pectinesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05310 |
| fragaria_vesca | FvH4_6g39490 |
| malus_domestica | MD09G1139900.v1.1 MD17G1129300.v1.1 |
| prunus_persica | Prupe.3G185700_v2.0.a1 Prupe.3G185700_v2.0.a1 |
| pyrus_communis | pycom09g06080 pycom17g12170 |
| rosa_chinensis | RchiOBHm_Chr2g0153521 |
| rosa_laevigata | RLG00000020705 |
| rosa_multiflora | Rmu_sc0003976.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00094960 |
| rosa_rugosa | Rorug02G0438800 |
| rosa_samantha | Rh2AG502700 Rh2BG513500 Rh2CG488500 Rh2DG525200 |
| rosa_wichuraiana | Rw2G041280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 287 |
| AcuI | CTGAAG | 1 cut(s) | 291 |
| AfaI | GTAC | 1 cut(s) | 378 |
| AflIII | ACRYGT | 1 cut(s) | 417 |
| AgsI | TTSAA | 2 cut(s) | 68, 289 |
| AluBI | AGCT | 6 cut(s) | 105, 131, 266, 360, 385, 401 |
| AluI | AGCT | 6 cut(s) | 105, 131, 266, 360, 385, 401 |
| Alw26I | GTCTC | 1 cut(s) | 297 |
| AlwI | GGATC | 1 cut(s) | 287 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 385 |
| Ama87I | CYCGRG | 1 cut(s) | 225 |
| AoxI | GGCC | 1 cut(s) | 215 |
| AseI | ATTAAT | 1 cut(s) | 459 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 284 |
| AspLEI | GCGC | 3 cut(s) | 40, 121, 370 |
| AvaI | CYCGRG | 1 cut(s) | 225 |
| BccI | CCATC | 1 cut(s) | 425 |
| BceAI | ACGGC | 1 cut(s) | 139 |
| BcoDI | GTCTC | 1 cut(s) | 297 |
| BmeT110I | CYCGRG | 1 cut(s) | 225 |
| BsaAI | YACGTR | 1 cut(s) | 376 |
| BsaI | GGTCTC | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 1 cut(s) | 135 |
| Bse1I | ACTGG | 2 cut(s) | 154, 190 |
| BseDI | CCNNGG | 1 cut(s) | 135 |
| BseGI | GGATG | 1 cut(s) | 145 |
| BseMII | CTCAG | 2 cut(s) | 75, 351 |
| BseNI | ACTGG | 2 cut(s) | 154, 190 |
| BseYI | CCCAGC | 1 cut(s) | 199 |
| BsgI | GTGCAG | 1 cut(s) | 363 |
| BshFI | GGCC | 1 cut(s) | 217 |
| BsiHKCI | CYCGRG | 1 cut(s) | 225 |
| BslFI | GGGAC | 1 cut(s) | 196 |
| BsmAI | GTCTC | 1 cut(s) | 297 |
| BsmFI | GGGAC | 1 cut(s) | 196 |
| BsnI | GGCC | 1 cut(s) | 217 |
| Bso31I | GGTCTC | 1 cut(s) | 297 |
| BsoBI | CYCGRG | 1 cut(s) | 225 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| BspANI | GGCC | 1 cut(s) | 217 |
| BspCNI | CTCAG | 2 cut(s) | 74, 350 |
| BspPI | GGATC | 1 cut(s) | 287 |
| BspTNI | GGTCTC | 1 cut(s) | 297 |
| BsrI | ACTGG | 2 cut(s) | 154, 190 |
| BssECI | CCNNGG | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 292 |
| BssT1I | CCWWGG | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 1 cut(s) | 184 |
| BstBAI | YACGTR | 1 cut(s) | 376 |
| BstC8I | GCNNGC | 4 cut(s) | 79, 241, 362, 366 |
| BstDEI | CTNAG | 2 cut(s) | 61, 337 |
| BstF5I | GGATG | 1 cut(s) | 145 |
| BstHHI | GCGC | 3 cut(s) | 40, 121, 370 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMAI | GTCTC | 1 cut(s) | 297 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 35 |
| BstSNI | TACGTA | 1 cut(s) | 376 |
| BsuRI | GGCC | 1 cut(s) | 217 |
| BtsCI | GGATG | 1 cut(s) | 145 |
| BtsIMutI | CAGTG | 2 cut(s) | 61, 147 |
| Cac8I | GCNNGC | 4 cut(s) | 79, 241, 362, 366 |
| CaiI | CAGNNNCTG | 1 cut(s) | 385 |
| CfoI | GCGC | 3 cut(s) | 40, 121, 370 |
| Csp6I | GTAC | 1 cut(s) | 377 |
| CviAII | CATG | 3 cut(s) | 15, 41, 109 |
| CviQI | GTAC | 1 cut(s) | 377 |
| DdeI | CTNAG | 2 cut(s) | 61, 337 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| Eam1104I | CTCTTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 1 cut(s) | 184 |
| Eco105I | TACGTA | 1 cut(s) | 376 |
| Eco130I | CCWWGG | 1 cut(s) | 135 |
| Eco147I | AGGCCT | 1 cut(s) | 217 |
