SinI GGWCC 2 cut(s) 370, 474
SmiMI CAYNNNNRTG 1 cut(s) 441
Sse9I AATT 6 cut(s) 71, 181, 309, 374, 785, 892
SsiI CCGC 5 cut(s) 429, 489, 498, 593, 939
SspMI CTAG 2 cut(s) 653, 710
StyD4I CCNGG 3 cut(s) 40, 172, 451
StyI CCWWGG 1 cut(s) 680
TaaI ACNGT 2 cut(s) 25, 88
TaqI TCGA 3 cut(s) 663, 1040, 1053
TasI AATT 6 cut(s) 71, 181, 309, 374, 785, 892
TatI WGTACW 5 cut(s) 90, 798, 1056, 1110, 1151
TfiI GAWTC 2 cut(s) 482, 1088
TscAI CASTG 5 cut(s) 30, 61, 93, 371, 568
TseFI GTSAC 2 cut(s) 209, 443
TseI GCWGC 2 cut(s) 286, 886
Tsp45I GTSAC 2 cut(s) 209, 443
TspDTI ATGAA 3 cut(s) 240, 258, 628
TspGWI ACGGA 3 cut(s) 494, 992, 1089
TspRI CASTG 5 cut(s) 30, 61, 93, 371, 568
Van91I CCANNNNNTGG 1 cut(s) 173
VneI GTGCAC 2 cut(s) 9, 830
VpaK11BI GGWCC 2 cut(s) 370, 474
XapI RAATTY 1 cut(s) 181
XceI RCATGY 2 cut(s) 577, 926
XcmI CCANNNNNNNNNTGG 1 cut(s) 260
XmiI GTMKAC 2 cut(s) 819, 1083
XmnI GAANNNNTTC 1 cut(s) 777
XspI CTAG 2 cut(s) 653, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.