Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012094

Physical Location & Seq

Genomic Coordinates Reverse (-)

14778697 .. 14783564

Gene Structure 4868 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGCGGAAGGCGCTTCATTTTTGTTCGGCGGCATTCACTTCAACCGGAGAAAGTTCGCCACTGACTTTTCCCGATTCGAGGCCAAAAAGAAAGAGATAAACGCTTCGAGCCTTGCACAACCTGAACCAGAAGAAGAGGAGGAGGAGGAGGAAGAGCCAGTAGTTGCAGTTTCTGTGAAGAAGAGGAAGAGGAAGACGGAGGGTTCAGAGTCTGGGGATGGAATCAGTCTTTATAAGACGTCAAAATCAGCAAAGGCAGCTAAGAAAGATAAAGAGAAGCCTGTGAATGAACGCGCCAAGCAGAAGAAGAAATTAAATAGACAACTTGAGCGGGATTCGATAATTCGAAAGAAGTATAATGTGCATGTGTCGGGGAATAATATCCCATCCCCTCTTGAGAATTTTTCGGAGTTAAGCTCAAGATTTGGATGTGAAGAGTATTTACTTCGTAATTTGGCCGAGCTTGGATTTGAAGAGCCAACACCAATCCAAAGGCAGGCTATTCCAGTCCTCTTATCTGGCCGGGAATGCTTTGCTTGTGCTCCAACTGGGTCTGGAAAAACCCTTGCTTTTGTGGTTCCCATGCTTATGAAACTTAAGCAAGCGTCTAAGGGTGGCATTCGAGCTGTGATTCTTTGTCCTACACGTGAATTAGCTGCTCAGACAACCAGAGAGTGCAAAAAGTTGGCAAAAGGAAATAAATTTTACATTAAGTTGATGACTAAAGAGCTTGTTAGAAGTGCTGATTTTTCAAAAGACCCTTGTGATGTACTCATATCTACTCCACAACGGCTACGGATGGCTATTCGAAAAAAGAAGCTTAATTTAAGCAGGGTGGAATATCTTGTCTTGGATGAGTCTGATAAGCTCTTTGAGCTTGGCCTGTTAAAGCAGATTGATTCTGTGGTGAAAGCATGCTCAAACCCTTCAATAGTTCGCTCTTTGTTTAGTGCTACTTTACCTGATTTTGTTGAGGAGCTTGCACGTACTATAATGCATGATGCTGTTCGAGTTATCATTGGCAGGAAAAATACTGCTTCTGAGACTATTAAGCAAAAATTGGTATATGCTGGAAGTGAACAAGGGAAATTTCTAGCACTTCGACAGAGCTTTACAGAGAGTCTAAATCCACCAGTGTTGATCTTTGTACAAAGCAAAGAGCGAGCGAAGGAACTCTATGGAGAGCTGTTATGTGAGAACATAAGAGTTGGTGCGATCCATTCTGATATGTCGCAAGCAGAGCGAGAAAATGCTGTTGACGACTTCAGATCTGGAAAAACATGGGTTTTGATTGCCACTGATGTTATTGCCCGGGGTATGGATTTCAAAGGCATCAACTGTGTTATTAATTATGATTTTCCAGATTCTTCGGCTGCCTACATTCACCGGATTGGTCGTTGTGGAAGAGCGGGAAGGAGTGGAGAAGCTATTACGTTCTACACAGATGAAGATATTCCATTTTTGCGGAATATAGCTAATGTTATGGCATCATCAGGTTGTGAGGTTCCATCTTGGATCATGGTCTTGCCCAAAAAGAAGTGGAGAAAGCACAGACCTGGAAGAGGAGGATCGGTATTAGCCGGACCGAAAGATGAAGTAAAAAAGAAGTGGACAAAGAAGAAGGCAAAAAAAACCAAGACAAACATAGATGATGAACCAAAAGATGAGCAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

558

Amino Acids

62.66

Weight (kDa)

9.46

Isoelectric Point (pI)

