Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0012815

Physical Location & Seq

Genomic Coordinates Forward (+)

5880574 .. 5882121

Gene Structure 1548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g08810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGTATCGAAGTCTTGGCGTTCACCGCCTCATATACCGGAGCCGCATAGCTTACTACGTGAAAACTGGCCTCATCGATCAAGCACTCCAGGTGTTCGACGAAATGACCCACTCGGACTGCCGCGTTTTCAGCGTCGACTACAACCGCTTCATCGGCGTACTCGTCAAGCACTCGCGTTACGATCTCGCCGAGCACTACTACTACGAAATGGTGCCAAAGGGATTCTCCTTGAACCCGTTTACTTACTCCAGGTTCATTTCTGGCCTGTGTAAGATTAGAAATTTCACCCTCATTGAGAAGCTTCTTCGAGACATGGATAGGATTGGGGCATTGCCTGACATCTGGGCTTTCAATATATATTTGAATCTTCTGTGCCAAGAAAACAGGACGGATTTTGCTTTGGAATTGTTTCATAGGATGGTTGATAAAGGAAGAGAGCCGGATGTTGTATCGTACACTATAATTATCGATGGGTTGTGTAAAGCTGGACAATTTGATATGGCAGTTGATATTTGGAATGGTATGATTAGGAAAGGGTTTAGGCCGGATAACATTGCGTGCACGGCCCTGGTTGTTGGGTTGTGCAAGGGTGGGAAGGTTGATTTGGCTTATGACCTTGTCATTGATGAAATGAAGGGTAGAGTCAATTTTAGTAGTTTGATTTATAATGCTTTGATTAGCGGGTTTTGTCGTGCCGGTAGGATTGATAAGGCACAGGCAATCAAGTCATTTATGAAGAGAAATGGGTGCGAGCCGGATTTGGTTTCTCACAATGTGTTGTTGAATTATTGCTGTAATGCGTTCATGTTGGAGGAGGCTGAGAAGTTGATGAAGAAAATGGAGAGGGGTGGGATGGAACCGGATGTGTATAGTTATAATCAGCTTCTCATGGGCCTTTGTAAAGCTAATAGACCAGATAAGGCGTATTTGTTGATGCGAACTAGGATGGAGCCAAAAGGGTTGTGTAATGTTGTGTCATATAATACCATCATAACAGCATTTTGCAAGGCAAACCGAACTGGAAGTGCTTACAAACTGTTTGAGGAAATGCGTAACAAGGGCACTGTGCCAGATTTGGTTACATTCACTATTCTTATAAATGCCTTTTTAAGAGAAGGTAGCTCAGATATAGTCAAGAAGCTTCTTGATCAGATGACAGCAATGGGTCTGTTGCCTGACCGTATATTTTACACCACAATAGTTGATCACTTATGTAAGAGTGGGAATATTGAAATGGCTTATAGTGTTTTCAGTGAAATGCTAGAGAAGGGAATCACCCCTGATGTGATTTCATATAATGCTCTCATTAACGGGCTGCTCAAGGCTTCTAAAGTGAGCGACGCTATCCATCTTTATGAGGAAATGCAGACTAGAGGATGTAGCGCTGATGAGGTAACTTTTAAATTGATAATTGGGGGTCTCATAAGGGAGAATAAGGTTTCAGTCGCTTGTAGGGTATGGGATCAGATGATGGAAAAGGGCTTTACTCTTGATGGAGCTTTCTCTGAGACTCTGGTTAATGCCATCAATTCAAAAGATGCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016020 GO:0016070 GO:0016787 GO:0016788 GO:0031090 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

516

Amino Acids

58.48

Weight (kDa)

8.2

Isoelectric Point (pI)

