RchiOBHm_Chr4g0384741

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0008400
Physical Location & Seq
Reverse (-)
76168 .. 78806
2639 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1977 bp
ATGATGGAAGTGGAACAAGGAGGAGGAAGAGAGCGAATATTCGTTGGGGGTTTGGGAGAGAGCGTGACGGAAGACGATCTGCAAAGGCTGTTCACCGGAGTTGGAGGAAGCGTCGACGGAATCGATATAATCAGAACCAAAGGCCGTAGCTTTGCTTACGTCGACTTTCTGCCTTGCTCAGACAAGTCCCTCTCCAAGCTCTTCGCCACGTATAATGGGTGCGTTTGGAAGGGCGGGAAGCTGAAACTCCACAAGGCTAAAGAACATTATCTTGTTCGTTTGAGACGAGAATGGGCTGAACTAGAAAATGCTCAACTTGCTGCTGAAATTAAGCACCACACCACCCAAGAAGCTAAAACTGCTTCACAACACAGCACCAAGCAGCTTCGCTTATTCTTTCCTGCTCTAAGAACCGTGAAAGCTTTGCCCTTTAGTGGAACTGGCAAGCACAAATACAGTTTCCAACGTGTTCAAGTTCCTTCTCTCCCCCTTCATTTCTGTGACTGTGAAGAGCATGCTGTTTTTGACCCTTCTCCTGATCAACAAAACCAATTACCTGACCATGTGATCAATGACAAAGAGCTTAGTATAATGAATAAAGTAATGGACAAGCTCTTACAAAAGGAATTGGAACATGTTTCTGATGATGCTGATCACAATACTACCGCCTCCCCTCTGCCTCGGCCTCTGCCTAGTCAACAACATGGTGAGCTTTATCTTCCTACTGAAGCGGAAGCTGAGCAAGACGACCTCATAATTAATATTGTGTCAAGTAAACATGAAGAAAACATACTATCGGCCTTGGAGGAATTGAGATCCAGTGGAACACAGGTGTGCAGTAAGATTAATGGACCTCCTAACAAAAAGAGGAAATCCCTTCTCAACAAGAGTTACAATGAAACAGAATTGGAGCCTGATATCCCTGGCTCAAAGACGGATTCTAAATCTCAACCAGATAAACCAGAGCTGGGAGTCCAACAATCAACTGCCCCGGTTTCATGGTCTCAGAAATGTTCATGGAGACAACTTGTCGGTCATAGGGACAACAGTGGGTTCAGTGTCTCACATATACTGACAGGCAGATCTTCTTCTAGTGACCAAATGGAGCCCAAATCTGGCAGTTCCGATGTGCACCAGTCTGAGGACCTGGCAAGTGACGGAAACTCAGAAGGCCAGCTGTCTGAGATGGAACCACTTAAGGGAAGATCAGAACATAAACCTACCAAGTCAGTATCTGACTCATATGAGTCGGGTAGAGTTCCTTCATGGCGTCAGGAATTATCTCTGACACAATTGACTGATGAGAATACTGGGAGTGTAACTGAACAGGCCCAGCCAAACTCTGGTTCTGGTGCTTTTGAAGTGTCCCATTCTGACAGCAAAAACCAGGACTTGGCAAGGGATGGAAACTTGGAAGGTCAGCTCTGTGAGATGGAACCGGTGGAGGAGAATGCGGATCCTCAACCTCAAAATGCATTATCAAACTCAACTAAGTCAGGTAGAGGAGCTTCATGGCGCCAGAAATCGTCCTGGACACAATTGATTAATGACAATACTGGAAGCTCATTCAGCATAACACAAGTTCTACCAGCTGGTATCTCTTTCAAGCAACAAGGGTTCCAAAAGCCCAGAGGTGTAGAAGTCATGAGCTCTTTTGGCAGCAAGCTCAAGGAAACAGTAAAGCAAGATAAGAATAAACTTACTAGAGGTGAATCCTCTTCTTTGGGGATAATTGGAAAGGAGGGGGATGGTTTACCACGGAGTACTCCTAAAGAGAATCAACAGATTATTGCCGGCAATGACAATGCTCCAGATCTGGGGAAAATATGTGATTTGACACCAAAGCAAGCATCTACAGGCACTGTTGACAAAGGTAAAACCTGCTTATTTGTGAGAAGTGCTGCTTCATTAAATGAATGGGCGAAAGCTAAGGCTGCCCTAAGTGGGTCACGAAAAAGAAAGAACAGCAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

658

Amino Acids

72.22

Weight (kDa)

6.35

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 13 - 56 6.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1889
AccB1I GGYRCC 1 cut(s) 1515
AccB7I CCANNNNNTGG 2 cut(s) 1343, 1393
AccI GTMKAC 2 cut(s) 114, 162
AciI CCGC 4 cut(s) 234, 666, 731, 1454
AclWI GGATC 3 cut(s) 810, 1451, 1464
AcuI CTGAAG 1 cut(s) 747
AcyI GRCGYC 2 cut(s) 1270, 1516
AfaI GTAC 1 cut(s) 1765
AfiI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