49.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	161 - 326	5.6e-39	DEAD/DEAH box helicase
ResIII	PF04851	164 - 311	5.9e-10	Type III restriction enzyme, res subunit
Helicase_C	PF00271	363 - 471	2.2e-32	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09720 AT3G09720
fragaria_vesca	FvH4_6g15470
malus_domestica	MD04G1103000.v1.1 MD12G1123200.v1.1
prunus_persica	Prupe.6G240000_v2.0.a1 Prupe.6G240000_v2.0.a1
pyrus_communis	pycom04g09810 pycom12g12190
rosa_chinensis	RchiOBHm_Chr3g0468951
rosa_laevigata	RLG00000024397
rosa_multiflora	Rmu_co8069278.1_g000001 Rmu_co8291353.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412430
rosa_rugosa	Rorug03G0097800
rosa_samantha	Rh3AG147400 Rh3BG170000 Rh3DG205000
rosa_wichuraiana	Rw3G013880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	234
AatII	GACGTC	1 cut(s)	242
AccBSI	CCGCTC	2 cut(s)	331, 1409
AccII	CGCG	1 cut(s)	294
AciI	CCGC	5 cut(s)	5, 30, 331, 1409, 1465
AclWI	GGATC	3 cut(s)	1210, 1523, 1576
AcoI	YGGCCR	2 cut(s)	456, 520
AcsI	RAATTY	3 cut(s)	400, 701, 1088
AcuI	CTGAAG	1 cut(s)	1249
AcvI	CACGTG	1 cut(s)	647
AcyI	GRCGYC	1 cut(s)	239
AfaI	GTAC	3 cut(s)	771, 988, 1149
AfiI	CCNNNNNNNGG	4 cut(s)	79, 496, 1318, 1562
AflII	CTTAAG	1 cut(s)	596
AflIII	ACRYGT	1 cut(s)	644
AgsI	TTSAA	5 cut(s)	43, 473, 753, 930, 1327
AjnI	CCWGG	1 cut(s)	1555
Alw21I	GWGCWC	1 cut(s)	544
Alw26I	GTCTC	1 cut(s)	1037
AlwI	GGATC	3 cut(s)	1210, 1523, 1576
AlwNI	CAGNNNCTG	2 cut(s)	173, 212
Ama87I	CYCGRG	1 cut(s)	1311
AoxI	GGCC	4 cut(s)	81, 456, 520, 880
ApeKI	GCWGC	3 cut(s)	257, 656, 1373
ApoI	RAATTY	3 cut(s)	400, 701, 1088
AseI	ATTAAT	1 cut(s)	1347
Asp700I	GAANNNNTTC	1 cut(s)	1452
AspLEI	GCGC	2 cut(s)	14, 296
AspS9I	GGNCC	1 cut(s)	1583
AsuC2I	CCSGG	3 cut(s)	524, 1312, 1313
AsuHPI	GGTGA	2 cut(s)	919, 1376
AsuII	TTCGAA	2 cut(s)	346, 808
AvaI	CYCGRG	1 cut(s)	1311
AvaII	GGWCC	1 cut(s)	1583
BarI	GAAGNNNNNNTAC	2 cut(s)	426, 458
BbrPI	CACGTG	1 cut(s)	647
BbsI	GAAGAC	1 cut(s)	200
Bbv12I	GWGCWC	1 cut(s)	544
BbvI	GCAGC	3 cut(s)	269, 643, 1360
BccI	CCATC	4 cut(s)	212, 394, 793, 1516
BceAI	ACGGC	1 cut(s)	806
BciT130I	CCWGG	1 cut(s)	1557
BcnI	CCSGG	3 cut(s)	524, 1312, 1313
BcoDI	GTCTC	1 cut(s)	1037
BfaI	CTAG	1 cut(s)	1094
BfoI	RGCGCY	1 cut(s)	15
BfrI	CTTAAG	1 cut(s)	596
BglII	AGATCT	1 cut(s)	1268
BisI	GCNGC	4 cut(s)	31, 258, 657, 1374
BlsI	GCNGC	4 cut(s)	32, 259, 658, 1375
