RchiOBHm_Chr3g0463911

Defective in exine formation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0010407
Physical Location & Seq
Reverse (-)
11211786 .. 11216285
4500 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2169 bp
ATGAAATCCGACGGGATTCGGGTGGTTTTTCTGATCTGTTTAATTCTTTGCGACGGCTCGAAATTCGTTCGCGGCGCCGATGGGCCGGCCAAGAATAAATTCCGGGAACGCGAGGCCAGCGATGACTCCCTTGGCTATCCAAACATAGATGAGGATGCGTTGTTGAATACACAGTGCCCTGCGAAATTGGAGCTCAGATGGCAAACGGAAGTTAGTTCTAGTATCTATGCTACGCCATTGATCTCCGATATTAATAGTGATGGAAAGCTTGAGATTGTGGTGCCATCTTTTGTTCACTATCTTGAAGTTTTGGAAGGTTCCGACGGAGACAAACTCCCCGGTTGGCCTGCTTTTCATCAGTCAACTGTACATGCAAGTCCTCTCCTGTATGATATCGATAAGGATGGCGTGAGAGAGATAGCTCTAGCAACCTACAATGGTGAAGTTCTCTTTTTCAGGGTCTCAGGCTACATGATGGTAGATAAACTAGTAGTACCTCGTAGGAAAGTTAAAAAGAATTGGTTTGGGGGTTTGCATCCAGATCCCGTTGATCGTACCCATCCAGATGTTCATGATGACCTTCTTGTCATGCAGGCCACTAATATGAATTCAAATCCTCAAACAGAGGAAAATACAACTAAAATAAACAATTCTGCTACTGTTGCAACAGAAAGCCATCCTGGTGTTAATACTTCAACTTCTGTTTCCAATGATGGCCATCCTGAGTTAGATACTAATACTACTGTTTCAAAAGAAAGTGATCCCGGCTTAAGTACTCCAGCTAAAAACGAAAGCCACCTTAGCATGGTCAAGGCATCAAATCCAGAGGTTGAGAAGAAAGCAAATTTAAGTCCGGTAGAAACAGACATCAAGCAATCTACAAGCACAGAGAAGTCTTCTGTCAACAATGTGCCAGTGGAAACTCTGAATGCCGAGAAGGGGACTAGTTCGGTTAGACGGCTTTTGGAGGACAACAATTCTAGCAAATCACAGGATGGTGGTTCTGAATCCAAAGATAATAATGAGGACATTCCTGTTGCAACTGCAGAAAATGATGGTGTTCTCGAAGAGGATGCTGATTCATCTTTTGAGTTACTCCGTGACAATGATGAACTGGCCGACGAGTATAACTATGACTATGATGATTATGTTGATGAAGAAATGTGGGGAGATGAGGAGTGGACTGAAGTGCAACATGAGAAAATAGAAGATTATGTCAATGTTGACGCACACATCTTGTGCACTCCTGTCATAGCGGACATTGATAATGATGGAATATCAGAAATGGTTGTTGCCGTTTCTTACTTTTTTGATCATGAGTACTATGACAACCCAGAGCATATGAAGGAATTGGGTGGCATTGATATAGGAAAATATGTAGCTGGTTCCATTGTTGTGTTCAACCTTGACACTAAACAAGTAAAGTGGACTGCTGATCTAGATTTGAGTACAGAGACTGGAACATTCCGTGCTTACATATATTCCTCTCCGACTGTCGTTGATTTGGATGGTGATGGGAACCTGGACATTCTTGTCGGAACTTCATATGGCTTGTTCTATGTGTTAGATCATCATGGCAAGGTGAGGGAAAAGTTCCCTCTTGAAATGGCTGAAATTCAAGGAGCTGTTGTTGCAGCTGATATTAATGATGATGGAAAAATTGAACTAGTGACTACTGATGCTCATGGAAATGTTGCTGCATGGACTGCTCAAGGAGTAGAAATTTGGGAAACGCATCTTAAGAGTCTAGTTCCCCAGGGTCCCACCATCGGTGATGTTGATGGGGATGGCCGTACTGATGTTGTGGTTCCAACACTATCAGGGAACATATACGTTCTTAGTGGCAAAGATGGGTTGATTGTTCGTCCTTATCCATATAGAACTCATGGGAGGGTTATGAGTCAAGTTCTTCTAGTGGATTTAAGTAAAAAAGGAGAGAAAAAGAAAGGACTCACTCTTGCTACAACATCATTTGATGGATATTTGTACCTTATTGATGGACCAACAGCATGTGCAGATGTTGTTGATATTGGTGAAACTTCATATAGCATGGTCTTAGCAGATAATGTTGACGGTGGAGACGATCTTGATCTTATTGTTACAACCATGAATGGCAATGTTTATTGCTTCTCAACTCCAGCTTCACATCATCCCCTTAAGGCAGGATAG

