RchiOBHm_Chr2g0090061

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0007913
Physical Location & Seq
Forward (+)
4068481 .. 4072740
4260 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2538 bp
ATGCCTCAGGACGGTCTAAAATCAGCTTTGTACAGATCATTCATCACATGTGACGATCCTAAAGGAGTTGTGGATTGTGGGATGATAATGAGGAGATCCAAAAGCAGCGGTGGTTCACAGATTATGGATAAGCAGAAGAAGATCGAAGTCCAAAGAAATTCGAAGAACTCAATTAGTACATCACCATCTTCATTGGGGTTGATCTCCCAAGAGGAGTTTCAGAGCTCTTCATCATCTTCTTCTTTTCAGCTCATGGAAGTTTCTAGAGGAGCTCAGAGGCTGAACCACATGATTGGTTCCTGGTCGAATGAGAAGAAGAGATTTGATCATGGCCAGTCTAAAGACATTGCAAAAGATTTGCTAAAAGGAGCGCTTGATTTGCAGGAGAGTCTTGTTATGCTTGGGAAGTTGCAAGAAGCTTCACAGTACATGAGTAACTTGAACAAAAAGCACATGGGACAGCCGGAAAGAGCTTACTCAAATCGATATGGAGATCAAGGTTATGTGAAGCCAAGGCTTTCTTCTGATGGATACTCTTCAAGGAATAGTAATGAGGAGCTTAAGAAGGTGATCAGAGACAGCCTTGTGAGGCAAAAATTGTTCGAAAATACAAGCACTGCTGAGAAGGGTTGTGCTTATTCTCCTCAAAGATACAGGGATTCATATTCAGACAGTACTCCTTCCACAAGCTCAAGCCAGTCTTCTATGTATCATAATTCTAGTGAGTATTCCAGCATTGCATCACAAAAGGCGAAAGGTCCAAGTCTGATTGCCAAACTCATGGGAATAGAAGACTACCCTTTAAAATCTGTGCAGGAGGGTGAGAAGGTTTCAAAACAGCAGAGGCCTGCATTTGAAATTGATAGGCCAAAGGTGAGGAAGCCTCTGACTGCATCGCAAAGTGTTGATCCAGAAAAGAGGTCCTTAAGGGAAGTTCTTGACACGATGCGGTTTAAAGGGCTTCTGAGAAACAACTCTTTTGAAGAGCCCAAGTTTGAGATTCATCATTCCAATAAATTGGAATCGGAGAAAAGGTTCAATGGTGATAGTCCACCAATTGTGCTGATCAAGCCTATTTCTGTTGAATCCCCAGAAATGGAAGCAAATGCACCAATTGTTCGGGGAGAGGAAGCTTTCTACAACAGAAGGATGCTTAAGAAATTGAGATCAGAAGAAGAGGTTTCTCCGAAAACAGCGAGTGGTAAAGAGGGAGCTTTGAGGTCTGACAAAGTGCAGCAAAAACTTGTAGTAGAAGAGACATCAATTAGAAAGACTAGCAAAGAAGAAGGAGCTAAAAAGCATCGAGGGGCAGTGGACAAACATGGAGAAAAAGAAGCCAAGACGAAAGAAATGGCTTCGAGAAAGTTGAAAGCTTCTCAACCTGTAGTTCACAAGTCACAGAAGGAGGCAATTGACAAGAGGGTTGATAAGATCCAAAAGGTAGCTGCTGTTAACAGGAACTCAGCGGAGAAGGATAGAGTGATAGCTAAAACCGTGTCAAAGTCAAAGTCTCAAGATCAAGACATTGTGACATCTGCCAAGGCAAGAAAGCCTGAATCTGGATCAAACATCAAAAGGACTCCAGTTTCTCGACAACCAAGTACTGTGACAAGCACAAGTTCAAAACGTTCAACCGTACAGAATGCAGAGTGTAATTCCAGCGAACGCAGAAGGAATCATTTGAGGAAGGAAAAGCCAGTCAAGGAGCCTACAGGAGCTAAATCAGTTGCCAAAAATGTTGTGAGCGAAGAAATTGTCAGGAGAATTGATACCAGTGATAAAAGTGAGTCTTCTCTGATCAGCTCTGAAAATACGCCTATACTAACAAGCTCCAATACTGATTCTAGAGATCAACTCCTTAAAGAAGAGGAAAAGGAAACCTATGGATCCCAGAGTGAAGGGCACTGCAATAGTTTCCAAAGTTCTCTTTCTGAAGCTACATCACTGAGCTCCATGCAAGAAACAAACCCTGAAACTGCAGTAGAAGTTTCTGGAGACATCAGTCAGAGTGGAAAGGATGGCAAAACAGTCAGAAGTGGTGAAAATCTCAGAGAATTTCTTTTGAGTAATGCATCATTTCTGAGTCATGCCGAAGAGTATTTTGATCTTGATGTGAATGGCTCTACAATCTTACAAACATCTTCTGTCTCCAATTTCGGAGTGTCGAATTCAAGACTAGTTTTAAACTGTGCAAGTGAACTAGTCGAGTGCAAAATATTTCAAGCTTCACAAACAGTTGATCCTCTGTCACTAACATTCAAAGGCAAGTCAAAAGTTTCCATATCGTTGGACAAGTTGGTGGAAGATATTTGGAATGGGATCGAGAATCTGAGAAGTTACAGCAAGCTTGCTGGTGATAACCTTCTTGCAGATAGTCTGTATGCAATGTTGGAGAAAGATGTAATGTGCAAAGGAGTAGGAAAAGGAACATGGGATTTGGGTTGGAGAAATGGATTTTCCGGGGATGAAGGTGAGCAAGTAGTGAGTGACATAGAGAGACTGATTTTCAATGGACTGATTGAGGAGGTCTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

