Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009385

Physical Location & Seq

Genomic Coordinates Reverse (-)

21448531 .. 21459748

Gene Structure 11218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGAGAGAGTATGGGGTGGTGGATTCATGGACAAAGAAATTCTCTATTGATAGAAATGTCACCCCAAATTTCCTCGTTATACAGATTATGGGGTGCAGGAAGAATGGCGAGTTTCTGTTAGAAATGTATGACCATGGAGGGAAGACTGGAAAGTTGGTCTCTCATGATCCTAAGAACAACAGAAATGAATTTCTAGGAATTCATACAAATCCAGATGGTGGCAGAGGCGTTGGTTGTGTTAACAATGGTTTTGAGGGTGATGGTAGTGGAAAATGTGGTGGTGCTGGTGGCCATGGTATGGTGGCGTTGGTGATGTTAGTGGTGGACCTGGTGGTGCTGGTAGCGGCGGAGGTGCTTGTGGTTGTGGTGAGACATTGGAGTGAGAAATCAGAACCGAATAATCTCTGGGGGCGGCGGCGATTCGACCGACTGAAAGTTGCGATTAGCGCAATGGCGGTGACAGAAGGTGATGTTCATACACAAGAAGAGTACTTTGACGTGCTCACCAAAACCGGCCAGAAGACCGGCATTTCCAAGCCCAGGGGAGATGTTCATCGAGACGGGGATTACCATCGAGCTGTTCATGTGTGGATTTTTGCTGAGAGTACACAAGAGCTGCTTATCCAAAACCGTTACTACTGCAAGGATTCGTGGGCGGGACGGTGGGATATCTCTAGCGCTGGACACATATACGCTGGTGATTCGTCACTTACAACAGCTCGGAGGGAGCTTCAAGAAGAGCTGGGTATAGTACTTCCAAAGGATGCATTTGAAATGCTATTCGTTTATCTTGAAGAGTGTGTGATAAATGATGGAAAATTCATTAACAATGAATTCAATGATGTATATTTGGTAACCACTGTGAATCCGATCGATCTCGAAGCATTTACTCTTCAGGAAACGGAAGTCTCTGCTGTTAAATATATTTCTTATGAGGACTACAGAAACTTACTTGCTAAAGAAGACCCTGATTTCTTCCCCTACGACGTAAATGGGCAATATGGTCAGCTTTTTGACATAATTGCACGGAGGTACAAGGAGAACACTATAGGTCGAAGTTTAACACTACAAAAGCAACTCCAACGTTATGCTCCTGTTACCCTCAGTGCCGAGTTAACAGGTCTTACAGAGGCAGACAGGGAGGCCCTGGTGTTACTAACTAAGGCTGCAGCAATTATAGATCAAATCTTTTACCTTCAGGTTTGGTGCTGTAATCCGGTTCTAAGGGATTGGTTGAAGAAGCATGCAGATGCATCACAGTTAGACAAGTTGAAATGGATGTACTATGTTATTAATAAGGGTCCATGGTCGTCCCTTGATGAAAATGAGGCATTTTTGACAACTGCAGATTCGGCTATAAAGTTGCTTCCTGAAGCAACAAAACGAGTTACTGGGTGGAAGGGACTTGAATACAAAGCTGCGTTTCCTATGCTGAAGCCTCCTGGTGCAAACTTCTATCCGCCAGACATGGACAAAGTGGAATTTGAATTGTGGAAGAAAAGTCTAACAGAGGACCAAAAACAAGCTGCAACAAGCTTTTTCACAGTTATTAAAAGACAAAGTGAATTAAGTCTGGATTCATCCTTGTATGGCAGTACAGATGAAAGCACAAGTCATTCAGTGACATCCACTCATGATCTATATAGTGTTCCTTTCTCCCAAGAGTATAATGCTTTCCTCACACAAGCAGCTGAGTTATTGCATAAAGCTGGTGAATTGGCCAGTTCCCCCAGGTATGAGTCTGAAGACTTTCATTTCTTAAGTTGTTTCATTACTGATTATGAGGACTCTAAGCTGGATGTTACTATTGGTCCGTATGAAACATACGAAGATGCTCTTTTTGGATACAAGGCTACTTTTGAAGCATTTATTGGAGTTCGGGATGACAAGGCAACTGCTCAAGTAAAGCTTTTTGGTGACAATTTGCAGGTTTTGGAACAAAATCTGCCACTGGACAGTGTCTACAAGTCCAAAGATGTGATATGTGCTTCTATTCGAGTCATCGATCTTATTTACAATGCCGGAGATGTCAAGGGTCCTCAAACTGCTGCTTTTAATCTACCAAATGACGAGCGTATTGTAAAAGATCGAGGAACATCATTGGTCATGCTTAAGAATATCTCAGAGGCCAAGTTCAAGCACATTCTTCTGCCTATAGCCGATGTTTGCATTACAAAGGAACAACGGGAACTTGTAGATTTTGAATCTTTTTTCACTCACACAATTTGCCATGAGTGCAGCCATGGGATTGGACCTCATAACATAACACTTCCAGATGGTAGAAAGTCAACAGTGAGATTGGAACTGCAAGAACTCCACTCAGCTCTGGAAGAAGCAAAAGCTGATATAGTTGGCCTTTGGGCATTGAAGTTCCTAATCCACAAGGACATGCTCTCAAAGAGTTTATTGAAGTCTATGTATGTTTCTTTTCTTGCTGGATGCTTCCGCTCCGTACGGTTTGGTCTTGAAGAAGCTCATGGAAAAGGACAAGCGTTGCAATTTAACTGGTTGTATGAGGAAGGAGCCTTTATTTTGAATCCTGATGAAACATTTTCTGTTGACTTTACCAAGGTTGAAGGTGCAGTTGAGAACCTGAGTAGGGCAATACTCACCATACAAGCAAAAGGTGACAAGAATGCTGCAAATGCACTGCTTCAGAAATACTGCATAATGACGAACCCAATAAAAGTTGCTCTGCAGAAATTAGAGAAAATTCAGGTCCCCGTGGATATAGTTCCCACATTCCCGGTAATTGATAAAATATTGGAGCAAAGACAACAAATGGATCATGAGACAGCCAAGGCTTCGATGACTTTTTATCTCGCAGTAATCTTGTTGAGTGGTGCGATAATTCTCATTGCTATGCTCTATGAACTCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

961

Amino Acids

108.15

Weight (kDa)

5.35

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUDIX	PF00293	190 - 326	2.6e-14	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79690 AT1G79690
fragaria_vesca	FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160
malus_domestica	MD17G1227300.v1.1
prunus_persica	Prupe.3G104700_v2.0.a1
pyrus_communis	pycom17g23060
rosa_chinensis	RchiOBHm_Chr2g0132121
rosa_laevigata	RLG00000019229
rosa_multiflora	Rmu_sc0002005.1_g000003 Rmu_sc0009538.1_g000018 Rmu_sc0033552.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112380
rosa_rugosa	Rorug02G0302400
rosa_samantha	Rh2AG355500 Rh2BG361600 Rh2CG339000
rosa_wichuraiana	Rw2G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1918
AccB7I	CCANNNNNTGG	2 cut(s)	218, 298
AccBSI	CCGCTC	1 cut(s)	2448
AccI	GTMKAC	1 cut(s)	1962
AciI	CCGC	8 cut(s)	344, 347, 412, 415, 455, 656, 1460, 2446
AclI	AACGTT	1 cut(s)	1084
AclWI	GGATC	2 cut(s)	161, 2793
AcoI	YGGCCR	3 cut(s)	289, 514, 1719
AcsI	RAATTY	8 cut(s)	38, 67, 188, 198, 818, 833, 1481, 2712
AcuI	CTGAAG	6 cut(s)	878, 1181, 1392, 1454, 1764, 2639
