pycom16g12970

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0014038
Physical Location & Seq
Reverse (-)
9205297 .. 9210744
5448 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2433 bp
ATGGCTGCCAAATCAAATCGAACACCAATATTACATGCCTTTGTTTTTGCACTGAGCCTGCTCGTATTTCAATCCGAGTCCGCGCCTCAGGCTTTCCGGCGAGATCCCGGTCACCCTCAGTGGCACCACGGCGCCTTCCACGACGTTCGAGATAGCGTCCGATCCGATGTCCGCCGCATGCTCCACTCTCGCGCCGAGGTGCCGTTTCAGGTTCCTCTCGAAGTGAATGTGGTTCTTATTGGCTTCAATGGCGATGGAGGCTATAGGTACTCCATCGATTCGCACAAATTGGAAGATTTTCTGAAAATCAGCTTCCCATCGCATAAGCCTTCCTGCCTTGAGACAGGAGAACCTCTCGATATCGAGCATCAAATTGTTTATAATGCCTTTCCGGCTGGGCAGCCAGAACTAATAGCTCTTGAGAAGGCACTGAAAGAAGCTATGGTTGCTGCAGGAAACGCAAGAGAGACTGATTTTGGAAGGCAAGTACCTCTGTATGAAGTGGATGCAACTGTAGTGGAGCCAATGTTTCAGAAGTTATATTCCTACATATTTGACATAGAGAATGCTGCTAATTCTGCTGCGAATATGGATCGGCAAATTCCGAGTGCAATATTTATTGTCAATTTTGATAAGGTAAGGATGGATCCTAGGAATAAGGACATTGATCTTGACAGCTTAATGTATGGAAAACTTAGCCAGCTAACTGAGGAAGATATGAAAAACCAAGAGGGAGACTACATTTATCGCTATCGATACAATGGAGGAGGTGCCTCTCAAGTTTGGCTTGGCTCTGGCAGATTTGTTGTGATCGATCTCTCAGCAGGCCCATGCACATATGGAAAGATTGAAACTGAAGAGGGAACCGTCAGTTCTAGGTCACTGCCACGACTTCGCAATGTGATGGTTCCAAGAGGTTTGGGTGCAGCTAGTGATCATCCTACACATGATGTATTTGTTGGACAACTTGCGTCTTTAGTGTCCACCACAGTTGAGCATGTTATAGCTCCAGATGTTAGATTTGAAACTGTTGACTTGACAACAAGGCTGCTATTACCAATAATTGTCCTGCAAAATCACAATTGGTACAATATAATAGACAAAGGCCACAACTACAGCATAAATATTGAAGCAATTGAGGCAGAGGTGAAGAAAATGGTTCATGTTGGCCAAGAAGTTGTGATCGTTGGGGGTTCACATTCATTGCATCGCCATGAGAAGTTGTCTATTGCTGTTTCAAAAGCTATGCGAAGCCATTCGCTGCAAGAAACTAAGAACGATGGACGCTTCCATGTTCATACCAAGACTTATCTGGATGGTGCTATTCTTAAAGAAGAGATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAAGTGGCTGACCCATCTCTTTCAAGTAAATTTTTCCTCCGCCAGCATTGGGCAGATCAAACTGAAAATTCAAGTGATTCTATACTAAAGCATAAACCTCTTTGGACTACTTATGACTCAAAACGTGGCAAGAAAAAGAAGAAAGTAGTAAGGAAACAAGGAGATATCTACCGGACTTATGGAACAAGAGTGATTCCTGTCTTTGTGCTATCATTGGCTGATGTGGATCCACAACTTATGATGGAAGACGAAAGTCTTGTATGGACAAGCAAAGATGTCGTGATTGTACTTGAGCACCAAAATGAGAAGATACCTCTTAGTTATGTTTCAGAAACACAGAGAAGACACAACTTTCCTTCGCAGGCACAACGCCATATATTGGCAGGGCTTGCCTCCGCTGTTGGTGGGTTGAGTGCACCATATGAGAAGGCTTCTCATATACATGAAAGGCCAGTTGTAAATTGGCTTTGGGCAGCTGGTTGTCATCCGTTTGGACCATTCTCTAATACTTCTCAAGTCAGTCAAATTCTTCAGGATGTTGCGTTGAGGAACACAATATATGCACGTGTAGATTCTGCACTCCGTAAAATTCGCGAAACATCAGAGACTGTACAAACTTTTGCCGCAGAGTATCTGAAAACTCCCCTTGGTGAACCAGTGAAGGGCAAGAAGAACAAATCAACCACTGAACTGTGGGTGGAGAAGTTTTACAAAAAAACAACTAACTTGCCCGAACCCTTCCCGCATGAATTAGTTGAGAGATTGGAGAACTTCTTGGATAACCTCGAGGAACAGCTTGTAGACTTGTCTTCGTCACTATATGGTCATCGCTTACAAGAAGCACATCTAAACAGTTCAGAGATTCTCCAGAGTTCAATATTTACTCAGCAGTATGTAGACCATGTTCTGGCGACTGAGAGGGAAAAGATGAAGTGCTGCGACATTGAGTACAAGTATCCTGTGCAGTCATCTCAAACCTATATCTACGGGGGGATTCTCATTGCCGGATTCATTGTATATTTCGTGGTCATTTTCTTTTCAAATCCTGTGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