Protein Analysis

722

Amino Acids

79.08

Weight (kDa)

4.44

Isoelectric Point (pI)

31.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FG-GAP_3 PF13517 547 - 603 8.5e-07 FG-GAP-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010407)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09090 AT3G09090 AT3G09090
fragaria_vesca FvH4_6g12060
malus_domestica MD04G1146700.v1.1 MD12G1159900.v1.1
prunus_persica Prupe.6G270500_v2.0.a1
pyrus_communis pycom04g13250 pycom12g15180
rosa_chinensis RchiOBHm_Chr3g0463901 RchiOBHm_Chr3g0463911
rosa_laevigata RLG00000024737 RLG00000024746
rosa_multiflora Rmu_sc0000517.1_g000002
rosa_roxburghii Rroxscaffold_6G00416150
rosa_rugosa Rorug03G0069100
rosa_samantha Rh3AG126100 Rh3BG130100 Rh3CG132600 Rh3DG131300
rosa_wichuraiana Rw3G010640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 584, 1532
AccB1I GGYRCC 2 cut(s) 74, 280
AccII CGCG 2 cut(s) 72, 111
AciI CCGC 2 cut(s) 72, 1256
AclWI GGATC 2 cut(s) 536, 755
AcoI YGGCCR 4 cut(s) 87, 715, 1116, 1789
AcsI RAATTY 6 cut(s) 62, 98, 607, 844, 1614, 1722
AcuI CTGAAG 1 cut(s) 1206
AcyI GRCGYC 1 cut(s) 75
AfaI GTAC 8 cut(s) 369, 495, 556, 775, 1322, 1450, 1795, 1988
AfiI CCNNNNNNNGG 3 cut(s) 805, 939, 1769
AflII CTTAAG 3 cut(s) 769, 1739, 2156
AgsI TTSAA 9 cut(s) 166, 305, 612, 696, 750, 1402, 1604, 1619, 1664
AhlI ACTAGT 3 cut(s) 487, 944, 1666
AjnI CCWGG 3 cut(s) 679, 1521, 1755
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AluBI AGCT 8 cut(s) 193, 268, 422, 782, 1382, 1625, 1637, 2141
AluI AGCT 8 cut(s) 193, 268, 422, 782, 1382, 1625, 1637, 2141
Alw21I GWGCWC 2 cut(s) 195, 1244
Alw26I GTCTC 4 cut(s) 321, 466, 1448, 2073
Alw44I GTGCAC 1 cut(s) 1240
AlwI GGATC 2 cut(s) 536, 755
AlwNI CAGNNNCTG 1 cut(s) 1457
AoxI GGCC 8 cut(s) 83, 87, 114, 344, 594, 715, 1116, 1789
ApaLI GTGCAC 1 cut(s) 1240
ApeKI GCWGC 2 cut(s) 1634, 1697
ApoI RAATTY 6 cut(s) 62, 98, 607, 844, 1614, 1722
AseI ATTAAT 2 cut(s) 252, 1644
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 1 cut(s) 77
AspS9I GGNCC 3 cut(s) 83, 1760, 2000
AsuC2I CCSGG 3 cut(s) 104, 339, 765
AsuHPI GGTGA 5 cut(s) 452, 1523, 1594, 1784, 2045