23.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	47 - 91	3.7e-07	PPR repeat family
PPR_2	PF13041	112 - 161	3.4e-15	PPR repeat family
PPR_1	PF12854	143 - 175	6e-10	PPR repeat
PPR_2	PF13041	147 - 196	1.1e-14	PPR repeat family
PPR	PF01535	150 - 180	4.1e-08	PPR repeat
PPR_3	PF13812	215 - 266	1.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	220 - 266	1.8e-13	PPR repeat family
PPR	PF01535	221 - 250	1.7e-06	PPR repeat
PPR_1	PF12854	221 - 245	1.5e-07	PPR repeat
PPR_1	PF12854	248 - 281	3.1e-06	PPR repeat
PPR_2	PF13041	252 - 301	5.9e-14	PPR repeat family
PPR_1	PF12854	284 - 313	9.4e-08	PPR repeat
PPR_1	PF12854	320 - 351	4.8e-11	PPR repeat
PPR_3	PF13812	322 - 369	3.1e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	323 - 370	5.4e-18	PPR repeat family
PPR	PF01535	325 - 354	1.4e-07	PPR repeat
TPR_24	PF23276	361 - 455	8.8e-06	Fungal tetratrico peptide repeats
PPR_long	PF17177	379 - 466	2.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	380 - 437	6.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	388 - 420	1.4e-07	PPR repeat
PPR_2	PF13041	392 - 439	3.1e-15	PPR repeat family
PPR	PF01535	397 - 425	1.4e-06	PPR repeat
PPR_1	PF12854	423 - 456	3.7e-08	PPR repeat
PPR_2	PF13041	427 - 475	7.5e-15	PPR repeat family
PPR	PF01535	430 - 460	6.7e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13040 AT1G13040
fragaria_vesca	FvH4_4g25420
malus_domestica	MD13G1103100.v1.1 MD16G1103300.v1.1
prunus_persica	Prupe.1G242700_v2.0.a1
pyrus_communis	pycom13g09010 pycom16g08810
rosa_chinensis	RchiOBHm_Chr4g0432731
rosa_laevigata	RLG00000006817
rosa_multiflora	Rmu_co8522421.1_g000001
rosa_roxburghii	Rroxscaffold_5G00374190
rosa_rugosa	Rorug04G0262000
rosa_samantha	Rh4AG316500 Rh4BG324500 Rh4CG339500 Rh4DG319800
rosa_wichuraiana	Rw4G027530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	666, 876, 1097
AccB1I	GGYRCC	1 cut(s)	211
AccI	GTMKAC	1 cut(s)	135
AccII	CGCG	2 cut(s)	123, 175
AciI	CCGC	5 cut(s)	25, 43, 121, 145, 681
AclWI	GGATC	1 cut(s)	1470
AcsI	RAATTY	1 cut(s)	280
AdeI	CACNNNGTG	1 cut(s)	775
AfaI	GTAC	2 cut(s)	159, 455
AfeI	AGCGCT	1 cut(s)	1384
AgsI	TTSAA	6 cut(s)	232, 352, 364, 784, 1232, 1533
AjnI	CCWGG	3 cut(s)	87, 248, 567