Bme1390I	CCNGG	4 cut(s)	524, 1312, 1313, 1557
Bme18I	GGWCC	1 cut(s)	1583
BmeT110I	CYCGRG	1 cut(s)	1311
BmgT120I	GGNCC	1 cut(s)	1583
BmiI	GGNNCC	2 cut(s)	579, 1506
BmrFI	CCNGG	4 cut(s)	524, 1312, 1313, 1557
BmrI	ACTGGG	1 cut(s)	558
BmsI	GCATC	3 cut(s)	991, 1341, 1496
BmuI	ACTGGG	1 cut(s)	558
BpiI	GAAGAC	1 cut(s)	200
BplI	GAGNNNNNCTC	2 cut(s)	401, 433
Bpu14I	TTCGAA	2 cut(s)	346, 808
BpuEI	CTTGAG	3 cut(s)	347, 403, 416
BpuMI	CCSGG	3 cut(s)	524, 1312, 1313
BsaAI	YACGTR	2 cut(s)	647, 986
BsaHI	GRCGYC	1 cut(s)	239
BsaJI	CCNNGG	2 cut(s)	1311, 1312
BsaWI	WCCGGW	2 cut(s)	45, 1386
BsaXI	ACNNNNNCTCC	2 cut(s)	1557, 1587
Bsc4I	CCNNNNNNNGG	4 cut(s)	79, 496, 1318, 1562
Bse1I	ACTGG	4 cut(s)	158, 506, 553, 1133
BseBI	CCWGG	1 cut(s)	1557
BseDI	CCNNGG	2 cut(s)	1311, 1312
BseGI	GGATG	5 cut(s)	223, 386, 434, 804, 859
BseLI	CCNNNNNNNGG	4 cut(s)	79, 496, 1318, 1562
BseMII	CTCAG	2 cut(s)	674, 1032
BseNI	ACTGG	4 cut(s)	158, 506, 553, 1133
BseRI	GAGGAG	6 cut(s)	152, 155, 158, 161, 989, 1578
BseXI	GCAGC	3 cut(s)	269, 643, 1360
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	4 cut(s)	83, 458, 522, 882
BsiHKAI	GWGCWC	1 cut(s)	544
BsiHKCI	CYCGRG	1 cut(s)	1311
BsiSI	CCGG	5 cut(s)	46, 523, 1312, 1387, 1581
BslI	CCNNNNNNNGG	4 cut(s)	79, 496, 1318, 1562
BsmAI	GTCTC	1 cut(s)	1037
BsmI	GAATGC	3 cut(s)	33, 533, 618
BsnI	GGCC	4 cut(s)	83, 458, 522, 882
BsoBI	CYCGRG	1 cut(s)	1311
Bsp119I	TTCGAA	2 cut(s)	346, 808
Bsp1286I	GDGCHC	1 cut(s)	544
Bsp1407I	TGTACA	1 cut(s)	1147
Bsp143I	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
BspACI	CCGC	5 cut(s)	5, 30, 331, 1409, 1465
BspANI	GGCC	4 cut(s)	83, 458, 522, 882
BspCNI	CTCAG	2 cut(s)	673, 1033
BspFNI	CGCG	1 cut(s)	294
BspLI	GGNNCC	2 cut(s)	579, 1506
BspPI	GGATC	3 cut(s)	1210, 1523, 1576
BspQI	GCTCTTC	3 cut(s)	147, 468, 1399
BspT104I	TTCGAA	2 cut(s)	346, 808
BspTI	CTTAAG	1 cut(s)	596
BsrBI	CCGCTC	2 cut(s)	331, 1409
BsrGI	TGTACA	1 cut(s)	1147
BsrI	ACTGG	4 cut(s)	158, 506, 553, 1133
BssECI	CCNNGG	2 cut(s)	1311, 1312
BssMI	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
BssNI	GRCGYC	1 cut(s)	239
Bst2UI	CCWGG	1 cut(s)	1557
Bst4CI	ACNGT	1 cut(s)	1340
Bst6I	CTCTTC	8 cut(s)	129, 147, 176, 182, 429, 468, 1399, 1555
BstACI	GRCGYC	1 cut(s)	239
BstAFI	CTTAAG	1 cut(s)	596
BstAUI	TGTACA	1 cut(s)	1147
BstBAI	YACGTR	2 cut(s)	647, 986
