pycom17g25570

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
23683030 .. 23686131
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 798 bp
ATGGTTTTGATAACTATTAAAAATCCATTAATCTTGCAGGGTTCATTTGGTGAATCTGAAAGGGTCAAATGGCGTGGAACATGGGTTGTTAAGACTGTTGTCAAGAGCCAAATATGCAATCCTGTAAAAATGATCCTCTCTGCTAAGGATAACACTCTCCTCCGAGAACTTAGACATCCCAATATTTTGCAATTTCTTGGTTCGATAGTGCAGCAGGAAGAGATGGTTCTGATTACTGAGTATCTACCAAAAGGTAACCTGGAAAACATTTTGAGGCAAAAAGCTCGACTTGATTTGCCTACTGCTTTTCGCTACGCACTTGATATTGCTAGGGGAATGAACTATCTTCACCAACACAAGCCCTGCCCAATAGTTCACAACCATTTGGGTACCAGAAACTTGTTGCAGGACGAAGGTGGACACTTGAAGATCGGCGAGTATTGGGTTCAAATGTTGTACGAGCCAATTAACCCAGATCAAAATGGGAAAAGAAGCAATCCCCGTAACATCGAAAACCTAAAAGACGACACCAAGAAAGATGTTCGTACATTTGGTTTCATATTTTATCAGATGCTAGAAGGAGGGCACTTCATGAACAGCACGAACTCTGACACCAAAAATGAGGAACCTGTTGATTTTAAGCCGAAATTCCACTTAAGTCGATGTACAAACAGAATTCATGAGTTGATAGAGGATTGTACAAGTAATAATCCTTCGGAAATACCCTCATTTGGTACTGTCATCGAGATTCTGGAAGAGGAATCGTCATCTTTTGGGAGAGCTGTATGCCCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
Pfam Domains
Protein Families

Protein Analysis

266

Amino Acids

30.46

Weight (kDa)

7.11

Isoelectric Point (pI)

