RchiOBHm_Chr5g0069671

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0012971
Physical Location & Seq
Forward (+)
75491851 .. 75494721
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1515 bp
ATGCGAATCTCTCCGAGAACCACCGCTCGATCGCCGAGTTACATTCTCCCCTCCGTCATCGGCTTGTGCTGTCTCTCTCTTCTGTTCATGCTCTATAAGGTGAACGATTTCGCCACTCAGACCAGGACAGTCGCCGGCCACAACCTAGAGCCGACGCCGTGGCACCTCTTCAAGCCCAAGACCTTCAACCACGACGCGCTCCCCAGCCGGGCCTACAAGCTCCTCCAGTGCTCCTACCTCGCCTGCCGCTACAGAAACCAAGGCAACGACACGGAGGAAGAAGAAGAGCATCGACGTTCTGCTACTTCCGTTGCCAAAGCCCCGAAATGCCCGGAGTTTTTCCGGTGGATTCACCAGGATCTGGAGCCGTGGGCCAAGACCAAGATTTCTAAGGCTCATGTTGAGGAGGCAAAGAGATACGCTGCTTTCCGAGTGGTGATATCTCAAGGGAAGTTGTATGTGGACTTGTACTACGCTTGTGTGCAGAGCCGGGCTATGTTTACGATTTGGGGGTTGTTGCAGATGCTTAAGAGGTACCCTGGGAGGGTTCCTGATGTGGATTTTATGTTTGATTGCATGGACAAGCCTAGCATTAAGAAGACCGAGCATGTCGCAAAGCCTTTGCCGCTGCTCCGGTATTGCACCAATGACGACCACTTTGATATCCCATTTCCTGATTGGTCTTTCTGGGGATGGCCAGAAACAAATATAGAGCCGTGGACTGAGGAGTTCCAGGCTATCAAACTGGGTGGTCAGGAAACGACTTGGAGAAAGAAGGAGCTTTTGGCATATTGGAAAGGAAATCCAGATGTTGGATCCCATGTTCGTGAAGAGTTACTCAACTGTAATGATTCAAAGACGTATAGAGCGCAGATAATGCGTCAGGATTGGGATGAGGAAGCAAAGGCTGGTTTCAAGCAGTCCGAACTATCTAAGCAGTGCAATCATCGGTATAAGATCTATGCTGAAGGCTATGCTTGGTCTGTAAGTTTGAAATATATCTTATCATGCGGTTCTCTGGCATTAGTAATAACACCAGAATATGAGGATTTCTTCAGCCGCGGCCTCTTTCCCAAGGTTAACTATTGGCCCATCTCTCCTAATGCAATATGTCCTTCCATAAAATCTGCTGTTGACTGGGGTCATGGACACCTAGCTGAGGCTCAGGCAATAGGAAGAAGAGGGCAGCAGTATATGGAAAACCTAAACATGGATCGAGTCTATGATTACATGTTTCATCTCATCACCAAGTACTCAAAGTTGCAGGACTTCAAGCCAGTCCCTCCACGTAATGCCATGGAAGTATGTGCAGATTCTGTGCTTTGTCTTGCTGATGACTCGAAACAGAGGGAATATCTTGAAAAGACAAGGGAAAACTCTGTTCCCGCCACCCCATGCACTCTCCAGCCTCCTGATAGTAATCTCATCAAGAAATGGAAGAAAGAAAAGAAAGATGTATTTCAGACTGTGGAGGATATGAATCTTGTAAATGAGATACCTGGGCCATTGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

504

Amino Acids

58.57

Weight (kDa)

8.35

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 107 - 493 7.3e-147 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 534
AccB1I GGYRCC 2 cut(s) 162, 534
AccB7I CCANNNNNTGG 2 cut(s) 361, 812
AccBSI CCGCTC 1 cut(s) 26
AccII CGCG 2 cut(s) 197, 1062
AciI CCGC 7 cut(s) 24, 247, 626, 1011, 1060, 1062, 1386
AclWI GGATC 4 cut(s) 366, 810, 823, 1221
AcoI YGGCCR 2 cut(s) 136, 695
AcuI CTGAAG 2 cut(s) 987, 1039
AcyI GRCGYC 1 cut(s) 155
