pycom17g14850

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0014890
Physical Location & Seq
Reverse (-)
12579450 .. 12584596
5147 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2853 bp
ATGGCTGAAGATCTGGAGAAACCATTGTTGGATCCTGAGAATTTCAATCGGGATGGTATCGATTTGGAACGCTTGCCATTGGGAGAAGTCTTCGAACAACTGAGGACATCACCACAAGGTCTTTCAACCGAAGATGCTGAAGCCAGATTGGTGATTTTTGGTTTTAACAAGCTTGAAGAGAAGACTGAGAACAAATTTTTGAAGTTCCTTGGTTTTATGTGGAACCCCTTGTCATGGGTTATGGAAGCTGCAGCTATAATGGCTCTTGTCCTCGCTAATGGCGGAGGTGAGGGTCCTGACTGGCAGGACTTTGTAGGGATTGTTATCCTGCTTATCATCAACTCAACGATTAGTTTCATAGAGGAGAATAATGCAGGAAATGCTGCATCAGCTCTAATGGATCGCTTAGCTCCGAAGACAAGGGTTCTCAGAGATGGGCGCTGGACAGAGCAAGATGCAGCTATTTTAGTACCAGGTGACATAATTAGCATTAAGCTCGGGGACATCATTCCGGCTGATGCTCGTCTGCTTGAAGGAGACGCGCTGAAAGTTGACCAGTCAGCTCTTACAGGAGAGTCTCTACCTGTGACCAAGAAGACAGGTGATGAAGTATTTTCTGGTTCAACATGTAAACATGGAGAGATAGAAGCTGTTGTGATCGCAACCGGAGTTAACTCCTTTTTCGGAAAGGCAGCACATTTGGTGGACTCCACTGAAGTTGTTGGACATTTCCAGCAGGTCCTTACCTCCATTGGGAATTTCTGCATTTGCTCTATTGCTGTGGGAATGATTCTTGAAATCATTGTCATGTTCCCAATACAGCACCGCTCTTACAGGGATGGGATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCGATCGCCATGCCAACGGTGTTATCTGTTACACTTGCCATTGGTTCTCATCGACTTTCTCAACAGGGTGCCATTACGAAAAGGATGACAGCAATTGAAGAGATGGCAGGAATGGATGTCCTCTGCAGTGACAAAACTGGAACTCTCACCCTGAATCGCCTAACAGTTGATAGAAACCTAGTCGAGGTTTTCAACAAAGATCTAGACAAAGACGCGGTCATCATGTTTGCAGCCAGAGCAGCTAGAATGGAGAACCAGGACGCTATTGATGCAGCCATCGTCAATATGCTTGCTGATCCAAAGGAGGCACGAGCAGGCATTACAGAAGTGCATTTTCTGCCCTTCAATCCGGTGGACAAGCGTACTGCTATTACATACATTGATTCAGAAGGTAACTGGTATCGGGCCAGCAAAGGAGCTCCGGAACAGATTCTAGATCTATGCCCGGAGAAAGACGAGATTGCTGGAAGGGTGCATTCAATTATTGAAAAATTTGCTGAAAGGGGATTGCGGTCTCTTGGAGTTGCCTTTCAGGAAGTTCCAGAAAAAACTAAGGATAGCCCTGGAGGTCCATGGACATTTGCTGGGTTGTTGCCCTTGATCGATCCTCCAAGGCATGACAGTGCTGAGACCATTCGTAGAGCGCTTAACCTTGGAGTCTGTGTAAAGATGATTACAGGTGATCAGTTGGCAATTGCAAAGGAGACAGGGCGGAGACTTGGTATGGGAACAAACATGTACCCCTCCTCTTCGTTATTAGGCCGCCACGTAGAAGAACATGAAGCTCTTCCTGTGGATGAGTTGATTGAGAAGGCTGATGGCTTTGCTGGTGTCTTCCCTGAACACAAGTATGAAATTGTAAAGATTTTACAAGAAAAGAAGCATGTGGTTGGGATGACTGGAGACGGAGTTAATGATGCGCCTGCTTTAAAGAAAGCAGACATTGGTATAGCAGTGGCAGATTCCACAGATGCTGCAAGAAGTGCTTCTGATATAGTCTTAACTGAGCCTGGATTGAGTGTGATTGTCAGTGCTGTCCTCACCAGTCGCGCTATATTCCAAAGAATGAAGAATTACACGATATATGCTGTCTCCATAACAATTAGGATTGTGCTTGGTTTCGTGCTTCTTGCATTGATCTGGGAATATGACTTCCCGCCTTTCATGGTTCTGATTATAGCCATACTGAATGACGGAACCATCATGACAATTTCGCAGGATCGCGTAAAGCCCTCCCCGAAGCCTGATAGCTGGAAGCTGAATGAGATATTTGCTACTGGCATTGTCATTGGCACATACCTTGCTTTAGTTACTGTATTGTTCTACTGGGTTGTTGTTGACACTGACTTCTTCGAGAGAACCTTCAATGTAAGAGATTTATCGAGCAGTAGTGAGGAAGTTTCGTCTGCTGTATATCTGCAAGTCAGTATCATCAGCCAGGCTCTCATATTTGTGACAAGAAGCCAGGGGTGGTCATTTCTTGAGAGGCCCGGAACTATGTTGATGTGCGCTTTTGTGGTGGCTCAACTGGTGGCAACTTTGATTGCTGTATATGCAACAATCAGCTTTGCATATATCAGCGGCATTGGATGGGGATGGGCCGGAATCATCTGGTTGTACAGTGTGATTTTCTACATTCCTTTGGACATCATTAAATTTGCAATTCGCTATGCTTTGACGGGGGATGCCTGGAATCTGTTATTCGATAGAAAGACAGCTTTTACTAATAAGAAAGACTATGGGAAGGAAGATAGGGCGGCTAAGTGGATACTTTCTCAGAAAAGCTTACAAGGGTTACAAGACTTTGAGATCAACAGGACAGGCAAGCGTTCTTCTTTGATTGCGGAACAGGCCAGGCGACGCGCTGAAATTGCCAGGCTCGGGGAGATACACACTCTGAGAGGACATGTAGAATCTGTACTGAGGCTCAAGAATTTGGACCTGAGTGCCATTCAATCAGCCCATACGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

951

Amino Acids

104.44

Weight (kDa)

5.29

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 24 - 87 5.9e-13 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 136 - 235 8.4e-32 P-type ATPase actuator domain
Hydrolase PF00702 331 - 607 7.3e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 379 - 499 9.8e-07 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 727
AccB1I GGYRCC 1 cut(s) 947
AccBSI CCGCTC 1 cut(s) 828
AccII CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
AccIII TCCGGA 1 cut(s) 1300
AclWI GGATC 7 cut(s) 26, 39, 408, 851, 1169, 1478, 2106
AcsI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2534, 2812
AcuI CTGAAG 3 cut(s) 27, 159, 735
AfaI GTAC 5 cut(s) 471, 1243, 1619, 2498, 2799
AfeI AGCGCT 1 cut(s) 1524
AfiI CCNNNNNNNGG 4 cut(s) 234, 753, 1063, 2760
AflIII ACRYGT 3 cut(s) 626, 1614, 2785
AjnI CCWGG 9 cut(s) 472, 1134, 1441, 1888, 2316, 2343, 2567, 2732, 2753
AjuI GAANNNNNNNTTGG 2 cut(s) 11, 43
Alw21I GWGCWC 1 cut(s) 1300
Alw26I GTCTC 8 cut(s) 531, 582, 1398, 1502, 1577, 1588, 1776, 1975
AlwI GGATC 7 cut(s) 26, 39, 408, 851, 1169, 1478, 2106
AlwNI CAGNNNCTG 1 cut(s) 1853
Ama87I CYCGRG 2 cut(s) 497, 2759
Aor13HI TCCGGA 1 cut(s) 1300