811

Amino Acids

91.56

Weight (kDa)

6.33

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 71 - 337 1.5e-58 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 381
AbsI CCTCGAGG 1 cut(s) 2162
AccB1I GGYRCC 4 cut(s) 123, 131, 199, 770
AccB7I CCANNNNNTGG 2 cut(s) 1756, 2284
AccI GTMKAC 2 cut(s) 2178, 2274
AccII CGCG 3 cut(s) 83, 192, 1971
AciI CCGC 7 cut(s) 81, 172, 175, 1417, 1773, 2001, 2120
AclI AACGTT 1 cut(s) 1345
AclWI GGATC 7 cut(s) 98, 156, 600, 641, 654, 1598, 1611
AcoI YGGCCR 1 cut(s) 1168
AcsI RAATTY 5 cut(s) 600, 1406, 1444, 1902, 1965
AcuI CTGAAG 2 cut(s) 876, 1892
AcvI CACGTG 1 cut(s) 1943
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 6 cut(s) 269, 489, 1088, 1665, 1989, 2327
AfiI CCNNNNNNNGG 4 cut(s) 1426, 1756, 2039, 2284
AflIII ACRYGT 1 cut(s) 1942
Alw21I GWGCWC 2 cut(s) 1674, 1795
Alw26I GTCTC 4 cut(s) 335, 461, 729, 1976
Alw44I GTGCAC 1 cut(s) 1791
AlwI GGATC 7 cut(s) 98, 156, 600, 641, 654, 1598, 1611
AlwNI CAGNNNCTG 1 cut(s) 1985
Ama87I CYCGRG 1 cut(s) 2162
AoxI GGCC 4 cut(s) 826, 1105, 1168, 1826
ApaLI GTGCAC 1 cut(s) 1791
ApoI RAATTY 5 cut(s) 600, 1406, 1444, 1902, 1965
Asp700I GAANNNNTTC 2 cut(s) 297, 1255
AspA2I CCTAGG 1 cut(s) 650
AspLEI GCGC 4 cut(s) 85, 134, 194, 2430
AspS9I GGNCC 2 cut(s) 827, 1871
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 3 cut(s) 104, 1159, 2039
AvaI CYCGRG 1 cut(s) 2162
AvaII GGWCC 1 cut(s) 1871
AvrII CCTAGG 1 cut(s) 650
AxyI CCTNAGG 1 cut(s) 87
BaeGI GKGCMC 1 cut(s) 1795
BalI TGGCCA 1 cut(s) 1170
BamHI GGATCC 2 cut(s) 646, 1603
BanI GGYRCC 4 cut(s) 123, 131, 199, 770
BbrPI CACGTG 1 cut(s) 1943
BbsI GAAGAC 3 cut(s) 1629, 1726, 2178
Bbv12I GWGCWC 2 cut(s) 1674, 1795
BceAI ACGGC 2 cut(s) 145, 187
BcgI CGANNNNNNTGC 2 cut(s) 1636, 1670
BciVI GTATCC 1 cut(s) 2343
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 4 cut(s) 335, 461, 729, 1976
BfaI CTAG 3 cut(s) 651, 876, 930
BfmI CTRYAG 4 cut(s) 262, 450, 513, 1114
BfoI RGCGCY 1 cut(s) 135
BfuI GTATCC 1 cut(s) 2343
BglI GCCNNNNNGGC 1 cut(s) 392
BlnI CCTAGG 1 cut(s) 650
Bme1390I CCNGG 1 cut(s) 108
Bme18I GGWCC 1 cut(s) 1871
BmeT110I CYCGRG 1 cut(s) 2162
BmgT120I GGNCC 2 cut(s) 827, 1871
BmrFI CCNGG 1 cut(s) 108