BstBI	TTCGAA	2 cut(s)	346, 808
BstC8I	GCNNGC	6 cut(s)	498, 603, 916, 981, 1164, 1236
BstDEI	CTNAG	4 cut(s)	261, 609, 660, 1041
BstENI	CCTNNNNNAGG	1 cut(s)	1560
BstF5I	GGATG	5 cut(s)	223, 386, 434, 804, 859
BstFNI	CGCG	1 cut(s)	294
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	2 cut(s)	14, 296
BstKTI	GATC	5 cut(s)	1143, 1218, 1271, 1518, 1571
BstMAI	GTCTC	1 cut(s)	1037
BstMBI	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 257, 528, 874, 1240
BstNI	CCWGG	1 cut(s)	1557
BstNSI	RCATGY	2 cut(s)	368, 918
BstSCI	CCNGG	4 cut(s)	522, 1310, 1311, 1555
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	3 cut(s)	269, 643, 1360
BstV2I	GAAGAC	1 cut(s)	200
BstX2I	RGATCY	1 cut(s)	1268
BstYI	RGATCY	1 cut(s)	1268
BsuRI	GGCC	4 cut(s)	83, 458, 522, 882
BtsCI	GGATG	5 cut(s)	223, 386, 434, 804, 859
BtsIMutI	CAGTG	3 cut(s)	60, 1140, 1296
Cac8I	GCNNGC	6 cut(s)	498, 603, 916, 981, 1164, 1236
CaiI	CAGNNNCTG	2 cut(s)	173, 212
CfoI	GCGC	2 cut(s)	14, 296
Cfr13I	GGNCC	1 cut(s)	1583
Cfr9I	CCCGGG	1 cut(s)	1311
CpoI	CGGWCCG	1 cut(s)	1583
CseI	GACGC	1 cut(s)	594
Csp6I	GTAC	3 cut(s)	770, 987, 1148
CspCI	CAANNNNNGTGG	2 cut(s)	1119, 1154
CspI	CGGWCCG	1 cut(s)	1583
CviAII	CATG	6 cut(s)	365, 583, 915, 998, 1281, 1519
CviQI	GTAC	3 cut(s)	770, 987, 1148
DdeI	CTNAG	4 cut(s)	261, 609, 660, 1041
DpnI	GATC	5 cut(s)	1142, 1217, 1270, 1517, 1570
DpnII	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
EaeI	YGGCCR	2 cut(s)	456, 520
Eam1104I	CTCTTC	8 cut(s)	129, 147, 176, 182, 429, 468, 1399, 1555
EarI	CTCTTC	8 cut(s)	129, 147, 176, 182, 429, 468, 1399, 1555
EciI	GGCGGA	1 cut(s)	20
Eco47I	GGWCC	1 cut(s)	1583
Eco57I	CTGAAG	1 cut(s)	1249
Eco72I	CACGTG	1 cut(s)	647
Eco88I	CYCGRG	1 cut(s)	1311
EcoNI	CCTNNNNNAGG	1 cut(s)	1560
EcoRII	CCWGG	1 cut(s)	1555
EcoT22I	ATGCAT	1 cut(s)	999
FaeI	CATG	6 cut(s)	368, 586, 918, 1001, 1284, 1522
FatI	CATG	6 cut(s)	364, 582, 914, 997, 1280, 1518
FauI	CCCGC	2 cut(s)	324, 1402
Fnu4HI	GCNGC	4 cut(s)	31, 258, 657, 1374
FokI	GGATG	5 cut(s)	230, 373, 441, 811, 866
Fsp4HI	GCNGC	4 cut(s)	31, 258, 657, 1374
FspBI	CTAG	1 cut(s)	1094
GlaI	GCGC	2 cut(s)	13, 295
GluI	GCNGC	4 cut(s)	31, 258, 657, 1374
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	4 cut(s)	83, 458, 522, 882
HapII	CCGG	5 cut(s)	46, 523, 1312, 1387, 1581
HgaI	GACGC	1 cut(s)	594
HhaI	GCGC	2 cut(s)	14, 296
Hin1I	GRCGYC	1 cut(s)	239