AfaI	GTAC	7 cut(s)	491, 607, 753, 1034, 1283, 1597, 2454
AfeI	AGCGCT	1 cut(s)	679
AfiI	CCNNNNNNNGG	4 cut(s)	218, 298, 540, 2599
AflII	CTTAAG	2 cut(s)	1759, 2111
AjiI	CACGTC	1 cut(s)	499
AjnI	CCWGG	5 cut(s)	327, 539, 1146, 1441, 1730
AjuI	GAANNNNNNNTTGG	2 cut(s)	1854, 1886
Alw21I	GWGCWC	1 cut(s)	504
Alw26I	GTCTC	5 cut(s)	163, 364, 552, 913, 2786
AlwI	GGATC	2 cut(s)	161, 2793
Aor51HI	AGCGCT	1 cut(s)	679
AoxI	GGCC	6 cut(s)	289, 514, 1143, 1719, 2127, 2353
ApeKI	GCWGC	9 cut(s)	616, 1166, 1169, 1418, 1526, 1688, 2048, 2238, 2639
ApoI	RAATTY	8 cut(s)	38, 67, 188, 198, 818, 833, 1481, 2712
AseI	ATTAAT	1 cut(s)	1293
Asp700I	GAANNNNTTC	1 cut(s)	1749
AspLEI	GCGC	2 cut(s)	449, 680
AspS9I	GGNCC	8 cut(s)	325, 1144, 1301, 1513, 1811, 2036, 2252, 2719
AsuC2I	CCSGG	1 cut(s)	2747
AvaII	GGWCC	7 cut(s)	325, 1301, 1513, 1811, 2036, 2252, 2719
BalI	TGGCCA	2 cut(s)	291, 1721
BbsI	GAAGAC	4 cut(s)	149, 527, 969, 1752
Bbv12I	GWGCWC	1 cut(s)	504
BbvI	GCAGC	9 cut(s)	603, 1153, 1181, 1405, 1513, 1700, 2035, 2250, 2626
BccI	CCATC	5 cut(s)	209, 254, 579, 806, 2270
BciT130I	CCWGG	5 cut(s)	329, 541, 1148, 1443, 1732
BciVI	GTATCC	1 cut(s)	1838
BcnI	CCSGG	1 cut(s)	2747
BcoDI	GTCTC	5 cut(s)	163, 364, 552, 913, 2786
BfaI	CTAG	2 cut(s)	194, 675
BfmI	CTRYAG	6 cut(s)	940, 1047, 1167, 1344, 2154, 2696
BfoI	RGCGCY	1 cut(s)	681
BfrI	CTTAAG	2 cut(s)	1759, 2111
BfuAI	ACCTGC	1 cut(s)	1918
BfuI	GTATCC	1 cut(s)	1838
BmcAI	AGTACT	2 cut(s)	491, 753
Bme1390I	CCNGG	6 cut(s)	329, 541, 1148, 1443, 1732, 2747
Bme18I	GGWCC	7 cut(s)	325, 1301, 1513, 1811, 2036, 2252, 2719
BmgBI	CACGTC	1 cut(s)	499
BmgT120I	GGNCC	8 cut(s)	325, 1144, 1301, 1513, 1811, 2036, 2252, 2719
BmiI	GGNNCC	4 cut(s)	1302, 2037, 2524, 2721
BmrFI	CCNGG	6 cut(s)	329, 541, 1148, 1443, 1732, 2747
BmrI	ACTGGG	1 cut(s)	1401
BmsI	GCATC	5 cut(s)	754, 1240, 1262, 1822, 2429
BmuI	ACTGGG	1 cut(s)	1401
BpiI	GAAGAC	4 cut(s)	149, 527, 969, 1752
BpuEI	CTTGAG	1 cut(s)	1884
BpuMI	CCSGG	1 cut(s)	2747
Bsa29I	ATCGAT	2 cut(s)	873, 2004
BsaBI	GATNNNNATC	2 cut(s)	552, 570
BsaI	GGTCTC	1 cut(s)	163
BsaWI	WCCGGW	1 cut(s)	1216
Bsc4I	CCNNNNNNNGG	4 cut(s)	218, 298, 540, 2599
Bse118I	RCCGGY	2 cut(s)	512, 524