845

Amino Acids

93.84

Weight (kDa)

9.08

Isoelectric Point (pI)

55.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 720 - 842 5.8e-07 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 108, 949, 1466
AclI AACGTT 1 cut(s) 1627
AclWI GGATC 9 cut(s) 50, 90, 902, 1426, 1570, 1881, 1894, 2234, 2327
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 3 cut(s) 157, 2054, 2167
AcuI CTGAAG 1 cut(s) 1953
AfaI GTAC 6 cut(s) 32, 178, 428, 676, 1603, 1638
AfeI AGCGCT 1 cut(s) 372
AfiI CCNNNNNNNGG 3 cut(s) 11, 1096, 1559
AflII CTTAAG 3 cut(s) 560, 925, 1154
AflIII ACRYGT 1 cut(s) 47
AhlI ACTAGT 2 cut(s) 2176, 2200
AjnI CCWGG 1 cut(s) 299
AjuI GAANNNNNNNTTGG 4 cut(s) 201, 233, 505, 537
AloI GAACNNNNNNTCC 2 cut(s) 1019, 1051
Alw21I GWGCWC 3 cut(s) 227, 274, 1952
Alw26I GTCTC 6 cut(s) 570, 1250, 1515, 1989, 2152, 2491
AlwI GGATC 9 cut(s) 50, 90, 902, 1426, 1570, 1881, 1894, 2234, 2327
AlwNI CAGNNNCTG 1 cut(s) 280
Aor51HI AGCGCT 1 cut(s) 372
AoxI GGCC 3 cut(s) 331, 845, 866
ApeKI GCWGC 3 cut(s) 105, 1234, 1445
ApoI RAATTY 3 cut(s) 157, 2054, 2167
ArsI GACNNNNNNTTYG 4 cut(s) 1493, 1525, 1740, 1772
Asp700I GAANNNNTTC 1 cut(s) 1034
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 2 cut(s) 758, 921
AsuC2I CCSGG 1 cut(s) 2461
AsuHPI GGTGA 8 cut(s) 174, 580, 833, 886, 1055, 2051, 2366, 2483
AsuII TTCGAA 2 cut(s) 161, 603
AvaII GGWCC 2 cut(s) 758, 921
AxyI CCTNAGG 1 cut(s) 6
BaeGI GKGCMC 1 cut(s) 1905
BalI TGGCCA 1 cut(s) 333
BamHI GGATCC 1 cut(s) 1886
BanII GRGCYC 4 cut(s) 227, 274, 990, 1952
BbsI GAAGAC 3 cut(s) 693, 798, 1782
Bbv12I GWGCWC 3 cut(s) 227, 274, 1952
BbvI GCAGC 3 cut(s) 117, 1246, 1432
BccI CCATC 3 cut(s) 193, 521, 2012
BciT130I CCWGG 1 cut(s) 301
BciVI GTATCC 1 cut(s) 524
BclI TGATCA 4 cut(s) 325, 570, 1065, 1797
BcnI CCSGG 1 cut(s) 2461
BcoDI GTCTC 6 cut(s) 570, 1250, 1515, 1989, 2152, 2491
BcuI ACTAGT 2 cut(s) 2176, 2200
BfaI CTAG 6 cut(s) 264, 720, 1275, 1845, 2177, 2201
BfmI CTRYAG 3 cut(s) 1383, 1710, 1977
BfoI RGCGCY 1 cut(s) 374
BfrI CTTAAG 3 cut(s) 560, 925, 1154
BfuI GTATCC 1 cut(s) 524
BisI GCNGC 3 cut(s) 106, 1235, 1446
BlsI GCNGC 3 cut(s) 107, 1236, 1447
BmcAI AGTACT 2 cut(s) 676, 1603