AvaII GGWCC 2 cut(s) 1760, 2000
BaeGI GKGCMC 2 cut(s) 179, 1244
BalI TGGCCA 1 cut(s) 717
BanI GGYRCC 2 cut(s) 74, 280
BanII GRGCYC 1 cut(s) 195
BbsI GAAGAC 1 cut(s) 888
Bbv12I GWGCWC 2 cut(s) 195, 1244
BbvI GCAGC 2 cut(s) 1646, 1684
BceAI ACGGC 4 cut(s) 70, 974, 1280, 1776
BcgI CGANNNNNNTGC 2 cut(s) 1055, 1089
BciT130I CCWGG 3 cut(s) 681, 1523, 1757
BclI TGATCA 1 cut(s) 1312
BcnI CCSGG 3 cut(s) 104, 339, 765
BcoDI GTCTC 4 cut(s) 321, 466, 1448, 2073
BcuI ACTAGT 3 cut(s) 487, 944, 1666
BfaI CTAG 9 cut(s) 219, 425, 488, 945, 981, 1439, 1667, 1748, 1913
BfmI CTRYAG 1 cut(s) 1044
BfoI RGCGCY 1 cut(s) 78
BfrI CTTAAG 3 cut(s) 769, 1739, 2156
BisI GCNGC 3 cut(s) 73, 1635, 1698
BlsI GCNGC 3 cut(s) 74, 1636, 1699
BmcAI AGTACT 2 cut(s) 775, 1322
Bme1390I CCNGG 6 cut(s) 104, 339, 681, 765, 1523, 1757
Bme18I GGWCC 2 cut(s) 1760, 2000
BmgT120I GGNCC 3 cut(s) 83, 1760, 2000
BmiI GGNNCC 8 cut(s) 76, 282, 319, 1387, 1520, 1761, 1762, 1809
BmrFI CCNGG 6 cut(s) 104, 339, 681, 765, 1523, 1757
BmsI GCATC 6 cut(s) 145, 544, 824, 1063, 1669, 1744
BpiI GAAGAC 1 cut(s) 888
BplI GAGNNNNNCTC 2 cut(s) 318, 350
BpmI CTGGAG 2 cut(s) 762, 2121
Bpu10I CCTNAGC 1 cut(s) 800
BpuEI CTTGAG 2 cut(s) 290, 1695
BpuMI CCSGG 3 cut(s) 104, 339, 765
Bsa29I ATCGAT 1 cut(s) 396
BsaBI GATNNNNATC 2 cut(s) 717, 2088
BsaHI GRCGYC 1 cut(s) 75
BsaI GGTCTC 1 cut(s) 466
BsaJI CCNNGG 4 cut(s) 130, 337, 1755, 1756
BsaWI WCCGGW 1 cut(s) 853
BsaXI ACNNNNNCTCC 2 cut(s) 1614, 1644
Bsc4I CCNNNNNNNGG 3 cut(s) 805, 939, 1769
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 3 cut(s) 914, 1119, 1462
Bse3DI GCAATG 1 cut(s) 2122
Bse8I GATNNNNATC 2 cut(s) 717, 2088
BseBI CCWGG 3 cut(s) 681, 1523, 1757
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 4 cut(s) 130, 337, 1755, 1756
BseJI GATNNNNATC 2 cut(s) 717, 2088
BseLI CCNNNNNNNGG 3 cut(s) 805, 939, 1769
BseMI GCAATG 1 cut(s) 2122
BseMII CTCAG 3 cut(s) 208, 477, 714
BseNI ACTGG 3 cut(s) 914, 1119, 1462
BseRI GAGGAG 1 cut(s) 1190
BseSI GKGCMC 2 cut(s) 179, 1244
BseXI GCAGC 2 cut(s) 1646, 1684
BsgI GTGCAG 1 cut(s) 2034
Bsh1236I CGCG 2 cut(s) 72, 111
BshFI GGCC 8 cut(s) 85, 89, 116, 346, 596, 717, 1118, 1791
BshNI GGYRCC 2 cut(s) 74, 280
BshVI ATCGAT 1 cut(s) 396
BsiHKAI GWGCWC 2 cut(s) 195, 1244