| Eco31I | GGTCTC | 1 cut(s) | 297 |
| Eco57I | CTGAAG | 1 cut(s) | 291 |
| Eco88I | CYCGRG | 1 cut(s) | 225 |
| EcoT14I | CCWWGG | 1 cut(s) | 135 |
| EcoT22I | ATGCAT | 1 cut(s) | 160 |
| ErhI | CCWWGG | 1 cut(s) | 135 |
| FaeI | CATG | 3 cut(s) | 18, 44, 112 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 202, 234, 390, 422 |
| FaqI | GGGAC | 1 cut(s) | 196 |
| FatI | CATG | 3 cut(s) | 14, 40, 108 |
| FokI | GGATG | 1 cut(s) | 152 |
| GlaI | GCGC | 3 cut(s) | 39, 120, 369 |
| GsaI | CCCAGC | 1 cut(s) | 203 |
| HaeIII | GGCC | 1 cut(s) | 217 |
| HhaI | GCGC | 3 cut(s) | 40, 121, 370 |
| Hin1II | CATG | 3 cut(s) | 18, 44, 112 |
| Hin6I | GCGC | 3 cut(s) | 38, 119, 368 |
| HinP1I | GCGC | 3 cut(s) | 38, 119, 368 |
| HincII | GTYRAC | 1 cut(s) | 166 |
| HindII | GTYRAC | 1 cut(s) | 166 |
| HindIII | AAGCTT | 2 cut(s) | 103, 399 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 2 cut(s) | 225, 269 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| HpyAV | CCTTC | 1 cut(s) | 266 |
| HpyCH4III | ACNGT | 1 cut(s) | 56 |
| HpyCH4IV | ACGT | 2 cut(s) | 375, 417 |
| HpyCH4V | TGCA | 4 cut(s) | 8, 158, 344, 448 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 35 |
| HpyF3I | CTNAG | 2 cut(s) | 61, 337 |
| HpySE526I | ACGT | 2 cut(s) | 375, 417 |
| Hsp92II | CATG | 3 cut(s) | 18, 44, 112 |
| HspAI | GCGC | 3 cut(s) | 38, 119, 368 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LmnI | GCTCC | 2 cut(s) | 271, 347 |
| LpnPI | CCDG | 9 cut(s) | 63, 135, 171, 185, 253, 282, 320, 324, 330 |
| MaeII | ACGT | 2 cut(s) | 375, 417 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MboII | GAAGA | 1 cut(s) | 201 |
| MluCI | AATT | 2 cut(s) | 31, 460 |
| MmeI | TCCRAC | 1 cut(s) | 320 |
| MnlI | CCTC | 2 cut(s) | 173, 207 |
| Mph1103I | ATGCAT | 1 cut(s) | 160 |
| MroXI | GAANNNNTTC | 1 cut(s) | 284 |
| MseI | TTAA | 3 cut(s) | 414, 459, 463 |
| MslI | CAYNNNNRTG | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 35 |
| NdeII | GATC | 1 cut(s) | 292 |
| NlaIII | CATG | 3 cut(s) | 18, 44, 112 |
| NsiI | ATGCAT | 1 cut(s) | 160 |
| PacI | TTAATTAA | 1 cut(s) | 463 |
| PaeR7I | CTCGAG | 1 cut(s) | 225 |
| PceI | AGGCCT | 1 cut(s) | 217 |
| PdmI | GAANNNNTTC | 1 cut(s) | 284 |
| Ppu21I | YACGTR | 1 cut(s) | 376 |
| PshBI | ATTAAT | 1 cut(s) | 459 |
| PspFI | CCCAGC | 1 cut(s) | 199 |
| PstNI | CAGNNNCTG | 1 cut(s) | 385 |
| RsaI | GTAC | 1 cut(s) | 378 |
| RsaNI | GTAC | 1 cut(s) | 377 |
| RseI | CAYNNNNRTG | 1 cut(s) | 248 |
| SaqAI | TTAA | 3 cut(s) | 414, 459, 463 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SetI | ASST | 9 cut(s) | 107, 133, 268, 343, 362, 378, 387, 403, 420 |
| Sfr274I | CTCGAG | 1 cut(s) | 225 |
| SlaI | CTCGAG | 1 cut(s) | 225 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 248 |
| SmlI | CTYRAG | 1 cut(s) | 225 |
| SmoI | CTYRAG | 1 cut(s) | 225 |
| SnaBI | TACGTA | 1 cut(s) | 376 |
| Sse9I | AATT | 2 cut(s) | 31, 460 |
| SseBI | AGGCCT | 1 cut(s) | 217 |
| StuI | AGGCCT | 1 cut(s) | 217 |
| StyI | CCWWGG | 1 cut(s) | 135 |
| TaaI | ACNGT | 1 cut(s) | 56 |
| TaiI | ACGT | 2 cut(s) | 378, 420 |
| TaqI | TCGA | 2 cut(s) | 205, 226 |
| TasI | AATT | 2 cut(s) | 31, 460 |
| Tru1I | TTAA | 3 cut(s) | 414, 459, 463 |
| Tru9I | TTAA | 3 cut(s) | 414, 459, 463 |
| TscAI | CASTG | 2 cut(s) | 61, 154 |
| TspDTI | ATGAA | 3 cut(s) | 97, 156, 415 |
| TspGWI | ACGGA | 1 cut(s) | 442 |
| TspRI | CASTG | 2 cut(s) | 61, 154 |
| VspI | ATTAAT | 1 cut(s) | 459 |
| XhoI | CTCGAG | 1 cut(s) | 225 |
| XmnI | GAANNNNTTC | 1 cut(s) | 284 |
| Zsp2I | ATGCAT | 1 cut(s) | 160 |