Bse1I	ACTGG	5 cut(s)	151, 1396, 1722, 1956, 2510
Bse3DI	GCAATG	2 cut(s)	456, 2856
Bse8I	GATNNNNATC	2 cut(s)	552, 570
BseBI	CCWGG	5 cut(s)	329, 541, 1148, 1443, 1732
BseCI	ATCGAT	2 cut(s)	873, 2004
BseGI	GGATG	7 cut(s)	769, 1284, 1580, 1625, 1804, 1888, 2444
BseJI	GATNNNNATC	2 cut(s)	552, 570
BseLI	CCNNNNNNNGG	4 cut(s)	218, 298, 540, 2599
BseMI	GCAATG	2 cut(s)	456, 2856
BseMII	CTCAG	6 cut(s)	591, 1117, 1683, 2136, 2334, 2585
BseNI	ACTGG	5 cut(s)	151, 1396, 1722, 1956, 2510
BseRI	GAGGAG	1 cut(s)	2867
BseXI	GCAGC	9 cut(s)	603, 1153, 1181, 1405, 1513, 1700, 2035, 2250, 2626
BseYI	CCCAGC	1 cut(s)	742
BsgI	GTGCAG	3 cut(s)	115, 2257, 2601
Bsh1285I	CGRYCG	2 cut(s)	427, 873
BshFI	GGCC	6 cut(s)	291, 516, 1145, 1721, 2129, 2355
BshVI	ATCGAT	2 cut(s)	873, 2004
BsiEI	CGRYCG	2 cut(s)	427, 873
BsiHKAI	GWGCWC	1 cut(s)	504
BsiSI	CCGG	5 cut(s)	513, 525, 1217, 2022, 2747
BsiWI	CGTACG	1 cut(s)	2452
BslFI	GGGAC	4 cut(s)	672, 1297, 1416, 2705
BslI	CCNNNNNNNGG	4 cut(s)	218, 298, 540, 2599
BsmAI	GTCTC	5 cut(s)	163, 364, 552, 913, 2786
BsmBI	CGTCTC	1 cut(s)	552
BsmFI	GGGAC	4 cut(s)	672, 1297, 1416, 2705
BsmI	GAATGC	1 cut(s)	2641
BsnI	GGCC	6 cut(s)	291, 516, 1145, 1721, 2129, 2355
Bso31I	GGTCTC	1 cut(s)	163
Bsp1286I	GDGCHC	1 cut(s)	504
Bsp143I	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
Bsp19I	CCATGG	4 cut(s)	133, 292, 1304, 2242
BspACI	CCGC	8 cut(s)	344, 347, 412, 415, 455, 656, 1460, 2446
BspANI	GGCC	6 cut(s)	291, 516, 1145, 1721, 2129, 2355
BspCNI	CTCAG	6 cut(s)	592, 1116, 1684, 2135, 2333, 2586
BspDI	ATCGAT	2 cut(s)	873, 2004
BspHI	TCATGA	3 cut(s)	163, 1633, 2788
BspLI	GGNNCC	4 cut(s)	1302, 2037, 2524, 2721
BspMAI	CTGCAG	3 cut(s)	1171, 1348, 2700
BspMI	ACCTGC	1 cut(s)	1918
BspPI	GGATC	2 cut(s)	161, 2793
BspQI	GCTCTTC	1 cut(s)	732
BspTI	CTTAAG	2 cut(s)	1759, 2111
BspTNI	GGTCTC	1 cut(s)	163
BsrBI	CCGCTC	1 cut(s)	2448
BsrDI	GCAATG	2 cut(s)	456, 2856
BsrFI	RCCGGY	2 cut(s)	512, 524
BsrI	ACTGG	5 cut(s)	151, 1396, 1722, 1956, 2510
BssAI	RCCGGY	2 cut(s)	512, 524
BssMI	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
BssT1I	CCWWGG	6 cut(s)	133, 292, 1304, 2242, 2568, 2799
Bst2UI	CCWGG	5 cut(s)	329, 541, 1148, 1443, 1732