Aor51HI AGCGCT 1 cut(s) 1524
AoxI GGCC 5 cut(s) 1284, 1639, 2366, 2478, 2730
ApeKI GCWGC 9 cut(s) 248, 251, 383, 458, 692, 1109, 1118, 1151, 1853
ApoI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2534, 2812
ArsI GACNNNNNNTTYG 2 cut(s) 1080, 1112
Asp700I GAANNNNTTC 3 cut(s) 1308, 1665, 1864
AspLEI GCGC 7 cut(s) 441, 544, 1525, 1801, 1931, 2390, 2744
AspS9I GGNCC 7 cut(s) 293, 739, 1284, 1448, 2367, 2478, 2818
AsuC2I CCSGG 2 cut(s) 1325, 2370
AsuHPI GGTGA 8 cut(s) 102, 163, 299, 488, 614, 1018, 1571, 1912
AsuII TTCGAA 1 cut(s) 93
AvaI CYCGRG 2 cut(s) 497, 2759
AvaII GGWCC 4 cut(s) 293, 739, 1448, 2818
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 947
BanII GRGCYC 1 cut(s) 1300
BauI CACGAG 1 cut(s) 1188
BbsI GAAGAC 5 cut(s) 82, 188, 422, 602, 1705
Bbv12I GWGCWC 1 cut(s) 1300
BbvI GCAGC 9 cut(s) 235, 263, 370, 470, 704, 1121, 1130, 1163, 1840
BccI CCATC 9 cut(s) 47, 428, 833, 976, 1163, 1691, 2087, 2463, 2469
BcgI CGANNNNNNTGC 4 cut(s) 478, 512, 871, 905
BciT130I CCWGG 9 cut(s) 474, 1136, 1443, 1890, 2318, 2345, 2569, 2734, 2755
BciVI GTATCC 1 cut(s) 2640
BclI TGATCA 1 cut(s) 1561
BcnI CCSGG 2 cut(s) 1325, 2370
BcoDI GTCTC 8 cut(s) 531, 582, 1398, 1502, 1577, 1588, 1776, 1975
BfaI CTAG 4 cut(s) 1058, 1082, 1122, 1313
BfmI CTRYAG 2 cut(s) 249, 1003
BfoI RGCGCY 2 cut(s) 442, 1526
BfuAI ACCTGC 1 cut(s) 727
BfuI GTATCC 1 cut(s) 2640
BglII AGATCT 3 cut(s) 10, 1078, 1315
BlpI GCTNAGC 1 cut(s) 406
Bme18I GGWCC 4 cut(s) 293, 739, 1448, 2818
BmeT110I CYCGRG 2 cut(s) 497, 2759
BmgT120I GGNCC 7 cut(s) 293, 739, 1284, 1448, 2367, 2478, 2818
BmiI GGNNCC 5 cut(s) 33, 224, 294, 949, 2077
BmrI ACTGGG 1 cut(s) 2215
BmsI GCATC 8 cut(s) 124, 395, 445, 508, 1138, 1786, 1840, 2554
BmuI ACTGGG 1 cut(s) 2215
BpiI GAAGAC 5 cut(s) 82, 188, 422, 602, 1705
BpmI CTGGAG 3 cut(s) 35, 1464, 1800
Bpu1102I GCTNAGC 1 cut(s) 406
Bpu14I TTCGAA 1 cut(s) 93
BpuEI CTTGAG 2 cut(s) 2381, 2792
BpuMI CCSGG 2 cut(s) 1325, 2370
Bsa29I ATCGAT 2 cut(s) 60, 1482
BsaAI YACGTR 1 cut(s) 1648
BsaBI GATNNNNATC 1 cut(s) 323
BsaI GGTCTC 2 cut(s) 1398, 1502
BsaJI CCNNGG 6 cut(s) 208, 1441, 1451, 1490, 1531, 2344
BsaWI WCCGGW 3 cut(s) 665, 1228, 1300