Bme1390I CCNGG 2 cut(s) 301, 2461
Bme18I GGWCC 2 cut(s) 758, 921
BmgT120I GGNCC 2 cut(s) 758, 921
BmiI GGNNCC 3 cut(s) 298, 1707, 1888
BmrFI CCNGG 2 cut(s) 301, 2461
BmsI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2081
BoxI GACNNNNGTC 1 cut(s) 2001
BpiI GAAGAC 3 cut(s) 693, 798, 1782
BplI GAGNNNNNCTC 4 cut(s) 868, 900, 1839, 1871
BpmI CTGGAG 2 cut(s) 1566, 2013
Bpu14I TTCGAA 2 cut(s) 161, 603
BpuEI CTTGAG 2 cut(s) 676, 1497
BpuMI CCSGG 1 cut(s) 2461
Bsa29I ATCGAT 1 cut(s) 484
BsaJI CCNNGG 3 cut(s) 512, 1539, 2460
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 3 cut(s) 11, 1096, 1559
Bse1I ACTGG 5 cut(s) 334, 697, 1583, 1697, 1773
Bse21I CCTNAGG 1 cut(s) 6
Bse3DI GCAATG 3 cut(s) 345, 735, 2391
BseBI CCWGG 1 cut(s) 301
BseCI ATCGAT 1 cut(s) 484
BseDI CCNNGG 3 cut(s) 512, 1539, 2460
BseGI GGATG 4 cut(s) 87, 1155, 2023, 2470
BseLI CCNNNNNNNGG 3 cut(s) 11, 1096, 1559
BseMI GCAATG 3 cut(s) 345, 735, 2391
BseMII CTCAG 9 cut(s) 20, 287, 612, 956, 1476, 1937, 2062, 2072, 2321
BseNI ACTGG 5 cut(s) 334, 697, 1583, 1697, 1773
BseRI GAGGAG 6 cut(s) 106, 227, 282, 569, 633, 2537
BseSI GKGCMC 1 cut(s) 1905
BseXI GCAGC 3 cut(s) 117, 1246, 1432
BsgI GTGCAG 2 cut(s) 833, 1253
BshFI GGCC 3 cut(s) 333, 847, 868
BshVI ATCGAT 1 cut(s) 484
BsiHKAI GWGCWC 3 cut(s) 227, 274, 1952
BsiSI CCGG 2 cut(s) 464, 2460
BslFI GGGAC 1 cut(s) 471
BslI CCNNNNNNNGG 3 cut(s) 11, 1096, 1559
BsmAI GTCTC 6 cut(s) 570, 1250, 1515, 1989, 2152, 2491
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 1 cut(s) 1648
BsnI GGCC 3 cut(s) 333, 847, 868
Bsp119I TTCGAA 2 cut(s) 161, 603
Bsp1286I GDGCHC 5 cut(s) 227, 274, 990, 1905, 1952
Bsp1407I TGTACA 1 cut(s) 30
BspACI CCGC 3 cut(s) 108, 949, 1466
BspANI GGCC 3 cut(s) 333, 847, 868
BspCNI CTCAG 9 cut(s) 19, 286, 613, 957, 1475, 1938, 2061, 2073, 2322
BspDI ATCGAT 1 cut(s) 484
BspLI GGNNCC 3 cut(s) 298, 1707, 1888
BspMAI CTGCAG 1 cut(s) 1981
BspPI GGATC 9 cut(s) 50, 90, 902, 1426, 1570, 1881, 1894, 2234, 2327
BspQI GCTCTTC 2 cut(s) 232, 978
BspT104I TTCGAA 2 cut(s) 161, 603
BspTI CTTAAG 3 cut(s) 560, 925, 1154
BsrDI GCAATG 3 cut(s) 345, 735, 2391
BsrGI TGTACA 1 cut(s) 30
BsrI ACTGG 5 cut(s) 334, 697, 1583, 1697, 1773
BssECI CCNNGG 3 cut(s) 512, 1539, 2460
BssT1I CCWWGG 2 cut(s) 512, 1539
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 9 cut(s) 14, 426, 674, 1495, 1606, 1636, 2029, 2189, 2236
Bst6I CTCTTC 8 cut(s) 232, 311, 541, 978, 1170, 1248, 1860, 2088
BstAFI CTTAAG 3 cut(s) 560, 925, 1154