AjuI	GAANNNNNNNTTGG	2 cut(s)	587, 619
AluBI	AGCT	8 cut(s)	50, 301, 485, 883, 905, 1122, 1141, 1499
AluI	AGCT	8 cut(s)	50, 301, 485, 883, 905, 1122, 1141, 1499
Alw21I	GWGCWC	2 cut(s)	195, 563
Alw26I	GTCTC	3 cut(s)	303, 1424, 1502
Alw44I	GTGCAC	1 cut(s)	559
AlwI	GGATC	1 cut(s)	1470
Aor51HI	AGCGCT	1 cut(s)	1384
AoxI	GGCC	5 cut(s)	67, 262, 542, 564, 892
ApaLI	GTGCAC	1 cut(s)	559
ApeKI	GCWGC	2 cut(s)	1315, 1541
ApoI	RAATTY	1 cut(s)	280
Asp700I	GAANNNNTTC	1 cut(s)	408
AspLEI	GCGC	1 cut(s)	1385
AspS9I	GGNCC	2 cut(s)	565, 892
AsuHPI	GGTGA	3 cut(s)	14, 277, 1267
BaeGI	GKGCMC	2 cut(s)	563, 1064
BanI	GGYRCC	1 cut(s)	211
Bbv12I	GWGCWC	2 cut(s)	195, 563
BbvI	GCAGC	2 cut(s)	1302, 1528
BccI	CCATC	9 cut(s)	412, 464, 847, 940, 995, 1356, 1465, 1487, 1532
BceAI	ACGGC	1 cut(s)	579
BciT130I	CCWGG	3 cut(s)	89, 250, 569
BclI	TGATCA	2 cut(s)	1147, 1204
BcoDI	GTCTC	3 cut(s)	303, 1424, 1502
BfaI	CTAG	3 cut(s)	942, 1262, 1371
BfoI	RGCGCY	1 cut(s)	1386
BisI	GCNGC	4 cut(s)	43, 121, 1316, 1542
BlsI	GCNGC	4 cut(s)	44, 122, 1317, 1543
Bme1390I	CCNGG	3 cut(s)	89, 250, 569
BmgT120I	GGNCC	2 cut(s)	565, 892
BmiI	GGNNCC	4 cut(s)	41, 213, 858, 951
BmrFI	CCNGG	3 cut(s)	89, 250, 569
BmsI	GCATC	2 cut(s)	924, 1528
BpmI	CTGGAG	2 cut(s)	71, 232
BpuEI	CTTGAG	1 cut(s)	1304
Bsa29I	ATCGAT	2 cut(s)	75, 468
BsaAI	YACGTR	1 cut(s)	58
BsaI	GGTCTC	1 cut(s)	1424
BsaJI	CCNNGG	1 cut(s)	567
BsaWI	WCCGGW	2 cut(s)	36, 859
Bse118I	RCCGGY	1 cut(s)	695
Bse1I	ACTGG	2 cut(s)	70, 1024
Bse3DI	GCAATG	3 cut(s)	329, 552, 1167
BseBI	CCWGG	3 cut(s)	89, 250, 569
BseCI	ATCGAT	2 cut(s)	75, 468
BseDI	CCNNGG	1 cut(s)	567
BseGI	GGATG	6 cut(s)	423, 448, 858, 868, 951, 1382
BseMI	GCAATG	3 cut(s)	329, 552, 1167
BseMII	CTCAG	3 cut(s)	810, 1137, 1497
BseNI	ACTGG	2 cut(s)	70, 1024
BseRI	GAGGAG	1 cut(s)	827
BseSI	GKGCMC	2 cut(s)	563, 1064
BseXI	GCAGC	2 cut(s)	1302, 1528
Bsh1236I	CGCG	2 cut(s)	123, 175
BshFI	GGCC	5 cut(s)	69, 264, 544, 566, 894
BshNI	GGYRCC	1 cut(s)	211
BshVI	ATCGAT	2 cut(s)	75, 468
BsiHKAI	GWGCWC	2 cut(s)	195, 563
BsiSI	CCGG	6 cut(s)	37, 440, 545, 696, 755, 860
BsmAI	GTCTC	3 cut(s)	303, 1424, 1502
BsnI	GGCC	5 cut(s)	69, 264, 544, 566, 894
Bso31I	GGTCTC	1 cut(s)	1424
Bsp1286I	GDGCHC	3 cut(s)	195, 563, 1064