AfaI GTAC 3 cut(s) 470, 536, 1253
AfiI CCNNNNNNNGG 6 cut(s) 208, 361, 544, 812, 1159, 1210
AflII CTTAAG 1 cut(s) 527
AflIII ACRYGT 1 cut(s) 1230
AgsI TTSAA 7 cut(s) 172, 187, 855, 916, 994, 1273, 1361
AjnI CCWGG 5 cut(s) 122, 354, 538, 732, 1498
AjuI GAANNNNNNNTTGG 2 cut(s) 767, 799
AloI GAACNNNNNNTCC 2 cut(s) 807, 839
AluBI AGCT 3 cut(s) 220, 781, 1157
AluI AGCT 3 cut(s) 220, 781, 1157
Alw21I GWGCWC 1 cut(s) 233
Alw26I GTCTC 1 cut(s) 77
AlwI GGATC 4 cut(s) 366, 810, 823, 1221
AlwNI CAGNNNCTG 2 cut(s) 361, 1316
AoxI GGCC 7 cut(s) 136, 210, 372, 695, 1063, 1088, 1502
ApeKI GCWGC 3 cut(s) 422, 628, 1186
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
Asp700I GAANNNNTTC 1 cut(s) 107
Asp718I GGTACC 1 cut(s) 534
AspLEI GCGC 2 cut(s) 199, 871
AspS9I GGNCC 4 cut(s) 210, 372, 1089, 1502
AsuC2I CCSGG 3 cut(s) 209, 332, 491
AsuHPI GGTGA 4 cut(s) 112, 344, 448, 1237
BalI TGGCCA 1 cut(s) 697
BamHI GGATCC 1 cut(s) 815
BanI GGYRCC 2 cut(s) 162, 534
BbsI GAAGAC 1 cut(s) 605
Bbv12I GWGCWC 1 cut(s) 233
BbvCI CCTCAGC 1 cut(s) 1158
BbvI GCAGC 3 cut(s) 409, 615, 1198
BccI CCATC 2 cut(s) 687, 1100
BceAI ACGGC 3 cut(s) 142, 352, 700
BciT130I CCWGG 5 cut(s) 124, 356, 540, 734, 1500
BcnI CCSGG 3 cut(s) 209, 332, 491
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 3 cut(s) 146, 588, 1154
BfmI CTRYAG 1 cut(s) 250
BfrI CTTAAG 1 cut(s) 527
BglII AGATCT 1 cut(s) 957
BisI GCNGC 7 cut(s) 247, 423, 626, 629, 1060, 1063, 1187
BlsI GCNGC 7 cut(s) 248, 424, 627, 630, 1061, 1064, 1188
BmcAI AGTACT 1 cut(s) 1253
Bme1390I CCNGG 8 cut(s) 124, 209, 332, 356, 491, 540, 734, 1500
BmgT120I GGNCC 4 cut(s) 210, 372, 1089, 1502
BmiI GGNNCC 5 cut(s) 164, 366, 536, 549, 817
BmrFI CCNGG 8 cut(s) 124, 209, 332, 356, 491, 540, 734, 1500
BmrI ACTGGG 2 cut(s) 755, 1147
BmsI GCATC 2 cut(s) 298, 513
BmuI ACTGGG 2 cut(s) 755, 1147
BoxI GACNNNNGTC 1 cut(s) 1140
BpiI GAAGAC 1 cut(s) 605
BpmI CTGGAG 3 cut(s) 209, 383, 1388
Bpu10I CCTNAGC 2 cut(s) 1158, 1164
BpuEI CTTGAG 1 cut(s) 429
BpuMI CCSGG 3 cut(s) 209, 332, 491
BsaAI YACGTR 1 cut(s) 1289
BsaBI GATNNNNATC 2 cut(s) 1419, 1479
BsaHI GRCGYC 1 cut(s) 155
BsaWI WCCGGW 2 cut(s) 342, 633
Bsc4I CCNNNNNNNGG 6 cut(s) 208, 361, 544, 812, 1159, 1210
Bse118I RCCGGY 1 cut(s) 134
Bse1I ACTGG 4 cut(s) 226, 750, 1142, 1277
Bse3DI GCAATG 1 cut(s) 1505