Bst4CI	ACNGT	8 cut(s)	632, 663, 862, 1260, 1546, 1958, 2293, 2457
Bst6I	CTCTTC	4 cut(s)	480, 732, 789, 897
BstAFI	CTTAAG	2 cut(s)	1759, 2111
BstC8I	GCNNGC	1 cut(s)	1245
BstDSI	CCRYGG	5 cut(s)	133, 292, 1304, 2242, 2724
BstEII	GGTNACC	1 cut(s)	853
BstF5I	GGATG	7 cut(s)	769, 1284, 1580, 1625, 1804, 1888, 2444
BstH2I	RGCGCY	1 cut(s)	681
BstHHI	GCGC	2 cut(s)	449, 680
BstKTI	GATC	8 cut(s)	169, 873, 877, 1183, 1639, 2008, 2089, 2788
BstMAI	GTCTC	5 cut(s)	163, 364, 552, 913, 2786
BstMBI	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
BstMCI	CGRYCG	2 cut(s)	427, 873
BstMWI	GCNNNNNNNGC	4 cut(s)	446, 1352, 2235, 2645
BstNI	CCWGG	5 cut(s)	329, 541, 1148, 1443, 1732
BstNSI	RCATGY	2 cut(s)	1247, 2392
BstPI	GGTNACC	1 cut(s)	853
BstSCI	CCNGG	6 cut(s)	327, 539, 1146, 1441, 1730, 2745
BstSFI	CTRYAG	6 cut(s)	940, 1047, 1167, 1344, 2154, 2696
BstV1I	GCAGC	9 cut(s)	603, 1153, 1181, 1405, 1513, 1700, 2035, 2250, 2626
BstV2I	GAAGAC	4 cut(s)	149, 527, 969, 1752
BstXI	CCANNNNNNTGG	1 cut(s)	2249
Bsu15I	ATCGAT	2 cut(s)	873, 2004
BsuI	GTATCC	1 cut(s)	1838
BsuRI	GGCC	6 cut(s)	291, 516, 1145, 1721, 2129, 2355
BsuTUI	ATCGAT	2 cut(s)	873, 2004
BtgI	CCRYGG	5 cut(s)	133, 292, 1304, 2242, 2724
BtrI	CACGTC	1 cut(s)	499
BtsCI	GGATG	7 cut(s)	769, 1284, 1580, 1625, 1804, 1888, 2444
BtsI	GCAGTG	1 cut(s)	2648
BtsIMutI	CAGTG	7 cut(s)	858, 1111, 1626, 1949, 1963, 2298, 2648
BveI	ACCTGC	1 cut(s)	1918
Cac8I	GCNNGC	1 cut(s)	1245
CciI	TCATGA	3 cut(s)	163, 1633, 2788
CfoI	GCGC	2 cut(s)	449, 680
Cfr10I	RCCGGY	2 cut(s)	512, 524
Cfr13I	GGNCC	8 cut(s)	325, 1144, 1301, 1513, 1811, 2036, 2252, 2719
ClaI	ATCGAT	2 cut(s)	873, 2004
CsiI	ACCWGGT	1 cut(s)	327
Csp6I	GTAC	7 cut(s)	490, 606, 752, 1033, 1282, 1596, 2453
CviQI	GTAC	7 cut(s)	490, 606, 752, 1033, 1282, 1596, 2453
DpnI	GATC	8 cut(s)	168, 872, 876, 1182, 1638, 2007, 2088, 2787
DpnII	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
EaeI	YGGCCR	3 cut(s)	289, 514, 1719
Eam1104I	CTCTTC	4 cut(s)	480, 732, 789, 897
EarI	CTCTTC	4 cut(s)	480, 732, 789, 897
EciI	GGCGGA	2 cut(s)	362, 1449
Eco130I	CCWWGG	6 cut(s)	133, 292, 1304, 2242, 2568, 2799
Eco31I	GGTCTC	1 cut(s)	163