Bsp143I	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
BspACI	CCGC	5 cut(s)	25, 43, 121, 145, 681
BspANI	GGCC	5 cut(s)	69, 264, 544, 566, 894
BspCNI	CTCAG	3 cut(s)	811, 1136, 1498
BspDI	ATCGAT	2 cut(s)	75, 468
BspFNI	CGCG	2 cut(s)	123, 175
BspLI	GGNNCC	4 cut(s)	41, 213, 858, 951
BspPI	GGATC	1 cut(s)	1470
BspT107I	GGYRCC	1 cut(s)	211
BspTNI	GGTCTC	1 cut(s)	1424
BsrDI	GCAATG	3 cut(s)	329, 552, 1167
BsrFI	RCCGGY	1 cut(s)	695
BsrI	ACTGG	2 cut(s)	70, 1024
BssAI	RCCGGY	1 cut(s)	695
BssECI	CCNNGG	1 cut(s)	567
BssMI	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
Bst2UI	CCWGG	3 cut(s)	89, 250, 569
Bst4CI	ACNGT	3 cut(s)	1038, 1066, 1181
Bst6I	CTCTTC	2 cut(s)	427, 731
BstBAI	YACGTR	1 cut(s)	58
BstC8I	GCNNGC	2 cut(s)	559, 752
BstDEI	CTNAG	3 cut(s)	819, 1123, 1506
BstF5I	GGATG	6 cut(s)	423, 448, 858, 868, 951, 1382
BstFNI	CGCG	2 cut(s)	123, 175
BstH2I	RGCGCY	1 cut(s)	1386
BstHHI	GCGC	1 cut(s)	1385
BstKTI	GATC	5 cut(s)	79, 184, 1150, 1207, 1465
BstMAI	GTCTC	3 cut(s)	303, 1424, 1502
BstMBI	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
BstMWI	GCNNNNNNNGC	4 cut(s)	24, 129, 153, 563
BstNI	CCWGG	3 cut(s)	89, 250, 569
BstSCI	CCNGG	3 cut(s)	87, 248, 567
BstSLI	GKGCMC	2 cut(s)	563, 1064
BstUI	CGCG	2 cut(s)	123, 175
BstV1I	GCAGC	2 cut(s)	1302, 1528
Bsu15I	ATCGAT	2 cut(s)	75, 468
BsuRI	GGCC	5 cut(s)	69, 264, 544, 566, 894
BsuTUI	ATCGAT	2 cut(s)	75, 468
BtsCI	GGATG	6 cut(s)	423, 448, 858, 868, 951, 1382
BtsIMutI	CAGTG	2 cut(s)	1062, 1258
Cac8I	GCNNGC	2 cut(s)	559, 752
CfoI	GCGC	1 cut(s)	1385
Cfr10I	RCCGGY	1 cut(s)	695
Cfr13I	GGNCC	2 cut(s)	565, 892
ClaI	ATCGAT	2 cut(s)	75, 468
CseI	GACGC	2 cut(s)	121, 1349
Csp6I	GTAC	2 cut(s)	158, 454
CspCI	CAANNNNNGTGG	2 cut(s)	1183, 1218
CviAII	CATG	3 cut(s)	313, 805, 889
CviQI	GTAC	2 cut(s)	158, 454
DdeI	CTNAG	3 cut(s)	819, 1123, 1506
DpnI	GATC	5 cut(s)	78, 183, 1149, 1206, 1464
DpnII	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
DraI	TTTAAA	1 cut(s)	1402
DraIII	CACNNNGTG	1 cut(s)	775
Eam1104I	CTCTTC	2 cut(s)	427, 731
EarI	CTCTTC	2 cut(s)	427, 731
Eco31I	GGTCTC	1 cut(s)	1424
Eco47III	AGCGCT	1 cut(s)	1384
EcoRII	CCWGG	3 cut(s)	87, 248, 567
FaeI	CATG	3 cut(s)	316, 808, 892
FatI	CATG	3 cut(s)	312, 804, 888