51.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 13 - 250 2.1e-28 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 13 - 244 5.4e-22 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g27960
malus_domestica MD00G1053900.v1.1
prunus_persica Prupe.3G150700_v2.0.a1
pyrus_communis pycom17g25570
rosa_chinensis RchiOBHm_Chr5g0011771
rosa_laevigata RLG00000031861
rosa_roxburghii Rroxscaffold_1G00064780
rosa_rugosa Rorug04G0458900
rosa_samantha Rh5AG090600 Rh5BG086100 Rh5CG099900 Rh5DG086300
rosa_wichuraiana Rw5G007910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 389
AccB1I GGYRCC 1 cut(s) 389
AclWI GGATC 1 cut(s) 127
AcsI RAATTY 2 cut(s) 647, 675
AfaI GTAC 6 cut(s) 391, 458, 547, 667, 700, 736
AfiI CCNNNNNNNGG 1 cut(s) 731
AflII CTTAAG 1 cut(s) 655
AgsI TTSAA 2 cut(s) 427, 449
AjnI CCWGG 1 cut(s) 258
AluBI AGCT 2 cut(s) 284, 782
AluI AGCT 2 cut(s) 284, 782
AlwI GGATC 1 cut(s) 127
ApeKI GCWGC 1 cut(s) 211
ApoI RAATTY 2 cut(s) 647, 675
AseI ATTAAT 1 cut(s) 29
Asp718I GGTACC 1 cut(s) 389
AsuHPI GGTGA 2 cut(s) 62, 341
BaeGI GKGCMC 1 cut(s) 588
BanI GGYRCC 1 cut(s) 389
BarI GAAGNNNNNNTAC 2 cut(s) 697, 729
BbvI GCAGC 1 cut(s) 223
BccI CCATC 1 cut(s) 217
BcgI CGANNNNNNTGC 2 cut(s) 266, 300
BciT130I CCWGG 1 cut(s) 260
BfaI CTAG 2 cut(s) 330, 575
BfrI CTTAAG 1 cut(s) 655
BisI GCNGC 1 cut(s) 212
BlsI GCNGC 1 cut(s) 213
Bme1390I CCNGG 1 cut(s) 260
BmiI GGNNCC 2 cut(s) 391, 627
BmrFI CCNGG 1 cut(s) 260
BmsI GCATC 1 cut(s) 561
BoxI GACNNNNGTC 1 cut(s) 98
Bpu10I CCTNAGC 1 cut(s) 144
Bsc4I CCNNNNNNNGG 1 cut(s) 731
BseBI CCWGG 1 cut(s) 260
BseGI GGATG 1 cut(s) 175
BseLI CCNNNNNNNGG 1 cut(s) 731
BseMII CTCAG 1 cut(s) 228
BseRI GAGGAG 1 cut(s) 149
BseSI GKGCMC 1 cut(s) 588
BseXI GCAGC 1 cut(s) 223
BsgI GTGCAG 1 cut(s) 230
BshNI GGYRCC 1 cut(s) 389
BslI CCNNNNNNNGG 1 cut(s) 731
Bsp1286I GDGCHC 1 cut(s) 588
Bsp1407I TGTACA 2 cut(s) 665, 698
Bsp143I GATC 3 cut(s) 132, 429, 475
BspCNI CTCAG 1 cut(s) 229
BspHI TCATGA 2 cut(s) 591, 679
BspLI GGNNCC 2 cut(s) 391, 627
BspPI GGATC 1 cut(s) 127
BspT107I GGYRCC 1 cut(s) 389
BspTI CTTAAG 1 cut(s) 655
BsrGI TGTACA 2 cut(s) 665, 698
BssMI GATC 3 cut(s) 132, 429, 475
Bst2UI CCWGG 1 cut(s) 260
Bst4CI ACNGT 2 cut(s) 97, 739
Bst6I CTCTTC 2 cut(s) 213, 750
BstAFI CTTAAG 1 cut(s) 655
BstAUI TGTACA 2 cut(s) 665, 698
BstDEI CTNAG 3 cut(s) 144, 170, 237
BstEII GGTNACC 1 cut(s) 254
BstF5I GGATG 1 cut(s) 175
BstKTI GATC 3 cut(s) 135, 432, 478
BstMBI GATC 3 cut(s) 132, 429, 475
BstMWI GCNNNNNNNGC 1 cut(s) 114
BstNI CCWGG 1 cut(s) 260
BstPAI GACNNNNGTC 1 cut(s) 98
BstPI GGTNACC 1 cut(s) 254
BstSCI CCNGG 1 cut(s) 258
BstSLI GKGCMC 1 cut(s) 588
BstV1I GCAGC 1 cut(s) 223
BtsCI GGATG 1 cut(s) 175
CciI TCATGA 2 cut(s) 591, 679
Csp6I GTAC 6 cut(s) 390, 457, 546, 666, 699, 735
CspCI CAANNNNNGTGG 2 cut(s) 55, 90
CviAII CATG 3 cut(s) 81, 592, 680
CviJI RGCY 6 cut(s) 108, 284, 361, 463, 643, 782
CviKI_1 RGCY 6 cut(s) 108, 284, 361, 463, 643, 782
CviQI GTAC 6 cut(s) 390, 457, 546, 666, 699, 735