AflII CTTAAG 1 cut(s) 1196
AflIII ACRYGT 2 cut(s) 466, 634
AgeI ACCGGT 1 cut(s) 1438
AgsI TTSAA 3 cut(s) 473, 1361, 1606
AhdI GACNNNNNGTC 1 cut(s) 1028
AjnI CCWGG 4 cut(s) 922, 1146, 1386, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 1330, 1362
AleI CACNNNNGTG 1 cut(s) 832
Alw21I GWGCWC 2 cut(s) 1134, 1652
Alw26I GTCTC 4 cut(s) 277, 1008, 1015, 1066
Alw44I GTGCAC 1 cut(s) 1130
AlwI GGATC 3 cut(s) 810, 1451, 1464
AlwNI CAGNNNCTG 2 cut(s) 1235, 1862
AoxI GGCC 5 cut(s) 142, 683, 798, 1171, 1329
ApaLI GTGCAC 1 cut(s) 1130
ApeKI GCWGC 5 cut(s) 320, 382, 1659, 1901, 1934
AseI ATTAAT 3 cut(s) 759, 846, 1545
AsiGI ACCGGT 1 cut(s) 1438
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 3 cut(s) 851, 1144, 1330
AsuC2I CCSGG 1 cut(s) 992
AsuHPI GGTGA 3 cut(s) 85, 719, 1721
AvaII GGWCC 2 cut(s) 851, 1144
BaeGI GKGCMC 1 cut(s) 1134
BamHI GGATCC 1 cut(s) 1456
BanI GGYRCC 1 cut(s) 1515
BanII GRGCYC 2 cut(s) 1110, 1652
BarI GAAGNNNNNNTAC 6 cut(s) 774, 806, 1246, 1278, 1492, 1524
BbsI GAAGAC 1 cut(s) 78
Bbv12I GWGCWC 2 cut(s) 1134, 1652
BbvI GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BccI CCATC 4 cut(s) 1180, 1397, 1426, 1742
BceAI ACGGC 1 cut(s) 129
BciT130I CCWGG 4 cut(s) 924, 1148, 1388, 1531
BclI TGATCA 3 cut(s) 538, 567, 652
BcnI CCSGG 1 cut(s) 992
BcoDI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BfaI CTAG 4 cut(s) 302, 693, 1092, 1704
BfmI CTRYAG 1 cut(s) 1854
BfoI RGCGCY 1 cut(s) 1519
BfrI CTTAAG 1 cut(s) 1196
BfuAI ACCTGC 1 cut(s) 1889
BglII AGATCT 2 cut(s) 1082, 1813
BisI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
BlpI GCTNAGC 1 cut(s) 738
BlsI GCNGC 5 cut(s) 322, 384, 1661, 1903, 1936
BmcAI AGTACT 1 cut(s) 1765
Bme1390I CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
Bme18I GGWCC 2 cut(s) 851, 1144
BmeRI GACNNNNNGTC 1 cut(s) 1028
BmgT120I GGNCC 3 cut(s) 851, 1144, 1330
BmiI GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
BmrFI CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
BmrI ACTGGG 1 cut(s) 1320
BmsI GCATC 2 cut(s) 637, 1859
BmuI ACTGGG 1 cut(s) 1320
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 1794
Bpu10I CCTNAGC 1 cut(s) 1929
Bpu1102I GCTNAGC 1 cut(s) 738
BpuEI CTTGAG 1 cut(s) 1652
BpuMI CCSGG 1 cut(s) 992
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 210
BsaBI GATNNNNATC 1 cut(s) 651
BsaHI GRCGYC 2 cut(s) 1270, 1516
BsaI GGTCTC 1 cut(s) 1008
BsaJI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BsaWI WCCGGW 2 cut(s) 95, 1438
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 96, 126
Bsc4I CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
Bse118I RCCGGY 2 cut(s) 1438, 1793
Bse1I ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