BmsI GCATC 3 cut(s) 376, 496, 1216
BoxI GACNNNNGTC 1 cut(s) 1629
BpiI GAAGAC 3 cut(s) 1629, 1726, 2178
BplI GAGNNNNNCTC 2 cut(s) 339, 371
BpmI CTGGAG 2 cut(s) 993, 2228
BpuEI CTTGAG 5 cut(s) 359, 440, 762, 1688, 1875
BpuMI CCSGG 1 cut(s) 108
Bsa29I ATCGAT 3 cut(s) 276, 754, 813
BsaAI YACGTR 1 cut(s) 1943
BsaBI GATNNNNATC 1 cut(s) 1602
BsaHI GRCGYC 1 cut(s) 132
BsaJI CCNNGG 4 cut(s) 127, 195, 650, 2023
BsaWI WCCGGW 1 cut(s) 1548
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 4 cut(s) 1426, 1756, 2039, 2284
Bse1I ACTGG 2 cut(s) 1829, 2033
Bse21I CCTNAGG 1 cut(s) 87
Bse3DI GCAATG 3 cut(s) 904, 1202, 2376
Bse8I GATNNNNATC 1 cut(s) 1602
BseCI ATCGAT 3 cut(s) 276, 754, 813
BseDI CCNNGG 4 cut(s) 127, 195, 650, 2023
BseGI GGATG 6 cut(s) 511, 648, 937, 1321, 1861, 1918
BseJI GATNNNNATC 1 cut(s) 1602
BseLI CCNNNNNNNGG 4 cut(s) 1426, 1756, 2039, 2284
BseMI GCAATG 3 cut(s) 904, 1202, 2376
BseMII CTCAG 7 cut(s) 44, 101, 131, 699, 834, 2276, 2283
BseNI ACTGG 2 cut(s) 1829, 2033
BseRI GAGGAG 1 cut(s) 780
BseSI GKGCMC 1 cut(s) 1795
BseYI CCCAGC 1 cut(s) 395
BsgI GTGCAG 3 cut(s) 945, 1938, 2360
Bsh1236I CGCG 3 cut(s) 83, 192, 1971
BshFI GGCC 4 cut(s) 828, 1107, 1170, 1828
BshNI GGYRCC 4 cut(s) 123, 131, 199, 770
BshVI ATCGAT 3 cut(s) 276, 754, 813
BsiHKAI GWGCWC 2 cut(s) 1674, 1795
BsiHKCI CYCGRG 1 cut(s) 2162
BsiSI CCGG 5 cut(s) 97, 108, 392, 1549, 2382
BslI CCNNNNNNNGG 4 cut(s) 1426, 1756, 2039, 2284
BsmAI GTCTC 4 cut(s) 335, 461, 729, 1976
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 4 cut(s) 828, 1107, 1170, 1828
BsoBI CYCGRG 1 cut(s) 2162
Bsp1286I GDGCHC 2 cut(s) 1674, 1795
Bsp1407I TGTACA 1 cut(s) 1987
Bsp68I TCGCGA 1 cut(s) 1971
BspACI CCGC 7 cut(s) 81, 172, 175, 1417, 1773, 2001, 2120
BspANI GGCC 4 cut(s) 828, 1107, 1170, 1828
BspCNI CTCAG 7 cut(s) 45, 100, 130, 700, 833, 2275, 2284
BspDI ATCGAT 3 cut(s) 276, 754, 813
BspFNI CGCG 3 cut(s) 83, 192, 1971
BspMAI CTGCAG 1 cut(s) 454
BspPI GGATC 7 cut(s) 98, 156, 600, 641, 654, 1598, 1611
BspT107I GGYRCC 4 cut(s) 123, 131, 199, 770
BsrDI GCAATG 3 cut(s) 904, 1202, 2376
BsrGI TGTACA 1 cut(s) 1987
BsrI ACTGG 2 cut(s) 1829, 2033
BssECI CCNNGG 4 cut(s) 127, 195, 650, 2023
BssNI GRCGYC 1 cut(s) 132
BssT1I CCWWGG 2 cut(s) 650, 2023
Bst4CI ACNGT 7 cut(s) 514, 868, 991, 1030, 1987, 2070, 2231
Bst6I CTCTTC 2 cut(s) 852, 1329
BstACI GRCGYC 1 cut(s) 132
BstAPI GCANNNNNTGC 1 cut(s) 1766
BstAUI TGTACA 1 cut(s) 1987
BstBAI YACGTR 1 cut(s) 1943
BstC8I GCNNGC 8 cut(s) 59, 179, 701, 826, 1362, 1421, 1740, 1767