BsaXI ACNNNNNCTCC 6 cut(s) 1527, 1557, 1585, 1615, 1773, 1803
Bsc4I CCNNNNNNNGG 4 cut(s) 234, 753, 1063, 2760
Bse1I ACTGG 9 cut(s) 305, 556, 1021, 1280, 1783, 1923, 2161, 2210, 2412
Bse8I GATNNNNATC 1 cut(s) 323
BseAI TCCGGA 1 cut(s) 1300
BseBI CCWGG 9 cut(s) 474, 1136, 1443, 1890, 2318, 2345, 2569, 2734, 2755
BseCI ATCGAT 2 cut(s) 60, 1482
BseDI CCNNGG 6 cut(s) 208, 1441, 1451, 1490, 1531, 2344
BseGI GGATG 9 cut(s) 58, 844, 969, 1000, 1681, 1779, 2474, 2480, 2569
BseJI GATNNNNATC 1 cut(s) 323
BseLI CCNNNNNNNGG 4 cut(s) 234, 753, 1063, 2760
BseNI ACTGG 9 cut(s) 305, 556, 1021, 1280, 1783, 1923, 2161, 2210, 2412
BseRI GAGGAG 2 cut(s) 377, 1615
BseXI GCAGC 9 cut(s) 235, 263, 370, 470, 704, 1121, 1130, 1163, 1840
BseYI CCCAGC 1 cut(s) 1463
Bsh1236I CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
Bsh1285I CGRYCG 1 cut(s) 885
BshFI GGCC 5 cut(s) 1286, 1641, 2368, 2480, 2732
BshNI GGYRCC 1 cut(s) 947
BshVI ATCGAT 2 cut(s) 60, 1482
BsiEI CGRYCG 1 cut(s) 885
BsiHKAI GWGCWC 1 cut(s) 1300
BsiHKCI CYCGRG 2 cut(s) 497, 2759
BsiSI CCGG 7 cut(s) 512, 666, 1229, 1301, 1325, 2370, 2481
BslFI GGGAC 1 cut(s) 515
BslI CCNNNNNNNGG 4 cut(s) 234, 753, 1063, 2760
BsmAI GTCTC 8 cut(s) 531, 582, 1398, 1502, 1577, 1588, 1776, 1975
BsmBI CGTCTC 2 cut(s) 531, 1776
BsmFI GGGAC 1 cut(s) 515
BsmI GAATGC 1 cut(s) 1354
BsnI GGCC 5 cut(s) 1286, 1641, 2368, 2480, 2732
Bso31I GGTCTC 2 cut(s) 1398, 1502
BsoBI CYCGRG 2 cut(s) 497, 2759
Bsp119I TTCGAA 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 1300
Bsp13I TCCGGA 1 cut(s) 1300
Bsp1407I TGTACA 1 cut(s) 2496
Bsp1720I GCTNAGC 1 cut(s) 406
Bsp19I CCATGG 1 cut(s) 1451
BspANI GGCC 5 cut(s) 1286, 1641, 2368, 2480, 2732
BspDI ATCGAT 2 cut(s) 60, 1482
BspEI TCCGGA 1 cut(s) 1300
BspFNI CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
BspHI TCATGA 1 cut(s) 2082
BspLI GGNNCC 5 cut(s) 33, 224, 294, 949, 2077
BspMAI CTGCAG 2 cut(s) 253, 1007
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 7 cut(s) 26, 39, 408, 851, 1169, 1478, 2106
BspQI GCTCTTC 1 cut(s) 1671
BspT104I TTCGAA 1 cut(s) 93
BspT107I GGYRCC 1 cut(s) 947
BspTNI GGTCTC 2 cut(s) 1398, 1502
BsrBI CCGCTC 1 cut(s) 828
BsrGI TGTACA 1 cut(s) 2496