Bse8I GATNNNNATC 2 cut(s) 1419, 1479
BseBI CCWGG 5 cut(s) 124, 356, 540, 734, 1500
BseGI GGATG 2 cut(s) 698, 898
BseJI GATNNNNATC 2 cut(s) 1419, 1479
BseLI CCNNNNNNNGG 6 cut(s) 208, 361, 544, 812, 1159, 1210
BseMI GCAATG 1 cut(s) 1505
BseMII CTCAG 4 cut(s) 131, 714, 1149, 1178
BseNI ACTGG 4 cut(s) 226, 750, 1142, 1277
BseRI GAGGAG 3 cut(s) 212, 419, 740
BseXI GCAGC 3 cut(s) 409, 615, 1198
BseYI CCCAGC 1 cut(s) 203
BsgI GTGCAG 2 cut(s) 503, 1329
Bsh1236I CGCG 2 cut(s) 197, 1062
Bsh1285I CGRYCG 1 cut(s) 32
BshFI GGCC 7 cut(s) 138, 212, 374, 697, 1065, 1090, 1504
BshNI GGYRCC 2 cut(s) 162, 534
BsiEI CGRYCG 1 cut(s) 32
BsiHKAI GWGCWC 1 cut(s) 233
BsiSI CCGG 6 cut(s) 135, 208, 332, 343, 490, 634
BslFI GGGAC 1 cut(s) 1265
BslI CCNNNNNNNGG 6 cut(s) 208, 361, 544, 812, 1159, 1210
BsmAI GTCTC 1 cut(s) 77
BsmFI GGGAC 1 cut(s) 1265
BsnI GGCC 7 cut(s) 138, 212, 374, 697, 1065, 1090, 1504
Bsp1286I GDGCHC 1 cut(s) 233
Bsp143I GATC 5 cut(s) 29, 358, 815, 957, 1213
Bsp19I CCATGG 1 cut(s) 1296
BspACI CCGC 7 cut(s) 24, 247, 626, 1011, 1060, 1062, 1386
BspANI GGCC 7 cut(s) 138, 212, 374, 697, 1065, 1090, 1504
BspCNI CTCAG 4 cut(s) 130, 715, 1150, 1177
BspFNI CGCG 2 cut(s) 197, 1062
BspLI GGNNCC 5 cut(s) 164, 366, 536, 549, 817
BspPI GGATC 4 cut(s) 366, 810, 823, 1221
BspQI GCTCTTC 1 cut(s) 279
BspT107I GGYRCC 2 cut(s) 162, 534
BspTI CTTAAG 1 cut(s) 527
BsrBI CCGCTC 1 cut(s) 26
BsrDI GCAATG 1 cut(s) 1505
BsrFI RCCGGY 1 cut(s) 134
BsrI ACTGG 4 cut(s) 226, 750, 1142, 1277
BssAI RCCGGY 1 cut(s) 134
BssMI GATC 5 cut(s) 29, 358, 815, 957, 1213
BssNI GRCGYC 1 cut(s) 155
BssT1I CCWWGG 3 cut(s) 259, 1074, 1296
Bst2UI CCWGG 5 cut(s) 124, 356, 540, 734, 1500
Bst4CI ACNGT 3 cut(s) 130, 845, 1468
Bst6I CTCTTC 5 cut(s) 84, 173, 279, 825, 1174
BstACI GRCGYC 1 cut(s) 155
BstAFI CTTAAG 1 cut(s) 527
BstAPI GCANNNNNTGC 1 cut(s) 877
BstBAI YACGTR 1 cut(s) 1289
BstC8I GCNNGC 2 cut(s) 136, 244
BstDEI CTNAG 6 cut(s) 117, 390, 723, 933, 1158, 1164
BstDSI CCRYGG 5 cut(s) 158, 368, 716, 1060, 1296
BstENI CCTNNNNNAGG 1 cut(s) 1157
BstF5I GGATG 2 cut(s) 698, 898
BstFNI CGCG 2 cut(s) 197, 1062
BstHHI GCGC 2 cut(s) 199, 871
BstKTI GATC 5 cut(s) 32, 361, 818, 960, 1216
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 5 cut(s) 29, 358, 815, 957, 1213