BstDSI CCRYGG 1 cut(s) 127
BstEII GGTNACC 1 cut(s) 110
BstF5I GGATG 6 cut(s) 511, 648, 937, 1321, 1861, 1918
BstFNI CGCG 3 cut(s) 83, 192, 1971
BstH2I RGCGCY 1 cut(s) 135
BstHHI GCGC 4 cut(s) 85, 134, 194, 2430
BstMAI GTCTC 4 cut(s) 335, 461, 729, 1976
BstMWI GCNNNNNNNGC 9 cut(s) 89, 249, 258, 392, 446, 458, 578, 1139, 1766
BstNSI RCATGY 3 cut(s) 38, 181, 1001
BstPAI GACNNNNGTC 1 cut(s) 1629
BstPI GGTNACC 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 4 cut(s) 262, 450, 513, 1114
BstSLI GKGCMC 1 cut(s) 1795
BstUI CGCG 3 cut(s) 83, 192, 1971
BstV2I GAAGAC 3 cut(s) 1629, 1726, 2178
BstX2I RGATCY 3 cut(s) 103, 646, 1603
BstYI RGATCY 3 cut(s) 103, 646, 1603
Bsu15I ATCGAT 3 cut(s) 276, 754, 813
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 1 cut(s) 2343
BsuRI GGCC 4 cut(s) 828, 1107, 1170, 1828
BsuTUI ATCGAT 3 cut(s) 276, 754, 813
BtgI CCRYGG 1 cut(s) 127
BtgZI GCGATG 4 cut(s) 267, 303, 1193, 2189
BtsCI GGATG 6 cut(s) 511, 648, 937, 1321, 1861, 1918
BtsI GCAGTG 1 cut(s) 881
BtsIMutI CAGTG 6 cut(s) 50, 125, 428, 881, 2040, 2061
BtuMI TCGCGA 1 cut(s) 1971
Cac8I GCNNGC 8 cut(s) 59, 179, 701, 826, 1362, 1421, 1740, 1767
CaiI CAGNNNCTG 1 cut(s) 1985
CfoI GCGC 4 cut(s) 85, 134, 194, 2430
Cfr13I GGNCC 2 cut(s) 827, 1871
ClaI ATCGAT 3 cut(s) 276, 754, 813
CseI GACGC 3 cut(s) 145, 960, 1293
Csp6I GTAC 6 cut(s) 268, 488, 1087, 1664, 1988, 2326
CspCI CAANNNNNGTGG 4 cut(s) 498, 533, 973, 1008
CviQI GTAC 6 cut(s) 268, 488, 1087, 1664, 1988, 2326
DinI GGCGCC 1 cut(s) 133
EaeI YGGCCR 1 cut(s) 1168
Eam1104I CTCTTC 2 cut(s) 852, 1329
EarI CTCTTC 2 cut(s) 852, 1329
EciI GGCGGA 2 cut(s) 161, 1406
Eco130I CCWWGG 2 cut(s) 650, 2023
Eco32I GATATC 2 cut(s) 361, 1543
Eco47I GGWCC 1 cut(s) 1871
Eco57I CTGAAG 2 cut(s) 876, 1892
Eco72I CACGTG 1 cut(s) 1943
Eco81I CCTNAGG 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 2162
Eco91I GGTNACC 1 cut(s) 110
EcoO65I GGTNACC 1 cut(s) 110
EcoRV GATATC 2 cut(s) 361, 1543
EcoT14I CCWWGG 2 cut(s) 650, 2023
EgeI GGCGCC 1 cut(s) 133
EheI GGCGCC 1 cut(s) 133
ErhI CCWWGG 2 cut(s) 650, 2023
FalI AAGNNNNNCTT 2 cut(s) 771, 803
FauI CCCGC 1 cut(s) 2127
FauNDI CATATG 2 cut(s) 838, 1798
FbaI TGATCA 1 cut(s) 934
FblI GTMKAC 2 cut(s) 2178, 2274
FokI GGATG 6 cut(s) 518, 655, 924, 1328, 1848, 1925
FspBI CTAG 3 cut(s) 651, 876, 930
GlaI GCGC 4 cut(s) 84, 133, 193, 2429
GsaI CCCAGC 1 cut(s) 399
GsuI CTGGAG 2 cut(s) 993, 2228
HaeII RGCGCY 1 cut(s) 135