BsrI ACTGG 9 cut(s) 305, 556, 1021, 1280, 1783, 1923, 2161, 2210, 2412
BssECI CCNNGG 6 cut(s) 208, 1441, 1451, 1490, 1531, 2344
BssSI CACGAG 1 cut(s) 1188
BssT1I CCWWGG 4 cut(s) 208, 1451, 1490, 1531
Bst2BI CACGAG 1 cut(s) 1188
Bst2UI CCWGG 9 cut(s) 474, 1136, 1443, 1890, 2318, 2345, 2569, 2734, 2755
Bst4CI ACNGT 6 cut(s) 898, 1045, 1502, 2194, 2501, 2848
Bst6I CTCTTC 4 cut(s) 171, 972, 1633, 1671
BstAPI GCANNNNNTGC 3 cut(s) 380, 1216, 1862
BstAUI TGTACA 1 cut(s) 2496
BstBAI YACGTR 1 cut(s) 1648
BstBI TTCGAA 1 cut(s) 93
BstC8I GCNNGC 6 cut(s) 74, 1170, 1195, 1288, 1803, 2705
BstDSI CCRYGG 1 cut(s) 1451
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 9 cut(s) 58, 844, 969, 1000, 1681, 1779, 2474, 2480, 2569
BstFNI CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
BstH2I RGCGCY 2 cut(s) 442, 1526
BstHHI GCGC 7 cut(s) 441, 544, 1525, 1801, 1931, 2390, 2744
BstMAI GTCTC 8 cut(s) 531, 582, 1398, 1502, 1577, 1588, 1776, 1975
BstMCI CGRYCG 1 cut(s) 885
BstNI CCWGG 9 cut(s) 474, 1136, 1443, 1890, 2318, 2345, 2569, 2734, 2755
BstNSI RCATGY 4 cut(s) 630, 1618, 1766, 2789
BstSFI CTRYAG 2 cut(s) 249, 1003
BstUI CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
BstV1I GCAGC 9 cut(s) 235, 263, 370, 470, 704, 1121, 1130, 1163, 1840
BstV2I GAAGAC 5 cut(s) 82, 188, 422, 602, 1705
BstX2I RGATCY 4 cut(s) 10, 31, 1078, 1315
BstYI RGATCY 4 cut(s) 10, 31, 1078, 1315
Bsu15I ATCGAT 2 cut(s) 60, 1482
BsuI GTATCC 1 cut(s) 2640
BsuRI GGCC 5 cut(s) 1286, 1641, 2368, 2480, 2732
BsuTUI ATCGAT 2 cut(s) 60, 1482
BtgI CCRYGG 1 cut(s) 1451
BtsCI GGATG 9 cut(s) 58, 844, 969, 1000, 1681, 1779, 2474, 2480, 2569
BtsI GCAGTG 2 cut(s) 1012, 1839
BtsIMutI CAGTG 7 cut(s) 711, 1012, 1507, 1839, 1915, 2220, 2506
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 6 cut(s) 74, 1170, 1195, 1288, 1803, 2705
CaiI CAGNNNCTG 1 cut(s) 1853
CciI TCATGA 1 cut(s) 2082
CfoI GCGC 7 cut(s) 441, 544, 1525, 1801, 1931, 2390, 2744
Cfr13I GGNCC 7 cut(s) 293, 739, 1284, 1448, 2367, 2478, 2818
ClaI ATCGAT 2 cut(s) 60, 1482
CseI GACGC 4 cut(s) 548, 1100, 1148, 2748
CsiI ACCWGGT 1 cut(s) 472
Csp6I GTAC 5 cut(s) 470, 1242, 1618, 2497, 2798
CspCI CAANNNNNGTGG 2 cut(s) 700, 735