BstMCI CGRYCG 1 cut(s) 32
BstMWI GCNNNNNNNGC 2 cut(s) 625, 877
BstNI CCWGG 5 cut(s) 124, 356, 540, 734, 1500
BstNSI RCATGY 2 cut(s) 611, 1234
BstPAI GACNNNNGTC 1 cut(s) 1140
BstSCI CCNGG 8 cut(s) 122, 207, 330, 354, 489, 538, 732, 1498
BstSFI CTRYAG 1 cut(s) 250
BstUI CGCG 2 cut(s) 197, 1062
BstV1I GCAGC 3 cut(s) 409, 615, 1198
BstV2I GAAGAC 1 cut(s) 605
BstX2I RGATCY 3 cut(s) 358, 815, 957
BstYI RGATCY 3 cut(s) 358, 815, 957
BsuRI GGCC 7 cut(s) 138, 212, 374, 697, 1065, 1090, 1504
BtgI CCRYGG 5 cut(s) 158, 368, 716, 1060, 1296
BtsCI GGATG 2 cut(s) 698, 898
BtsI GCAGTG 1 cut(s) 944
BtsIMutI CAGTG 2 cut(s) 233, 944
Cac8I GCNNGC 2 cut(s) 136, 244
CaiI CAGNNNCTG 2 cut(s) 361, 1316
CfoI GCGC 2 cut(s) 199, 871
Cfr10I RCCGGY 1 cut(s) 134
Cfr13I GGNCC 4 cut(s) 210, 372, 1089, 1502
Cfr42I CCGCGG 1 cut(s) 1063
CseI GACGC 3 cut(s) 163, 203, 869
Csp6I GTAC 3 cut(s) 469, 535, 1252
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviQI GTAC 3 cut(s) 469, 535, 1252
DdeI CTNAG 6 cut(s) 117, 390, 723, 933, 1158, 1164
DpnI GATC 5 cut(s) 31, 360, 817, 959, 1215
DpnII GATC 5 cut(s) 29, 358, 815, 957, 1213
EaeI YGGCCR 2 cut(s) 136, 695
Eam1104I CTCTTC 5 cut(s) 84, 173, 279, 825, 1174
EarI CTCTTC 5 cut(s) 84, 173, 279, 825, 1174
Eco130I CCWWGG 3 cut(s) 259, 1074, 1296
Eco32I GATATC 2 cut(s) 441, 664
Eco57I CTGAAG 2 cut(s) 987, 1039
EcoNI CCTNNNNNAGG 1 cut(s) 1157
EcoRII CCWGG 5 cut(s) 122, 354, 538, 732, 1498
EcoRV GATATC 2 cut(s) 441, 664
EcoT14I CCWWGG 3 cut(s) 259, 1074, 1296
ErhI CCWWGG 3 cut(s) 259, 1074, 1296
FaqI GGGAC 1 cut(s) 1265
FauI CCCGC 1 cut(s) 1393
Fnu4HI GCNGC 7 cut(s) 247, 423, 626, 629, 1060, 1063, 1187
FokI GGATG 2 cut(s) 705, 905
Fsp4HI GCNGC 7 cut(s) 247, 423, 626, 629, 1060, 1063, 1187
FspBI CTAG 3 cut(s) 146, 588, 1154
GlaI GCGC 2 cut(s) 198, 870
GluI GCNGC 7 cut(s) 247, 423, 626, 629, 1060, 1063, 1187
GsaI CCCAGC 1 cut(s) 207
GsuI CTGGAG 3 cut(s) 209, 383, 1388
HaeIII GGCC 7 cut(s) 138, 212, 374, 697, 1065, 1090, 1504
HapII CCGG 6 cut(s) 135, 208, 332, 343, 490, 634
HgaI GACGC 3 cut(s) 163, 203, 869
HhaI GCGC 2 cut(s) 199, 871
Hin1I GRCGYC 1 cut(s) 155
Hin6I GCGC 2 cut(s) 197, 869
HinP1I GCGC 2 cut(s) 197, 869
HincII GTYRAC 2 cut(s) 1081, 1135
HindII GTYRAC 2 cut(s) 1081, 1135
HinfI GANTC 7 cut(s) 6, 349, 851, 1218, 1313, 1337, 1480