Hin1II	CATG	6 cut(s)	368, 586, 918, 1001, 1284, 1522
Hin6I	GCGC	2 cut(s)	12, 294
HinP1I	GCGC	2 cut(s)	12, 294
HincII	GTYRAC	1 cut(s)	1258
HindII	GTYRAC	1 cut(s)	1258
HindIII	AAGCTT	1 cut(s)	818
HinfI	GANTC	9 cut(s)	75, 209, 222, 335, 631, 857, 899, 1120, 1364
HpaII	CCGG	5 cut(s)	46, 523, 1312, 1387, 1581
HphI	GGTGA	2 cut(s)	919, 1376
Hpy166II	GTNNAC	3 cut(s)	1079, 1258, 1611
Hpy188I	TCNGA	7 cut(s)	208, 409, 663, 862, 1042, 1225, 1268
Hpy188III	TCNNGA	6 cut(s)	72, 395, 420, 555, 1272, 1361
Hpy8I	GTNNAC	3 cut(s)	1079, 1258, 1611
HpyAV	CCTTC	4 cut(s)	936, 1162, 1407, 1615
HpyCH4III	ACNGT	1 cut(s)	1340
HpyCH4IV	ACGT	4 cut(s)	239, 646, 985, 1433
HpyCH4V	TGCA	6 cut(s)	116, 167, 364, 678, 983, 997
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 257, 528, 874, 1240
HpyF3I	CTNAG	4 cut(s)	261, 609, 660, 1041
HpySE526I	ACGT	4 cut(s)	239, 646, 985, 1433
Hsp92I	GRCGYC	1 cut(s)	239
Hsp92II	CATG	6 cut(s)	368, 586, 918, 1001, 1284, 1522
HspAI	GCGC	2 cut(s)	12, 294
Kzo9I	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
LguI	GCTCTTC	3 cut(s)	147, 468, 1399
LmnI	GCTCC	2 cut(s)	547, 976
Lsp1109I	GCAGC	3 cut(s)	269, 643, 1360
LweI	GCATC	3 cut(s)	991, 1341, 1496
MaeI	CTAG	1 cut(s)	1094
MaeII	ACGT	4 cut(s)	239, 646, 985, 1433
MalI	GATC	5 cut(s)	1142, 1217, 1270, 1517, 1570
MbiI	CCGCTC	2 cut(s)	331, 1409
MboI	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
MflI	RGATCY	1 cut(s)	1268
MhlI	GDGCHC	1 cut(s)	544
MlyI	GAGTC	3 cut(s)	218, 866, 1129
MmeI	TCCRAC	1 cut(s)	569
Mph1103I	ATGCAT	1 cut(s)	999
MroXI	GAANNNNTTC	1 cut(s)	1452
MseI	TTAA	9 cut(s)	314, 413, 597, 711, 822, 827, 887, 1050, 1347
MslI	CAYNNNNRTG	1 cut(s)	587
MspCI	CTTAAG	1 cut(s)	596
MspI	CCGG	5 cut(s)	46, 523, 1312, 1387, 1581
MspR9I	CCNGG	4 cut(s)	524, 1312, 1313, 1557
Mva1269I	GAATGC	3 cut(s)	33, 533, 618
MvaI	CCWGG	1 cut(s)	1557
MvnI	CGCG	1 cut(s)	294
MwoI	GCNNNNNNNGC	5 cut(s)	11, 257, 528, 874, 1240
NciI	CCSGG	3 cut(s)	524, 1312, 1313
NdeII	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
NlaIII	CATG	6 cut(s)	368, 586, 918, 1001, 1284, 1522
NlaIV	GGNNCC	2 cut(s)	579, 1506
NmeAIII	GCCGAG	1 cut(s)	484
NsiI	ATGCAT	1 cut(s)	999
NspI	RCATGY	2 cut(s)	368, 918
NspV	TTCGAA	2 cut(s)	346, 808
PaeI	GCATGC	1 cut(s)	918
PciSI	GCTCTTC	3 cut(s)	147, 468, 1399
PctI	GAATGC	3 cut(s)	33, 533, 618
PdmI	GAANNNNTTC	1 cut(s)	1452