Bse3DI GCAATG 1 cut(s) 1804
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 4 cut(s) 924, 1148, 1388, 1531
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BseGI GGATG 2 cut(s) 1408, 1753
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
BseMI GCAATG 1 cut(s) 1804
BseMII CTCAG 6 cut(s) 192, 729, 1019, 1131, 1173, 1179
BseNI ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
BseRI GAGGAG 3 cut(s) 36, 1460, 1518
BseSI GKGCMC 1 cut(s) 1134
BseXI GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BseYI CCCAGC 2 cut(s) 967, 1332
BsgI GTGCAG 1 cut(s) 856
BshFI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BshNI GGYRCC 1 cut(s) 1515
BshTI ACCGGT 1 cut(s) 1438
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 2 cut(s) 1134, 1652
BsiSI CCGG 4 cut(s) 96, 992, 1439, 1794
BslFI GGGAC 3 cut(s) 172, 1055, 1351
BslI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
BsmAI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 3 cut(s) 172, 1055, 1351
BsmI GAATGC 1 cut(s) 1456
BsnI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
Bso31I GGTCTC 1 cut(s) 1008
Bsp1286I GDGCHC 3 cut(s) 1110, 1134, 1652
Bsp143I GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
Bsp1720I GCTNAGC 1 cut(s) 738
BspACI CCGC 4 cut(s) 234, 666, 731, 1454
BspANI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BspCNI CTCAG 6 cut(s) 191, 730, 1018, 1132, 1174, 1178
BspDI ATCGAT 1 cut(s) 123
BspHI TCATGA 1 cut(s) 1644
BspLI GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
BspMI ACCTGC 1 cut(s) 1889
BspPI GGATC 3 cut(s) 810, 1451, 1464
BspQI GCTCTTC 2 cut(s) 206, 504
BspT107I GGYRCC 1 cut(s) 1515
BspTI CTTAAG 1 cut(s) 1196
BspTNI GGTCTC 1 cut(s) 1008
BsrDI GCAATG 1 cut(s) 1804
BsrFI RCCGGY 2 cut(s) 1438, 1793
BsrI ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
BssAI RCCGGY 2 cut(s) 1438, 1793
BssECI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BssMI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
BssNI GRCGYC 2 cut(s) 1270, 1516
BssT1I CCWWGG 1 cut(s) 801
Bst2UI CCWGG 4 cut(s) 924, 1148, 1388, 1531
Bst4CI ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
Bst6I CTCTTC 4 cut(s) 22, 206, 504, 1723
BstACI GRCGYC 2 cut(s) 1270, 1516
BstAFI CTTAAG 1 cut(s) 1196
BstBAI YACGTR 1 cut(s) 210
BstC8I GCNNGC 6 cut(s) 446, 516, 1175, 1664, 1795, 1848
BstDSI CCRYGG 1 cut(s) 1757
BstF5I GGATG 2 cut(s) 1408, 1753
BstH2I RGCGCY 1 cut(s) 1519
BstHHI GCGC 1 cut(s) 1518
BstKTI GATC 9 cut(s) 79, 541, 570, 655, 818, 1085, 1208, 1459, 1816
BstMAI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BstMBI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
BstMWI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
BstNI CCWGG 4 cut(s) 924, 1148, 1388, 1531