HaeIII GGCC 4 cut(s) 828, 1107, 1170, 1828
HapII CCGG 5 cut(s) 97, 108, 392, 1549, 2382
HgaI GACGC 3 cut(s) 145, 960, 1293
HhaI GCGC 4 cut(s) 85, 134, 194, 2430
Hin1I GRCGYC 1 cut(s) 132
Hin6I GCGC 4 cut(s) 83, 132, 192, 2428
HinP1I GCGC 4 cut(s) 83, 132, 192, 2428
HincII GTYRAC 1 cut(s) 1033
HindII GTYRAC 1 cut(s) 1033
HinfI GANTC 9 cut(s) 77, 278, 1454, 1493, 1570, 1949, 2239, 2371, 2385
HpaII CCGG 5 cut(s) 97, 108, 392, 1549, 2382
HphI GGTGA 3 cut(s) 104, 1159, 2039
Hpy166II GTNNAC 7 cut(s) 984, 1033, 1196, 1793, 2030, 2179, 2275
Hpy8I GTNNAC 7 cut(s) 984, 1033, 1196, 1793, 2030, 2179, 2275
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 8 cut(s) 145, 339, 418, 474, 1743, 1798, 2032, 2125
HpyCH4III ACNGT 7 cut(s) 514, 868, 991, 1030, 1987, 2070, 2231
HpyCH4IV ACGT 4 cut(s) 144, 1345, 1501, 1942
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 249, 258, 392, 446, 458, 578, 1139, 1766
HpySE526I ACGT 4 cut(s) 144, 1345, 1501, 1942
Hsp92I GRCGYC 1 cut(s) 132
HspAI GCGC 4 cut(s) 83, 132, 192, 2428
KasI GGCGCC 1 cut(s) 131
Ksp22I TGATCA 1 cut(s) 934
LmnI GCTCC 3 cut(s) 186, 520, 1012
LweI GCATC 3 cut(s) 376, 496, 1216
MaeI CTAG 3 cut(s) 651, 876, 930
MaeII ACGT 4 cut(s) 144, 1345, 1501, 1942
MaeIII GTNAC 3 cut(s) 110, 879, 2190
MfeI CAATTG 2 cut(s) 1081, 1134
MflI RGATCY 3 cut(s) 103, 646, 1603
MhlI GDGCHC 2 cut(s) 1674, 1795
MlsI TGGCCA 1 cut(s) 1170
MluNI TGGCCA 1 cut(s) 1170
Mly113I GGCGCC 1 cut(s) 132
MlyI GAGTC 2 cut(s) 86, 1487
MmeI TCCRAC 1 cut(s) 940
Mox20I TGGCCA 1 cut(s) 1170
MroXI GAANNNNTTC 2 cut(s) 297, 1255
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 2 cut(s) 680, 1329
MslI CAYNNNNRTG 3 cut(s) 1212, 1677, 1818
Msp20I TGGCCA 1 cut(s) 1170
MspA1I CMGCKG 2 cut(s) 1775, 1853
MspI CCGG 5 cut(s) 97, 108, 392, 1549, 2382
MspR9I CCNGG 1 cut(s) 108
MunI CAATTG 2 cut(s) 1081, 1134
Mva1269I GAATGC 1 cut(s) 571
MvnI CGCG 3 cut(s) 83, 192, 1971
MwoI GCNNNNNNNGC 9 cut(s) 89, 249, 258, 392, 446, 458, 578, 1139, 1766
NarI GGCGCC 1 cut(s) 132
NciI CCSGG 1 cut(s) 108
NdeI CATATG 2 cut(s) 838, 1798
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 3 cut(s) 110, 879, 2190
NruI TCGCGA 1 cut(s) 1971
NspI RCATGY 3 cut(s) 38, 181, 1001
PaeI GCATGC 1 cut(s) 181
PaeR7I CTCGAG 1 cut(s) 2162
PctI GAATGC 1 cut(s) 571
PdmI GAANNNNTTC 2 cut(s) 297, 1255
PfeI GAWTC 7 cut(s) 278, 1454, 1570, 1949, 2239, 2371, 2385
PflMI CCANNNNNTGG 2 cut(s) 1756, 2284
PleI GAGTC 2 cut(s) 85, 1487
PluTI GGCGCC 1 cut(s) 135