BstAUI TGTACA 1 cut(s) 30
BstBI TTCGAA 2 cut(s) 161, 603
BstC8I GCNNGC 3 cut(s) 849, 2345, 2349
BstDEI CTNAG 9 cut(s) 6, 273, 621, 965, 1462, 1946, 2048, 2081, 2330
BstF5I GGATG 4 cut(s) 87, 1155, 2023, 2470
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 1 cut(s) 373
BstMAI GTCTC 6 cut(s) 570, 1250, 1515, 1989, 2152, 2491
BstMWI GCNNNNNNNGC 2 cut(s) 379, 1069
BstNI CCWGG 1 cut(s) 301
BstNSI RCATGY 1 cut(s) 51
BstPAI GACNNNNGTC 1 cut(s) 2001
BstSCI CCNGG 2 cut(s) 299, 2459
BstSFI CTRYAG 3 cut(s) 1383, 1710, 1977
BstSLI GKGCMC 1 cut(s) 1905
BstV1I GCAGC 3 cut(s) 117, 1246, 1432
BstV2I GAAGAC 3 cut(s) 693, 798, 1782
BstX2I RGATCY 3 cut(s) 95, 1431, 1886
BstXI CCANNNNNNTGG 4 cut(s) 293, 781, 1018, 2287
BstYI RGATCY 3 cut(s) 95, 1431, 1886
Bsu15I ATCGAT 1 cut(s) 484
Bsu36I CCTNAGG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 524
BsuRI GGCC 3 cut(s) 333, 847, 868
BsuTUI ATCGAT 1 cut(s) 484
BtgZI GCGATG 1 cut(s) 879
BtsCI GGATG 4 cut(s) 87, 1155, 2023, 2470
BtsI GCAGTG 3 cut(s) 615, 1317, 1903
BtsIMutI CAGTG 5 cut(s) 615, 1317, 1780, 1903, 1943
Cac8I GCNNGC 3 cut(s) 849, 2345, 2349
CaiI CAGNNNCTG 1 cut(s) 280
CfoI GCGC 1 cut(s) 373
Cfr13I GGNCC 2 cut(s) 758, 921
ClaI ATCGAT 1 cut(s) 484
Csp6I GTAC 6 cut(s) 31, 177, 427, 675, 1602, 1637
CviQI GTAC 6 cut(s) 31, 177, 427, 675, 1602, 1637
DdeI CTNAG 9 cut(s) 6, 273, 621, 965, 1462, 1946, 2048, 2081, 2330
DraI TTTAAA 3 cut(s) 804, 955, 2184
EaeI YGGCCR 1 cut(s) 331
Eam1104I CTCTTC 8 cut(s) 232, 311, 541, 978, 1170, 1248, 1860, 2088
EarI CTCTTC 8 cut(s) 232, 311, 541, 978, 1170, 1248, 1860, 2088
Ecl136II GAGCTC 3 cut(s) 225, 272, 1950
Eco130I CCWWGG 2 cut(s) 512, 1539
Eco147I AGGCCT 1 cut(s) 847
Eco24I GRGCYC 4 cut(s) 227, 274, 990, 1952
Eco47I GGWCC 2 cut(s) 758, 921
Eco47III AGCGCT 1 cut(s) 372
Eco53kI GAGCTC 3 cut(s) 225, 272, 1950
Eco57I CTGAAG 1 cut(s) 1953
Eco81I CCTNAGG 1 cut(s) 6
EcoICRI GAGCTC 3 cut(s) 225, 272, 1950
EcoO109I RGGNCCY 1 cut(s) 921
EcoRI GAATTC 1 cut(s) 2167
EcoRII CCWGG 1 cut(s) 299
EcoT14I CCWWGG 2 cut(s) 512, 1539
EcoT22I ATGCAT 1 cut(s) 2074
EcoT38I GRGCYC 4 cut(s) 227, 274, 990, 1952
ErhI CCWWGG 2 cut(s) 512, 1539
FaqI GGGAC 1 cut(s) 471
FbaI TGATCA 4 cut(s) 325, 570, 1065, 1797
Fnu4HI GCNGC 3 cut(s) 106, 1235, 1446
FokI GGATG 4 cut(s) 94, 1162, 2030, 2477
FriOI GRGCYC 4 cut(s) 227, 274, 990, 1952
Fsp4HI GCNGC 3 cut(s) 106, 1235, 1446
FspBI CTAG 6 cut(s) 264, 720, 1275, 1845, 2177, 2201
GlaI GCGC 1 cut(s) 372
GluI GCNGC 3 cut(s) 106, 1235, 1446