BstNSI RCATGY 2 cut(s) 518, 638
BstSCI CCNGG 5 cut(s) 922, 990, 1146, 1386, 1529
BstSFI CTRYAG 1 cut(s) 1854
BstSLI GKGCMC 1 cut(s) 1134
BstV1I GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 4 cut(s) 815, 1082, 1456, 1813
BstYI RGATCY 4 cut(s) 815, 1082, 1456, 1813
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 1 cut(s) 1757
BtsCI GGATG 2 cut(s) 1408, 1753
BtsIMutI CAGTG 4 cut(s) 826, 1054, 1063, 1860
BveI ACCTGC 1 cut(s) 1889
Cac8I GCNNGC 6 cut(s) 446, 516, 1175, 1664, 1795, 1848
CaiI CAGNNNCTG 2 cut(s) 1235, 1862
CciI TCATGA 1 cut(s) 1644
CfoI GCGC 1 cut(s) 1518
Cfr10I RCCGGY 2 cut(s) 1438, 1793
Cfr13I GGNCC 3 cut(s) 851, 1144, 1330
ClaI ATCGAT 1 cut(s) 123
CseI GACGC 2 cut(s) 100, 1259
Csp6I GTAC 1 cut(s) 1764
CspAI ACCGGT 1 cut(s) 1438
CviQI GTAC 1 cut(s) 1764
DinI GGCGCC 1 cut(s) 1517
DpnI GATC 9 cut(s) 78, 540, 569, 654, 817, 1084, 1207, 1458, 1815
DpnII GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
DriI GACNNNNNGTC 1 cut(s) 1028
Eam1104I CTCTTC 4 cut(s) 22, 206, 504, 1723
Eam1105I GACNNNNNGTC 1 cut(s) 1028
EarI CTCTTC 4 cut(s) 22, 206, 504, 1723
Ecl136II GAGCTC 1 cut(s) 1650
Eco130I CCWWGG 1 cut(s) 801
Eco24I GRGCYC 2 cut(s) 1110, 1652
Eco31I GGTCTC 1 cut(s) 1008
Eco32I GATATC 1 cut(s) 919
Eco47I GGWCC 2 cut(s) 851, 1144
Eco53kI GAGCTC 1 cut(s) 1650
Eco57I CTGAAG 1 cut(s) 747
EcoICRI GAGCTC 1 cut(s) 1650
EcoO109I RGGNCCY 1 cut(s) 1144
EcoRII CCWGG 4 cut(s) 922, 1146, 1386, 1529
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 801
EcoT22I ATGCAT 1 cut(s) 1477
EcoT38I GRGCYC 2 cut(s) 1110, 1652
EgeI GGCGCC 1 cut(s) 1517
EheI GGCGCC 1 cut(s) 1517
ErhI CCWWGG 1 cut(s) 801
Esp3I CGTCTC 1 cut(s) 277
FalI AAGNNNNNCTT 2 cut(s) 1888, 1920
FaqI GGGAC 3 cut(s) 172, 1055, 1351
FauI CCCGC 1 cut(s) 227
FauNDI CATATG 1 cut(s) 1243
FbaI TGATCA 3 cut(s) 538, 567, 652
FblI GTMKAC 2 cut(s) 114, 162
Fnu4HI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
FokI GGATG 2 cut(s) 1415, 1760
FriOI GRGCYC 2 cut(s) 1110, 1652
Fsp4HI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
FspBI CTAG 4 cut(s) 302, 693, 1092, 1704
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
GsaI CCCAGC 2 cut(s) 971, 1336
GsuI CTGGAG 1 cut(s) 1794
HaeII RGCGCY 1 cut(s) 1519
HaeIII GGCC 5 cut(s) 144, 685, 800, 1173, 1331
HapII CCGG 4 cut(s) 96, 992, 1439, 1794
HgaI GACGC 2 cut(s) 100, 1259
HhaI GCGC 1 cut(s) 1518
Hin1I GRCGYC 2 cut(s) 1270, 1516
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 4 cut(s) 115, 163, 698, 1867
HindII GTYRAC 4 cut(s) 115, 163, 698, 1867
HindIII AAGCTT 1 cut(s) 420
HinfI GANTC 7 cut(s) 120, 938, 972, 1238, 1247, 1712, 1777
HpaII CCGG 4 cut(s) 96, 992, 1439, 1794
HphI GGTGA 3 cut(s) 85, 719, 1721