DdeI CTNAG 3 cut(s) 144, 170, 237
DpnI GATC 3 cut(s) 134, 431, 477
DpnII GATC 3 cut(s) 132, 429, 475
Eam1104I CTCTTC 2 cut(s) 213, 750
EarI CTCTTC 2 cut(s) 213, 750
Eco91I GGTNACC 1 cut(s) 254
EcoO65I GGTNACC 1 cut(s) 254
EcoRI GAATTC 1 cut(s) 675
EcoRII CCWGG 1 cut(s) 258
FaeI CATG 3 cut(s) 84, 595, 683
FaiI YATR 6 cut(s) 82, 115, 560, 593, 681, 787
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FatI CATG 3 cut(s) 80, 591, 679
Fnu4HI GCNGC 1 cut(s) 212
FokI GGATG 1 cut(s) 162
Fsp4HI GCNGC 1 cut(s) 212
FspBI CTAG 2 cut(s) 330, 575
GluI GCNGC 1 cut(s) 212
Hin1II CATG 3 cut(s) 84, 595, 683
HinfI GANTC 3 cut(s) 53, 748, 761
HphI GGTGA 2 cut(s) 62, 341
Hpy166II GTNNAC 2 cut(s) 376, 419
Hpy188I TCNGA 6 cut(s) 58, 164, 231, 570, 610, 718
Hpy188III TCNNGA 5 cut(s) 103, 592, 680, 745, 752
Hpy8I GTNNAC 2 cut(s) 376, 419
HpyAV CCTTC 3 cut(s) 407, 572, 723
HpyCH4III ACNGT 2 cut(s) 97, 739
HpyCH4V TGCA 5 cut(s) 37, 117, 190, 211, 406
HpyF10VI GCNNNNNNNGC 1 cut(s) 114
HpyF3I CTNAG 3 cut(s) 144, 170, 237
Hsp92II CATG 3 cut(s) 84, 595, 683
KpnI GGTACC 1 cut(s) 393
Kzo9I GATC 3 cut(s) 132, 429, 475
Lsp1109I GCAGC 1 cut(s) 223
LweI GCATC 1 cut(s) 561
MaeI CTAG 2 cut(s) 330, 575
MaeIII GTNAC 2 cut(s) 254, 503
MalI GATC 3 cut(s) 134, 431, 477
MboI GATC 3 cut(s) 132, 429, 475
MboII GAAGA 4 cut(s) 230, 338, 439, 767
MhlI GDGCHC 1 cut(s) 588
MluCI AATT 4 cut(s) 191, 465, 647, 675
MnlI CCTC 8 cut(s) 146, 170, 267, 575, 616, 685, 736, 751
MseI TTAA 6 cut(s) 18, 29, 90, 468, 639, 656
MspCI CTTAAG 1 cut(s) 655
MspR9I CCNGG 1 cut(s) 260
MvaI CCWGG 1 cut(s) 260
MwoI GCNNNNNNNGC 1 cut(s) 114
NdeII GATC 3 cut(s) 132, 429, 475
NlaIII CATG 3 cut(s) 84, 595, 683
NlaIV GGNNCC 2 cut(s) 391, 627
PagI TCATGA 2 cut(s) 591, 679
PfeI GAWTC 3 cut(s) 53, 748, 761
PkrI GCNGC 1 cut(s) 213
PshAI GACNNNNGTC 1 cut(s) 98
PshBI ATTAAT 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 258
PspEI GGTNACC 1 cut(s) 254
PspGI CCWGG 1 cut(s) 258
PspN4I GGNNCC 2 cut(s) 391, 627
RsaI GTAC 6 cut(s) 391, 458, 547, 667, 700, 736
RsaNI GTAC 6 cut(s) 390, 457, 546, 666, 699, 735
SaqAI TTAA 6 cut(s) 18, 29, 90, 468, 639, 656
SatI GCNGC 1 cut(s) 212
Sau3AI GATC 3 cut(s) 132, 429, 475
ScrFI CCNGG 1 cut(s) 260
SduI GDGCHC 1 cut(s) 588
SetI ASST 7 cut(s) 256, 261, 286, 418, 519, 631, 784
SfaNI GCATC 1 cut(s) 561
SmlI CTYRAG 1 cut(s) 655
SmoI CTYRAG 1 cut(s) 655
Sse9I AATT 4 cut(s) 191, 465, 647, 675
SspI AATATT 1 cut(s) 184
SspMI CTAG 2 cut(s) 330, 575
StyD4I CCNGG 1 cut(s) 258
TaaI ACNGT 2 cut(s) 97, 739
TaqI TCGA 5 cut(s) 203, 286, 510, 661, 744
TasI AATT 4 cut(s) 191, 465, 647, 675
TatI WGTACW 2 cut(s) 665, 698
TfiI GAWTC 3 cut(s) 53, 748, 761
Tru1I TTAA 6 cut(s) 18, 29, 90, 468, 639, 656
Tru9I TTAA 6 cut(s) 18, 29, 90, 468, 639, 656
TseI GCWGC 1 cut(s) 211
TspDTI ATGAA 6 cut(s) 33, 353, 547, 580, 608, 668
Vha464I CTTAAG 1 cut(s) 655
VspI ATTAAT 1 cut(s) 29
XapI RAATTY 2 cut(s) 647, 675
XspI CTAG 2 cut(s) 330, 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.