GsuI CTGGAG 2 cut(s) 1566, 2013
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 3 cut(s) 333, 847, 868
HapII CCGG 2 cut(s) 464, 2460
HhaI GCGC 1 cut(s) 373
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 1453
HindII GTYRAC 1 cut(s) 1453
HindIII AAGCTT 5 cut(s) 417, 1131, 1371, 2223, 2345
HpaI GTTAAC 1 cut(s) 1453
HpaII CCGG 2 cut(s) 464, 2460
HphI GGTGA 8 cut(s) 174, 580, 833, 886, 1055, 2051, 2366, 2483
Hpy166II GTNNAC 6 cut(s) 116, 1052, 1315, 1390, 1453, 2198
Hpy8I GTNNAC 6 cut(s) 116, 1052, 1315, 1390, 1453, 2198
HpyCH4III ACNGT 9 cut(s) 14, 426, 674, 1495, 1606, 1636, 2029, 2189, 2236
HpyCH4IV ACGT 1 cut(s) 1627
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 1069
HpyF3I CTNAG 9 cut(s) 6, 273, 621, 965, 1462, 1946, 2048, 2081, 2330
HpySE526I ACGT 1 cut(s) 1627
HspAI GCGC 1 cut(s) 371
Ksp22I TGATCA 4 cut(s) 325, 570, 1065, 1797
KspAI GTTAAC 1 cut(s) 1453
LguI GCTCTTC 2 cut(s) 232, 978
LmnI GCTCC 9 cut(s) 269, 368, 556, 1211, 1289, 1705, 1715, 1835, 1955
Lsp1109I GCAGC 3 cut(s) 117, 1246, 1432
LweI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2081
MaeI CTAG 6 cut(s) 264, 720, 1275, 1845, 2177, 2201
MaeII ACGT 1 cut(s) 1627
MaeIII GTNAC 8 cut(s) 50, 434, 1395, 1528, 1606, 2247, 2336, 2486
MfeI CAATTG 3 cut(s) 1056, 1113, 1410
MflI RGATCY 3 cut(s) 95, 1431, 1886
MhlI GDGCHC 5 cut(s) 227, 274, 990, 1905, 1952
MlsI TGGCCA 1 cut(s) 333
MluNI TGGCCA 1 cut(s) 333
MlyI GAGTC 4 cut(s) 397, 1573, 1796, 2092
MmeI TCCRAC 3 cut(s) 2268, 2370, 2423
Mox20I TGGCCA 1 cut(s) 333
Mph1103I ATGCAT 1 cut(s) 2074
MroXI GAANNNNTTC 1 cut(s) 1034
MscI TGGCCA 1 cut(s) 333
MseI TTAA 8 cut(s) 561, 803, 926, 954, 1155, 1452, 1860, 2183
Msp20I TGGCCA 1 cut(s) 333
MspA1I CMGCKG 2 cut(s) 108, 1466
MspCI CTTAAG 3 cut(s) 560, 925, 1154
MspI CCGG 2 cut(s) 464, 2460
MspR9I CCNGG 2 cut(s) 301, 2461
MunI CAATTG 3 cut(s) 1056, 1113, 1410
Mva1269I GAATGC 1 cut(s) 1648
MvaI CCWGG 1 cut(s) 301
MwoI GCNNNNNNNGC 2 cut(s) 379, 1069
NciI CCSGG 1 cut(s) 2461
NlaIV GGNNCC 3 cut(s) 298, 1707, 1888
NmuCI GTSAC 6 cut(s) 50, 1395, 1528, 1606, 2247, 2486
NsiI ATGCAT 1 cut(s) 2074
NspI RCATGY 1 cut(s) 51
NspV TTCGAA 2 cut(s) 161, 603
PceI AGGCCT 1 cut(s) 847
PciI ACATGT 1 cut(s) 47
PciSI GCTCTTC 2 cut(s) 232, 978
PctI GAATGC 1 cut(s) 1648
PdmI GAANNNNTTC 1 cut(s) 1034
PfeI GAWTC 8 cut(s) 659, 1000, 1022, 1085, 1556, 1675, 1841, 2326
PkrI GCNGC 3 cut(s) 107, 1236, 1447
PleI GAGTC 4 cut(s) 396, 1573, 1795, 2091