FauI	CCCGC	1 cut(s)	674
FbaI	TGATCA	2 cut(s)	1147, 1204
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	4 cut(s)	43, 121, 1316, 1542
FokI	GGATG	6 cut(s)	430, 455, 865, 875, 958, 1389
Fsp4HI	GCNGC	4 cut(s)	43, 121, 1316, 1542
FspBI	CTAG	3 cut(s)	942, 1262, 1371
GlaI	GCGC	1 cut(s)	1384
GluI	GCNGC	4 cut(s)	43, 121, 1316, 1542
GsuI	CTGGAG	2 cut(s)	71, 232
HaeII	RGCGCY	1 cut(s)	1386
HaeIII	GGCC	5 cut(s)	69, 264, 544, 566, 894
HapII	CCGG	6 cut(s)	37, 440, 545, 696, 755, 860
HgaI	GACGC	2 cut(s)	121, 1349
HhaI	GCGC	1 cut(s)	1385
Hin1II	CATG	3 cut(s)	316, 808, 892
Hin6I	GCGC	1 cut(s)	1383
HinP1I	GCGC	1 cut(s)	1383
HincII	GTYRAC	1 cut(s)	136
HindII	GTYRAC	1 cut(s)	136
HindIII	AAGCTT	2 cut(s)	299, 1139
HinfI	GANTC	5 cut(s)	222, 364, 642, 1272, 1510
HpaII	CCGG	6 cut(s)	37, 440, 545, 696, 755, 860
HphI	GGTGA	3 cut(s)	14, 277, 1267
Hpy166II	GTNNAC	5 cut(s)	22, 136, 240, 456, 561
Hpy188I	TCNGA	5 cut(s)	115, 1126, 1152, 1467, 1507
Hpy188III	TCNNGA	4 cut(s)	308, 1135, 1145, 1490
Hpy8I	GTNNAC	5 cut(s)	22, 136, 240, 456, 561
Hpy99I	CGWCG	3 cut(s)	101, 137, 1343
HpyAV	CCTTC	4 cut(s)	589, 628, 1109, 1261
HpyCH4III	ACNGT	3 cut(s)	1038, 1066, 1181
HpyCH4IV	ACGT	1 cut(s)	57
HpyCH4V	TGCA	5 cut(s)	561, 585, 1005, 1366, 1544
HpyF10VI	GCNNNNNNNGC	4 cut(s)	24, 129, 153, 563
HpyF3I	CTNAG	3 cut(s)	819, 1123, 1506
HpySE526I	ACGT	1 cut(s)	57
Hsp92II	CATG	3 cut(s)	316, 808, 892
HspAI	GCGC	1 cut(s)	1383
Ksp22I	TGATCA	2 cut(s)	1147, 1204
Kzo9I	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
LmnI	GCTCC	3 cut(s)	39, 949, 1496
Lsp1109I	GCAGC	2 cut(s)	1302, 1528
LweI	GCATC	2 cut(s)	924, 1528
MaeI	CTAG	3 cut(s)	942, 1262, 1371
MaeII	ACGT	1 cut(s)	57
MaeIII	GTNAC	4 cut(s)	176, 1052, 1078, 1393
MalI	GATC	5 cut(s)	78, 183, 1149, 1206, 1464
MboI	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
MboII	GAAGA	5 cut(s)	296, 359, 444, 748, 844
MhlI	GDGCHC	3 cut(s)	195, 563, 1064
MluCI	AATT	9 cut(s)	280, 404, 462, 491, 646, 784, 1403, 1410, 1528
MlyI	GAGTC	2 cut(s)	651, 1504
MmeI	TCCRAC	1 cut(s)	789
MroXI	GAANNNNTTC	1 cut(s)	408
MseI	TTAA	4 cut(s)	1109, 1308, 1401, 1518
MslI	CAYNNNNRTG	1 cut(s)	1353
MspI	CCGG	6 cut(s)	37, 440, 545, 696, 755, 860
MspR9I	CCNGG	3 cut(s)	89, 250, 569