BsiSI CCGG 5 cut(s) 86, 103, 339, 765, 854
BslFI GGGAC 2 cut(s) 955, 1746
BslI CCNNNNNNNGG 3 cut(s) 805, 939, 1769
BsmAI GTCTC 4 cut(s) 321, 466, 1448, 2073
BsmBI CGTCTC 1 cut(s) 2073
BsmFI GGGAC 2 cut(s) 955, 1746
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 8 cut(s) 85, 89, 116, 346, 596, 717, 1118, 1791
Bso31I GGTCTC 1 cut(s) 466
Bsp1286I GDGCHC 3 cut(s) 179, 195, 1244
Bsp1407I TGTACA 1 cut(s) 367
BspACI CCGC 2 cut(s) 72, 1256
BspANI GGCC 8 cut(s) 85, 89, 116, 346, 596, 717, 1118, 1791
BspCNI CTCAG 3 cut(s) 207, 476, 715
BspDI ATCGAT 1 cut(s) 396
BspFNI CGCG 2 cut(s) 72, 111
BspHI TCATGA 2 cut(s) 571, 1315
BspLI GGNNCC 8 cut(s) 76, 282, 319, 1387, 1520, 1761, 1762, 1809
BspMAI CTGCAG 1 cut(s) 1048
BspPI GGATC 2 cut(s) 536, 755
BspT107I GGYRCC 2 cut(s) 74, 280
BspTI CTTAAG 3 cut(s) 769, 1739, 2156
BspTNI GGTCTC 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 2122
BsrFI RCCGGY 1 cut(s) 85
BsrGI TGTACA 1 cut(s) 367
BsrI ACTGG 3 cut(s) 914, 1119, 1462
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 4 cut(s) 130, 337, 1755, 1756
BssNI GRCGYC 1 cut(s) 75
BssT1I CCWWGG 1 cut(s) 130
Bst2UI CCWGG 3 cut(s) 681, 1523, 1757
Bst4CI ACNGT 6 cut(s) 174, 367, 661, 745, 1495, 2075
Bst6I CTCTTC 1 cut(s) 1062
BstACI GRCGYC 1 cut(s) 75
BstAFI CTTAAG 3 cut(s) 769, 1739, 2156
BstAPI GCANNNNNTGC 1 cut(s) 1706
BstAUI TGTACA 1 cut(s) 367
BstC8I GCNNGC 4 cut(s) 87, 118, 348, 594
BstDEI CTNAG 6 cut(s) 194, 463, 723, 800, 1838, 2056
BstFNI CGCG 2 cut(s) 72, 111
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 1 cut(s) 77
BstMAI GTCTC 4 cut(s) 321, 466, 1448, 2073
BstMWI GCNNNNNNNGC 6 cut(s) 117, 199, 662, 801, 1631, 1706
BstNI CCWGG 3 cut(s) 681, 1523, 1757
BstNSI RCATGY 2 cut(s) 374, 2013
BstSCI CCNGG 6 cut(s) 102, 337, 679, 763, 1521, 1755
BstSFI CTRYAG 1 cut(s) 1044
BstSLI GKGCMC 2 cut(s) 179, 1244
BstUI CGCG 2 cut(s) 72, 111
BstV1I GCAGC 2 cut(s) 1646, 1684
BstV2I GAAGAC 1 cut(s) 888
BstX2I RGATCY 1 cut(s) 541
BstYI RGATCY 1 cut(s) 541
Bsu15I ATCGAT 1 cut(s) 396
BsuRI GGCC 8 cut(s) 85, 89, 116, 346, 596, 717, 1118, 1791
BsuTUI ATCGAT 1 cut(s) 396
BtgZI GCGATG 1 cut(s) 135
BtsIMutI CAGTG 2 cut(s) 179, 921
Cac8I GCNNGC 4 cut(s) 87, 118, 348, 594
CaiI CAGNNNCTG 1 cut(s) 1457
CciI TCATGA 2 cut(s) 571, 1315