PmaCI CACGTG 1 cut(s) 1943
PmlI CACGTG 1 cut(s) 1943
PpsI GAGTC 2 cut(s) 85, 1487
Ppu21I YACGTR 1 cut(s) 1943
PshAI GACNNNNGTC 1 cut(s) 1629
PsiI TTATAA 1 cut(s) 381
Psp1406I AACGTT 1 cut(s) 1345
PspCI CACGTG 1 cut(s) 1943
PspEI GGTNACC 1 cut(s) 110
PspFI CCCAGC 1 cut(s) 395
PspPI GGNCC 2 cut(s) 827, 1871
PspXI VCTCGAGB 1 cut(s) 2162
PsrI GAACNNNNNNTAC 2 cut(s) 2265, 2297
PstI CTGCAG 1 cut(s) 454
PstNI CAGNNNCTG 1 cut(s) 1985
PsuI RGATCY 3 cut(s) 103, 646, 1603
PvuII CAGCTG 1 cut(s) 1853
RruI TCGCGA 1 cut(s) 1971
RsaI GTAC 6 cut(s) 269, 489, 1088, 1665, 1989, 2327
RsaNI GTAC 6 cut(s) 268, 488, 1087, 1664, 1988, 2326
RseI CAYNNNNRTG 3 cut(s) 1212, 1677, 1818
SaqAI TTAA 2 cut(s) 680, 1329
Sau96I GGNCC 2 cut(s) 827, 1871
SchI GAGTC 2 cut(s) 86, 1487
ScrFI CCNGG 1 cut(s) 108
SduI GDGCHC 2 cut(s) 1674, 1795
SfaNI GCATC 3 cut(s) 376, 496, 1216
SfcI CTRYAG 4 cut(s) 262, 450, 513, 1114
SfoI GGCGCC 1 cut(s) 133
Sfr274I CTCGAG 1 cut(s) 2162
SinI GGWCC 1 cut(s) 1871
SlaI CTCGAG 1 cut(s) 2162
SmiMI CAYNNNNRTG 3 cut(s) 1212, 1677, 1818
SmlI CTYRAG 6 cut(s) 338, 419, 777, 1667, 1890, 2162
SmoI CTYRAG 6 cut(s) 338, 419, 777, 1667, 1890, 2162
SphI GCATGC 1 cut(s) 181
SsiI CCGC 7 cut(s) 81, 172, 175, 1417, 1773, 2001, 2120
SspDI GGCGCC 1 cut(s) 131
SspI AATATT 4 cut(s) 30, 615, 1126, 2256
SspMI CTAG 3 cut(s) 651, 876, 930
StyD4I CCNGG 1 cut(s) 106
StyI CCWWGG 2 cut(s) 650, 2023
TaaI ACNGT 7 cut(s) 514, 868, 991, 1030, 1987, 2070, 2231
TaiI ACGT 4 cut(s) 147, 1348, 1504, 1945
TaqI TCGA 9 cut(s) 19, 148, 219, 276, 357, 363, 754, 813, 2163
TatI WGTACW 3 cut(s) 1663, 1987, 2325
TauI GCSGC 2 cut(s) 177, 2003
TfiI GAWTC 7 cut(s) 278, 1454, 1570, 1949, 2239, 2371, 2385
Tru1I TTAA 2 cut(s) 680, 1329
Tru9I TTAA 2 cut(s) 680, 1329
TscAI CASTG 6 cut(s) 57, 125, 435, 888, 2040, 2068
TseFI GTSAC 3 cut(s) 110, 879, 2190
Tsp45I GTSAC 3 cut(s) 110, 879, 2190
TspDTI ATGAA 9 cut(s) 513, 734, 1151, 1191, 1286, 1836, 2139, 2321, 2377
TspGWI ACGGA 2 cut(s) 1854, 1949
TspRI CASTG 6 cut(s) 57, 125, 435, 888, 2040, 2068
Van91I CCANNNNNTGG 2 cut(s) 1756, 2284
VneI GTGCAC 1 cut(s) 1791
VpaK11BI GGWCC 1 cut(s) 1871
XapI RAATTY 5 cut(s) 600, 1406, 1444, 1902, 1965
XceI RCATGY 3 cut(s) 38, 181, 1001
XcmI CCANNNNNNNNNTGG 2 cut(s) 1309, 1836
XhoI CTCGAG 1 cut(s) 2162
XmaJI CCTAGG 1 cut(s) 650
XmiI GTMKAC 2 cut(s) 2178, 2274
XmnI GAANNNNTTC 2 cut(s) 297, 1255
XspI CTAG 3 cut(s) 651, 876, 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.