HpaI GTTAAC 1 cut(s) 1081
HpaII CCGG 6 cut(s) 135, 208, 332, 343, 490, 634
HphI GGTGA 4 cut(s) 112, 344, 448, 1237
Hpy166II GTNNAC 6 cut(s) 103, 463, 501, 720, 1081, 1135
Hpy188I TCNGA 5 cut(s) 15, 120, 431, 925, 1464
Hpy8I GTNNAC 6 cut(s) 103, 463, 501, 720, 1081, 1135
Hpy99I CGWCG 3 cut(s) 157, 197, 297
HpyAV CCTTC 4 cut(s) 193, 769, 962, 1125
HpyCH4III ACNGT 3 cut(s) 130, 845, 1468
HpyCH4IV ACGT 3 cut(s) 295, 860, 1288
HpyCH4V TGCA 9 cut(s) 484, 520, 576, 642, 942, 1106, 1264, 1310, 1398
HpyF10VI GCNNNNNNNGC 2 cut(s) 625, 877
HpyF3I CTNAG 6 cut(s) 117, 390, 723, 933, 1158, 1164
HpySE526I ACGT 3 cut(s) 295, 860, 1288
Hsp92I GRCGYC 1 cut(s) 155
HspAI GCGC 2 cut(s) 197, 869
KpnI GGTACC 1 cut(s) 538
KroI GCCGGC 1 cut(s) 134
KroNI GCCGGC 1 cut(s) 136
KspAI GTTAAC 1 cut(s) 1081
KspI CCGCGG 1 cut(s) 1063
Kzo9I GATC 5 cut(s) 29, 358, 815, 957, 1213
LguI GCTCTTC 1 cut(s) 279
LmnI GCTCC 6 cut(s) 204, 225, 236, 364, 636, 778
Lsp1109I GCAGC 3 cut(s) 409, 615, 1198
LweI GCATC 2 cut(s) 298, 513
MaeI CTAG 3 cut(s) 146, 588, 1154
MaeII ACGT 3 cut(s) 295, 860, 1288
MaeIII GTNAC 2 cut(s) 38, 834
MalI GATC 5 cut(s) 31, 360, 817, 959, 1215
MbiI CCGCTC 1 cut(s) 26
MboI GATC 5 cut(s) 29, 358, 815, 957, 1213
MflI RGATCY 3 cut(s) 358, 815, 957
MhlI GDGCHC 1 cut(s) 233
MlsI TGGCCA 1 cut(s) 697
MluNI TGGCCA 1 cut(s) 697
MlyI GAGTC 2 cut(s) 1227, 1331
MmeI TCCRAC 1 cut(s) 793
Mox20I TGGCCA 1 cut(s) 697
MroNI GCCGGC 1 cut(s) 134
MroXI GAANNNNTTC 1 cut(s) 107
MscI TGGCCA 1 cut(s) 697
MseI TTAA 3 cut(s) 528, 594, 1080
MslI CAYNNNNRTG 1 cut(s) 825
Msp20I TGGCCA 1 cut(s) 697
MspA1I CMGCKG 2 cut(s) 628, 1062
MspCI CTTAAG 1 cut(s) 527
MspI CCGG 6 cut(s) 135, 208, 332, 343, 490, 634
MspR9I CCNGG 8 cut(s) 124, 209, 332, 356, 491, 540, 734, 1500
MvaI CCWGG 5 cut(s) 124, 356, 540, 734, 1500
MvnI CGCG 2 cut(s) 197, 1062
MwoI GCNNNNNNNGC 2 cut(s) 625, 877
NaeI GCCGGC 1 cut(s) 136
NciI CCSGG 3 cut(s) 209, 332, 491
NcoI CCATGG 1 cut(s) 1296
NdeII GATC 5 cut(s) 29, 358, 815, 957, 1213
NgoMIV GCCGGC 1 cut(s) 134
NlaIV GGNNCC 5 cut(s) 164, 366, 536, 549, 817
NmeAIII GCCGAG 1 cut(s) 60
NspI RCATGY 2 cut(s) 611, 1234
PasI CCCWGGG 1 cut(s) 539
PciI ACATGT 1 cut(s) 1230
PciSI GCTCTTC 1 cut(s) 279
PdiI GCCGGC 1 cut(s) 136
PdmI GAANNNNTTC 1 cut(s) 107