CfoI GCGC 1 cut(s) 77
Cfr10I RCCGGY 1 cut(s) 85
Cfr13I GGNCC 3 cut(s) 83, 1760, 2000
ClaI ATCGAT 1 cut(s) 396
CseI GACGC 1 cut(s) 1235
Csp6I GTAC 8 cut(s) 368, 494, 555, 774, 1321, 1449, 1794, 1987
CspCI CAANNNNNGTGG 2 cut(s) 1406, 1441
CviQI GTAC 8 cut(s) 368, 494, 555, 774, 1321, 1449, 1794, 1987
DdeI CTNAG 6 cut(s) 194, 463, 723, 800, 1838, 2056
DinI GGCGCC 1 cut(s) 76
DrdI GACNNNNNNGTC 2 cut(s) 584, 1532
DseDI GACNNNNNNGTC 2 cut(s) 584, 1532
EaeI YGGCCR 4 cut(s) 87, 715, 1116, 1789
Eam1104I CTCTTC 1 cut(s) 1062
EarI CTCTTC 1 cut(s) 1062
Ecl136II GAGCTC 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 130
Eco24I GRGCYC 1 cut(s) 195
Eco31I GGTCTC 1 cut(s) 466
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 2 cut(s) 1760, 2000
Eco53kI GAGCTC 1 cut(s) 193
Eco57I CTGAAG 1 cut(s) 1206
EcoICRI GAGCTC 1 cut(s) 193
EcoO109I RGGNCCY 1 cut(s) 1760
EcoRI GAATTC 1 cut(s) 607
EcoRII CCWGG 3 cut(s) 679, 1521, 1755
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 1 cut(s) 130
EcoT38I GRGCYC 1 cut(s) 195
EgeI GGCGCC 1 cut(s) 76
EheI GGCGCC 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 130
Esp3I CGTCTC 1 cut(s) 2073
FaqI GGGAC 2 cut(s) 955, 1746
FauNDI CATATG 2 cut(s) 1341, 1546
FbaI TGATCA 1 cut(s) 1312
Fnu4HI GCNGC 3 cut(s) 73, 1635, 1698
FriOI GRGCYC 1 cut(s) 195
FseI GGCCGGCC 1 cut(s) 89
Fsp4HI GCNGC 3 cut(s) 73, 1635, 1698
FspBI CTAG 9 cut(s) 219, 425, 488, 945, 981, 1439, 1667, 1748, 1913
GlaI GCGC 1 cut(s) 76
GluI GCNGC 3 cut(s) 73, 1635, 1698
GsuI CTGGAG 2 cut(s) 762, 2121
HaeII RGCGCY 1 cut(s) 78
HaeIII GGCC 8 cut(s) 85, 89, 116, 346, 596, 717, 1118, 1791
HapII CCGG 5 cut(s) 86, 103, 339, 765, 854
HgaI GACGC 1 cut(s) 1235
HhaI GCGC 1 cut(s) 77
Hin1I GRCGYC 1 cut(s) 75
Hin6I GCGC 1 cut(s) 75
HinP1I GCGC 1 cut(s) 75
HincII GTYRAC 4 cut(s) 363, 904, 1225, 2071
HindII GTYRAC 4 cut(s) 363, 904, 1225, 2071
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 7 cut(s) 16, 125, 1007, 1079, 1744, 1900, 1950
HpaII CCGG 5 cut(s) 86, 103, 339, 765, 854
HphI GGTGA 5 cut(s) 452, 1523, 1594, 1784, 2045
Hpy166II GTNNAC 8 cut(s) 295, 363, 904, 1182, 1225, 1242, 1428, 2071
Hpy8I GTNNAC 8 cut(s) 295, 363, 904, 1182, 1225, 1242, 1428, 2071
Hpy99I CGWCG 4 cut(s) 14, 56, 326, 1124
HpyAV CCTTC 4 cut(s) 308, 590, 931, 1339