MvaI	CCWGG	3 cut(s)	89, 250, 569
MvnI	CGCG	2 cut(s)	123, 175
MwoI	GCNNNNNNNGC	4 cut(s)	24, 129, 153, 563
NdeII	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
NlaIII	CATG	3 cut(s)	316, 808, 892
NlaIV	GGNNCC	4 cut(s)	41, 213, 858, 951
NmeAIII	GCCGAG	1 cut(s)	214
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 186
PdmI	GAANNNNTTC	1 cut(s)	408
PfeI	GAWTC	3 cut(s)	222, 364, 1272
PflFI	GACNNNGTC	1 cut(s)	617
PkrI	GCNGC	4 cut(s)	44, 122, 1317, 1543
PleI	GAGTC	2 cut(s)	650, 1504
PpsI	GAGTC	2 cut(s)	650, 1504
Ppu21I	YACGTR	1 cut(s)	58
PsiI	TTATAA	3 cut(s)	666, 876, 1097
Psp6I	CCWGG	3 cut(s)	87, 248, 567
PspGI	CCWGG	3 cut(s)	87, 248, 567
PspN4I	GGNNCC	4 cut(s)	41, 213, 858, 951
PspPI	GGNCC	2 cut(s)	565, 892
PsyI	GACNNNGTC	1 cut(s)	617
RsaI	GTAC	2 cut(s)	159, 455
RsaNI	GTAC	2 cut(s)	158, 454
RseI	CAYNNNNRTG	1 cut(s)	1353
SalI	GTCGAC	1 cut(s)	134
SaqAI	TTAA	4 cut(s)	1109, 1308, 1401, 1518
SatI	GCNGC	4 cut(s)	43, 121, 1316, 1542
Sau3AI	GATC	5 cut(s)	76, 181, 1147, 1204, 1462
Sau96I	GGNCC	2 cut(s)	565, 892
SchI	GAGTC	2 cut(s)	651, 1504
ScrFI	CCNGG	3 cut(s)	89, 250, 569
SduI	GDGCHC	3 cut(s)	195, 563, 1064
SfaNI	GCATC	2 cut(s)	924, 1528
SmiMI	CAYNNNNRTG	1 cut(s)	1353
SmlI	CTYRAG	1 cut(s)	1319
SmoI	CTYRAG	1 cut(s)	1319
Sse9I	AATT	9 cut(s)	280, 404, 462, 491, 646, 784, 1403, 1410, 1528
SsiI	CCGC	5 cut(s)	25, 43, 121, 145, 681
SspI	AATATT	1 cut(s)	1228
SspMI	CTAG	3 cut(s)	942, 1262, 1371
StyD4I	CCNGG	3 cut(s)	87, 248, 567
TaaI	ACNGT	3 cut(s)	1038, 1066, 1181
TaiI	ACGT	1 cut(s)	60
TaqI	TCGA	6 cut(s)	7, 75, 96, 135, 307, 468
TasI	AATT	9 cut(s)	280, 404, 462, 491, 646, 784, 1403, 1410, 1528
TauI	GCSGC	2 cut(s)	45, 123
TfiI	GAWTC	3 cut(s)	222, 364, 1272
Tru1I	TTAA	4 cut(s)	1109, 1308, 1401, 1518
Tru9I	TTAA	4 cut(s)	1109, 1308, 1401, 1518
TscAI	CASTG	2 cut(s)	1069, 1258
TseI	GCWGC	2 cut(s)	1315, 1541
TspDTI	ATGAA	9 cut(s)	139, 244, 401, 642, 647, 749, 793, 845, 1281
TspGWI	ACGGA	1 cut(s)	404
TspRI	CASTG	2 cut(s)	1069, 1258
Tth111I	GACNNNGTC	1 cut(s)	617
VneI	GTGCAC	1 cut(s)	559
XapI	RAATTY	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	135
XmnI	GAANNNNTTC	1 cut(s)	408
XspI	CTAG	3 cut(s)	942, 1262, 1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.