CviQI GTAC 5 cut(s) 470, 1242, 1618, 2497, 2798
DraI TTTAAA 1 cut(s) 1809
Eam1104I CTCTTC 4 cut(s) 171, 972, 1633, 1671
EarI CTCTTC 4 cut(s) 171, 972, 1633, 1671
EciI GGCGGA 2 cut(s) 297, 1606
Ecl136II GAGCTC 1 cut(s) 1298
Eco130I CCWWGG 4 cut(s) 208, 1451, 1490, 1531
Eco24I GRGCYC 1 cut(s) 1300
Eco31I GGTCTC 2 cut(s) 1398, 1502
Eco47I GGWCC 4 cut(s) 293, 739, 1448, 2818
Eco47III AGCGCT 1 cut(s) 1524
Eco53kI GAGCTC 1 cut(s) 1298
Eco57I CTGAAG 3 cut(s) 27, 159, 735
Eco88I CYCGRG 2 cut(s) 497, 2759
EcoICRI GAGCTC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 2 cut(s) 293, 739
EcoRI GAATTC 1 cut(s) 876
EcoRII CCWGG 9 cut(s) 472, 1134, 1441, 1888, 2316, 2343, 2567, 2732, 2753
EcoT14I CCWWGG 4 cut(s) 208, 1451, 1490, 1531
EcoT38I GRGCYC 1 cut(s) 1300
ErhI CCWWGG 4 cut(s) 208, 1451, 1490, 1531
Esp3I CGTCTC 2 cut(s) 531, 1776
FalI AAGNNNNNCTT 2 cut(s) 1849, 1881
FaqI GGGAC 1 cut(s) 515
FauI CCCGC 1 cut(s) 2043
FbaI TGATCA 1 cut(s) 1561
FokI GGATG 9 cut(s) 65, 851, 976, 1007, 1688, 1786, 2481, 2487, 2576
FriOI GRGCYC 1 cut(s) 1300
FspBI CTAG 4 cut(s) 1058, 1082, 1122, 1313
GlaI GCGC 7 cut(s) 440, 543, 1524, 1800, 1930, 2389, 2743
GsaI CCCAGC 1 cut(s) 1467
GsuI CTGGAG 3 cut(s) 35, 1464, 1800
HaeII RGCGCY 2 cut(s) 442, 1526
HaeIII GGCC 5 cut(s) 1286, 1641, 2368, 2480, 2732
HapII CCGG 7 cut(s) 512, 666, 1229, 1301, 1325, 2370, 2481
HgaI GACGC 4 cut(s) 548, 1100, 1148, 2748
HhaI GCGC 7 cut(s) 441, 544, 1525, 1801, 1931, 2390, 2744
Hin6I GCGC 7 cut(s) 439, 542, 1523, 1799, 1929, 2388, 2742
HinP1I GCGC 7 cut(s) 439, 542, 1523, 1799, 1929, 2388, 2742
HincII GTYRAC 3 cut(s) 553, 673, 2218
HindII GTYRAC 3 cut(s) 553, 673, 2218
HindIII AAGCTT 2 cut(s) 170, 2662
HpaI GTTAAC 1 cut(s) 673
HpaII CCGG 7 cut(s) 512, 666, 1229, 1301, 1325, 2370, 2481
HphI GGTGA 8 cut(s) 102, 163, 299, 488, 614, 1018, 1571, 1912
Hpy166II GTNNAC 6 cut(s) 553, 632, 673, 706, 1234, 2218
Hpy188I TCNGA 9 cut(s) 414, 431, 686, 882, 1267, 1870, 2052, 2658, 2778
Hpy8I GTNNAC 6 cut(s) 553, 632, 673, 706, 1234, 2218
Hpy99I CGWCG 1 cut(s) 2742
HpyAV CCTTC 8 cut(s) 527, 863, 1231, 1262, 1341, 1684, 2251, 2617
HpyCH4III ACNGT 6 cut(s) 898, 1045, 1502, 2194, 2501, 2848