Hpy166II GTNNAC 8 cut(s) 93, 115, 163, 698, 776, 1132, 1754, 1867
Hpy188III TCNNGA 5 cut(s) 536, 1274, 1645, 1811, 1950
Hpy8I GTNNAC 8 cut(s) 93, 115, 163, 698, 776, 1132, 1754, 1867
Hpy99I CGWCG 3 cut(s) 116, 119, 164
HpyAV CCTTC 8 cut(s) 223, 489, 500, 540, 887, 1163, 1272, 1409
HpyCH4III ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
HpyCH4IV ACGT 3 cut(s) 159, 209, 466
HpyCH4V TGCA 4 cut(s) 82, 837, 1132, 1475
HpyF10VI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
HpySE526I ACGT 3 cut(s) 159, 209, 466
Hsp92I GRCGYC 2 cut(s) 1270, 1516
HspAI GCGC 1 cut(s) 1516
KasI GGCGCC 1 cut(s) 1515
KroI GCCGGC 1 cut(s) 1793
KroNI GCCGGC 1 cut(s) 1795
Ksp22I TGATCA 3 cut(s) 538, 567, 652
Kzo9I GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
LguI GCTCTTC 2 cut(s) 206, 504
LmnI GCTCC 4 cut(s) 910, 1105, 1505, 1813
Lsp1109I GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
LweI GCATC 2 cut(s) 637, 1859
MaeI CTAG 4 cut(s) 302, 693, 1092, 1704
MaeII ACGT 3 cut(s) 159, 209, 466
MaeIII GTNAC 7 cut(s) 64, 500, 890, 1094, 1154, 1318, 1947
MalI GATC 9 cut(s) 78, 540, 569, 654, 817, 1084, 1207, 1458, 1815
MboI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
MfeI CAATTG 2 cut(s) 1292, 1538
MflI RGATCY 4 cut(s) 815, 1082, 1456, 1813
MhlI GDGCHC 3 cut(s) 1110, 1134, 1652
Mly113I GGCGCC 1 cut(s) 1516
MlyI GAGTC 3 cut(s) 981, 1232, 1256
MmeI TCCRAC 3 cut(s) 82, 487, 1000
Mph1103I ATGCAT 1 cut(s) 1477
MroNI GCCGGC 1 cut(s) 1793
MseI TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
MslI CAYNNNNRTG 2 cut(s) 498, 832
MspA1I CMGCKG 2 cut(s) 1177, 1592
MspCI CTTAAG 1 cut(s) 1196
MspI CCGG 4 cut(s) 96, 992, 1439, 1794
MspR9I CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
MunI CAATTG 2 cut(s) 1292, 1538
Mva1269I GAATGC 1 cut(s) 1456
MvaI CCWGG 4 cut(s) 924, 1148, 1388, 1531
MwoI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
NaeI GCCGGC 1 cut(s) 1795
NarI GGCGCC 1 cut(s) 1516
NciI CCSGG 1 cut(s) 992
NdeI CATATG 1 cut(s) 1243
NdeII GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
NgoMIV GCCGGC 1 cut(s) 1793
NlaIV GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
NsiI ATGCAT 1 cut(s) 1477
NspI RCATGY 2 cut(s) 518, 638
OliI CACNNNNGTG 1 cut(s) 832
PaeI GCATGC 1 cut(s) 518
PagI TCATGA 1 cut(s) 1644
PciI ACATGT 1 cut(s) 634
PciSI GCTCTTC 2 cut(s) 206, 504
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 283
PctI GAATGC 1 cut(s) 1456
PdiI GCCGGC 1 cut(s) 1795
PfeI GAWTC 4 cut(s) 120, 938, 1712, 1777
PflMI CCANNNNNTGG 2 cut(s) 1343, 1393
PfoI TCCNGGA 1 cut(s) 1529
PinAI ACCGGT 1 cut(s) 1438
PkrI GCNGC 5 cut(s) 322, 384, 1661, 1903, 1936
PleI GAGTC 3 cut(s) 980, 1232, 1255
PluTI GGCGCC 1 cut(s) 1519