HpyCH4III ACNGT 6 cut(s) 174, 367, 661, 745, 1495, 2075
HpyCH4IV ACGT 1 cut(s) 1833
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 199, 662, 801, 1631, 1706
HpyF3I CTNAG 6 cut(s) 194, 463, 723, 800, 1838, 2056
HpySE526I ACGT 1 cut(s) 1833
Hsp92I GRCGYC 1 cut(s) 75
HspAI GCGC 1 cut(s) 75
KasI GGCGCC 1 cut(s) 74
KflI GGGWCCC 1 cut(s) 1760
KroI GCCGGC 1 cut(s) 85
KroNI GCCGGC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 1312
LmnI GCTCC 2 cut(s) 190, 1622
Lsp1109I GCAGC 2 cut(s) 1646, 1684
LweI GCATC 6 cut(s) 145, 544, 824, 1063, 1669, 1744
MaeI CTAG 9 cut(s) 219, 425, 488, 945, 981, 1439, 1667, 1748, 1913
MaeII ACGT 1 cut(s) 1833
MaeIII GTNAC 4 cut(s) 1092, 1100, 1669, 2098
MboII GAAGA 6 cut(s) 847, 888, 1079, 1169, 1220, 1901
MflI RGATCY 1 cut(s) 541
MhlI GDGCHC 3 cut(s) 179, 195, 1244
MlsI TGGCCA 1 cut(s) 717
MluNI TGGCCA 1 cut(s) 717
Mly113I GGCGCC 1 cut(s) 75
MlyI GAGTC 4 cut(s) 119, 1753, 1909, 1944
MmeI TCCRAC 5 cut(s) 33, 345, 1514, 1516, 1835
Mox20I TGGCCA 1 cut(s) 717
MroNI GCCGGC 1 cut(s) 85
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 717
MslI CAYNNNNRTG 5 cut(s) 564, 602, 681, 1394, 1689
Msp20I TGGCCA 1 cut(s) 717
MspA1I CMGCKG 1 cut(s) 1637
MspCI CTTAAG 3 cut(s) 769, 1739, 2156
MspI CCGG 5 cut(s) 86, 103, 339, 765, 854
MspR9I CCNGG 6 cut(s) 104, 339, 681, 765, 1523, 1757
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 3 cut(s) 681, 1523, 1757
MvnI CGCG 2 cut(s) 72, 111
MwoI GCNNNNNNNGC 6 cut(s) 117, 199, 662, 801, 1631, 1706
NaeI GCCGGC 1 cut(s) 87
NarI GGCGCC 1 cut(s) 75
NciI CCSGG 3 cut(s) 104, 339, 765
NdeI CATATG 2 cut(s) 1341, 1546
NgoMIV GCCGGC 1 cut(s) 85
NlaIV GGNNCC 8 cut(s) 76, 282, 319, 1387, 1520, 1761, 1762, 1809
NmeAIII GCCGAG 1 cut(s) 958
NmuCI GTSAC 2 cut(s) 1100, 1669
NspI RCATGY 2 cut(s) 374, 2013
PagI TCATGA 2 cut(s) 571, 1315
PasI CCCWGGG 1 cut(s) 1756
PcsI WCGNNNNNNNCGW 1 cut(s) 2079
PctI GAATGC 1 cut(s) 934
PdiI GCCGGC 1 cut(s) 87
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 3 cut(s) 16, 1007, 1079
PfoI TCCNGGA 1 cut(s) 102
PkrI GCNGC 3 cut(s) 74, 1636, 1699
PleI GAGTC 4 cut(s) 119, 1752, 1908, 1944
PluTI GGCGCC 1 cut(s) 78
PpsI GAGTC 4 cut(s) 119, 1752, 1908, 1944
PpuMI RGGWCCY 1 cut(s) 1760
PshBI ATTAAT 2 cut(s) 252, 1644