PfeI	GAWTC	6 cut(s)	75, 222, 335, 631, 899, 1364
PkrI	GCNGC	4 cut(s)	32, 259, 658, 1375
PleI	GAGTC	3 cut(s)	217, 865, 1128
PmaCI	CACGTG	1 cut(s)	647
PmlI	CACGTG	1 cut(s)	647
PpsI	GAGTC	3 cut(s)	217, 865, 1128
Ppu21I	YACGTR	2 cut(s)	647, 986
PshBI	ATTAAT	1 cut(s)	1347
PsiI	TTATAA	1 cut(s)	234
Psp6I	CCWGG	1 cut(s)	1555
PspCI	CACGTG	1 cut(s)	647
PspGI	CCWGG	1 cut(s)	1555
PspN4I	GGNNCC	2 cut(s)	579, 1506
PspPI	GGNCC	1 cut(s)	1583
PstNI	CAGNNNCTG	2 cut(s)	173, 212
PsuI	RGATCY	1 cut(s)	1268
RsaI	GTAC	3 cut(s)	771, 988, 1149
RsaNI	GTAC	3 cut(s)	770, 987, 1148
RseI	CAYNNNNRTG	1 cut(s)	587
Rsr2I	CGGWCCG	1 cut(s)	1583
RsrII	CGGWCCG	1 cut(s)	1583
SapI	GCTCTTC	3 cut(s)	147, 468, 1399
SaqAI	TTAA	9 cut(s)	314, 413, 597, 711, 822, 827, 887, 1050, 1347
SatI	GCNGC	4 cut(s)	31, 258, 657, 1374
Sau3AI	GATC	5 cut(s)	1140, 1215, 1268, 1515, 1568
Sau96I	GGNCC	1 cut(s)	1583
SchI	GAGTC	3 cut(s)	218, 866, 1129
ScrFI	CCNGG	4 cut(s)	524, 1312, 1313, 1557
SduI	GDGCHC	1 cut(s)	544
SfaNI	GCATC	3 cut(s)	991, 1341, 1496
SfuI	TTCGAA	2 cut(s)	346, 808
SinI	GGWCC	1 cut(s)	1583
SmaI	CCCGGG	1 cut(s)	1313
SmiMI	CAYNNNNRTG	1 cut(s)	587
SmlI	CTYRAG	4 cut(s)	326, 395, 418, 596
SmoI	CTYRAG	4 cut(s)	326, 395, 418, 596
SphI	GCATGC	1 cut(s)	918
SsiI	CCGC	5 cut(s)	5, 30, 331, 1409, 1465
SspMI	CTAG	1 cut(s)	1094
StyD4I	CCNGG	4 cut(s)	522, 1310, 1311, 1555
TaaI	ACNGT	1 cut(s)	1340
TaiI	ACGT	4 cut(s)	242, 649, 988, 1436
TaqI	TCGA	8 cut(s)	78, 107, 338, 346, 622, 808, 1009, 1102
TaqII	GACCGA	1 cut(s)	1600
TatI	WGTACW	2 cut(s)	769, 1147
TauI	GCSGC	1 cut(s)	33
TfiI	GAWTC	6 cut(s)	75, 222, 335, 631, 899, 1364
Tru1I	TTAA	9 cut(s)	314, 413, 597, 711, 822, 827, 887, 1050, 1347
Tru9I	TTAA	9 cut(s)	314, 413, 597, 711, 822, 827, 887, 1050, 1347
TscAI	CASTG	3 cut(s)	67, 1140, 1303
TseI	GCWGC	3 cut(s)	257, 656, 1373
TspDTI	ATGAA	6 cut(s)	6, 303, 605, 1461, 1608, 1668
TspGWI	ACGGA	2 cut(s)	212, 811
TspMI	CCCGGG	1 cut(s)	1311
TspRI	CASTG	3 cut(s)	67, 1140, 1303
Vha464I	CTTAAG	1 cut(s)	596
VpaK11BI	GGWCC	1 cut(s)	1583
VspI	ATTAAT	1 cut(s)	1347
XagI	CCTNNNNNAGG	1 cut(s)	1560
XapI	RAATTY	3 cut(s)	400, 701, 1088
XceI	RCATGY	2 cut(s)	368, 918
XmaI	CCCGGG	1 cut(s)	1311
XmnI	GAANNNNTTC	1 cut(s)	1452
XspI	CTAG	1 cut(s)	1094
ZraI	GACGTC	1 cut(s)	240
Zsp2I	ATGCAT	1 cut(s)	999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.