PpsI GAGTC 3 cut(s) 980, 1232, 1255
Ppu21I YACGTR 1 cut(s) 210
PpuMI RGGWCCY 1 cut(s) 1144
PscI ACATGT 1 cut(s) 634
PshBI ATTAAT 3 cut(s) 759, 846, 1545
Psp124BI GAGCTC 1 cut(s) 1652
Psp5II RGGWCCY 1 cut(s) 1144
Psp6I CCWGG 4 cut(s) 922, 1146, 1386, 1529
PspFI CCCAGC 2 cut(s) 967, 1332
PspGI CCWGG 4 cut(s) 922, 1146, 1386, 1529
PspN4I GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
PspPI GGNCC 3 cut(s) 851, 1144, 1330
PspPPI RGGWCCY 1 cut(s) 1144
PstNI CAGNNNCTG 2 cut(s) 1235, 1862
PsuI RGATCY 4 cut(s) 815, 1082, 1456, 1813
PvuII CAGCTG 2 cut(s) 1177, 1592
RsaI GTAC 1 cut(s) 1765
RsaNI GTAC 1 cut(s) 1764
RseI CAYNNNNRTG 2 cut(s) 498, 832
SacI GAGCTC 1 cut(s) 1652
SalI GTCGAC 2 cut(s) 113, 161
SapI GCTCTTC 2 cut(s) 206, 504
SaqAI TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
SatI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
Sau3AI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
Sau96I GGNCC 3 cut(s) 851, 1144, 1330
ScaI AGTACT 1 cut(s) 1765
SchI GAGTC 3 cut(s) 981, 1232, 1256
ScrFI CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
SduI GDGCHC 3 cut(s) 1110, 1134, 1652
SfaNI GCATC 2 cut(s) 637, 1859
SfcI CTRYAG 1 cut(s) 1854
SfoI GGCGCC 1 cut(s) 1517
SgrDI CGTCGACG 1 cut(s) 113
SinI GGWCC 2 cut(s) 851, 1144
SmiMI CAYNNNNRTG 2 cut(s) 498, 832
SmlI CTYRAG 2 cut(s) 1196, 1667
SmoI CTYRAG 2 cut(s) 1196, 1667
SphI GCATGC 1 cut(s) 518
SsiI CCGC 4 cut(s) 234, 666, 731, 1454
SspDI GGCGCC 1 cut(s) 1515
SspI AATATT 2 cut(s) 39, 763
SspMI CTAG 4 cut(s) 302, 693, 1092, 1704
SstI GAGCTC 1 cut(s) 1652
StyD4I CCNGG 5 cut(s) 922, 990, 1146, 1386, 1529
StyI CCWWGG 1 cut(s) 801
TaaI ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
TaiI ACGT 3 cut(s) 162, 212, 469
TaqI TCGA 3 cut(s) 114, 123, 162
TaqII GACCGA 1 cut(s) 1022
TatI WGTACW 1 cut(s) 1763
TfiI GAWTC 4 cut(s) 120, 938, 1712, 1777
Tru1I TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
Tru9I TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
TscAI CASTG 4 cut(s) 826, 1054, 1063, 1867
TseFI GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
TseI GCWGC 5 cut(s) 320, 382, 1659, 1901, 1934
Tsp45I GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
TspGWI ACGGA 5 cut(s) 83, 132, 950, 1173, 1774
TspRI CASTG 4 cut(s) 826, 1054, 1063, 1867
Van91I CCANNNNNTGG 2 cut(s) 1343, 1393
Vha464I CTTAAG 1 cut(s) 1196
VneI GTGCAC 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 851, 1144
VspI ATTAAT 3 cut(s) 759, 846, 1545
XceI RCATGY 2 cut(s) 518, 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1340
XmiI GTMKAC 2 cut(s) 114, 162
XspI CTAG 4 cut(s) 302, 693, 1092, 1704
ZrmI AGTACT 1 cut(s) 1765
Zsp2I ATGCAT 1 cut(s) 1477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.