PpsI GAGTC 4 cut(s) 396, 1573, 1795, 2091
PpuMI RGGWCCY 1 cut(s) 921
PscI ACATGT 1 cut(s) 47
PshAI GACNNNNGTC 1 cut(s) 2001
Psp124BI GAGCTC 3 cut(s) 227, 274, 1952
Psp1406I AACGTT 1 cut(s) 1627
Psp5II RGGWCCY 1 cut(s) 921
Psp6I CCWGG 1 cut(s) 299
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 3 cut(s) 298, 1707, 1888
PspPI GGNCC 2 cut(s) 758, 921
PspPPI RGGWCCY 1 cut(s) 921
PstI CTGCAG 1 cut(s) 1981
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 3 cut(s) 95, 1431, 1886
RsaI GTAC 6 cut(s) 32, 178, 428, 676, 1603, 1638
RsaNI GTAC 6 cut(s) 31, 177, 427, 675, 1602, 1637
SacI GAGCTC 3 cut(s) 227, 274, 1952
SapI GCTCTTC 2 cut(s) 232, 978
SaqAI TTAA 8 cut(s) 561, 803, 926, 954, 1155, 1452, 1860, 2183
SatI GCNGC 3 cut(s) 106, 1235, 1446
Sau96I GGNCC 2 cut(s) 758, 921
ScaI AGTACT 2 cut(s) 676, 1603
SchI GAGTC 4 cut(s) 397, 1573, 1796, 2092
ScrFI CCNGG 2 cut(s) 301, 2461
SduI GDGCHC 5 cut(s) 227, 274, 990, 1905, 1952
SfaNI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2081
SfcI CTRYAG 3 cut(s) 1383, 1710, 1977
SfuI TTCGAA 2 cut(s) 161, 603
SinI GGWCC 2 cut(s) 758, 921
SmlI CTYRAG 5 cut(s) 560, 691, 925, 1154, 1512
SmoI CTYRAG 5 cut(s) 560, 691, 925, 1154, 1512
SpeI ACTAGT 2 cut(s) 2176, 2200
SseBI AGGCCT 1 cut(s) 847
SsiI CCGC 3 cut(s) 108, 949, 1466
SspI AATATT 1 cut(s) 2217
SspMI CTAG 6 cut(s) 264, 720, 1275, 1845, 2177, 2201
SstI GAGCTC 3 cut(s) 227, 274, 1952
StuI AGGCCT 1 cut(s) 847
StyD4I CCNGG 2 cut(s) 299, 2459
StyI CCWWGG 2 cut(s) 512, 1539
TaaI ACNGT 9 cut(s) 14, 426, 674, 1495, 1606, 1636, 2029, 2189, 2236
TaiI ACGT 1 cut(s) 1630
TatI WGTACW 5 cut(s) 30, 176, 426, 674, 1601
TfiI GAWTC 8 cut(s) 659, 1000, 1022, 1085, 1556, 1675, 1841, 2326
Tru1I TTAA 8 cut(s) 561, 803, 926, 954, 1155, 1452, 1860, 2183
Tru9I TTAA 8 cut(s) 561, 803, 926, 954, 1155, 1452, 1860, 2183
TscAI CASTG 5 cut(s) 622, 1317, 1780, 1910, 1950
TseFI GTSAC 6 cut(s) 50, 1395, 1528, 1606, 2247, 2486
TseI GCWGC 3 cut(s) 105, 1234, 1445
Tsp45I GTSAC 6 cut(s) 50, 1395, 1528, 1606, 2247, 2486
TspDTI ATGAA 6 cut(s) 31, 180, 219, 651, 992, 2481
TspRI CASTG 5 cut(s) 622, 1317, 1780, 1910, 1950
Vha464I CTTAAG 3 cut(s) 560, 925, 1154
VpaK11BI GGWCC 2 cut(s) 758, 921
XapI RAATTY 3 cut(s) 157, 2054, 2167
XbaI TCTAGA 2 cut(s) 263, 1844
XceI RCATGY 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 1034
XspI CTAG 6 cut(s) 264, 720, 1275, 1845, 2177, 2201
ZrmI AGTACT 2 cut(s) 676, 1603
Zsp2I ATGCAT 1 cut(s) 2074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.