HpyCH4IV ACGT 1 cut(s) 1647
HpySE526I ACGT 1 cut(s) 1647
HspAI GCGC 7 cut(s) 439, 542, 1523, 1799, 1929, 2388, 2742
Kpn2I TCCGGA 1 cut(s) 1300
Ksp22I TGATCA 1 cut(s) 1561
KspAI GTTAAC 1 cut(s) 673
LguI GCTCTTC 1 cut(s) 1671
LmnI GCTCC 3 cut(s) 415, 1295, 1303
Lsp1109I GCAGC 9 cut(s) 235, 263, 370, 470, 704, 1121, 1130, 1163, 1840
LweI GCATC 8 cut(s) 124, 395, 445, 508, 1138, 1786, 1840, 2554
MabI ACCWGGT 1 cut(s) 472
MaeI CTAG 4 cut(s) 1058, 1082, 1122, 1313
MaeII ACGT 1 cut(s) 1647
MaeIII GTNAC 8 cut(s) 476, 586, 907, 1007, 1271, 2188, 2332, 2673
MbiI CCGCTC 1 cut(s) 828
MfeI CAATTG 2 cut(s) 972, 1572
MflI RGATCY 4 cut(s) 10, 31, 1078, 1315
MhlI GDGCHC 1 cut(s) 1300
MlyI GAGTC 3 cut(s) 584, 701, 1545
MmeI TCCRAC 2 cut(s) 9, 703
MroI TCCGGA 1 cut(s) 1300
MroXI GAANNNNTTC 3 cut(s) 1308, 1665, 1864
MseI TTAA 9 cut(s) 165, 492, 672, 866, 1527, 1791, 1808, 1880, 2532
MslI CAYNNNNRTG 4 cut(s) 806, 1500, 1728, 2330
MspA1I CMGCKG 1 cut(s) 2460
MspI CCGG 7 cut(s) 512, 666, 1229, 1301, 1325, 2370, 2481
MunI CAATTG 2 cut(s) 972, 1572
Mva1269I GAATGC 1 cut(s) 1354
MvaI CCWGG 9 cut(s) 474, 1136, 1443, 1890, 2318, 2345, 2569, 2734, 2755
MvnI CGCG 5 cut(s) 542, 1094, 1929, 2103, 2742
NciI CCSGG 2 cut(s) 1325, 2370
NcoI CCATGG 1 cut(s) 1451
NlaIV GGNNCC 5 cut(s) 33, 224, 294, 949, 2077
NmuCI GTSAC 4 cut(s) 476, 586, 1007, 2332
NspI RCATGY 4 cut(s) 630, 1618, 1766, 2789
NspV TTCGAA 1 cut(s) 93
PagI TCATGA 1 cut(s) 2082
PciI ACATGT 3 cut(s) 626, 1614, 2785
PciSI GCTCTTC 1 cut(s) 1671
PctI GAATGC 1 cut(s) 1354
PdmI GAANNNNTTC 3 cut(s) 1308, 1665, 1864
PfeI GAWTC 8 cut(s) 790, 1033, 1262, 1309, 1841, 2484, 2572, 2792
PflFI GACNNNGTC 1 cut(s) 1094
Ple19I CGATCG 1 cut(s) 885
PleI GAGTC 3 cut(s) 583, 701, 1544
PpsI GAGTC 3 cut(s) 583, 701, 1544
Ppu21I YACGTR 1 cut(s) 1648
PpuMI RGGWCCY 2 cut(s) 293, 739
PscI ACATGT 3 cut(s) 626, 1614, 2785
Psp124BI GAGCTC 1 cut(s) 1300
Psp5II RGGWCCY 2 cut(s) 293, 739
Psp6I CCWGG 9 cut(s) 472, 1134, 1441, 1888, 2316, 2343, 2567, 2732, 2753
PspFI CCCAGC 1 cut(s) 1463
PspGI CCWGG 9 cut(s) 472, 1134, 1441, 1888, 2316, 2343, 2567, 2732, 2753
PspN4I GGNNCC 5 cut(s) 33, 224, 294, 949, 2077