PfeI GAWTC 5 cut(s) 6, 349, 851, 1313, 1480
PflMI CCANNNNNTGG 2 cut(s) 361, 812
PkrI GCNGC 7 cut(s) 248, 424, 627, 630, 1061, 1064, 1188
Ple19I CGATCG 1 cut(s) 32
PleI GAGTC 2 cut(s) 1226, 1331
PpsI GAGTC 2 cut(s) 1226, 1331
Ppu21I YACGTR 1 cut(s) 1289
PscI ACATGT 1 cut(s) 1230
PshAI GACNNNNGTC 1 cut(s) 1140
Psp6I CCWGG 5 cut(s) 122, 354, 538, 732, 1498
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 5 cut(s) 122, 354, 538, 732, 1498
PspN4I GGNNCC 5 cut(s) 164, 366, 536, 549, 817
PspPI GGNCC 4 cut(s) 210, 372, 1089, 1502
PstNI CAGNNNCTG 2 cut(s) 361, 1316
PsuI RGATCY 3 cut(s) 358, 815, 957
PvuI CGATCG 1 cut(s) 32
RsaI GTAC 3 cut(s) 470, 536, 1253
RsaNI GTAC 3 cut(s) 469, 535, 1252
RseI CAYNNNNRTG 1 cut(s) 825
SacII CCGCGG 1 cut(s) 1063
SapI GCTCTTC 1 cut(s) 279
SaqAI TTAA 3 cut(s) 528, 594, 1080
SatI GCNGC 7 cut(s) 247, 423, 626, 629, 1060, 1063, 1187
Sau3AI GATC 5 cut(s) 29, 358, 815, 957, 1213
Sau96I GGNCC 4 cut(s) 210, 372, 1089, 1502
ScaI AGTACT 1 cut(s) 1253
SchI GAGTC 2 cut(s) 1227, 1331
ScrFI CCNGG 8 cut(s) 124, 209, 332, 356, 491, 540, 734, 1500
SduI GDGCHC 1 cut(s) 233
SfaNI GCATC 2 cut(s) 298, 513
SfcI CTRYAG 1 cut(s) 250
Sfr303I CCGCGG 1 cut(s) 1063
SgrBI CCGCGG 1 cut(s) 1063
SmiMI CAYNNNNRTG 1 cut(s) 825
SmlI CTYRAG 2 cut(s) 444, 527
SmoI CTYRAG 2 cut(s) 444, 527
SsiI CCGC 7 cut(s) 24, 247, 626, 1011, 1060, 1062, 1386
SspMI CTAG 3 cut(s) 146, 588, 1154
StyD4I CCNGG 8 cut(s) 122, 207, 330, 354, 489, 538, 732, 1498
StyI CCWWGG 3 cut(s) 259, 1074, 1296
TaaI ACNGT 3 cut(s) 130, 845, 1468
TaiI ACGT 3 cut(s) 298, 863, 1291
TaqI TCGA 4 cut(s) 28, 292, 1216, 1340
TaqII GACCGA 1 cut(s) 617
TatI WGTACW 2 cut(s) 468, 1251
TauI GCSGC 4 cut(s) 249, 628, 1062, 1065
TfiI GAWTC 5 cut(s) 6, 349, 851, 1313, 1480
Tru1I TTAA 3 cut(s) 528, 594, 1080
Tru9I TTAA 3 cut(s) 528, 594, 1080
TscAI CASTG 2 cut(s) 233, 944
TseI GCWGC 3 cut(s) 422, 628, 1186
TspDTI ATGAA 3 cut(s) 76, 1226, 1493
TspGWI ACGGA 3 cut(s) 43, 287, 298
TspRI CASTG 2 cut(s) 233, 944
Van91I CCANNNNNTGG 2 cut(s) 361, 812
Vha464I CTTAAG 1 cut(s) 527
XagI CCTNNNNNAGG 1 cut(s) 1157
XceI RCATGY 2 cut(s) 611, 1234
XcmI CCANNNNNNNNNTGG 1 cut(s) 675
XmnI GAANNNNTTC 1 cut(s) 107
XspI CTAG 3 cut(s) 146, 588, 1154
ZrmI AGTACT 1 cut(s) 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.