Eco32I	GATATC	1 cut(s)	670
Eco47I	GGWCC	7 cut(s)	325, 1301, 1513, 1811, 2036, 2252, 2719
Eco47III	AGCGCT	1 cut(s)	679
Eco57I	CTGAAG	6 cut(s)	878, 1181, 1392, 1454, 1764, 2639
Eco91I	GGTNACC	1 cut(s)	853
EcoO109I	RGGNCCY	3 cut(s)	1144, 2036, 2719
EcoO65I	GGTNACC	1 cut(s)	853
EcoRI	GAATTC	2 cut(s)	198, 833
EcoRII	CCWGG	5 cut(s)	327, 539, 1146, 1441, 1730
EcoRV	GATATC	1 cut(s)	670
EcoT14I	CCWWGG	6 cut(s)	133, 292, 1304, 2242, 2568, 2799
EcoT22I	ATGCAT	2 cut(s)	769, 1255
ErhI	CCWWGG	6 cut(s)	133, 292, 1304, 2242, 2568, 2799
Esp3I	CGTCTC	1 cut(s)	552
FalI	AAGNNNNNCTT	6 cut(s)	603, 635, 1821, 1853, 1893, 1925
FaqI	GGGAC	4 cut(s)	672, 1297, 1416, 2705
FauI	CCCGC	1 cut(s)	649
FblI	GTMKAC	1 cut(s)	1962
FokI	GGATG	7 cut(s)	776, 1291, 1567, 1612, 1811, 1895, 2451
FspBI	CTAG	2 cut(s)	194, 675
GlaI	GCGC	2 cut(s)	448, 679
GsaI	CCCAGC	1 cut(s)	746
HaeII	RGCGCY	1 cut(s)	681
HaeIII	GGCC	6 cut(s)	291, 516, 1145, 1721, 2129, 2355
HapII	CCGG	5 cut(s)	513, 525, 1217, 2022, 2747
HhaI	GCGC	2 cut(s)	449, 680
Hin6I	GCGC	2 cut(s)	447, 678
HinP1I	GCGC	2 cut(s)	447, 678
HincII	GTYRAC	4 cut(s)	241, 1116, 2289, 2560
HindII	GTYRAC	4 cut(s)	241, 1116, 2289, 2560
HindIII	AAGCTT	2 cut(s)	1534, 1907
HpaI	GTTAAC	2 cut(s)	241, 1116
HpaII	CCGG	5 cut(s)	513, 525, 1217, 2022, 2747
Hpy166II	GTNNAC	7 cut(s)	241, 325, 608, 1116, 1963, 2289, 2560
Hpy188I	TCNGA	7 cut(s)	391, 723, 870, 1744, 2125, 2658, 2882
Hpy8I	GTNNAC	7 cut(s)	241, 325, 608, 1116, 1963, 2289, 2560
Hpy99I	CGWCG	1 cut(s)	989
HpyAV	CCTTC	5 cut(s)	458, 1205, 1393, 2513, 2570
HpyCH4III	ACNGT	8 cut(s)	632, 663, 862, 1260, 1546, 1958, 2293, 2457
HpyCH4IV	ACGT	3 cut(s)	498, 987, 1084
HpyF10VI	GCNNNNNNNGC	4 cut(s)	446, 1352, 2235, 2645
HpySE526I	ACGT	3 cut(s)	498, 987, 1084
HspAI	GCGC	2 cut(s)	447, 678
KspAI	GTTAAC	2 cut(s)	241, 1116
Kzo9I	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
LguI	GCTCTTC	1 cut(s)	732
LmnI	GCTCC	5 cut(s)	727, 1096, 2453, 2522, 2767
Lsp1109I	GCAGC	9 cut(s)	603, 1153, 1181, 1405, 1513, 1700, 2035, 2250, 2626
LweI	GCATC	5 cut(s)	754, 1240, 1262, 1822, 2429
MabI	ACCWGGT	1 cut(s)	327
MaeI	CTAG	2 cut(s)	194, 675
MaeII	ACGT	3 cut(s)	498, 987, 1084