Psp124BI GAGCTC 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 1760
Psp6I CCWGG 3 cut(s) 679, 1521, 1755
PspGI CCWGG 3 cut(s) 679, 1521, 1755
PspN4I GGNNCC 8 cut(s) 76, 282, 319, 1387, 1520, 1761, 1762, 1809
PspPI GGNCC 3 cut(s) 83, 1760, 2000
PspPPI RGGWCCY 1 cut(s) 1760
PstI CTGCAG 1 cut(s) 1048
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 1 cut(s) 541
PvuII CAGCTG 1 cut(s) 1637
RigI GGCCGGCC 1 cut(s) 89
RsaI GTAC 8 cut(s) 369, 495, 556, 775, 1322, 1450, 1795, 1988
RsaNI GTAC 8 cut(s) 368, 494, 555, 774, 1321, 1449, 1794, 1987
RseI CAYNNNNRTG 5 cut(s) 564, 602, 681, 1394, 1689
SacI GAGCTC 1 cut(s) 195
SatI GCNGC 3 cut(s) 73, 1635, 1698
Sau96I GGNCC 3 cut(s) 83, 1760, 2000
ScaI AGTACT 2 cut(s) 775, 1322
SchI GAGTC 4 cut(s) 119, 1753, 1909, 1944
ScrFI CCNGG 6 cut(s) 104, 339, 681, 765, 1523, 1757
SduI GDGCHC 3 cut(s) 179, 195, 1244
SfaNI GCATC 6 cut(s) 145, 544, 824, 1063, 1669, 1744
SfcI CTRYAG 1 cut(s) 1044
SfoI GGCGCC 1 cut(s) 76
SinI GGWCC 2 cut(s) 1760, 2000
SmiMI CAYNNNNRTG 5 cut(s) 564, 602, 681, 1394, 1689
SmlI CTYRAG 5 cut(s) 269, 769, 1710, 1739, 2156
SmoI CTYRAG 5 cut(s) 269, 769, 1710, 1739, 2156
SpeI ACTAGT 3 cut(s) 487, 944, 1666
SsiI CCGC 2 cut(s) 72, 1256
SspDI GGCGCC 1 cut(s) 74
SspMI CTAG 9 cut(s) 219, 425, 488, 945, 981, 1439, 1667, 1748, 1913
SstI GAGCTC 1 cut(s) 195
StyD4I CCNGG 6 cut(s) 102, 337, 679, 763, 1521, 1755
StyI CCWWGG 1 cut(s) 130
TaaI ACNGT 6 cut(s) 174, 367, 661, 745, 1495, 2075
TaiI ACGT 1 cut(s) 1836
TaqI TCGA 3 cut(s) 59, 396, 1065
TatI WGTACW 4 cut(s) 367, 773, 1320, 1448
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 3 cut(s) 16, 1007, 1079
TscAI CASTG 2 cut(s) 179, 921
TseFI GTSAC 2 cut(s) 1100, 1669
TseI GCWGC 2 cut(s) 1634, 1697
Tsp45I GTSAC 2 cut(s) 1100, 1669
TspGWI ACGGA 4 cut(s) 221, 339, 1088, 1457
TspRI CASTG 2 cut(s) 179, 921
Vha464I CTTAAG 3 cut(s) 769, 1739, 2156
VneI GTGCAC 1 cut(s) 1240
VpaK11BI GGWCC 2 cut(s) 1760, 2000
VspI ATTAAT 2 cut(s) 252, 1644
XapI RAATTY 6 cut(s) 62, 98, 607, 844, 1614, 1722
XbaI TCTAGA 1 cut(s) 1438
XceI RCATGY 2 cut(s) 374, 2013
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 9 cut(s) 219, 425, 488, 945, 981, 1439, 1667, 1748, 1913
ZrmI AGTACT 2 cut(s) 775, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.