PspPI GGNCC 7 cut(s) 293, 739, 1284, 1448, 2367, 2478, 2818
PspPPI RGGWCCY 2 cut(s) 293, 739
PstI CTGCAG 2 cut(s) 253, 1007
PstNI CAGNNNCTG 1 cut(s) 1853
PsuI RGATCY 4 cut(s) 10, 31, 1078, 1315
PsyI GACNNNGTC 1 cut(s) 1094
PvuI CGATCG 1 cut(s) 885
RsaI GTAC 5 cut(s) 471, 1243, 1619, 2498, 2799
RsaNI GTAC 5 cut(s) 470, 1242, 1618, 2497, 2798
RseI CAYNNNNRTG 4 cut(s) 806, 1500, 1728, 2330
SacI GAGCTC 1 cut(s) 1300
SapI GCTCTTC 1 cut(s) 1671
SaqAI TTAA 9 cut(s) 165, 492, 672, 866, 1527, 1791, 1808, 1880, 2532
Sau96I GGNCC 7 cut(s) 293, 739, 1284, 1448, 2367, 2478, 2818
SchI GAGTC 3 cut(s) 584, 701, 1545
SduI GDGCHC 1 cut(s) 1300
SexAI ACCWGGT 1 cut(s) 472
SfaNI GCATC 8 cut(s) 124, 395, 445, 508, 1138, 1786, 1840, 2554
SfcI CTRYAG 2 cut(s) 249, 1003
SfuI TTCGAA 1 cut(s) 93
SinI GGWCC 4 cut(s) 293, 739, 1448, 2818
SmiMI CAYNNNNRTG 4 cut(s) 806, 1500, 1728, 2330
SmlI CTYRAG 2 cut(s) 2360, 2807
SmoI CTYRAG 2 cut(s) 2360, 2807
SspMI CTAG 4 cut(s) 1058, 1082, 1122, 1313
SstI GAGCTC 1 cut(s) 1300
StyI CCWWGG 4 cut(s) 208, 1451, 1490, 1531
TaaI ACNGT 6 cut(s) 898, 1045, 1502, 2194, 2501, 2848
TaiI ACGT 1 cut(s) 1650
TaqI TCGA 8 cut(s) 60, 93, 931, 1062, 1482, 2232, 2261, 2583
TatI WGTACW 2 cut(s) 2496, 2797
TauI GCSGC 3 cut(s) 1644, 2463, 2639
TfiI GAWTC 8 cut(s) 790, 1033, 1262, 1309, 1841, 2484, 2572, 2792
Tru1I TTAA 9 cut(s) 165, 492, 672, 866, 1527, 1791, 1808, 1880, 2532
Tru9I TTAA 9 cut(s) 165, 492, 672, 866, 1527, 1791, 1808, 1880, 2532
TscAI CASTG 7 cut(s) 718, 1012, 1507, 1839, 1915, 2227, 2506
TseFI GTSAC 4 cut(s) 476, 586, 1007, 2332
TseI GCWGC 9 cut(s) 248, 251, 383, 458, 692, 1109, 1118, 1151, 1853
Tsp45I GTSAC 4 cut(s) 476, 586, 1007, 2332
TspDTI ATGAA 6 cut(s) 346, 621, 1674, 1746, 1961, 2032
TspGWI ACGGA 2 cut(s) 1800, 2088
TspRI CASTG 7 cut(s) 718, 1012, 1507, 1839, 1915, 2227, 2506
Tth111I GACNNNGTC 1 cut(s) 1094
VpaK11BI GGWCC 4 cut(s) 293, 739, 1448, 2818
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2534, 2812
XbaI TCTAGA 2 cut(s) 1081, 1312
XceI RCATGY 4 cut(s) 630, 1618, 1766, 2789
XmnI GAANNNNTTC 3 cut(s) 1308, 1665, 1864
XspI CTAG 4 cut(s) 1058, 1082, 1122, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.