MalI	GATC	8 cut(s)	168, 872, 876, 1182, 1638, 2007, 2088, 2787
MbiI	CCGCTC	1 cut(s)	2448
MboI	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
MhlI	GDGCHC	1 cut(s)	504
MlsI	TGGCCA	2 cut(s)	291, 1721
MluNI	TGGCCA	2 cut(s)	291, 1721
MlyI	GAGTC	3 cut(s)	1748, 1781, 2007
MmeI	TCCRAC	1 cut(s)	1105
Mox20I	TGGCCA	2 cut(s)	291, 1721
Mph1103I	ATGCAT	2 cut(s)	769, 1255
MroXI	GAANNNNTTC	1 cut(s)	1749
MscI	TGGCCA	2 cut(s)	291, 1721
MslI	CAYNNNNRTG	3 cut(s)	378, 1248, 2861
Msp20I	TGGCCA	2 cut(s)	291, 1721
MspA1I	CMGCKG	1 cut(s)	1691
MspCI	CTTAAG	2 cut(s)	1759, 2111
MspI	CCGG	5 cut(s)	513, 525, 1217, 2022, 2747
MspR9I	CCNGG	6 cut(s)	329, 541, 1148, 1443, 1732, 2747
Mva1269I	GAATGC	1 cut(s)	2641
MvaI	CCWGG	5 cut(s)	329, 541, 1148, 1443, 1732
MwoI	GCNNNNNNNGC	4 cut(s)	446, 1352, 2235, 2645
NciI	CCSGG	1 cut(s)	2747
NcoI	CCATGG	4 cut(s)	133, 292, 1304, 2242
NdeII	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
NlaIV	GGNNCC	4 cut(s)	1302, 2037, 2524, 2721
NmeAIII	GCCGAG	1 cut(s)	1135
NmuCI	GTSAC	6 cut(s)	58, 457, 705, 1621, 1916, 2627
NsiI	ATGCAT	2 cut(s)	769, 1255
NspI	RCATGY	2 cut(s)	1247, 2392
PaeI	GCATGC	1 cut(s)	1247
PagI	TCATGA	3 cut(s)	163, 1633, 2788
PasI	CCCWGGG	1 cut(s)	540
PciSI	GCTCTTC	1 cut(s)	732
PctI	GAATGC	1 cut(s)	2641
PdmI	GAANNNNTTC	1 cut(s)	1749
PfeI	GAWTC	9 cut(s)	23, 420, 647, 701, 865, 1349, 1577, 2204, 2536
Pfl23II	CGTACG	1 cut(s)	2452
PflFI	GACNNNGTC	1 cut(s)	1958
PflMI	CCANNNNNTGG	2 cut(s)	218, 298
Ple19I	CGATCG	1 cut(s)	873
PleI	GAGTC	3 cut(s)	1747, 1781, 2006
PpsI	GAGTC	3 cut(s)	1747, 1781, 2006
PpuMI	RGGWCCY	2 cut(s)	2036, 2719
PshBI	ATTAAT	1 cut(s)	1293
Psp1406I	AACGTT	1 cut(s)	1084
Psp5II	RGGWCCY	2 cut(s)	2036, 2719
Psp6I	CCWGG	5 cut(s)	327, 539, 1146, 1441, 1730
PspEI	GGTNACC	1 cut(s)	853
PspFI	CCCAGC	1 cut(s)	742
PspGI	CCWGG	5 cut(s)	327, 539, 1146, 1441, 1730
PspLI	CGTACG	1 cut(s)	2452
PspN4I	GGNNCC	4 cut(s)	1302, 2037, 2524, 2721
PspPI	GGNCC	8 cut(s)	325, 1144, 1301, 1513, 1811, 2036, 2252, 2719
PspPPI	RGGWCCY	2 cut(s)	2036, 2719
PstI	CTGCAG	3 cut(s)	1171, 1348, 2700
PsyI	GACNNNGTC	1 cut(s)	1958
PvuI	CGATCG	1 cut(s)	873
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	7 cut(s)	491, 607, 753, 1034, 1283, 1597, 2454
RsaNI	GTAC	7 cut(s)	490, 606, 752, 1033, 1282, 1596, 2453
RseI	CAYNNNNRTG	3 cut(s)	378, 1248, 2861
SapI	GCTCTTC	1 cut(s)	732
Sau3AI	GATC	8 cut(s)	166, 870, 874, 1180, 1636, 2005, 2086, 2785
Sau96I	GGNCC	8 cut(s)	325, 1144, 1301, 1513, 1811, 2036, 2252, 2719
ScaI	AGTACT	2 cut(s)	491, 753
SchI	GAGTC	3 cut(s)	1748, 1781, 2007
ScrFI	CCNGG	6 cut(s)	329, 541, 1148, 1443, 1732, 2747
SduI	GDGCHC	1 cut(s)	504
SexAI	ACCWGGT	1 cut(s)	327
SfaNI	GCATC	5 cut(s)	754, 1240, 1262, 1822, 2429
SfcI	CTRYAG	6 cut(s)	940, 1047, 1167, 1344, 2154, 2696
SinI	GGWCC	7 cut(s)	325, 1301, 1513, 1811, 2036, 2252, 2719
SmiMI	CAYNNNNRTG	3 cut(s)	378, 1248, 2861
SmlI	CTYRAG	3 cut(s)	1759, 1899, 2111
SmoI	CTYRAG	3 cut(s)	1759, 1899, 2111
SphI	GCATGC	1 cut(s)	1247
SsiI	CCGC	8 cut(s)	344, 347, 412, 415, 455, 656, 1460, 2446
SspI	AATATT	1 cut(s)	2763
SspMI	CTAG	2 cut(s)	194, 675
StyD4I	CCNGG	6 cut(s)	327, 539, 1146, 1441, 1730, 2745
StyI	CCWWGG	6 cut(s)	133, 292, 1304, 2242, 2568, 2799
TaaI	ACNGT	8 cut(s)	632, 663, 862, 1260, 1546, 1958, 2293, 2457
TaiI	ACGT	3 cut(s)	501, 990, 1087
TaqII	GACCGA	1 cut(s)	441
TatI	WGTACW	5 cut(s)	489, 605, 751, 1281, 1595
TauI	GCSGC	3 cut(s)	347, 415, 418
TfiI	GAWTC	9 cut(s)	23, 420, 647, 701, 865, 1349, 1577, 2204, 2536
TscAI	CASTG	7 cut(s)	865, 1111, 1626, 1956, 1963, 2298, 2655
TseFI	GTSAC	6 cut(s)	58, 457, 705, 1621, 1916, 2627
TseI	GCWGC	9 cut(s)	616, 1166, 1169, 1418, 1526, 1688, 2048, 2238, 2639
Tsp45I	GTSAC	6 cut(s)	58, 457, 705, 1621, 1916, 2627
TspGWI	ACGGA	4 cut(s)	917, 1042, 1803, 2440
TspRI	CASTG	7 cut(s)	865, 1111, 1626, 1956, 1963, 2298, 2655
Tth111I	GACNNNGTC	1 cut(s)	1958
Van91I	CCANNNNNTGG	2 cut(s)	218, 298
Vha464I	CTTAAG	2 cut(s)	1759, 2111
VpaK11BI	GGWCC	7 cut(s)	325, 1301, 1513, 1811, 2036, 2252, 2719
VspI	ATTAAT	1 cut(s)	1293
XapI	RAATTY	8 cut(s)	38, 67, 188, 198, 818, 833, 1481, 2712
XceI	RCATGY	2 cut(s)	1247, 2392
XmiI	GTMKAC	1 cut(s)	1962
XmnI	GAANNNNTTC	1 cut(s)	1749
XspI	CTAG	2 cut(s)	194, 675
ZrmI	AGTACT	2 cut(s)	491, 753
Zsp2I	ATGCAT	2 cut(s)	769, 1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.